NO03G05240, NO03G05240 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G05240 vs. NCBI_GenBank
Match: XP_004958313.1 (uncharacterized protein LOC101766172 [Setaria italica] >KQL26668.1 hypothetical protein SETIT_029768mg [Setaria italica]) HSP 1 Score: 145.2 bits (365), Expect = 4.000e-31 Identity = 88/213 (41.31%), Postives = 126/213 (59.15%), Query Frame = 0 Query: 159 YLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLV-SSQIKQADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQGGADVTDYVVILK-RQAVDSFAGNNQLVLGGDVGATFW-MGRHGTAELHIG-KRTGMALGWAASKGFFAGAAATAGYLCTRGGINKKFYG-REVDPCDLLHGKISKPRAAKPLYEALNDL 367 +LNMP SME EI KA N K K + SS +K A + LT A+AG +T VG+GLVVAR SDGSWSAPSA+ +G G G+Q G ++TD++++L+ R+AV +F+ L LG + A +GR A++ K +G+ ++ SKG F G + + TR N +FYG + D+L G++ +PRAA+PLY AL+DL Sbjct: 244 WLNMPVGVSMEYEIYKATNTMKKYCQVARLNPEKSIPSSILKGAKGLAILTVAKAGAVLTYKVGTGLVVARRSDGSWSAPSAILSVGLGWGVQIGGELTDFIIVLRDRKAVKAFSSRIHLSLGAGLSAAAGPIGRAFEADVRASEKGSGICYSYSCSKGAFVGVSLEGNIVTTRSETNLRFYGDAYLTTTDILFGRVERPRAAQPLYSALDDL 456
BLAST of NO03G05240 vs. NCBI_GenBank
Match: CBN74194.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 144.4 bits (363), Expect = 6.800e-31 Identity = 78/223 (34.98%), Postives = 127/223 (56.95%), Query Frame = 0 Query: 146 EHTVDEGQAILGRYLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLVSSQIKQADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQGGADVTDYVVILKRQ-AVDSFAGNNQLVLGGDVG-ATFWMGRHGTAELHI-GKRTGMALGWAASKGFFAGAAATAGYLCTRGGINKKFYGREVDPCDLLHGKISKPRAAKPLYEALND 366 E+ V+ G + YLN P F++ E+RKA N D + + +A + FLT + G + G VG+GLV+++ +G WSAPSA+ LG G G G ++TD+V++L A+++F+G Q+ +G ++ A +GR G + + + A ++ S+G FAG + G + +R +N+KFYGR+V DLL G ++ P AA+PLYEAL++ Sbjct: 310 ENDVERG--TVASYLNRPIVFTLGAEVRKAAYTIHNFSKEGMIQDQSIPQELLSRAKGLAFLTVIKGGFIVAGRVGTGLVISKTDEGVWSAPSAIATLGMGWGALIGGEITDFVLVLNTDAALEAFSGRGQVSIGAELSVAVGPVGRTGAGNVSVAAEGVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRDLLSGSVAPPPAARPLYEALDN 530
BLAST of NO03G05240 vs. NCBI_GenBank
Match: OQS05939.1 (hypothetical protein THRCLA_01978 [Thraustotheca clavata]) HSP 1 Score: 144.4 bits (363), Expect = 6.800e-31 Identity = 85/213 (39.91%), Postives = 121/213 (56.81%), Query Frame = 0 Query: 158 RYLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLVSSQIKQADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQGGADVTDYVVILK-RQAVDSFAGNNQLVLGGDVG-ATFWMGR--HGTAELHIGKRTG---MALGWAASKGFFAGAAATAGYLCTRGGINKKFYGREVDPCDLLHGKISKPRAAKPLYEAL 364 R+LN P++F++ +EIRKA KN D + + A + FLT +AG +TG VG+GLV+A+ DGSWSAPSA+ G G G Q G VTD+V+IL R AVD+F Q+ +G ++G A +GR G E I R G ++ SKG F G + + R +N++FYG+ V +LL G+ +P AA+PLY+AL Sbjct: 133 RFLNSPYSFTLREEIRKAAYSVKNFMYDGVIKDQSIPLPLVTNAKGIAFLTVLKAGFVVTGRVGTGLVIAKLPDGSWSAPSAIATAGIGWGAQIGGGVTDFVIILNTRSAVDTFCAQGQINMGAELGVAAGPLGRVAAGAMEAGIALRPGGIAPCYSYSHSKGLFIGISIEGSIVVARPDVNREFYGKSVTAAELLSGQERRPVAAQPLYDAL 345
BLAST of NO03G05240 vs. NCBI_GenBank
Match: PAN14825.1 (hypothetical protein PAHAL_B04695 [Panicum hallii] >PAN14826.1 hypothetical protein PAHAL_B04695 [Panicum hallii]) HSP 1 Score: 143.3 bits (360), Expect = 1.500e-30 Identity = 88/213 (41.31%), Postives = 125/213 (58.69%), Query Frame = 0 Query: 159 YLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLV-SSQIKQADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQGGADVTDYVVIL-KRQAVDSFAGNNQLVLGGDVGATFW-MGRHGTAELHIG-KRTGMALGWAASKGFFAGAAATAGYLCTRGGINKKFYG-REVDPCDLLHGKISKPRAAKPLYEALNDL 367 +LNMP SME EI KA N K K + SS +K A + LT A+AG +T VG+GLVVAR SDGSWSAPSA+ +G G G+Q G ++TD++++L R+AV +F+ L LG + A +GR A++ K +G+ ++ SKG F G + + TR N +FYG + D+L G++ +PRAA+PLY AL+DL Sbjct: 244 WLNMPVGVSMEYEIYKATNTMKKYCQVARLNPEKSIPSSILKGAKGLAILTVAKAGAVLTYKVGTGLVVARRSDGSWSAPSAILSVGLGWGVQIGGELTDFIIVLHDRKAVKAFSSRIHLSLGAGLSAAAGPIGRAFEADVRASEKGSGICYTYSCSKGAFVGVSLEGNVVTTRSETNLRFYGDAYLTTTDILFGRVGRPRAAQPLYSALDDL 456
BLAST of NO03G05240 vs. NCBI_GenBank
Match: XP_008621198.1 (hypothetical protein SDRG_16759 [Saprolegnia diclina VS20] >EQC25348.1 hypothetical protein SDRG_16759 [Saprolegnia diclina VS20]) HSP 1 Score: 142.9 bits (359), Expect = 2.000e-30 Identity = 84/210 (40.00%), Postives = 119/210 (56.67%), Query Frame = 0 Query: 158 RYLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLVSSQIKQADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQGGADVTDYVVILK-RQAVDSFAGNNQLVLGGDVG-ATFWMGRHGTAELHIGKRTGMA--LGWAASKGFFAGAAATAGYLCTRGGINKKFYGREVDPCDLLHGKISKPRAAKPLYEAL 364 R+LN P++F++ +EIRKA KN D + + A + FLT + G +TG VG+GLV+A+ DGSWSAPSA+ G G G Q G VTD+V+IL R AVD+F Q+ +G ++G A +GR + G G+A ++ SKG F G + + R +N +FYG+EV DLL G+ P AA+PLY+AL Sbjct: 135 RFLNSPYSFTLREEIRKAAYSVKNFMYDGVIKDQSIPLPLLTNAKGIAFLTVLKVGFVVTGRVGTGLVIAKLPDGSWSAPSAIATAGIGWGAQIGGGVTDFVIILNTRSAVDTFCAQGQVNMGAELGVAAGPLGRVAAGAMEAGP-GGIAPCYSYSHSKGLFIGISVEGSVVLARPDVNLEFYGKEVTAADLLSGREPPPVAAQPLYDAL 343
BLAST of NO03G05240 vs. NCBI_GenBank
Match: XP_008621199.1 (hypothetical protein, variant [Saprolegnia diclina VS20] >EQC25349.1 hypothetical protein, variant [Saprolegnia diclina VS20]) HSP 1 Score: 142.9 bits (359), Expect = 2.000e-30 Identity = 84/210 (40.00%), Postives = 119/210 (56.67%), Query Frame = 0 Query: 158 RYLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLVSSQIKQADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQGGADVTDYVVILK-RQAVDSFAGNNQLVLGGDVG-ATFWMGRHGTAELHIGKRTGMA--LGWAASKGFFAGAAATAGYLCTRGGINKKFYGREVDPCDLLHGKISKPRAAKPLYEAL 364 R+LN P++F++ +EIRKA KN D + + A + FLT + G +TG VG+GLV+A+ DGSWSAPSA+ G G G Q G VTD+V+IL R AVD+F Q+ +G ++G A +GR + G G+A ++ SKG F G + + R +N +FYG+EV DLL G+ P AA+PLY+AL Sbjct: 126 RFLNSPYSFTLREEIRKAAYSVKNFMYDGVIKDQSIPLPLLTNAKGIAFLTVLKVGFVVTGRVGTGLVIAKLPDGSWSAPSAIATAGIGWGAQIGGGVTDFVIILNTRSAVDTFCAQGQVNMGAELGVAAGPLGRVAAGAMEAGP-GGIAPCYSYSHSKGLFIGISVEGSVVLARPDVNLEFYGKEVTAADLLSGREPPPVAAQPLYDAL 334
BLAST of NO03G05240 vs. NCBI_GenBank
Match: XP_012204333.1 (hypothetical protein SPRG_09517 [Saprolegnia parasitica CBS 223.65] >KDO24872.1 hypothetical protein SPRG_09517 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 142.9 bits (359), Expect = 2.000e-30 Identity = 84/210 (40.00%), Postives = 119/210 (56.67%), Query Frame = 0 Query: 158 RYLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLVSSQIKQADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQGGADVTDYVVILK-RQAVDSFAGNNQLVLGGDVG-ATFWMGRHGTAELHIGKRTGMA--LGWAASKGFFAGAAATAGYLCTRGGINKKFYGREVDPCDLLHGKISKPRAAKPLYEAL 364 R+LN P++F++ +EIRKA KN D + + A + FLT + G +TG VG+GLV+A+ DGSWSAPSA+ G G G Q G VTD+V+IL R AVD+F Q+ +G ++G A +GR + G G+A ++ SKG F G + + R +N +FYG+EV DLL G+ P AA+PLY+AL Sbjct: 126 RFLNSPYSFTLREEIRKAAYSVKNFMYDGVIKDQSIPLPLLTNAKGIAFLTVLKVGFVVTGRVGTGLVIAKLPDGSWSAPSAIATAGIGWGAQIGGGVTDFVIILNTRSAVDTFCAQGQVNMGAELGVAAGPLGRVAAGAMEAGP-GGIAPCYSYSHSKGLFIGISVEGSVVLARPDVNLEFYGKEVTAADLLSGRERPPVAAQPLYDAL 334
BLAST of NO03G05240 vs. NCBI_GenBank
Match: XP_002461020.2 (uncharacterized protein LOC8079192 [Sorghum bicolor] >XP_021308252.1 uncharacterized protein LOC8079192 [Sorghum bicolor] >OQU90261.1 hypothetical protein SORBI_3002G375300 [Sorghum bicolor]) HSP 1 Score: 142.5 bits (358), Expect = 2.600e-30 Identity = 88/213 (41.31%), Postives = 125/213 (58.69%), Query Frame = 0 Query: 159 YLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLV-SSQIKQADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQGGADVTDYVVIL-KRQAVDSFAGNNQLVLGGDVGATFW-MGRHGTAELHIG-KRTGMALGWAASKGFFAGAAATAGYLCTRGGINKKFYG-REVDPCDLLHGKISKPRAAKPLYEALNDL 367 +LNMP SME EI KA N K K + SS +K A + LT A+AG +T VG+GLVVAR SDGSWSAPSA+ +G G G+Q G ++TD++++L R+AV +F+ L LG + A +GR A++ K +G+ ++ SKG F G + + TR N +FYG + D+L G++ +PRAA+PLY AL+DL Sbjct: 243 WLNMPVGVSMEYEIYKATNTMKKYCQIARLNPEKSIPSSILKGAKGLAILTVAKAGAVLTYKVGTGLVVARRSDGSWSAPSAILSVGLGWGVQIGGELTDFIIVLHDRKAVKAFSSRIHLSLGAGLSAAAGPIGRAFEADVRASDKGSGICYTYSCSKGAFVGVSLEGNVVTTRMETNLRFYGDAYLTATDILFGRVERPRAAQPLYSALDDL 455
BLAST of NO03G05240 vs. NCBI_GenBank
Match: PUZ72915.1 (hypothetical protein GQ55_2G433800 [Panicum hallii var. hallii]) HSP 1 Score: 142.5 bits (358), Expect = 2.600e-30 Identity = 87/213 (40.85%), Postives = 125/213 (58.69%), Query Frame = 0 Query: 159 YLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLV-SSQIKQADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQGGADVTDYVVIL-KRQAVDSFAGNNQLVLGGDVGATFW-MGRHGTAELHIG-KRTGMALGWAASKGFFAGAAATAGYLCTRGGINKKFYG-REVDPCDLLHGKISKPRAAKPLYEALNDL 367 +LNMP SME EI KA N K K + SS +K A + LT A+AG +T VG+GLVVAR SDGSWSAPSA+ +G G G+Q G ++TD++++L R+AV +F+ + LG + A +GR A++ K +G+ ++ SKG F G + + TR N +FYG + D+L G++ +PRAA+PLY AL+DL Sbjct: 244 WLNMPVGVSMEYEIYKATNTMKKYCQVARLNPEKSIPSSILKGAKGLAILTVAKAGAVLTYKVGTGLVVARRSDGSWSAPSAILSVGLGWGVQIGGELTDFIIVLHDRKAVKAFSSRIHISLGAGLSAAAGPIGRAFEADVRASEKGSGICYTYSCSKGAFVGVSLEGNVVTTRSETNLRFYGDAYLTTTDILFGRVGRPRAAQPLYSALDDL 456
BLAST of NO03G05240 vs. NCBI_GenBank
Match: XP_024580201.1 (hypothetical protein F443_09591 [Plasmopara halstedii] >CEG43832.1 hypothetical protein F443_09591 [Plasmopara halstedii]) HSP 1 Score: 142.1 bits (357), Expect = 3.400e-30 Identity = 90/239 (37.66%), Postives = 131/239 (54.81%), Query Frame = 0 Query: 133 VERGVKQLVPSEMEHTVDEGQAILG---RYLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLVSSQIKQADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQGGADVTDYVVILK-RQAVDSFAGNNQLVLGGDVG-ATFWMGR--HGTAELHIGKRTGMALGWAASKGFFAGAAATAGYLCTRGGINKKFYGREVDPCDLLHGKISKPRAAKPLYEALN 365 +ER ++L+ + M H V E + R +N P++F++++EIRKA KN + + + A + FLT + G TG +G+GLVVAR SDG WSAPSA+ G G G Q G ++TD+V+IL +QAVD+F + Q+ LG ++G A +GR G E ++ S+G FAG + + +R IN+ FYG+ V DLL G PRAA PLYE +N Sbjct: 90 LEREQEELLKT-MSHAVQETEVKESGPHRIINSPYSFTLQEEIRKATYSVKNFTPQGMVKEYSIPLPLLTHAKGIAFLTVIKIGFVFTGRIGTGLVVARLSDGRWSAPSAIGTAGVGWGPQIGGELTDFVIILNTQQAVDAFCASGQVNLGAELGIAAGPVGRVASGALEASASMDVAPCYSYSHSQGLFAGISLEGSVILSRPDINRLFYGKMVTVPDLLGGVEPPPRAAAPLYETIN 327 The following BLAST results are available for this feature:
BLAST of NO03G05240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G05240 ID=NO03G05240|Name=NO03G05240|organism=Nannochloropsis oceanica|type=gene|length=1473bpback to top protein sequence of NO03G05240.1 >NO03G05240.1-protein ID=NO03G05240.1-protein|Name=NO03G05240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=368bpback to top Synonyms
Publications
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