NO03G05130, NO03G05130 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G05130 vs. NCBI_GenBank
Match: EWM29945.1 (16s rrna methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 384.0 bits (985), Expect = 8.200e-103 Identity = 240/413 (58.11%), Postives = 265/413 (64.16%), Query Frame = 0 Query: 2 ASTAPAAAVAARRFVLRVTTATLSLTACVAASLPHRTYPAFVPLGASPYGLAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---------FPPVTVDSITRTAWPDLRPAQWKQIEALANLLVEVNAKINVISRKDIQNVVPNHILPALGLASLLRKAPKGTTVLDIGTGGGFPGLPLAIACPQLNLMLVDSTGKKVRAVAEMAEALQLKNVQTRHARIEDVQGQRFDFVVGRSVTAIPRFLAWARPKLKVPREAXXXXXXXXXXXXXXXKEKLEDEFGVPVPGVLYVTGLEPAPPSMKKGRREGGGRDGRMWADEXXXXXXXXXXXXXVFEPDYIYPITELLAPVYKGDKHVFHFSAAKLLSGKVYFAEEMGGRGGRREGGG 406 AST P AAR FVL TTATLSL ACV P+R+YPAFV A P GL + P+ VD+ T+ AWPDLRPAQWKQIEALANLLVE+N KINVISRKDIQNV+PNHILPALGLA+LLRKAP GT+VLDIGTGGGFPGLPLAIACPQLNL+LVD+TGKK+RAVA M+ L LKNV T HARIE+VQGQRFD+VVGRSVTAIPRFL WA+PKLKVPR+ K LEDEFGVPVPGVLYVTGLEP PS K R GG XXXXXXXXXXXXX PD++YP+ LL PVY+GDKHVFHFSAA L+ G+V+ E GGRGGRREG G Sbjct: 6 ASTVPIK--AARHFVLLATTATLSLAACVLNHRPYRSYPAFVSRSAPPRGLLGSIKHEQNIPDPFTTRCQHFVQFPGHIEGKDSHKDVHIRHKFACRSHAGSGANQENVNTGGTDLGGLPQAPIVVDAKTKEAWPDLRPAQWKQIEALANLLVEINTKINVISRKDIQNVLPNHILPALGLATLLRKAPAGTSVLDIGTGGGFPGLPLAIACPQLNLLLVDATGKKIRAVAAMSARLNLKNVATLHARIEEVQGQRFDYVVGRSVTAIPRFLRWAQPKLKVPRQG---GRGREKTGESEEKGPLEDEFGVPVPGVLYVTGLEPT-PSTKMAR--GGXXXXXXXXXXXXXXXXXXXXXXXXCVPDHVYPVQALLGPVYEGDKHVFHFSAAALVKGRVFVPEWEGGRGGRREGNG 410
BLAST of NO03G05130 vs. NCBI_GenBank
Match: EWM28780.1 (16s rrna methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 196.1 bits (497), Expect = 3.200e-46 Identity = 116/275 (42.18%), Postives = 154/275 (56.00%), Query Frame = 0 Query: 123 RTAWPDLRPAQWKQIEALANLLVEVNAKINVISRKDIQNVVPNHILPALGLASLLRKAPKGTTVLDIGTGGGFPGLPLAIACPQLNLMLVDSTGKKVRAVAEMAEALQLKNVQTRHARIEDVQGQRFDFVVGRSVTAIPRFLAWARPKLKVPREAXXXXXXXXXXXXXXXKEKLEDEFGVPVPGVLYVTGLEPAPPSMKKGRREGGGRDGRMWADEXXXXXXXXXXXXXVFEPDYIYPITELL-APVYKGDKHVFHFSAAKLLSGKVYFAEEMGG 397 + +P+L P QW+++E L L+ E N K+NVISRKD++NV+ +H+LP +G++ LL KA +GT V+D+GTGGGFPGLPLAI CPQ+ LVDS GKKVR V +MA L L+NV+ RH R+E+V+ +RF+FV GRSVTA+PRF+ W + KL A GVP G+LY+ G S + + GG + P YPI EL+ VY GDK V HFS L G A+ GG Sbjct: 65 KARFPELTPVQWERLERLGALVQEWNCKVNVISRKDVENVLSHHVLPCMGISKLLSKAAEGTKVMDVGTGGGFPGLPLAICCPQVKFWLVDSIGKKVRVVGDMAVRLGLQNVRVRHTRVEEVR-ERFNFVTGRSVTAMPRFVGWVKDKLHAAPSAPLK--------------------GVPDDGILYIKG----GVSDETQEEDLGG-----------------------WMPTGRYPIGELIGGDVYGGDKSVLHFSVQDLRRGPDANAKGRGG 291
BLAST of NO03G05130 vs. NCBI_GenBank
Match: PKP46656.1 (16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Bacteroidetes bacterium HGW-Bacteroidetes-11]) HSP 1 Score: 153.3 bits (386), Expect = 2.300e-33 Identity = 77/146 (52.74%), Postives = 104/146 (71.23%), Query Frame = 0 Query: 126 WPDLRPAQWKQIEALANLLVEVNAKINVISRKDIQNVVPNHILPALGLASLLRKAPKGTTVLDIGTGGGFPGLPLAIACPQLNLMLVDSTGKKVRAVAEMAEALQLKNVQTRHARIEDVQGQRFDFVVGRSVTAIPRFLAWARPKL 272 +P+L Q Q EA+ L E NA INVISRKD++++ HIL ALG+A ++R AP GTT+LD+GTGGGFPG+PLA+ P++N L+DS GKK++ V + EAL L NV + R+EDV ++FDFVV R+VTA+P FL W R + Sbjct: 8 FPELTAVQISQFEAMKGLYEEWNAAINVISRKDMEHLYERHILHALGIAKVIRFAP-GTTILDVGTGGGFPGIPLAVLFPEVNFHLIDSIGKKIKVVKAVTEALSLTNVTSAQVRVEDVP-EKFDFVVSRAVTAMPEFLYWVRKNI 151
BLAST of NO03G05130 vs. NCBI_GenBank
Match: OFZ27364.1 (16S rRNA (guanine(527)-N(7))-methyltransferase [Bacteroidetes bacterium RIFCSPHIGHO2_02_FULL_44_7]) HSP 1 Score: 150.6 bits (379), Expect = 1.500e-32 Identity = 80/151 (52.98%), Postives = 107/151 (70.86%), Query Frame = 0 Query: 126 WPDLRPAQWKQIEALANLLVEVNAKINVISRKDIQNVVPNHILPALGLASLLRKAPKGTTVLDIGTGGGFPGLPLAIACPQLNLMLVDSTGKKVRAVAEMAEALQLKNVQTRHARIEDVQGQRFDFVVGRSVTAIPRFLAWARPK-LKVPR 276 +PDL Q +Q +AL L NA+INVISRKD +N H+L AL +A +++ P GT +LDIGTGGGFPG+PLAI P+ + +LVDS GKK++ V E+A AL LKNV+ HAR E V+ ++FDFV+ R+VTA+P F+ W + K LKV R Sbjct: 11 FPDLTAEQMRQFDALQELYAHWNAQINVISRKDTENFYERHVLHALAIAKVIQFVP-GTQLLDIGTGGGFPGIPLAILFPECDFLLVDSIGKKIKVVDEVASALGLKNVRGLHARAEQVE-EQFDFVISRAVTAMPTFINWTKGKFLKVDR 159
BLAST of NO03G05130 vs. NCBI_GenBank
Match: GAK76874.1 (rRNA small subunit methyltransferase [Nonlabens ulvanivorans]) HSP 1 Score: 150.2 bits (378), Expect = 2.000e-32 Identity = 76/163 (46.63%), Postives = 109/163 (66.87%), Query Frame = 0 Query: 116 VTVDSITRTAWPDLRPAQWKQIEALANLLVEVNAKINVISRKDIQNVVPNHILPALGLASLLR------KAPKGTTVLDIGTGGGFPGLPLAIACPQLNLMLVDSTGKKVRAVAEMAEALQLKNVQTRHARIEDVQGQRFDFVVGRSVTAIPRFLAWARPKLK 273 +TV I + +P L Q +Q L +L + N++INVISRKDI + H+L +LG+A ++R P GT V+D+GTGGGFPG+PLAI P+ N L+D+ GKK++ V + EALQLKNV T+H R E V+G +FDF+V R+VT +P F++W R K++ Sbjct: 1 MTVHQIIKNYFPHLSDHQMEQFAQLGDLYAKWNSQINVISRKDIDQLYTRHVLHSLGIACVVRFRESLPNTPGGTRVMDVGTGGGFPGIPLAIMFPKTNFHLIDAIGKKIKVVDAVVEALQLKNVTTQHGRAEKVKG-KFDFIVSRAVTNMPDFVSWTRNKIR 162
BLAST of NO03G05130 vs. NCBI_GenBank
Match: WP_052594823.1 (16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Aureispira sp. CCB-QB1]) HSP 1 Score: 150.2 bits (378), Expect = 2.000e-32 Identity = 72/143 (50.35%), Postives = 109/143 (76.22%), Query Frame = 0 Query: 126 WPDLRPAQWKQIEALANLLVEVNAKINVISRKDIQNVVPNHILPALGLASLLRKAPKGTTVLDIGTGGGFPGLPLAIACPQLNLMLVDSTGKKVRAVAEMAEALQLKNVQTRHARIEDVQGQRFDFVVGRSVTAIPRFLAWAR 269 +PDL P Q +Q+ L +L + N+KINVISRKDI+N+ P+H+L ++GLA + + G+ V+D+GTGGGFPG+PLAI P+++ +LVDS GKKVR E+A+A+ L+NV+T+ AR E+++ ++FDFVV R+V +P+ +AW R Sbjct: 8 FPDLSPTQIEQLSQLGDLYTDWNSKINVISRKDIENIYPHHVLHSMGLAKVF-QFKDGSKVMDLGTGGGFPGIPLAILFPKVDFLLVDSIGKKVRVTQEVADAIGLENVRTQQARAEELK-EKFDFVVTRAVAVLPKLVAWTR 148
BLAST of NO03G05130 vs. NCBI_GenBank
Match: PID67526.1 (16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Flavobacteriia bacterium]) HSP 1 Score: 149.1 bits (375), Expect = 4.400e-32 Identity = 75/146 (51.37%), Postives = 101/146 (69.18%), Query Frame = 0 Query: 126 WPDLRPAQWKQIEALANLLVEVNAKINVISRKDIQNVVPNHILPALGLASLLRKAPKGTTVLDIGTGGGFPGLPLAIACPQLNLMLVDSTGKKVRAVAEMAEALQLKNVQTRHARIEDVQGQRFDFVVGRSVTAIPRFLAWARPKL 272 +P+L P Q KQ EAL +L + N KINV+SRKD+ + H+L ALG+A ++ P G V D+GTGGGFPG+PLAI P++ LVDS GKK+R V E+ E LQL NV+T H+RIEDV + FD++V R+V + F+ W RPK+ Sbjct: 8 FPNLTPQQVKQFEALESLYKDWNQKINVVSRKDVDELYLRHVLHALGIAKVI-TFPTGARVADVGTGGGFPGIPLAIMFPEVQFTLVDSIGKKIRVVNEVVEGLQLNNVKTYHSRIEDVP-ETFDYIVSRAVARMDAFVRWTRPKI 151
BLAST of NO03G05130 vs. NCBI_GenBank
Match: WP_008584190.1 (16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Niabella soli] >AHF15370.1 16S rRNA methyltransferase [Niabella soli DSM 19437]) HSP 1 Score: 148.3 bits (373), Expect = 7.500e-32 Identity = 73/145 (50.34%), Postives = 103/145 (71.03%), Query Frame = 0 Query: 128 DLRPAQWKQIEALANLLVEVNAKINVISRKDIQNVVPNHILPALGLASLLRKAPKGTTVLDIGTGGGFPGLPLAIACPQLNLMLVDSTGKKVRAVAEMAEALQLKNVQTRHARIEDVQGQRFDFVVGRSVTAIPRFLAWARPKLK 273 D PAQ +Q +AL +L + N KINVISRKDI ++ H+L +LG+A+L P G ++D+G GGGFPGLPLAI P+ +LVDS GKK++ V +AEA+ LKN+QTRH+RIED++ ++FDFVV R+V + W++P +K Sbjct: 10 DFTPAQLEQFKALEDLYKDWNEKINVISRKDIGSLYERHVLHSLGIAALFNFKP-GMQIVDLGAGGGFPGLPLAIFFPETEFLLVDSIGKKLKVVDGIAEAIGLKNIQTRHSRIEDIKNKQFDFVVSRAVAPLKSLWQWSKPLIK 153
BLAST of NO03G05130 vs. NCBI_GenBank
Match: WP_036584224.1 (16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Nonlabens ulvanivorans] >KEZ92863.1 16S rRNA methyltransferase [Nonlabens ulvanivorans] >GAL00246.1 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB [Nonlabens ulvanivorans]) HSP 1 Score: 148.3 bits (373), Expect = 7.500e-32 Identity = 75/158 (47.47%), Postives = 106/158 (67.09%), Query Frame = 0 Query: 121 ITRTAWPDLRPAQWKQIEALANLLVEVNAKINVISRKDIQNVVPNHILPALGLASLLR------KAPKGTTVLDIGTGGGFPGLPLAIACPQLNLMLVDSTGKKVRAVAEMAEALQLKNVQTRHARIEDVQGQRFDFVVGRSVTAIPRFLAWARPKLK 273 I + +P L Q +Q L +L E N++INVISRKDI + H+L +LG+A ++R P GT V+D+GTGGGFPG+PLAI P+ N L+D+ GKK++ V + EALQLKNV T+H R E V+G +FDF+V R+VT +P F++W R K++ Sbjct: 4 IIKNYFPHLSDHQMEQFAQLGDLYAEWNSQINVISRKDIDQLYTRHVLHSLGIACVVRFRESLPNTPGGTRVMDVGTGGGFPGIPLAIMFPKTNFHLIDAIGKKIKVVDAVVEALQLKNVTTQHGRAEKVKG-KFDFIVSRAVTNMPDFVSWTRNKIR 160
BLAST of NO03G05130 vs. NCBI_GenBank
Match: WP_042296924.1 (16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Nonlabens ulvanivorans]) HSP 1 Score: 148.3 bits (373), Expect = 7.500e-32 Identity = 75/158 (47.47%), Postives = 106/158 (67.09%), Query Frame = 0 Query: 121 ITRTAWPDLRPAQWKQIEALANLLVEVNAKINVISRKDIQNVVPNHILPALGLASLLR------KAPKGTTVLDIGTGGGFPGLPLAIACPQLNLMLVDSTGKKVRAVAEMAEALQLKNVQTRHARIEDVQGQRFDFVVGRSVTAIPRFLAWARPKLK 273 I + +P L Q +Q L +L E N++INVISRKDI + H+L +LG+A ++R P GT V+D+GTGGGFPG+PLAI P+ N L+D+ GKK++ V + EALQLKNV T+H R E V+G +FDF+V R+VT +P F++W R K++ Sbjct: 4 IIKNYFPHLSDHQMEQFAQLGDLYAEWNSQINVISRKDIDQLYTRHVLHSLGIACVVRFRESLPNTPGGTRVMDVGTGGGFPGIPLAIMFPKTNFHLIDAIGKKIKVVDAVVEALQLKNVTTQHGRAEKVKG-KFDFIVSRAVTNMPDFVSWTRNKIR 160 The following BLAST results are available for this feature:
BLAST of NO03G05130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G05130 ID=NO03G05130|Name=NO03G05130|organism=Nannochloropsis oceanica|type=gene|length=2176bpback to top protein sequence of NO03G05130.1 >NO03G05130.1-protein ID=NO03G05130.1-protein|Name=NO03G05130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=588bpback to top Synonyms
Publications
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