NO03G05140, NO03G05140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G05140 vs. NCBI_GenBank
Match: EWM29953.1 (rieske (2fe-2s) domain protein [Nannochloropsis gaditana]) HSP 1 Score: 183.3 bits (464), Expect = 6.400e-43 Identity = 100/165 (60.61%), Postives = 114/165 (69.09%), Query Frame = 0 Query: 16 MQFVRTIAALLLAASVSQAFL---VPTPTSGRALTSRSATVVVGPATDIPRGERKIVDTDAGAVIVANVEGSFYAVLAKCPHLGLPMKTGNIAVEGGEPTITCKFHNSKFELATGKCTAWSESVFGIKGTEGIAGFVGGFGGAKDSPATVFPVLTSEEGLVSIEV 178 M T+ A++ A ++S+AFL P R L S +ATV VG T++P GERK+VDT+AGAVIV NV GS YAVLAKCPHLGLPMKTG IA+EGGEPTITCKFHNSKF L GKC AWSESVFGIK SPATVFP SEEG+VSIE+ Sbjct: 1 MHLASTLLAIIAALTLSEAFLGLKSPGHLPFRRLPSLAATVPVGSVTELPPGERKVVDTEAGAVIVTNVGGSLYAVLAKCPHLGLPMKTGVIAIEGGEPTITCKFHNSKFALTDGKCKAWSESVFGIKXXXXXXXXXXXXXXXXXSPATVFPTSMSEEGIVSIEM 165
BLAST of NO03G05140 vs. NCBI_GenBank
Match: CAH25375.1 (putative ferredoxin component, partial [Guillardia theta]) HSP 1 Score: 131.7 bits (330), Expect = 2.200e-27 Identity = 67/128 (52.34%), Postives = 82/128 (64.06%), Query Frame = 0 Query: 49 RSATVVVGPATDIPRGERKIVDTDAGAVIVANVEGSFYAVLAKCPHLGLPMKTGNIAVEGGEPTITCKFHNSKFELATGKCTAWSESVFGIKGTEGIAGFVGGFGGAKDSPATVFPVLTSEEGLVSIE 177 R A VG +IP GERKI V+V N +G+ YA+ KCPHLGLPMKTG I+ +G P I CKFH SKF+L GKC WS V GI GT+ + GF+G GGAK+SPATVF V EG + ++ Sbjct: 31 RMAGEKVGNVNEIPPGERKITKVGDQDVMVVNHKGTVYALSPKCPHLGLPMKTGEISDDG--PCIKCKFHGSKFKLDDGKCVEWSTGVLGIPGTQALGGFIGNVGGAKNSPATVFAVEVDAEGGIIVD 156
BLAST of NO03G05140 vs. NCBI_GenBank
Match: XP_005833850.1 (hypothetical protein GUITHDRAFT_86526 [Guillardia theta CCMP2712] >EKX46870.1 hypothetical protein GUITHDRAFT_86526 [Guillardia theta CCMP2712]) HSP 1 Score: 131.7 bits (330), Expect = 2.200e-27 Identity = 67/128 (52.34%), Postives = 82/128 (64.06%), Query Frame = 0 Query: 49 RSATVVVGPATDIPRGERKIVDTDAGAVIVANVEGSFYAVLAKCPHLGLPMKTGNIAVEGGEPTITCKFHNSKFELATGKCTAWSESVFGIKGTEGIAGFVGGFGGAKDSPATVFPVLTSEEGLVSIE 177 R A VG +IP GERKI V+V N +G+ YA+ KCPHLGLPMKTG I+ +G P I CKFH SKF+L GKC WS V GI GT+ + GF+G GGAK+SPATVF V EG + ++ Sbjct: 40 RMAGEKVGNVNEIPPGERKITKVGDQDVMVVNHKGTVYALSPKCPHLGLPMKTGEISDDG--PCIKCKFHGSKFKLDDGKCVEWSTGVLGIPGTQALGGFIGNVGGAKNSPATVFAVEVDAEGGIIVD 165
BLAST of NO03G05140 vs. NCBI_GenBank
Match: XP_002287415.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94858.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 119.0 bits (297), Expect = 1.500e-23 Identity = 68/162 (41.98%), Postives = 94/162 (58.02%), Query Frame = 0 Query: 17 QFVRTIA-----ALLLAASVSQAFLVPTPTSGRALTSRSATVVVGPATDIPRGERKIVDTDAGAVIVANVEGSFYAVLAKCPHLGLPMKTGNIAVEGGEPTITCKFHNSKFELATGKCTAWSESVFGIKGTEGIAGFVGGFGGAKDSPATVFPVLTSEEGLV 174 +F RT+A L L A+ + F+ P T G +T AT + P+ D G+R+I+D D G ++V V GS+YAV A CPHLGLPMK G ++ +GG PT+TC FHNS FEL TGKCT W G++ I+G +G GG + F + ++ LV Sbjct: 302 KFYRTLAMNTFLLLALLANATHGFVAP-ETMGAHMTRLQATTLSCPSVD--EGQREILDGDNGPILVTKVAGSYYAVDATCPHLGLPMKKGKVSNDGGTPTLTCSFHNSCFELGTGKCTKWVSGALGVE-NGFISGIMGKVGGKQQDVKAYFVMEEADGSLV 459
BLAST of NO03G05140 vs. NCBI_GenBank
Match: XP_005828605.1 (hypothetical protein GUITHDRAFT_153789 [Guillardia theta CCMP2712] >EKX41625.1 hypothetical protein GUITHDRAFT_153789 [Guillardia theta CCMP2712]) HSP 1 Score: 114.4 bits (285), Expect = 3.700e-22 Identity = 54/102 (52.94%), Postives = 67/102 (65.69%), Query Frame = 0 Query: 76 VIVANVEGSFYAVLAKCPHLGLPMKTGNIAVEGGEPTITCKFHNSKFELATGKCTAWSESVFGIKGTEGIAGFVGGFGGAKDSPATVFPVLTSEEGLVSIEV 178 V++ N E + YA+ KCPHLGL +K+G I +G P ITCKFH SKF L TG+C AWS+S GI GT I G VG GG K SPATV+ V EG V +++ Sbjct: 9 VLLVNHENTIYALNPKCPHLGLSLKSGKITDDGQGPVITCKFHQSKFNLKTGECAAWSQSFLGIPGTGIIGGVVGNMGGPKHSPATVYSVEVDGEGSVMVDI 110
BLAST of NO03G05140 vs. NCBI_GenBank
Match: EJK77799.1 (hypothetical protein THAOC_00345 [Thalassiosira oceanica]) HSP 1 Score: 99.0 bits (245), Expect = 1.600e-17 Identity = 47/91 (51.65%), Postives = 58/91 (63.74%), Query Frame = 0 Query: 42 SGRALTSRSATVVVGPATDIPRGERKIVDTDAGAVIVANVEGSFYAVLAKCPHLGLPMKTGNIAVEGGEPTITCKFHNSKFELATGKCTAW 133 SG +L+SRSA + GER+IV G ++V V GS+YAV A CPHL LPMK G I V G+P +TC FHNS FE+ TG+CT W Sbjct: 729 SGASLSSRSAGSTSLSCQPMAEGEREIVKGPNGPILVTKVAGSYYAVDATCPHLNLPMKKGKITVNNGQPALTCNFHNSCFEMKTGRCTQW 819
BLAST of NO03G05140 vs. NCBI_GenBank
Match: KOO22639.1 (ferrochelatase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 94.7 bits (234), Expect = 3.000e-16 Identity = 57/159 (35.85%), Postives = 84/159 (52.83%), Query Frame = 0 Query: 20 RTIAALLLAASVSQAFLVPTPTSGRALTSRSATVVVGPATDIP--RGERKIVDTDAGAVIVANVEGSFYAVLAKCPHLGLPMKTGNIAVEGGEPTITCKFHNSKFELATGKCTAWSESVFGIKGTEGIAGFVGGFGGAKDSPATVFPVLTSEEGLVSIE 177 RT +LL+A+ P G A + ++V A +P +R +VD G ++V V+GS+YAV A CPHLGLPMK G +A T+TC FHNS + + G C W GI+ E AG +G GG K S + + V +++G +++E Sbjct: 6 RTATLILLSAAAGFRAGPRVPPFGHAAAAARSSVACSIAVPVPPADNDRTVVDGPNGPILVTKVKGSYYAVDATCPHLGLPMKRGKVADGADGVTLTCSFHNSCWAMKDGSCKKWVTGALGIE-NEAAAGVMGKLGGQKRSIKS-YKVAVNQDGSLTLE 162
BLAST of NO03G05140 vs. NCBI_GenBank
Match: OLQ07073.1 (hypothetical protein AK812_SmicGene9552 [Symbiodinium microadriaticum]) HSP 1 Score: 89.7 bits (221), Expect = 9.600e-15 Identity = 57/161 (35.40%), Postives = 84/161 (52.17%), Query Frame = 0 Query: 20 RTIAALLLAASVSQA-----FLVPTPTSGRALTSRSATVVVGPATDIPRGERKIVDTDAGAVIVANVEGSFYAVLAKCPHLGLPMKTGNIAVEGGEPTITCKFHNSKFELATGKCTAWSESVFGIKGTEGIAGFVGGFGGAKDSPATVFPVLTSEEGLVSI 176 R A + A V+Q+ F P + +L + A V PA G+R +VD G ++VA ++G +YAV AKCPHL LPMK G I P +TC FHNS+F + G CT W G + + IAG + GG K + + V+ +++G +S+ Sbjct: 47 RIALAAVTIALVTQSLDFAGFRSPARSPRTSLHAVCAQVKEPPA----EGDRVVVDGSDGPIVVAKIDGKYYAVDAKCPHLNLPMKKGKIENGPDGPRLTCNFHNSQFNMKDGLCTRWVTGALGFE-NDFIAGVMSNVGGEKKN-LQAYEVVEADDGSLSV 201
BLAST of NO03G05140 vs. NCBI_GenBank
Match: EJK76789.1 (hypothetical protein THAOC_01432, partial [Thalassiosira oceanica]) HSP 1 Score: 87.4 bits (215), Expect = 4.800e-14 Identity = 41/83 (49.40%), Postives = 49/83 (59.04%), Query Frame = 0 Query: 74 GAVIVANVEGSFYAVLAKCPHLGLPMKTGNIAVEGGEPTITCKFHNSKFELATGKCTAWSESVFGIKGTEGIAGFVGGFGGAK 157 G ++V V GS+YAV A CPHL LPMK G I V G+P +TC FHNS FE+ TG+CT W G E I G + G K Sbjct: 3 GPILVTKVAGSYYAVDATCPHLNLPMKKGKITVNNGQPALTCNFHNSCFEMKTGRCTQWVTGALG-SDNELIGGIMSSVGSEK 84
BLAST of NO03G05140 vs. NCBI_GenBank
Match: XP_005834396.1 (hypothetical protein GUITHDRAFT_162719, partial [Guillardia theta CCMP2712] >EKX47416.1 hypothetical protein GUITHDRAFT_162719, partial [Guillardia theta CCMP2712]) HSP 1 Score: 85.1 bits (209), Expect = 2.400e-13 Identity = 51/131 (38.93%), Postives = 67/131 (51.15%), Query Frame = 0 Query: 60 DIPRGERKIVDTDAGAVIVANVEGSFYAVLAKCPHLGLPMKTGNIAVEGGEP--TITCKFHNSKFEL-ATGKCTAWSESVFGIKGTEGIAGFVGGF----------GGAKDSPATVFPVLTSEEGLVSIEV 178 D+ G+ K+V ++V EG +A KCPHLGL +K G I + C FH SKF L GKC WSESVFGIKGTE I +G F G K +PA V+ V E+G + +++ Sbjct: 64 DVAEGQSKVVTARNIKLVVTKKEGKLFAFNNKCPHLGLSLKRGQITGSDDRHGICVVCPFHKSKFSLEEEGKCKVWSESVFGIKGTESIGNKIGQFVAPMAKSVNPTGEKAAPAAVYGVKV-EDGEILVDL 193 The following BLAST results are available for this feature:
BLAST of NO03G05140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G05140 ID=NO03G05140|Name=NO03G05140|organism=Nannochloropsis oceanica|type=gene|length=1913bpback to top protein sequence of NO03G05140.1 >NO03G05140.1-protein ID=NO03G05140.1-protein|Name=NO03G05140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=178bpback to top Synonyms
Publications
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