NO03G05160, NO03G05160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G05160 vs. NCBI_GenBank
Match: EWM29956.1 (smr domain-containing [Nannochloropsis gaditana]) HSP 1 Score: 193.7 bits (491), Expect = 2.200e-45 Identity = 97/140 (69.29%), Postives = 117/140 (83.57%), Query Frame = 0 Query: 683 MKARHRAAALAIFASRNPSEKKIYEEGVLDLHGLHVAEATEAVEELLPDIYACGKAGEATLITGTGKHSGGVSHYQARLFPALEAYLRELEEEVKGGGKGRKGERESERGLFERVVDPQGYEGGFRVRLSRELMEYWGVG 823 MK RHRAA +AIFA+RNPSE++IY+EG+LDLHGLHVAEATEAVEELLP I+A GK E TLITGTGKHSGGVS +QARLFPA+EAYL++LE V G G+GR+G E R L++ + DPQGY+ G +V LSR LME+WG+G Sbjct: 1 MKERHRAAGMAIFAARNPSERRIYQEGILDLHGLHVAEATEAVEELLPGIFAGGKVTEVTLITGTGKHSGGVSQHQARLFPAMEAYLQDLEAMV-GEGRGRRGGSEGGR-LYKCITDPQGYQAGLKVCLSRPLMEHWGLG 138
BLAST of NO03G05160 vs. NCBI_GenBank
Match: EWM29960.1 (ccch zinc finger and smr domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 185.3 bits (469), Expect = 7.800e-43 Identity = 168/486 (34.57%), Postives = 199/486 (40.95%), Query Frame = 0 Query: 5 PLQRWLARSLRSMGLDDAVFAPYIYALLNEAAEGEGGQDGNVEATLASLCPPQLDQQWNIFCQDLILYNAHPHLLPVSVAPSPSSSASSPIFNALSPAPPCLLRASSSISATSIGAVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASDTGSLHSSPSLLPDYHSHIQPYVPQANYYQQHLRHQQLLQQQHGGFPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYVRDAALGVLMGTFPHASPDALLVALLRCDVDLEEAVRRVDAALKPRVPACRYFVSGFCARADCAFSHALDTMTCIHWLLGSCRDGMMDEESKTLHRCPFWHDI 491 P Q WL SLR+MGLDD FAPYI ALL EA+EG ++G VE TLASLCPP+ + QW FCQDL+LY+A PHLL S SP S ASSP N LSP+P XXXXXXXXXX G GSL +SPS P Y PY+ XXXXXXXXXXXXXXXXXX +Y+ + + L+G+FPH +P+ALL ALLRCD+DLEEAV RV+ ALKP V CRY+++GFCAR+DCAFSHA+ T TC+HWLLGSCRDGM+DEE++ H CPF HD+ Sbjct: 72 PFQLWLHDSLRTMGLDDGTFAPYIQALLMEASEGGVYENGGVEMTLASLCPPEQEPQWKSFCQDLLLYSAQPHLLSASAGHSPPSVASSPA-NTLSPSPE---SXXXXXXXXXXXXXXXXXXXXXXXXXPSLLSSSSRPFLPKRQQSQEHGQQPSSLVGSVTHDHAPGREEDDPFSLDTLSARVASSCLGEDEEEQEAVGPPTQFPDARLGPPDPLYPQPAEASRHMHVAPMGEHGRGHLGSLQASPSFHPYYSPMATPYL------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPEPHRQGSYPHHLHRHGSSEPAGGGGSARGVDDAYGLPDFGFLDEVDEGGAEEEGGREDLWEAQALEMAAVEEDESYIWEMGVNTLLGSFPHCAPEALLTALLRCDLDLEEAVARVEEALKPGVAPCRYYLAGFCARSDCAFSHAIATTTCVHWLLGSCRDGMLDEETQRPHTCPFRHDL 541
BLAST of NO03G05160 vs. NCBI_GenBank
Match: XP_008607766.1 (hypothetical protein SDRG_03897 [Saprolegnia diclina VS20] >EQC38942.1 hypothetical protein SDRG_03897 [Saprolegnia diclina VS20]) HSP 1 Score: 123.2 bits (308), Expect = 3.600e-24 Identity = 117/422 (27.73%), Postives = 161/422 (38.15%), Query Frame = 0 Query: 396 LMGTFPHASPDALLVALLRCDVDLEEAVRRVDA-----ALKPRVPACRYFVSGFCARADCAFSHALDTMTCIHWLLGSCRDGMMDEESKTLHRCPFWHDIRAVDREDGNPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGKSFLQVALASKRTSIPGRNPFPXXXXXXXXXXXXXXXXXXXXXXXXRLESLWVMGGEEVRKTYQQARAEATHAAKARNQYFMRATEAFQRGDKAAAKSLGLEGRHWNAIMKARHRAAALAIFASRNPSEKKIYEEGVLDLHGLHVAEATEAVEELLPDIYACGKAGEATLITGTGKHSGGVSHYQARLFPALEAYLRELEEEVKGGGKGRKGERESERGLFERVVDPQGYEGGFRVRLS 813 L+ FP P+ LL L ++D+ A + A A K CR+++ G C RADC F H +TC +W+ G C G DE C F H E G P +F AS TS P + + WV G +V Y+QAR A A ARNQ FM AT A+++G+K+ AK L +G+ +NA MK H AA IF +RNPS ++ +G+LDLHGLHVAEA E + +LLP + A ++TG+G HS + RL PA+E +L +E F +V D +GY G +V L+ Sbjct: 148 LLSVFPAMDPERLLDLLKEVELDVHRAQGVMQAIVDSEAQKQNAQVCRHYLQGECRRADCWFLHDTHLITCRYWIRGGCLQG--DE-------CAFAHSFEMAIVEYG-------------------ARQEQPQESDEEDDWIDMRDNLEPTNFPSLTSAKAPLASTDGLSLDFARALSMKPDAAF---PSASSSTSSSRHTPL------------------FTRSLSQPVATRWVDTGYQVSAQYKQARERARDLALARNQCFMNATHAYRQGNKSLAKDLSRQGQTYNAQMKDAHYEAASLIFEARNPSYER---DGLLDLHGLHVAEALELLSQLLPTV----TAETICIVTGSGHHS-----HHVRLKPAVERFL------------------AAEGYNFAQVPDRKGYVGMLQVSLA 490
BLAST of NO03G05160 vs. NCBI_GenBank
Match: XP_012203526.1 (hypothetical protein SPRG_09015 [Saprolegnia parasitica CBS 223.65] >KDO25716.1 hypothetical protein SPRG_09015 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 122.5 bits (306), Expect = 6.200e-24 Identity = 117/422 (27.73%), Postives = 161/422 (38.15%), Query Frame = 0 Query: 396 LMGTFPHASPDALLVALLRCDVDLEEAVRRVDA-----ALKPRVPACRYFVSGFCARADCAFSHALDTMTCIHWLLGSCRDGMMDEESKTLHRCPFWHDIRAVDREDGNPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGKSFLQVALASKRTSIPGRNPFPXXXXXXXXXXXXXXXXXXXXXXXXRLESLWVMGGEEVRKTYQQARAEATHAAKARNQYFMRATEAFQRGDKAAAKSLGLEGRHWNAIMKARHRAAALAIFASRNPSEKKIYEEGVLDLHGLHVAEATEAVEELLPDIYACGKAGEATLITGTGKHSGGVSHYQARLFPALEAYLRELEEEVKGGGKGRKGERESERGLFERVVDPQGYEGGFRVRLS 813 L+ FP P+ LL L ++D+ A + A A K CR+++ G C RADC F H +TC +W+ G C G DE C F H E G P +F AS TS P + + WV G +V Y+QAR A A ARNQ FM AT A+++G+K+ AK L +G+ +NA MK H AA IF +RNPS ++ +G+LDLHGLHVAEA E + +LLP + A ++TG+G HS + RL PA+E +L +E F +V D +GY G +V L+ Sbjct: 148 LLSVFPAMDPERLLDLLKEVELDVHRAQGVMQAIVDSEAQKQNAQVCRHYLQGECRRADCWFLHDTHLITCRYWIRGGCLQG--DE-------CAFAHSFEMAIVEYG-------------------ARQEQPQESDEEDDWIDTRDNLEPTNFPSLTSTKTPSASADGLSLDFARALSMKPDAAF---PSASSSTSSSRHTPL------------------FTRSLSQPVAARWVDTGYQVSAQYKQARERARDLALARNQCFMNATHAYRQGNKSLAKDLSRQGQMYNAQMKDAHYEAASLIFEARNPSYER---DGLLDLHGLHVAEALELLAQLLPAV----TAETICIVTGSGHHS-----HHVRLKPAVERFL------------------AAEGYNFAQVPDRKGYVGMLQVSLA 490
BLAST of NO03G05160 vs. NCBI_GenBank
Match: OQS00801.1 (hypothetical protein ACHHYP_02591 [Achlya hypogyna]) HSP 1 Score: 122.1 bits (305), Expect = 8.100e-24 Identity = 104/379 (27.44%), Postives = 144/379 (37.99%), Query Frame = 0 Query: 396 LMGTFPHASPDALLVALLRCDVDLEEAVRRVDA-----ALKPRVPACRYFVSGFCARADCAFSHALDTMTCIHWLLGSCRDGMMDEESKTLHRCPFWHDIRAVDREDGNPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGKSFLQVALASKRTSIPGRNPFPXXXXXXXXXXXXXXXXXXXXXXXXRLESLWVMGGEEVRKTYQQARAEATHAAKARNQYFMRATEAFQRGDKAAAKSLGLEGRHWNAIMKARHRAAALAIFASRNPSEKKIYEEGVLDLHGLHVAEATEAVEELLPDIYACGKAGEATLITGTGKHSGGVSHYQARLFPALEAYL 770 L+ +P P+ LL L ++D+ A + A A K CR+++ G C RADC F H +TC +W+ G C G C F H E G P SF AS + P + + WV G EV Y+Q+R +A H A ARNQ FM AT A+++G+K+ AK L +G+ +NA MK H AAA IF +RNP+ ++ +G LDLHGLHVAEA E + +LLP ++TG+G HS + RL PA+E +L Sbjct: 155 LLSIYPAMDPERLLDLLKAVELDVHRARVVMQAIVESEAQKQNAQVCRHYLQGECRRADCWFLHDTHLITCRYWIRGGCLQG---------EECAFAHSFDVAIAEHG----------------ACQEQPEESDDDDDWVGDQLEATNFPSLTKTPVAPTSDAALSLDFARALSMKPDAVFPAASFTSGRSASHTPAYSRSLSAP-------------------------VTARWVDTGYEVSSQYKQSREQARHLALARNQCFMNATHAYRQGNKSLAKELSRQGQQYNAQMKDAHYAAASVIFEARNPNWQR---DGFLDLHGLHVAEALELLAQLLP----TATTDTVCVVTGSGHHS-----HHVRLKPAVERFL 471
BLAST of NO03G05160 vs. NCBI_GenBank
Match: CCA26658.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 120.6 bits (301), Expect = 2.400e-23 Identity = 118/432 (27.31%), Postives = 166/432 (38.43%), Query Frame = 0 Query: 400 FPHASPDAL--LVALLRCDVDLEEAVRRVDAALKPRVPA--CRYFVSGFCARADCAFSHALDTMTCIHWLLGSC---RDGMMDEESKTLHRCPFWHDI-RAVDREDGNPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGKSFLQVALASKRTSIPGR------------NPFPXXXXXXXXXXXXXXXXXXXXXXXXRLESLWVMGGEEVRKTYQQARAEATHAAKARNQYFMRATEAFQRGDKAAAKSLGLEGRHWNAIMKARHRAAALAIFASRNPSEKKIYEEGVLDLHGLHVAEATEAVEELLPDIYACGKAGEATLITGTGKHSGGVSHYQARLFPALEAYLRELEEEVKGGGKGRKGERESERGLFERVVDPQGYEGGFRVRL 812 FP + + + L+ L+ ++D AV + + A CR+++ G C R+DC F H+ + +TC WL G C +D + + LHR D R + ED PG+S L + +K+T R P P +++ WV G+ V Y Q R EA A ARN+ FMRATEA++ G+K A S+ EGR N MK H AA IF SRNP E ++Y + ++DLHGLHV EA E + LP + G ++TGTG HS G + ARL PA+E +LR +E E V D +GY G +V L Sbjct: 184 FPEVNANRMSELLRLVGMNMDRAHAVLKSTFTKEAEGSAQVCRHYLQGRCHRSDCMFLHSTNDVTCRFWLRGLCLQDKDCVFAHDFVELHRLELHRDTHRDYESEDEETE----------------------------------------------------QNELELSKDAFPSLGSIPPGESNLPIRQQNKQTLDYARAVSLYPYQFVHSQPRPGTMTFTSSSAGTRPIRTLKPVRMNKVK--WVTTGKSVTSQYHQVREEAYQLACARNKCFMRATEAYRSGNKVIATSMSREGRLHNEKMKKLHLMAAEVIFKSRNPQE-QVYRDRLMDLHGLHVVEAVEFLRSWLPQLAEDG-LDTVRIVTGTGHHSRGPQN-TARLLPAVEHFLR------------------TEGYESESVADRKGYVGMLQVNL 540
BLAST of NO03G05160 vs. NCBI_GenBank
Match: XP_005853353.1 (hypothetical protein NGA_0684800 [Nannochloropsis gaditana CCMP526] >EKU23006.1 hypothetical protein NGA_0684800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 118.6 bits (296), Expect = 9.000e-23 Identity = 61/99 (61.62%), Postives = 70/99 (70.71%), Query Frame = 0 Query: 5 PLQRWLARSLRSMGLDDAVFAPYIYALLNEAAEGEGGQDGNVEATLASLCPPQLDQQWNIFCQDLILYNAHPHLLPVSVAPSPSSSASSPIFNALSPAP 104 P Q WL SLR+MGLDD FAPYI ALL EA+EG ++G VE TLASLCPP+ + QW FCQ L+LY+A PHLL S SP S ASSP N LSP+P Sbjct: 8 PFQLWLHDSLRTMGLDDGTFAPYIQALLMEASEGGVYENGGVEMTLASLCPPEQEPQWKSFCQGLLLYSAQPHLLSASAGHSPPSVASSPA-NTLSPSP 105
BLAST of NO03G05160 vs. NCBI_GenBank
Match: XP_009834465.1 (hypothetical protein H257_09801 [Aphanomyces astaci] >ETV76340.1 hypothetical protein H257_09801 [Aphanomyces astaci]) HSP 1 Score: 117.5 bits (293), Expect = 2.000e-22 Identity = 114/382 (29.84%), Postives = 153/382 (40.05%), Query Frame = 0 Query: 396 LMGTFPHASPDALLVALLRCDVDLEEAVRR----VDAALKP--RVPACRYFVSGFCARADCAFSHALDTMTCIHWLLGSCRDGMMDEESKTLHRCPFWHDIRAVDREDGNPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGKSFLQVALASKRTSIPGRNPFPXXXXXXXXXXXXXXXXXXXXXXXXRLESLWVMGGEEVRKTYQQARAEATHAAKARNQYFMRATEAFQRGDKAAAKSLGLEGRHWNAIMKARHRAAALAIFASRNPSEKKIYE-EGVLDLHGLHVAEATEAVEELLPDIYACGKAGEA-TLITGTGKHSGGVSHYQARLFPALEAYL 770 L+ FP P+ LL L D+++ A VD+ L CR+++ G C RADC F H + C +W+ G C G DE C F H AV + S G + K++S+PG++ + WV G++V YQ+ARA A A ARNQ FM AT AF+ +KAAAKSL +G+ +NA MK H AA IF +RNP YE +G++DLHGLHV EA E + LLP I K EA ++TG+G H SH+Q RL PA+E +L Sbjct: 161 LLLVFPVMDPERLLDLLKEVDLNVHRAQATMQGIVDSELSKGNNAQVCRHYLQGDCRRADCWFLHDTHLIPCRYWIRGGCLQG--DE-------CAFAHSF-AVAVSQYSSSVVADTDEHDDEEPLEWNFPALGGLTTTVSDDGLSLNFKRAVAMAPTSSSSYGGSNSWF-------------GSATSANLTHKKQSSVPGKSTMSI--------------------------TQWVETGDQVAVQYQRARATARDLALARNQCFMNATRAFRANNKAAAKSLSRQGQQFNAEMKQAHFEAATIIFNARNPQ----YEVDGIVDLHGLHVVEAVELLAWLLPSI----KTREAICVVTGSGHH----SHHQ-RLRPAVERFL 480
BLAST of NO03G05160 vs. NCBI_GenBank
Match: XP_009526064.1 (hypothetical protein PHYSODRAFT_314545 [Phytophthora sojae] >EGZ17006.1 hypothetical protein PHYSODRAFT_314545 [Phytophthora sojae]) HSP 1 Score: 117.1 bits (292), Expect = 2.600e-22 Identity = 107/387 (27.65%), Postives = 143/387 (36.95%), Query Frame = 0 Query: 400 FPHASPDAL--LVALLRCDVDLEEAVRRVDAALKPRVP--ACRYFVSGFCARADCAFSHALDTMTCIHWLLGSCRDGMMDEESKTLHRCPFWHDI-------------RAVDREDGNPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGKSFLQVALASKRTSIPGRNPFPXXXXXXXXXXXXXXXXXXXXXXXXRLESLWVMGGEEVRKTYQQARAEATHAAKARNQYFMRATEAFQRGDKAAAKSLGLEGRHWNAIMKARHRAAALAIFASRNPSEKKIYEEGVLDLHGLHVAEATEAVEELLPDIYACGKAGEATLITGTGKHSGGVSHYQARLFPALEAYL 770 FP P L L+ L+ DVD AV + + P CR+++ G C RADC F H D +TC WL G+C C F HD R D ED PG + + S R P P + + WV G+ V Y + R +A A ARN+ FM AT+A++ G+KA AK L +G +N MK H AA IF SRNP ++Y + ++DLHGLHVAEA E + ++LP + A L+TG+G HS G ARL PA+E +L Sbjct: 211 FPDIDPSRLCDLLRLVGLDVDKAHAVLKATIERESIGPGQVCRHYLQGECRRADCMFLHDTDKITCRFWLRGTCLQA---------EHCVFAHDFCEYYSMDDNALGQRDYDSEDEMEQNGAPLDIQAEDMFPSLQSATSGATAPASPPLPQGSDGPSLAAATTTYPSTEDAVANLTMNFARAVALQPTPGATTRPLGNGSYGLDSTRRMPPPAPVHRPLYHKAGSSEG---------IGTKWVSTGQSVATQYLELREQAYEMACARNKCFMGATQAYRNGNKALAKGLSKQGHEYNVKMKNFHFLAASEIFESRNP-PNQLYMDRMMDLHGLHVAEAVEFLTQMLPKL-ADESVDSIYLVTGSGHHSKGPDG-NARLLPAVERFL 576
BLAST of NO03G05160 vs. NCBI_GenBank
Match: XP_024575763.1 (hypothetical protein F443_09528 [Plasmopara halstedii] >CEG39394.1 hypothetical protein F443_09528 [Plasmopara halstedii]) HSP 1 Score: 115.9 bits (289), Expect = 5.800e-22 Identity = 106/376 (28.19%), Postives = 146/376 (38.83%), Query Frame = 0 Query: 400 FPHASPDAL--LVALLRCDVDLEEAVRRVDAALKPRVP--ACRYFVSGFCARADCAFSHALDTMTCIHWLLGSCRDGMMDEESKTLHRCPFWHDIRAVDREDGNPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGKSFLQ-VALASKRTSIPGR-NPFPXXXXXXXXXXXXXXXXXXXXXXXXRLESLWVMGGEEVRKTYQQARAEATHAAKARNQYFMRATEAFQRGDKAAAKSLGLEGRHWNAIMKARHRAAALAIFASRNPSEKKIYEEGVLDLHGLHVAEATEAVEELLPDIYACGKAGEATLITGTGKHSGGVSHYQARLFPALEAYL 770 FP P+ L L+ L+ DVD AV + + P CR+++ G C RADC F H D +TC WL G+C C F HD DG+ +F + VAL T GR + + + WV GE V Y + R +A A ARN+ FM AT+A++ G+KA AK L +G +N MK H AA IF SRNP ++Y + ++DLHGLHVAE E + ++LP + G L+TG+G HS G S+ ARL PA++ +L Sbjct: 177 FPDIDPNRLCDLLRLVGLDVDKAHAVMKATIERESIGPGQVCRHYLQGECRRADCMFLHDTDKITCRFWLRGTCLQA---------EHCVFAHDFCEYYSMDGDALGQRDYDSEDEMDQNSELLDIQAEEMFPALQSVTSATSTSVPLLRQGNDCLSLTKTNSYPSTENVVANLT---MNFARAVALQPAPTKFSGRLHDGGSDMQSSRRVPQSPPIYRSLYHKAGKNDVKWVTTGESVSSQYLELREQAHEMACARNKCFMGATQAYRNGNKALAKDLSRQGHEYNVKMKNFHFLAASEIFESRNP-PNQLYMDRMMDLHGLHVAETVELLTQMLPKLADEG-VDSIHLVTGSGHHSKG-SNGNARLLPAVKQFL 537 The following BLAST results are available for this feature:
BLAST of NO03G05160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G05160 ID=NO03G05160|Name=NO03G05160|organism=Nannochloropsis oceanica|type=gene|length=2993bpback to top protein sequence of NO03G05160.1 >NO03G05160.1-protein ID=NO03G05160.1-protein|Name=NO03G05160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=824bpback to top Synonyms
Publications
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