NO03G05340, NO03G05340 (gene) Nannochloropsis oceanica

Overview
NameNO03G05340
Unique NameNO03G05340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3261
Alignment locationchr3:1524814..1528074 +

Link to JBrowse

Properties
Property NameValue
DescriptionBeta--endoglucanase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1524814..1528074 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR0089286-hairpin_glycosidase-like
IPR001701Glyco_hydro_9
Homology
BLAST of NO03G05340 vs. NCBI_GenBank
Match: EWM29977.1 (beta- -endoglucanase [Nannochloropsis gaditana])

HSP 1 Score: 653.7 bits (1685), Expect = 4.400e-184
Identity = 306/394 (77.66%), Postives = 347/394 (88.07%), Query Frame = 0
Query:   52 SALFLVGLIALTVVSPIHAALTPDTKLTPPAPLAGEPLNYGEILYLSSIFYEAQRSGALPSTNRVPWRGDSALTDGADRKVDLSGGWYDAGDHLKFAFTTAFTATTLAWSLLEFPDAYDSVNERSVMMDTIKWGLDWLLKAHHKPDALIYQVASFDDHSYWGPPETFPSTMKRPSFELNPEHPGSDIAGEVAAAFAAASLVFAESDSVYSKTLLLHARQLFDFADTHRGIGSKDFYGSTGYKDELAWAAAWLFKATGEANYLQKAEVMFDACCGGRAGTTKTDYDWGDKGAGVQLLLFHITNSQKYKVGITEYLQTWLKKPKTPKGLTFYSPWGSNRYTANTAFIALMAASYGLGPEGLYVRWAQKEIDYILTAGGKVNQKSGRPEYSYVIGFG 446
            S LF+    +++V S      + +T+L+PP  +A EPLNYGE+LYLSS+FYEAQR+GALPS+NR+PWRGDSAL DG+D+ +DLSGGWYDAGDHLKFA TT FT +TLAWSLLEFPDAYDSVNERSVMMDTIKWGLDWLLKAH+KPDAL+YQ+ASFDDHSYWGPPE FP  MKRPSFE+NP+HPGSDIAGEV+AAFAAASLVFAESDSVYS TLL+HARQLFDFAD HRGIGSKDFYGSTGY DELAWAA WLFKATGEA+YL KAE  FDACCGG+ GTTK DYDWG+KG GVQL+L+H+T ++KY+ GIT YLQTWLKKPKTPKGLTF+SPWGSNRYTANTAFIALMAA+YGL P   Y  WA+ EI YILTAGGKVN  +G+P+YSY+IGFG
Sbjct:    6 SLLFVALATSVSVTSS-----SSNTRLSPPKAIADEPLNYGEVLYLSSLFYEAQRAGALPSSNRIPWRGDSALKDGSDKGLDLSGGWYDAGDHLKFALTTGFTVSTLAWSLLEFPDAYDSVNERSVMMDTIKWGLDWLLKAHYKPDALVYQIASFDDHSYWGPPEAFPKKMKRPSFEINPKHPGSDIAGEVSAAFAAASLVFAESDSVYSHTLLVHARQLFDFADKHRGIGSKDFYGSTGYLDELAWAAVWLFKATGEADYLHKAEKFFDACCGGKDGTTKVDYDWGEKGPGVQLMLYHLTQAEKYRQGITNYLQTWLKKPKTPKGLTFFSPWGSNRYTANTAFIALMAATYGLNP-SKYSAWAESEITYILTAGGKVNPDTGKPKYSYLIGFG 393          
BLAST of NO03G05340 vs. NCBI_GenBank
Match: EWM26157.1 (beta- -endoglucanase [Nannochloropsis gaditana])

HSP 1 Score: 366.3 bits (939), Expect = 1.400e-97
Identity = 192/394 (48.73%), Postives = 259/394 (65.74%), Query Frame = 0
Query:   59 LIALTVVSPIHAALTPDTK-LTPPAPLAGEPLNYGEILYLSSIFYEAQRSGALPSTNRVPWRGDSALTDGADRKVDLSGGWYDAGDHLKFAFTTAFTATTLAWSLLEFPDAYDSVNERSVMMDTIKWGLDWLLKAHHKPDALIYQVASFD-DHSYWGPPETFPSTMKRPSFELNPEHPGSDIAGEVAAAFAAASLVFAESDSVYSKTLLLHARQLFDFADTHRGIG--SKDFYGS-TGYKDELAWAAAWLFKATGEANYLQKAE-VMFDACCGGRAGTTKTDYDWGDKGAGVQLLLFHITNSQKYKVGITEYLQTWL-KKPKTPKGLTFYSPWGSNRYTANTAFIALMAASYGLGPEGLYVRWAQKEIDYILTAGGKVNQKSGRPEYSYVIGFG 446
            L+AL + +  +   + + K L   A   G  L+Y + + L+++FYEAQRSG LPS NR+PWRGDSAL+DG D  +DL+GGWYDAGDH+KF F  A++ATTL W +LEF DA+    E   ++DT+KW LD+LLK H   D    QV   + DHSYWG  E+    M RPSF + P +PG++ A E AAA AA S++F E D+ YS  L   AR LF+ AD +RG    S  FY S +GY DEL WAA WL+KAT +A YL+ AE   +D CC   A T KT++ W  K + VQL+L+ +T  +KY  G   ++ +W+ + P+TPKGL F+  W  NRY+ANTAF+AL+AA +GL P   Y+ +A+ +IDYIL AGG +N ++ +P YSY IGFG
Sbjct:   10 LVALLLFAVSYGTRSIEAKSLRSSAKENGIELDYPKAMKLTTLFYEAQRSGKLPSDNRIPWRGDSALSDGQDHGLDLTGGWYDAGDHVKFNFPMAWSATTLIWGVLEFGDAWKKTGEMKNILDTVKWPLDYLLKCHPNEDTYYVQVGDGNADHSYWGAAESL--NMNRPSFAITPNNPGTEFAAEGAAALAAGSILF-EDDTAYSALLKAKARSLFELADKNRGSSDISSPFYKSYSGYWDELGWAAVWLYKATKDAKYLEMAENDYYDNCC---AVTNKTEFSWDRKSSAVQLILYDLTKKEKYADGFAGFMDSWMYETPRTPKGLVFFDKWAPNRYSANTAFLALVAAKHGLVPT-TYIAFAKSQIDYILKAGGDINPETKQPYYSYQIGFG 396          
BLAST of NO03G05340 vs. NCBI_GenBank
Match: XP_005855791.1 (beta- -endoglucanase [Nannochloropsis gaditana CCMP526] >EKU20567.1 beta- -endoglucanase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 332.0 bits (850), Expect = 2.900e-87
Identity = 177/367 (48.23%), Postives = 235/367 (64.03%), Query Frame = 0
Query:   85 AGEPLNYGEILYLSSIFYEAQRSGALPSTNRVPWRGDSALTDGADRKVDLSGGWYDAGDHLKFAFTTAFTATTLAWSLLEFPDAYDSVNERSVMMDTIKWGLDWLLKAHHKPDALIYQVASFD-DHSYWGPPETFPSTMKRPSFEL-NPEHPGSDIAGEVAAAFAAASLVF-AESDSVYSKTLLLHARQLFDFADTHRG--IGSKDFYGSTGYKDELAWAAAWLFKATGEANYLQKAEVMFDACCGGRAGTTKTDYDWGDKGAGVQLLLFHITNSQKYKVGITEYLQTWLKKPKTPKGLTFYSPWGSNRYTANTAFIALMAASYGLGPEGLYVRWAQKEIDYIL-TAGGKVNQKSGRPEYSYVIGFG 446
            AGE  NYG ++ LS +FYEAQRSG LP++NR+PWRGDSAL DG D  +DL+GGWYDAGDH+KF F  A++ATTLAW + E+ DA+    E S  +D +KW  D+L+K H  PD    QV + + DH YWG  E+   TM RPS+ +      GS   GE AAA AA S++F  + DSVY+  L+  A+ LF   D ++G    S+ FY S+G++DELAW AAWL++ATGE  YL KAE ++   C G A +    Y W  K  GVQLLL+  T   +YK   + ++   + K +TPKGL ++  WGSNRY AN AFIAL+AA YG+  E     WA ++I Y+L  A G +N  +G P +SYV G+G
Sbjct:   71 AGEKYNYGHVMGLSLLFYEAQRSGPLPASNRIPWRGDSALEDGKDVNLDLTGGWYDAGDHVKFNFPMAWSATTLAWGVHEYWDAWKKAGELSNALDQLKWVADYLVKCHPDPDTYYVQVGNGNSDHGYWGTAESM--TMSRPSYAVGRGREAGSAAIGEAAAALAAISVLFKQQGDSVYAAHLIDTAKSLFALGDGNQGGFSVSQPFYSSSGFRDELAWGAAWLYEATGEQEYLDKAESLYAGGCCGSAWS----YSWDAKAPGVQLLLYKHTRKSQYKTDSSNFVGGAIGKGQTPKGLAYWDKWGSNRYAANGAFIALVAADYGIHVEDGRA-WAMQQIHYMLGDAHGGINNATGLPFFSYVCGYG 430          
BLAST of NO03G05340 vs. NCBI_GenBank
Match: EWM20555.1 (beta- -endoglucanase [Nannochloropsis gaditana])

HSP 1 Score: 332.0 bits (850), Expect = 2.900e-87
Identity = 177/367 (48.23%), Postives = 235/367 (64.03%), Query Frame = 0
Query:   85 AGEPLNYGEILYLSSIFYEAQRSGALPSTNRVPWRGDSALTDGADRKVDLSGGWYDAGDHLKFAFTTAFTATTLAWSLLEFPDAYDSVNERSVMMDTIKWGLDWLLKAHHKPDALIYQVASFD-DHSYWGPPETFPSTMKRPSFEL-NPEHPGSDIAGEVAAAFAAASLVF-AESDSVYSKTLLLHARQLFDFADTHRG--IGSKDFYGSTGYKDELAWAAAWLFKATGEANYLQKAEVMFDACCGGRAGTTKTDYDWGDKGAGVQLLLFHITNSQKYKVGITEYLQTWLKKPKTPKGLTFYSPWGSNRYTANTAFIALMAASYGLGPEGLYVRWAQKEIDYIL-TAGGKVNQKSGRPEYSYVIGFG 446
            AGE  NYG ++ LS +FYEAQRSG LP++NR+PWRGDSAL DG D  +DL+GGWYDAGDH+KF F  A++ATTLAW + E+ DA+    E S  +D +KW  D+L+K H  PD    QV + + DH YWG  E+   TM RPS+ +      GS   GE AAA AA S++F  + DSVY+  L+  A+ LF   D ++G    S+ FY S+G++DELAW AAWL++ATGE  YL KAE ++   C G A +    Y W  K  GVQLLL+  T   +YK   + ++   + K +TPKGL ++  WGSNRY AN AFIAL+AA YG+  E     WA ++I Y+L  A G +N  +G P +SYV G+G
Sbjct:   71 AGEKYNYGHVMGLSLLFYEAQRSGPLPASNRIPWRGDSALEDGKDVNLDLTGGWYDAGDHVKFNFPMAWSATTLAWGVHEYWDAWKKAGELSNALDQLKWVADYLVKCHPDPDTYYVQVGNGNSDHGYWGTAESM--TMSRPSYAVGRGREAGSAAIGEAAAALAAISVLFKQQGDSVYAAHLIDTAKSLFALGDGNQGGFSVSQPFYSSSGFRDELAWGAAWLYEATGEQEYLDKAESLYAGGCCGSAWS----YSWDAKAPGVQLLLYKHTRKSQYKTDSSNFVGGAIGKGQTPKGLAYWDKWGSNRYAANGAFIALVAADYGIHVEDGRA-WAMQQIHYMLGDAHGGINNATGLPFFSYVCGYG 430          
BLAST of NO03G05340 vs. NCBI_GenBank
Match: XP_006813668.1 (PREDICTED: endoglucanase 5-like [Saccoglossus kowalevskii])

HSP 1 Score: 326.6 bits (836), Expect = 1.200e-85
Identity = 183/406 (45.07%), Postives = 244/406 (60.10%), Query Frame = 0
Query:   50 VSSALFLVGLIALTVVSPIHAALTPDTKLTPPAPLAGEPLNYGEILYLSSIFYEAQRSGALPSTNRVPWRGDSALTDGADRKVDLSGGWYDAGDHLKFAFTTAFTATTLAWSLLEFPDAYDSVNERSVMMDTIKWGLDWLLKAHHKPDALIYQVASFD-DHSYWGPPETFPSTMKRPSFELNPEHPGSDIAGEVAAAFAAASLVFAESDSVYSKTLLLHARQLFDFADTHRGIGSKDF------YGSTGYKDELAWAAAWLFKATGEANYLQKAEVMFDACCGGRAGTTKTDYDWGDKGAGVQLLLFHITNSQKYKVGITEYLQTWL---KKPKTPKGLTFYSPWGSNRYTANTAFIALMAASYGLGPEGLYVRWAQKEIDYILTAGGKVNQKSGRPEYSYVIGFG 446
            +++   LVG+I + VV     + T ++  T        P NY E+++ S +FYEAQRSG LP TNR+P+RGDSAL D      DL+GGWYDAGDH+K  F  AF+   L+W  LEF DAY+   E   M+D I+WG D+LLKAH  P+ L  Q+A    DH YWG PE    TM R SF++  E PGSD+AGEV+AA AAAS++FA+SD  Y+  LL  +++LFDFAD +RG+ +  F      Y  + Y+DE+AWAA WL+KATGE  YL K E       GGR+      + W    AGV  LL+++T  + YK  +  YL  WL       TPKGL F + WGS RY ++TAFIAL+AA   + P   Y ++A+ +++YIL   G+          SYV GFG
Sbjct:   47 IATTTTLVGIITVAVV----VSTTGESVET--------PYNYSEVIHKSILFYEAQRSGTLPPTNRIPYRGDSALDDMGLNGEDLTGGWYDAGDHIKSTFPMAFSVAVLSWGYLEFKDAYEEAGETQNMLDCIRWGTDFLLKAHTAPNELYVQIAKKSVDHEYWGRPEEM--TMNRTSFKVTTETPGSDVAGEVSAALAAASIIFADSDPDYANQLLNESKELFDFADNYRGLYADSFPEPPVYYRGSKYEDEIAWAAIWLYKATGEEVYLNKTENEIPNMTGGRSWA----FAWSQVDAGVHTLLYNLTGDKYYKNRVMRYLDEWLPGNAMSYTPKGLAFRNEWGSLRYASSTAFIALVAAETRIRPTP-YRQFAKDQLNYILGDTGR----------SYVCGFG 423          
BLAST of NO03G05340 vs. NCBI_GenBank
Match: XP_020893295.1 (uncharacterized protein LOC110232439 [Exaiptasia pallida] >KXJ18455.1 Endoglucanase A [Exaiptasia pallida])

HSP 1 Score: 321.6 bits (823), Expect = 4.000e-84
Identity = 177/404 (43.81%), Postives = 240/404 (59.41%), Query Frame = 0
Query:   54 LFLVGLIALTVVSPIHAALTPD-TKLTPPAPLAGEPLNYGEILYLSSIFYEAQRSGALPSTNRVPWRGDSALTDGADRKVDLSGGWYDAGDHLKFAFTTAFTATTLAWSLLEFPDAYDSVNERSVMMDTIKWGLDWLLKAHHKPDALIYQVASFD-DHSYWGPPETFPSTMKRPSFELNPEHPGSDIAGEVAAAFAAASLVFAESDSVYSKTLLLHARQLFDFADTHRG------IGSKDFYGS-TGYKDELAWAAAWLFKATGEANYLQKAEVMFDACCGGRAGTTKTDYDWGDKGAGVQLLLFHITNSQKYKVGITEYLQTWL---KKPKTPKGLTFYSPWGSNRYTANTAFIALMAASYGLGPEGLYVRWAQKEIDYILTAGGKVNQKSGRPEYSYVIGFG 446
            L+LV LI       +HA+  P  TK +       +  +Y ++L+ S +FYEAQRSG LPSTNR+PWRGDSAL D      DL+GGWYDAGD +KF F  A + T LAW ++E+ DAY +  E   ++D+IKW  D+ +KAH        QV + D DH+YWG PE     MKRP++++    PGSD+A E AAA AA S+ F  +D  Y+  LL HA++L+DFAD +RG      + +  FY S +GY DEL W AAWL++AT   NYL+KAE  +              + W +K AGVQ+LL  IT    YK  + EYL +WL       TPKGL + + WG NRY ANTAF+AL+AA+ G+ P   Y  +A+K+I Y+L   G+          S+++GFG
Sbjct:    2 LYLVFLIV------VHASFKPTLTKKSKIDDFLSKSYDYDQVLHDSILFYEAQRSGKLPSTNRIPWRGDSALNDKGQNGQDLTGGWYDAGDFVKFGFPMASSVTVLAWGVVEYRDAYKAAGELDNVLDSIKWATDYFIKAHTAKFEFYGQVGNGDIDHAYWGRPEDM--KMKRPAYKITESKPGSDLAAETAAALAATSMAFKSTDRQYANKLLQHAKELYDFADKYRGKYSDSILDAAXFYKSYSGYNDELVWGAAWLYRATXNVNYLKKAEAYYKTF---GMSDKPWAFSWDEKTAGVQVLLAEITGKNSYKKDVQEYLDSWLPGNDVKYTPKGLAWRAKWGPNRYAANTAFLALLAANNGMKPND-YRTFAKKQIHYMLGDSGQ----------SFLVGFG 383          
BLAST of NO03G05340 vs. NCBI_GenBank
Match: XP_006822161.1 (PREDICTED: endoglucanase 11-like [Saccoglossus kowalevskii])

HSP 1 Score: 320.1 bits (819), Expect = 1.200e-83
Identity = 178/406 (43.84%), Postives = 240/406 (59.11%), Query Frame = 0
Query:   50 VSSALFLVGLIALTVVSPIHAALTPDTKLTPPAPLAGEPLNYGEILYLSSIFYEAQRSGALPSTNRVPWRGDSALTDGADRKVDLSGGWYDAGDHLKFAFTTAFTATTLAWSLLEFPDAYDSVNERSVMMDTIKWGLDWLLKAHHKPDALIYQVASFD-DHSYWGPPETFPSTMKRPSFELNPEHPGSDIAGEVAAAFAAASLVFAESDSVYSKTLLLHARQLFDFADTHRGIGSKDF------YGSTGYKDELAWAAAWLFKATGEANYLQKAEVMFDACCGGRAGTTKTDYDWGDKGAGVQLLLFHITNSQKYKVGITEYLQTWL---KKPKTPKGLTFYSPWGSNRYTANTAFIALMAASYGLGPEGLYVRWAQKEIDYILTAGGKVNQKSGRPEYSYVIGFG 446
            +++A+F++ +I   VV+     ++  T             +Y E+++ S +FYEAQRSG LP TNR+P+RGDSAL D      DL+GGWYDAGDH+K  F  AF+   L W  LEF DAY+   E   M+D I+WG D+LLKAH  P+ L  Q+A    DH YWG PE    TM R SF++  E PGSD+AGEV+AA AAAS++FA+SD  Y+  LL  +++LF FAD +RG     F      Y  + Y+DE+AWAA WL+KATGE  YL K+E       GGR+      + W    AGV  LL+++T +  YK  +T Y+  WL     P TPKGL F + WGS RY ++TAFIAL+AA   +     Y ++A+ ++ YIL   G+          SYV GFG
Sbjct:  323 IAAAIFILSIIIAVVVATSGDTVSLKTS-----------YDYSEVIHKSILFYEAQRSGVLPETNRIPYRGDSALDDKGVNGEDLTGGWYDAGDHIKSTFPMAFSVAVLTWGYLEFKDAYEEAGETQNMLDCIRWGTDFLLKAHTAPNELYVQIAKKSVDHGYWGRPEEM--TMNRTSFKVTTETPGSDVAGEVSAALAAASIIFADSDPDYANQLLDESKELFHFADNYRGFYKDSFPEPPVYYRGSKYEDEIAWAAIWLYKATGEEVYLNKSENEIPNMIGGRSWA----FGWSQVDAGVHTLLYNLTGNSYYKKRVTRYVDEWLPGNAMPYTPKGLAFRNYWGSLRYASSTAFIALVAAESRV-RRTPYRQFAKDQLHYILGDTGR----------SYVCGFG 700          
BLAST of NO03G05340 vs. NCBI_GenBank
Match: XP_020614867.1 (uncharacterized protein LOC110053019 [Orbicella faveolata])

HSP 1 Score: 319.7 bits (818), Expect = 1.500e-83
Identity = 173/367 (47.14%), Postives = 226/367 (61.58%), Query Frame = 0
Query:   90 NYGEILYLSSIFYEAQRSGALPSTNRVPWRGDSALTDGADRKVDLSGGWYDAGDHLKFAFTTAFTATTLAWSLLEFPDAYDSVNERSVMMDTIKWGLDWLLKAHHKPDALIYQVA-SFDDHSYWGPPETFPSTMKRPSFELNPEHPGSDIAGEVAAAFAAASLVFAESDSVYSKTLLLHARQLFDFADTHRGI------GSKDFYGS-TGYKDELAWAAAWLFKATGEANYLQKAEVMFDACCGGRAGTTKTDYDWGDKGAGVQLLLFHITNSQKYKVGITEYLQTWLKKPK---TPKGLTFYSPWGSNRYTANTAFIALMAASYGLGPEGLYVRWAQKEIDYILTAGGKVNQKSGRPEYSYVIGFG 446
            +Y  +L+ S +FYEAQRSG LP +NRVPWR DSAL D      DLSGGWYDAGD++KF F  AF+ T L+W L+E+ DAY    E + M+D IKW LD+ +KAH K +    QV     DH+YWG PE    TM RP++++ P+ PGSD+A E AAA AAAS+ F  SD  YS  LL HA  L++FAD +RG+       +  FY S +GYKDEL W AAWL+KAT +  YL KAE  +     G  G     + W DK AGVQ+LL  IT    YK  +  ++ +WL   +   TPKGL +   WG NRY+ANTAF+AL+AA  G+ P   +  +A+K+I Y+L   G+          S+V+GFG
Sbjct:  370 DYDSVLHDSILFYEAQRSGKLPISNRVPWRKDSALNDRGQNGEDLSGGWYDAGDYVKFGFPMAFSVTMLSWGLVEYRDAYVDAGELNYMLDCIKWPLDYFMKAHIKQEEFYGQVGDGHTDHAYWGRPEDM--TMARPAWKITPQKPGSDLAAETAAALAAASIAFRFSDVSYSMKLLQHAADLYEFADKYRGVYSDSIPNAASFYRSFSGYKDELVWGAAWLYKATKDKKYLTKAEQYYKQF--GMNGKPWA-FSWDDKKAGVQVLLAEITKKASYKQAVDTFITSWLPGHEVHYTPKGLAWRDQWGPNRYSANTAFLALVAADQGVKPSA-FREFAKKQIHYMLGDSGR----------SFVVGFG 720          
BLAST of NO03G05340 vs. NCBI_GenBank
Match: KXJ18436.1 (Endoglucanase A [Exaiptasia pallida])

HSP 1 Score: 315.8 bits (808), Expect = 2.200e-82
Identity = 170/367 (46.32%), Postives = 225/367 (61.31%), Query Frame = 0
Query:   91 YGEILYLSSIFYEAQRSGALPSTNRVPWRGDSALTDGADRKVDLSGGWYDAGDHLKFAFTTAFTATTLAWSLLEFPDAYDSVNERSVMMDTIKWGLDWLLKAHHKPDALIYQVA-SFDDHSYWGPPETFPSTMKRPSFELNPEHPGSDIAGEVAAAFAAASLVFAESDSVYSKTLLLHARQLFDFADTHRG------IGSKDFYGS-TGYKDELAWAAAWLFKATGEANYLQKAEVMFDAC-CGGRAGTTKTDYDWGDKGAGVQLLLFHITNSQKYKVGITEYLQTWL---KKPKTPKGLTFYSPWGSNRYTANTAFIALMAASYGLGPEGLYVRWAQKEIDYILTAGGKVNQKSGRPEYSYVIGFG 446
            Y ++L+ S +FYEAQRSG LPSTNR+PWRGDSAL D      DL+GGWYDAGD +KF F  A + T LAW ++E+ DAY +  E   ++D+IKW  D+ +KAH        QV     DH+YWG PE    TMKRP+F++    PGS++A E AAA AA S+ F +++  Y+  L+ HA +L++FAD +RG        +  FY S +GY DEL W AAWL++AT +A YL KAE  +      G+A T    + W DK AG QLLL  IT    YK  I  YL +WL       TPKGL +   WG NRY+ANTAF+AL+AA  GL P+ +Y  +A+K+I Y+L   G+          S+V+GFG
Sbjct:  425 YDQVLHDSILFYEAQRSGKLPSTNRIPWRGDSALNDKGQNGQDLTGGWYDAGDFVKFGFPMASSVTVLAWGVVEYRDAYKAAGELDNVLDSIKWATDYFIKAHTAKFEFYGQVGDGHVDHAYWGRPEEM--TMKRPAFKIXTXKPGSELAAETAAALAATSMAFQQTNPSYANKLIKHAEELYEFADKYRGKYSDSITNAASFYKSFSGYNDELVWGAAWLYRATNKAEYLSKAESYYQQFNMNGKAWT----FSWDDKKAGAQLLLAEITGKSNYKNDIKGYLDSWLPGRDVKYTPKGLAWRDQWGPNRYSANTAFLALVAADNGLKPD-IYRNFAKKQIHYMLGDSGR----------SFVVGFG 774          
BLAST of NO03G05340 vs. NCBI_GenBank
Match: XP_020893299.1 (uncharacterized protein LOC110232443 [Exaiptasia pallida])

HSP 1 Score: 315.8 bits (808), Expect = 2.200e-82
Identity = 170/367 (46.32%), Postives = 225/367 (61.31%), Query Frame = 0
Query:   91 YGEILYLSSIFYEAQRSGALPSTNRVPWRGDSALTDGADRKVDLSGGWYDAGDHLKFAFTTAFTATTLAWSLLEFPDAYDSVNERSVMMDTIKWGLDWLLKAHHKPDALIYQVA-SFDDHSYWGPPETFPSTMKRPSFELNPEHPGSDIAGEVAAAFAAASLVFAESDSVYSKTLLLHARQLFDFADTHRG------IGSKDFYGS-TGYKDELAWAAAWLFKATGEANYLQKAEVMFDAC-CGGRAGTTKTDYDWGDKGAGVQLLLFHITNSQKYKVGITEYLQTWL---KKPKTPKGLTFYSPWGSNRYTANTAFIALMAASYGLGPEGLYVRWAQKEIDYILTAGGKVNQKSGRPEYSYVIGFG 446
            Y ++L+ S +FYEAQRSG LPSTNR+PWRGDSAL D      DL+GGWYDAGD +KF F  A + T LAW ++E+ DAY +  E   ++D+IKW  D+ +KAH        QV     DH+YWG PE    TMKRP+F++    PGS++A E AAA AA S+ F +++  Y+  L+ HA +L++FAD +RG        +  FY S +GY DEL W AAWL++AT +A YL KAE  +      G+A T    + W DK AG QLLL  IT    YK  I  YL +WL       TPKGL +   WG NRY+ANTAF+AL+AA  GL P+ +Y  +A+K+I Y+L   G+          S+V+GFG
Sbjct:  400 YDQVLHDSILFYEAQRSGKLPSTNRIPWRGDSALNDKGQNGQDLTGGWYDAGDFVKFGFPMASSVTVLAWGVVEYRDAYKAAGELDNVLDSIKWATDYFIKAHTAKFEFYGQVGDGHVDHAYWGRPEEM--TMKRPAFKIXTXKPGSELAAETAAALAATSMAFQQTNPSYANKLIKHAEELYEFADKYRGKYSDSITNAASFYKSFSGYNDELVWGAAWLYRATNKAEYLSKAESYYQQFNMNGKAWT----FSWDDKKAGAQLLLAEITGKSNYKNDIKGYLDSWLPGRDVKYTPKGLAWRDQWGPNRYSANTAFLALVAADNGLKPD-IYRNFAKKQIHYMLGDSGR----------SFVVGFG 749          
The following BLAST results are available for this feature:
BLAST of NO03G05340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29977.14.400e-18477.66beta- -endoglucanase [Nannochloropsis gaditana][more]
EWM26157.11.400e-9748.73beta- -endoglucanase [Nannochloropsis gaditana][more]
XP_005855791.12.900e-8748.23beta- -endoglucanase [Nannochloropsis gaditana CCM... [more]
EWM20555.12.900e-8748.23beta- -endoglucanase [Nannochloropsis gaditana][more]
XP_006813668.11.200e-8545.07PREDICTED: endoglucanase 5-like [Saccoglossus kowa... [more]
XP_020893295.14.000e-8443.81uncharacterized protein LOC110232439 [Exaiptasia p... [more]
XP_006822161.11.200e-8343.84PREDICTED: endoglucanase 11-like [Saccoglossus kow... [more]
XP_020614867.11.500e-8347.14uncharacterized protein LOC110053019 [Orbicella fa... [more]
KXJ18436.12.200e-8246.32Endoglucanase A [Exaiptasia pallida][more]
XP_020893299.12.200e-8246.32uncharacterized protein LOC110232443 [Exaiptasia p... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005336NSK005336Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05340.1NO03G05340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G05340.2NO03G05340.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G05340.3NO03G05340.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573309gene_1750Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100360g3gene665Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05340.1NO03G05340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G05340.2NO03G05340.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G05340.3NO03G05340.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05340 ID=NO03G05340|Name=NO03G05340|organism=Nannochloropsis oceanica|type=gene|length=3261bp
CGACACTTGGTGTTCCACGGACCCTCTGCAAGCTTTATATTCTCCTGAAA
TCTCATCTTGAGAAACTTTTTTAATGTCTTGCTACGTGTTTAACTCTATC
TCGCCCATGCCTCTGCCTCGCTGCACGTTAACCAGGCCTCGCCAAAGACC
AAGGCTTCGACACGATTCTGTCACCAAGACTCACTCCCCCGCTTCCCGTT
ATTTGTTCCATAGCCTCGCATTTCTTGGATCAGGCTACTCCTGAGACCTG
GCCTGCCTGGGTAGATGCTATATGCAATGCACAAACATCTCGCGCAAATT
AAATACTCACCACACAAAATCTCTCCCTTTCTACAGACACGGCGTGTGGT
ATACGTGCAGTCCTCCTGGAGTGTCCCCTCCAGCAAGCATCCATCCACAA
TGCGGGCCACCGTTTCTTCCGCCCTATTCCTGGTGGGTCTCATTGCCTTG
ACTGTGGTCAGTCCCATCCATGCAGCACTCACACCCGACACCAAGCTCAC
TCCCCCTGCACCTCTTGCTGGCGAACgtaagtggctagctagtttagggg
aacgagtgacaccgccatgacaggcttcaggtggaagtgctgaggagaag
gaagaaaatgaacgaggacacatggtcaccttgcaaataatacaacaaac
acatacattctctcccatagtactccgcgtgcctacatcctctcactcct
cctaatccctccttttcccctccctcctcctccccagCGCTGAACTACGG
CGAGATCCTCTACCTTTCCTCGATCTTCTACGAAGCTCAACGCTCGGGCG
CCCTGCCTAGCACCAACCGCGTGCCCTGGCGTGGCGACTCGGCCCTAACA
GATGGAGCGGACAGGAAAGTGGACTTGAGCGGCGGCTGGTACGACGCAGG
TGACCACTTGAAGTTCGCATTTACCACGGCATTCACCGCAACTACCCTGG
CATGGTCCTTGTTGGAGTTTCCTGATGCCTATGACTCTGTGAATGgtatg
ttggggagggaggcgggagcggtaatgtcaatgcgacagatttgtttgat
tacttggtttagcccacggcttgtgtcttaccctcccccttcatcctcac
atcctttctctccactccagAACGGTCCGTGATGATGGATACTATCAAAT
GGGGCCTCGACTGGCTCCTCAAAGCCCACCACAAGCCCGATGCCCTCATC
TACCAAGTTGCCTCCTTCGACGACCATTCATACTGGGGGCCTCCGGAGAC
GTTTCCCTCCACTATGAAACGCCCTTCTTTTGAACTAAATCCTGAGCACC
CCGGCTCGGATATCGCGGGGGAGGTCGCTGCTGCCTTTGCAGCGGCTTCA
TTAGTCTTTGCCGAGTCGGACTCGGTGTACTCCAAGACATTGTTACTCCA
TGCCCGGCAGCTGTTTGATTTTGCGGACACGCATCGGGGTATTGGGAGCA
AGGATTTTTACGGGTCCACTGGCTACAAGGACGAGTTGGCGTGGGCTGCG
GCATGGCTGTTCAAGGCGACAGGAGAGGCGAATTACCTCCAGAAAGCCGA
GGTGATGTTTGATGCTTGCTGTGGTGGGCGCGCGGGCACGACCAAGACGG
ACTACGACTGGGGGGATAAGGGAGCTGGGGTGCAGCTACTCCTCTTCCAC
ATCACCAATTCTCAGAAATACAAGGTAGGAATCACGGAGTACCTCCAGAC
GTGGCTTAAGAAGCCCAAAACCCCCAAGGGCCTGACCTTCTACTCGCCGT
GGGGGAGCAACCGATACACGGCCAACACGGCGTTTATTGCCTTAATGGCC
GCTTCGTACGGTCTCGGCCCCGAGGGTTTGTACGTCAGGTGGGCACAGAA
GGAGATCGATTACATTTTGACGGCGGGCGGGAAGGTAAATCAGAAGAGTG
GGCGCCCGGAGTACTCGTATGTGATTGGTTTTGGgtacgtcctgggagga
gcgagggagggagggacggagggacagaggtacaggtcttcacctagaaa
ttaggttacctacccacacgtttctcaccctttctcctcttcttccttca
tcccggacactagCGAGGACTTTCCCCGCGCGCCCCACCATCGTTCCTCG
TCCTGTGACGGGGGCCACTGTGAATGTTCGACGAAACCACATCCCCATAT
GTTGTACGGCGCTTTGGTGGGTGGCCCTGGGGAGAAGGACGACTTCGTGG
ATGACTGCTCCGATTATCAGAAGAATGTACgtcgtgaggaaggggagggg
gagcaagaaaaagagggggcagagatcgaggaggaagggagaatggagtg
ctgacttgctgacttgtccttttctcctttttttccctttccacatacga
acactcacaggaaggtaaagatggtggcagaaagcgaggaaaaatggcgg
caggactgaatcgcagggaggggagaagggggggaaggggagggaataaa
tgaacggagggaaatcaggttttcctctgagtctgtgtgcccctatgaag
taactcgatggtagatctctactaccattgcgggaatcattaaccctctt
cctctcttatttccccacagTCGCTCTGGACTACAATGCGGCCTTCACGG
GGGCGTGTGCGGCGTTGCGGCACCGTTATCTCACAGGGCAGATGCCCGCC
TGATGAGAATGTTGAGAAGGAGGAGGAGAAGAAATCAGGGAAGAGAAAAT
CGCGGAAAAGAGATGAGGAGGAGGTGAAGGAGGAAATGCAAAGAAACGTT
TGTAGGTGGAAAAATGAAGAAAGAGCCCATGGAGGAGGAGAAGGATAAAT
AAATGAAGGCTGTAAAATTTAAAAAGTGCGAGAATAAGAGTACGGCACTG
TATGTATCTATCAAGGTGGATCTCCACGGCTTACGTGTATGGCTACGTGT
GCATGTGCGTCTTTGTGACACACTGTGAAGGAGCGTGGGAGAGTAGCAAG
ATTGAGAGCATTGGCCGACAGTCGATGACGGAAGGGAGGGTCTCCTTCTC
CGCAATGCCAAAAGAGGAAGGGAGGGAGGGAGTCAGTGGTGCCCTTATCT
TTTCTCCCCCTCCGCTTCCATGCATGAGTGCACTTTTCGAATTAATTTGT
TCATTTATTCACCAATTTATTCAAATGAGAGAGCAAGCTTCACAGTGGGT
CTGTGGAGGCGCATACATCAACAACAATGCCGAATGATGGTCAGAGCTTG
ATCCAAAAGGAACGGCAGAAAGGGAAAAAAACTGATAAATTTGCTATAAA
AAGAATCTCAG
back to top

protein sequence of NO03G05340.1

>NO03G05340.1-protein ID=NO03G05340.1-protein|Name=NO03G05340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=528bp
MLYAMHKHLAQIKYSPHKISPFLQTRRVVYVQSSWSVPSSKHPSTMRATV
SSALFLVGLIALTVVSPIHAALTPDTKLTPPAPLAGEPLNYGEILYLSSI
FYEAQRSGALPSTNRVPWRGDSALTDGADRKVDLSGGWYDAGDHLKFAFT
TAFTATTLAWSLLEFPDAYDSVNERSVMMDTIKWGLDWLLKAHHKPDALI
YQVASFDDHSYWGPPETFPSTMKRPSFELNPEHPGSDIAGEVAAAFAAAS
LVFAESDSVYSKTLLLHARQLFDFADTHRGIGSKDFYGSTGYKDELAWAA
AWLFKATGEANYLQKAEVMFDACCGGRAGTTKTDYDWGDKGAGVQLLLFH
ITNSQKYKVGITEYLQTWLKKPKTPKGLTFYSPWGSNRYTANTAFIALMA
ASYGLGPEGLYVRWAQKEIDYILTAGGKVNQKSGRPEYSYVIGFGEDFPR
APHHRSSSCDGGHCECSTKPHPHMLYGALVGGPGEKDDFVDDCSDYQKNV
LALDYNAAFTGACAALRHRYLTGQMPA*
back to top

protein sequence of NO03G05340.2

>NO03G05340.2-protein ID=NO03G05340.2-protein|Name=NO03G05340.2|organism=Nannochloropsis oceanica|type=polypeptide|length=468bp
MLYAMHKHLAQIKYSPHKISPFLQTRRVVYVQSSWSVPSSKHPSTMRATV
SSALFLVGLIALTVVSPIHAALTPDTKLTPPAPLAGEPLNYGEILYLSSI
FYEAQRSGALPSTNRVPWRGDSALTDGADRKVDLSGGWYDAGDHLKFAFT
TAFTATTLAWSLLEFPDAYDSVNERSVMMDTIKWGLDWLLKAHHKPDALI
YQVASFDDHSYWGPPETFPSTMKRPSFELNPEHPGSDIAGEVAAAFAAAS
LVFAESDSVYSKTLLLHARQLFDFADTHRGIGSKDFYGSTGYKDELAWAA
AWLFKATGEANYLQKAEVMFDACCGGRAGTTKTDYDWGDKGAGVQLLLFH
ITNSQKYKVGITEYLQTWLKKPKTPKGLTFYSPWGSNRYTANTAFIALMA
ASYGLGPEGLYVRWAQKEIDYILTAGGKVNQKSGRPEYSYVIGFGYVLGG
AREGGTEGQRYRSSPRN*
back to top

protein sequence of NO03G05340.3

>NO03G05340.3-protein ID=NO03G05340.3-protein|Name=NO03G05340.3|organism=Nannochloropsis oceanica|type=polypeptide|length=468bp
MLYAMHKHLAQIKYSPHKISPFLQTRRVVYVQSSWSVPSSKHPSTMRATV
SSALFLVGLIALTVVSPIHAALTPDTKLTPPAPLAGEPLNYGEILYLSSI
FYEAQRSGALPSTNRVPWRGDSALTDGADRKVDLSGGWYDAGDHLKFAFT
TAFTATTLAWSLLEFPDAYDSVNERSVMMDTIKWGLDWLLKAHHKPDALI
YQVASFDDHSYWGPPETFPSTMKRPSFELNPEHPGSDIAGEVAAAFAAAS
LVFAESDSVYSKTLLLHARQLFDFADTHRGIGSKDFYGSTGYKDELAWAA
AWLFKATGEANYLQKAEVMFDACCGGRAGTTKTDYDWGDKGAGVQLLLFH
ITNSQKYKVGITEYLQTWLKKPKTPKGLTFYSPWGSNRYTANTAFIALMA
ASYGLGPEGLYVRWAQKEIDYILTAGGKVNQKSGRPEYSYVIGFGYVLGG
AREGGTEGQRYRSSPRN*
back to top
Synonyms
Publications