NO03G05240, NO03G05240 (gene) Nannochloropsis oceanica

Overview
NameNO03G05240
Unique NameNO03G05240
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1473
Alignment locationchr3:1495566..1497038 +

Link to JBrowse

Properties
Property NameValue
DescriptionRING/FYVE/PHD-type zinc finger family protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1495566..1497038 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007461Ysc84_actin-binding
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Homology
BLAST of NO03G05240 vs. NCBI_GenBank
Match: XP_004958313.1 (uncharacterized protein LOC101766172 [Setaria italica] >KQL26668.1 hypothetical protein SETIT_029768mg [Setaria italica])

HSP 1 Score: 145.2 bits (365), Expect = 4.000e-31
Identity = 88/213 (41.31%), Postives = 126/213 (59.15%), Query Frame = 0
Query:  159 YLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLV-SSQIKQADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQGGADVTDYVVILK-RQAVDSFAGNNQLVLGGDVGATFW-MGRHGTAELHIG-KRTGMALGWAASKGFFAGAAATAGYLCTRGGINKKFYG-REVDPCDLLHGKISKPRAAKPLYEALNDL 367
            +LNMP   SME EI KA N  K           K + SS +K A  +  LT A+AG  +T  VG+GLVVAR SDGSWSAPSA+  +G G G+Q G ++TD++++L+ R+AV +F+    L LG  + A    +GR   A++    K +G+   ++ SKG F G +     + TR   N +FYG   +   D+L G++ +PRAA+PLY AL+DL
Sbjct:  244 WLNMPVGVSMEYEIYKATNTMKKYCQVARLNPEKSIPSSILKGAKGLAILTVAKAGAVLTYKVGTGLVVARRSDGSWSAPSAILSVGLGWGVQIGGELTDFIIVLRDRKAVKAFSSRIHLSLGAGLSAAAGPIGRAFEADVRASEKGSGICYSYSCSKGAFVGVSLEGNIVTTRSETNLRFYGDAYLTTTDILFGRVERPRAAQPLYSALDDL 456          
BLAST of NO03G05240 vs. NCBI_GenBank
Match: CBN74194.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 144.4 bits (363), Expect = 6.800e-31
Identity = 78/223 (34.98%), Postives = 127/223 (56.95%), Query Frame = 0
Query:  146 EHTVDEGQAILGRYLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLVSSQIKQADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQGGADVTDYVVILKRQ-AVDSFAGNNQLVLGGDVG-ATFWMGRHGTAELHI-GKRTGMALGWAASKGFFAGAAATAGYLCTRGGINKKFYGREVDPCDLLHGKISKPRAAKPLYEALND 366
            E+ V+ G   +  YLN P  F++  E+RKA     N        D  +    + +A  + FLT  + G  + G VG+GLV+++  +G WSAPSA+  LG G G   G ++TD+V++L    A+++F+G  Q+ +G ++  A   +GR G   + +  +    A  ++ S+G FAG +   G + +R  +N+KFYGR+V   DLL G ++ P AA+PLYEAL++
Sbjct:  310 ENDVERG--TVASYLNRPIVFTLGAEVRKAAYTIHNFSKEGMIQDQSIPQELLSRAKGLAFLTVIKGGFIVAGRVGTGLVISKTDEGVWSAPSAIATLGMGWGALIGGEITDFVLVLNTDAALEAFSGRGQVSIGAELSVAVGPVGRTGAGNVSVAAEGVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRDLLSGSVAPPPAARPLYEALDN 530          
BLAST of NO03G05240 vs. NCBI_GenBank
Match: OQS05939.1 (hypothetical protein THRCLA_01978 [Thraustotheca clavata])

HSP 1 Score: 144.4 bits (363), Expect = 6.800e-31
Identity = 85/213 (39.91%), Postives = 121/213 (56.81%), Query Frame = 0
Query:  158 RYLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLVSSQIKQADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQGGADVTDYVVILK-RQAVDSFAGNNQLVLGGDVG-ATFWMGR--HGTAELHIGKRTG---MALGWAASKGFFAGAAATAGYLCTRGGINKKFYGREVDPCDLLHGKISKPRAAKPLYEAL 364
            R+LN P++F++ +EIRKA    KN        D  +    +  A  + FLT  +AG  +TG VG+GLV+A+  DGSWSAPSA+   G G G Q G  VTD+V+IL  R AVD+F    Q+ +G ++G A   +GR   G  E  I  R G       ++ SKG F G +     +  R  +N++FYG+ V   +LL G+  +P AA+PLY+AL
Sbjct:  133 RFLNSPYSFTLREEIRKAAYSVKNFMYDGVIKDQSIPLPLVTNAKGIAFLTVLKAGFVVTGRVGTGLVIAKLPDGSWSAPSAIATAGIGWGAQIGGGVTDFVIILNTRSAVDTFCAQGQINMGAELGVAAGPLGRVAAGAMEAGIALRPGGIAPCYSYSHSKGLFIGISIEGSIVVARPDVNREFYGKSVTAAELLSGQERRPVAAQPLYDAL 345          
BLAST of NO03G05240 vs. NCBI_GenBank
Match: PAN14825.1 (hypothetical protein PAHAL_B04695 [Panicum hallii] >PAN14826.1 hypothetical protein PAHAL_B04695 [Panicum hallii])

HSP 1 Score: 143.3 bits (360), Expect = 1.500e-30
Identity = 88/213 (41.31%), Postives = 125/213 (58.69%), Query Frame = 0
Query:  159 YLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLV-SSQIKQADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQGGADVTDYVVIL-KRQAVDSFAGNNQLVLGGDVGATFW-MGRHGTAELHIG-KRTGMALGWAASKGFFAGAAATAGYLCTRGGINKKFYG-REVDPCDLLHGKISKPRAAKPLYEALNDL 367
            +LNMP   SME EI KA N  K           K + SS +K A  +  LT A+AG  +T  VG+GLVVAR SDGSWSAPSA+  +G G G+Q G ++TD++++L  R+AV +F+    L LG  + A    +GR   A++    K +G+   ++ SKG F G +     + TR   N +FYG   +   D+L G++ +PRAA+PLY AL+DL
Sbjct:  244 WLNMPVGVSMEYEIYKATNTMKKYCQVARLNPEKSIPSSILKGAKGLAILTVAKAGAVLTYKVGTGLVVARRSDGSWSAPSAILSVGLGWGVQIGGELTDFIIVLHDRKAVKAFSSRIHLSLGAGLSAAAGPIGRAFEADVRASEKGSGICYTYSCSKGAFVGVSLEGNVVTTRSETNLRFYGDAYLTTTDILFGRVGRPRAAQPLYSALDDL 456          
BLAST of NO03G05240 vs. NCBI_GenBank
Match: XP_008621198.1 (hypothetical protein SDRG_16759 [Saprolegnia diclina VS20] >EQC25348.1 hypothetical protein SDRG_16759 [Saprolegnia diclina VS20])

HSP 1 Score: 142.9 bits (359), Expect = 2.000e-30
Identity = 84/210 (40.00%), Postives = 119/210 (56.67%), Query Frame = 0
Query:  158 RYLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLVSSQIKQADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQGGADVTDYVVILK-RQAVDSFAGNNQLVLGGDVG-ATFWMGRHGTAELHIGKRTGMA--LGWAASKGFFAGAAATAGYLCTRGGINKKFYGREVDPCDLLHGKISKPRAAKPLYEAL 364
            R+LN P++F++ +EIRKA    KN        D  +    +  A  + FLT  + G  +TG VG+GLV+A+  DGSWSAPSA+   G G G Q G  VTD+V+IL  R AVD+F    Q+ +G ++G A   +GR     +  G   G+A    ++ SKG F G +     +  R  +N +FYG+EV   DLL G+   P AA+PLY+AL
Sbjct:  135 RFLNSPYSFTLREEIRKAAYSVKNFMYDGVIKDQSIPLPLLTNAKGIAFLTVLKVGFVVTGRVGTGLVIAKLPDGSWSAPSAIATAGIGWGAQIGGGVTDFVIILNTRSAVDTFCAQGQVNMGAELGVAAGPLGRVAAGAMEAGP-GGIAPCYSYSHSKGLFIGISVEGSVVLARPDVNLEFYGKEVTAADLLSGREPPPVAAQPLYDAL 343          
BLAST of NO03G05240 vs. NCBI_GenBank
Match: XP_008621199.1 (hypothetical protein, variant [Saprolegnia diclina VS20] >EQC25349.1 hypothetical protein, variant [Saprolegnia diclina VS20])

HSP 1 Score: 142.9 bits (359), Expect = 2.000e-30
Identity = 84/210 (40.00%), Postives = 119/210 (56.67%), Query Frame = 0
Query:  158 RYLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLVSSQIKQADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQGGADVTDYVVILK-RQAVDSFAGNNQLVLGGDVG-ATFWMGRHGTAELHIGKRTGMA--LGWAASKGFFAGAAATAGYLCTRGGINKKFYGREVDPCDLLHGKISKPRAAKPLYEAL 364
            R+LN P++F++ +EIRKA    KN        D  +    +  A  + FLT  + G  +TG VG+GLV+A+  DGSWSAPSA+   G G G Q G  VTD+V+IL  R AVD+F    Q+ +G ++G A   +GR     +  G   G+A    ++ SKG F G +     +  R  +N +FYG+EV   DLL G+   P AA+PLY+AL
Sbjct:  126 RFLNSPYSFTLREEIRKAAYSVKNFMYDGVIKDQSIPLPLLTNAKGIAFLTVLKVGFVVTGRVGTGLVIAKLPDGSWSAPSAIATAGIGWGAQIGGGVTDFVIILNTRSAVDTFCAQGQVNMGAELGVAAGPLGRVAAGAMEAGP-GGIAPCYSYSHSKGLFIGISVEGSVVLARPDVNLEFYGKEVTAADLLSGREPPPVAAQPLYDAL 334          
BLAST of NO03G05240 vs. NCBI_GenBank
Match: XP_012204333.1 (hypothetical protein SPRG_09517 [Saprolegnia parasitica CBS 223.65] >KDO24872.1 hypothetical protein SPRG_09517 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 142.9 bits (359), Expect = 2.000e-30
Identity = 84/210 (40.00%), Postives = 119/210 (56.67%), Query Frame = 0
Query:  158 RYLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLVSSQIKQADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQGGADVTDYVVILK-RQAVDSFAGNNQLVLGGDVG-ATFWMGRHGTAELHIGKRTGMA--LGWAASKGFFAGAAATAGYLCTRGGINKKFYGREVDPCDLLHGKISKPRAAKPLYEAL 364
            R+LN P++F++ +EIRKA    KN        D  +    +  A  + FLT  + G  +TG VG+GLV+A+  DGSWSAPSA+   G G G Q G  VTD+V+IL  R AVD+F    Q+ +G ++G A   +GR     +  G   G+A    ++ SKG F G +     +  R  +N +FYG+EV   DLL G+   P AA+PLY+AL
Sbjct:  126 RFLNSPYSFTLREEIRKAAYSVKNFMYDGVIKDQSIPLPLLTNAKGIAFLTVLKVGFVVTGRVGTGLVIAKLPDGSWSAPSAIATAGIGWGAQIGGGVTDFVIILNTRSAVDTFCAQGQVNMGAELGVAAGPLGRVAAGAMEAGP-GGIAPCYSYSHSKGLFIGISVEGSVVLARPDVNLEFYGKEVTAADLLSGRERPPVAAQPLYDAL 334          
BLAST of NO03G05240 vs. NCBI_GenBank
Match: XP_002461020.2 (uncharacterized protein LOC8079192 [Sorghum bicolor] >XP_021308252.1 uncharacterized protein LOC8079192 [Sorghum bicolor] >OQU90261.1 hypothetical protein SORBI_3002G375300 [Sorghum bicolor])

HSP 1 Score: 142.5 bits (358), Expect = 2.600e-30
Identity = 88/213 (41.31%), Postives = 125/213 (58.69%), Query Frame = 0
Query:  159 YLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLV-SSQIKQADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQGGADVTDYVVIL-KRQAVDSFAGNNQLVLGGDVGATFW-MGRHGTAELHIG-KRTGMALGWAASKGFFAGAAATAGYLCTRGGINKKFYG-REVDPCDLLHGKISKPRAAKPLYEALNDL 367
            +LNMP   SME EI KA N  K           K + SS +K A  +  LT A+AG  +T  VG+GLVVAR SDGSWSAPSA+  +G G G+Q G ++TD++++L  R+AV +F+    L LG  + A    +GR   A++    K +G+   ++ SKG F G +     + TR   N +FYG   +   D+L G++ +PRAA+PLY AL+DL
Sbjct:  243 WLNMPVGVSMEYEIYKATNTMKKYCQIARLNPEKSIPSSILKGAKGLAILTVAKAGAVLTYKVGTGLVVARRSDGSWSAPSAILSVGLGWGVQIGGELTDFIIVLHDRKAVKAFSSRIHLSLGAGLSAAAGPIGRAFEADVRASDKGSGICYTYSCSKGAFVGVSLEGNVVTTRMETNLRFYGDAYLTATDILFGRVERPRAAQPLYSALDDL 455          
BLAST of NO03G05240 vs. NCBI_GenBank
Match: PUZ72915.1 (hypothetical protein GQ55_2G433800 [Panicum hallii var. hallii])

HSP 1 Score: 142.5 bits (358), Expect = 2.600e-30
Identity = 87/213 (40.85%), Postives = 125/213 (58.69%), Query Frame = 0
Query:  159 YLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLV-SSQIKQADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQGGADVTDYVVIL-KRQAVDSFAGNNQLVLGGDVGATFW-MGRHGTAELHIG-KRTGMALGWAASKGFFAGAAATAGYLCTRGGINKKFYG-REVDPCDLLHGKISKPRAAKPLYEALNDL 367
            +LNMP   SME EI KA N  K           K + SS +K A  +  LT A+AG  +T  VG+GLVVAR SDGSWSAPSA+  +G G G+Q G ++TD++++L  R+AV +F+    + LG  + A    +GR   A++    K +G+   ++ SKG F G +     + TR   N +FYG   +   D+L G++ +PRAA+PLY AL+DL
Sbjct:  244 WLNMPVGVSMEYEIYKATNTMKKYCQVARLNPEKSIPSSILKGAKGLAILTVAKAGAVLTYKVGTGLVVARRSDGSWSAPSAILSVGLGWGVQIGGELTDFIIVLHDRKAVKAFSSRIHISLGAGLSAAAGPIGRAFEADVRASEKGSGICYTYSCSKGAFVGVSLEGNVVTTRSETNLRFYGDAYLTTTDILFGRVGRPRAAQPLYSALDDL 456          
BLAST of NO03G05240 vs. NCBI_GenBank
Match: XP_024580201.1 (hypothetical protein F443_09591 [Plasmopara halstedii] >CEG43832.1 hypothetical protein F443_09591 [Plasmopara halstedii])

HSP 1 Score: 142.1 bits (357), Expect = 3.400e-30
Identity = 90/239 (37.66%), Postives = 131/239 (54.81%), Query Frame = 0
Query:  133 VERGVKQLVPSEMEHTVDEGQAILG---RYLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLVSSQIKQADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQGGADVTDYVVILK-RQAVDSFAGNNQLVLGGDVG-ATFWMGR--HGTAELHIGKRTGMALGWAASKGFFAGAAATAGYLCTRGGINKKFYGREVDPCDLLHGKISKPRAAKPLYEALN 365
            +ER  ++L+ + M H V E +       R +N P++F++++EIRKA    KN        +  +    +  A  + FLT  + G   TG +G+GLVVAR SDG WSAPSA+   G G G Q G ++TD+V+IL  +QAVD+F  + Q+ LG ++G A   +GR   G  E            ++ S+G FAG +     + +R  IN+ FYG+ V   DLL G    PRAA PLYE +N
Sbjct:   90 LEREQEELLKT-MSHAVQETEVKESGPHRIINSPYSFTLQEEIRKATYSVKNFTPQGMVKEYSIPLPLLTHAKGIAFLTVIKIGFVFTGRIGTGLVVARLSDGRWSAPSAIGTAGVGWGPQIGGELTDFVIILNTQQAVDAFCASGQVNLGAELGIAAGPVGRVASGALEASASMDVAPCYSYSHSQGLFAGISLEGSVILSRPDINRLFYGKMVTVPDLLGGVEPPPRAAAPLYETIN 327          
The following BLAST results are available for this feature:
BLAST of NO03G05240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_004958313.14.000e-3141.31uncharacterized protein LOC101766172 [Setaria ital... [more]
CBN74194.16.800e-3134.98conserved unknown protein [Ectocarpus siliculosus][more]
OQS05939.16.800e-3139.91hypothetical protein THRCLA_01978 [Thraustotheca c... [more]
PAN14825.11.500e-3041.31hypothetical protein PAHAL_B04695 [Panicum hallii]... [more]
XP_008621198.12.000e-3040.00hypothetical protein SDRG_16759 [Saprolegnia dicli... [more]
XP_008621199.12.000e-3040.00hypothetical protein, variant [Saprolegnia diclina... [more]
XP_012204333.12.000e-3040.00hypothetical protein SPRG_09517 [Saprolegnia paras... [more]
XP_002461020.22.600e-3041.31uncharacterized protein LOC8079192 [Sorghum bicolo... [more]
PUZ72915.12.600e-3040.85hypothetical protein GQ55_2G433800 [Panicum hallii... [more]
XP_024580201.13.400e-3037.66hypothetical protein F443_09591 [Plasmopara halste... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005348NSK005348Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05240.1NO03G05240.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573276gene_1738Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05240.1NO03G05240.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05240 ID=NO03G05240|Name=NO03G05240|organism=Nannochloropsis oceanica|type=gene|length=1473bp
GGGATATGCGCGACAAGAAGATTCCAGAAGAAAAAGTGTGTTCCAAAGTA
TATGAAGATGTTCTTTTTAAGAGGATCAAGTCAATTAAGTCGTATGCTTT
TTTTTGTATATCTTTATACTTGGGTATGCGGCAACTGTGGGGAAGCTACG
TGCAGGCACCTTTGGCCGGAACTCCTTGTTCGCTTGCATGTATGTCTCGG
GCTTCCCTCTACGCGCTGGTGCTCCCTCACTGTTTTTCCCCTTGCTCTAC
GTTTACATTTTTCAATTACAGCAATATTCAGCTTTCTTCCGACTATCGAC
GCCACCGCCCTCACCGTATCAACACTGGCAGTAACGACGAAACAACAGCC
AGCGAAATGACCACCAACATTCAGCAGACAATGGGGCAGATGGGGCAGTT
CGTGGAACGTGGTGTGAAGCAACTGGTACCCTCAGAAATGGAGCACACAG
TGGACGAGGGCCAGGCCATTTTGGGGCGCTACCTGAACATGCCCTTCGCA
TTTAGCATGGAACAAGAGATCCGTAAGGCTCGCAACATTTGCAAGAACCT
CAAGGACTTCCCTGCCTACCTCGACGGCAAGCTGGTATCCTCTCAAATCA
AGCAGGCCGACGCGGTGGTATTCTTAACGAATGCCCGTGCGGGCATCTTT
ATGACGGGCCACGTCGGGTCTGGCTTGGTAGTGGCACGCAACTCGGACGG
GTCCTGGTCGGCGCCCTCAGCCGTCTTCTACCTTGGCTCGGGTATGGGCC
TGCAAGGCGGCGCAGATGTGACGGACTACGTGGTCATTCTGAAGCGCCAA
GCTGTGGACTCCTTCGCGGGTAACAACCAGCTGGTCTTGGGCGGCGACGT
CGGCGCGACATTTTGGATGGGGCGTCACGGCACGGCTGAGCTCCATATTG
GAAAGCGGACCGGTATGGCATTGGGCTGGGCGGCGAGCAAAGGGTTTTTT
GCAGGCGCAGCGGCCACAGCTGGCTATCTTTGCACTCGTGGTGGCATCAA
CAAGAAATTTTACGGCCGTGAAGTGGACCCCTGTGACCTGCTCCACGGGA
AGATCAGCAAGCCTCGAGCCGCCAAGCCCCTGTACGAGGCCCTCAACGAC
TTGCCGTAATGTGCTGGGCAGGAGAAGGAAGAAGGTAGAACAATTTTGGT
GTTTGAGAAAGAAGGGCAGTGGTCCTTAAACAGAAAGGAATGGAAGGTAA
GGTTAGTGCGGTGCTTGACTTGTGTGGTACATGAAAGACGATATTGGCAG
AAGCAGCAGTGGTCATTTTAATAAGAACAACAACAATTCCAGCAACACGT
ATGAAGAAAGCCACGAAGAGAGACAAGCAAGTGTCTGCATTGTTCATTAT
GTGTGTGTGCATGCGAGGGTTCCGTATGTCCCGTCTGCGGAAGAGCGGCT
GCTTGTCTAACCATGCTTGGGGGTGTAGTTAAGTGGGAGGTAAGAGAAAG
CATGACTCGAGAGAAAAATGGGG
back to top

protein sequence of NO03G05240.1

>NO03G05240.1-protein ID=NO03G05240.1-protein|Name=NO03G05240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=368bp
MRDKKIPEEKVCSKVYEDVLFKRIKSIKSYAFFCISLYLGMRQLWGSYVQ
APLAGTPCSLACMSRASLYALVLPHCFSPCSTFTFFNYSNIQLSSDYRRH
RPHRINTGSNDETTASEMTTNIQQTMGQMGQFVERGVKQLVPSEMEHTVD
EGQAILGRYLNMPFAFSMEQEIRKARNICKNLKDFPAYLDGKLVSSQIKQ
ADAVVFLTNARAGIFMTGHVGSGLVVARNSDGSWSAPSAVFYLGSGMGLQ
GGADVTDYVVILKRQAVDSFAGNNQLVLGGDVGATFWMGRHGTAELHIGK
RTGMALGWAASKGFFAGAAATAGYLCTRGGINKKFYGREVDPCDLLHGKI
SKPRAAKPLYEALNDLP*
back to top
Synonyms
Publications