NO03G05100, NO03G05100 (gene) Nannochloropsis oceanica

Overview
NameNO03G05100
Unique NameNO03G05100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3015
Alignment locationchr3:1443633..1446647 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1443633..1446647 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO03G05100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05100.1NO03G05100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|635895gene_1718Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05100.1NO03G05100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05100 ID=NO03G05100|Name=NO03G05100|organism=Nannochloropsis oceanica|type=gene|length=3015bp
CAGCAGAATATCCTCGCATCCCACCAACAAAATGCGCATCTTCGCCTCCA
TCGTGACAGTGGCCGGGCTTGTTGCTGTCGCCTCGGCCGACATCAACGCG
TGCCCCTCCCGTGCTTTGCTCCACACCCGCGGCGGCGGCTTCTTTGACAA
GCTCGACGCCAAAATCTCCTCCTGGACCAAGAGCGGCAATGATgtacgta
ccaaagtcgtgcggaatgctcggcatcagcagcagtgtcaaagcgcagaa
gaagatttgttctgtctccacctgacgcatttttatccacgtcttttctt
ccctccagGCTATGGACAAGGCCTCCAAGTCGATTGACTCGGCCTCAGAC
AAGGCCCAAAAAGGTATCGATCAGGCGGACGCCAAGTTCAAGAAGGTCCA
GATGGATGCTGAGgtaaggcaacgtgaaacagtacgaggccagtgatgtt
gaagtttgcggggcccgagcacgagtagcagaggacgggcagacaggcac
gacaagtggatcgtgatccaagaggcaatgtgtggtttgaaaaagtgcct
caagaagggcatgttctttgtgaggcgcctgcattcaatttttagtggtc
tgggccgggcaagattccccttcctttttgctttcgcacacacacacacc
catacccccttcttttcactaacttccccaaaaaaacacagTCCAAGGCC
AAGAAATTGGCAGACGACGCAAAGGCCAGGTCCGAGAAGGTGAAGGCAGA
TGCAAAGgtacgtgcaagaagcatacaaattaaaaagatggagtctgggg
ccacgcagataaaacggaaccaagaacgccgcctaagcgtacggtccctc
ccccctatgcgttctcctttccttctttccttttcatcaatacctttcta
ccgtcacctggcaccaacatgcctctcttcctcccctctctttcttcctg
cctctttccttcccctacacatattcagATGAAGGCCCAGAAGGTGGCAG
ATGAGGCGAAAGCCAAGGCGGAGAGGCTCAAGGCGGAAGCCAAGgtttgt
ttattttcatacgaatacttatcatttcccctctcttccttgtcttcctc
tctcacactcactactgctttccctccctctctcccttcctaccatcgtt
tctcctaaaccaaccaaccgtccgtccctccttaatcccccacgcattcg
tagGCGGCTTCGGAGAAGGCCAAGGCCCGATTGGAAGAGCAGAAGAAGAG
GGCACGTGAGGCAGCCGATAAAGCGGACAAGGAAGCGAATCGCCTCGCCG
ACCAAGCAAAGCAGAAGAAGTCTGACTTGAAGGCGTCTGCGAAAAAAGCG
GAATCGGCCGTGGATGACGGGATTGAGAAGGCCCGTGGTATTTTTGCGGG
AATCAAGGGATGGTTTAATTAGGATGTGAGAGGGGCAGATGGCACTGCAG
GAGGTCGGAAAGAGGGAGGCAGGGAGGGAGGGGAGGAAAACCAGAGTAAA
AATGGCAGGGCTATACCCATGAGCGGCGAAGGGGTCGAAACAGCCCTCGT
CAGAGATGGAACTCAAGAAAAGCGATTTCCATACAGTTGAATACACAAAA
ACATGTGAATTCAGTAGGAAGAACAACCAACCTCGTTTATCCCATTCTCA
TCAATTATTGCTTTTGTTGTTGTGTCGTTCACTCGGTCGCCCTATTCCCT
TCCTTACCTTCGCCCCCTCCCTAGGCGTGTGGATTGGGATACCACGCCCT
GGGGTCGTTCTCGGGCCGACCTGTGAAGGTGGTGGCCCATACGTCTACGT
CCATCTCTTGTGCAAATGCCGCCGCATCAAAGGAGGCAGGGAGGGAGGGA
GGGGCCATGGCGAAGATGGACGTGCCACTGCCGGACATCATCACGGCGGC
GAACCCTTTCGAGAGCAGAGACTCTTTGATTGTTTTGAGGCCAGGAATGC
ACTGGAAGGCGGGAGGCTCCAGGTCGTTGACATATAGAGAGGGAGGGACA
GGCTCGCCCTTACCGAGGCGGGTGGTGAAAGCGGAGAGGAGGGCCCGAGG
ATCTTCTTTACTCAGGGCATTTAAATCAAGCGCTTTGAAAACTGCGGGGG
TAGAAAGACCGATGGGCGGCTTGACGATATAGAGGTGTGTGGAGGGGGAT
AGGGCGGGGACGGGTTCGAGTATTTCGCCGCGACCAGTGCAATATGCTGT
GCCCTGGGAGAGGAAAAATGTTATGTCGGAGCCTAGCTCCTTAGACCACT
CGATCAGGTCTTCATCACTGGCGGGGCAGCCGAGGAGTTGGTTGGCTGCG
AATAACGTTGTGGCGGCATTGCTGCTCCCACCACCGAGACCGGCTTGGAC
GGGGGTGCGTTTCTCGAGGTAGACTTGGAAGTGGCGAGTCTTGCCTGTCT
TACGACGAAAGAGGTCGAGCGCCCGCAAGACCAAGTTACTCTTGTCCGTG
ACGAGGGATGTGAACGAAGAGGCGAATTCATCTTGCGTGGCCGAGGCGGG
GAGGGCTTTGAAGAGTAAAGTGTCCCCAAAGGCGACGGTTTGGAAGAGGG
AGGCTAGCTCGTGGTAGCCGTCTTCACGACGGCGGATGATGCGGAGAAAG
AGGTTGACCTTGGCGGGCGAAAAGAGTTCGAGGTCAAAGTTGCCTTCTTT
TCTTCTTGACTCGAGAGAGGAGGATGGAGTGCCAGCCACAACAAAGAGGC
GTGCCCTGGTGGAGGAGGGGAGGGACATGGCGGTCCTGGGCGCAAAGGAG
GAGGGGGAGGTGGCATGTCCAAGCCCGTTCCCGTTTAGCGGCGGAGCAAA
AGCAGTGGTAGGATCGGGGAGGAGAAGGACGAGACATGCGACGAGGAGGC
AGGCCGACGGTGGTAGTTGCCAACGCCGCTGCTGCTGTGCCATGATCTAT
TAGTGGTATGCGTGTGTGTTTGGTTGTGAAAGGTGGAAAGCATTTGCATC
GTGATTGGAGGCCGTTGCCGTCCAAGTGAGAAAAGCAACCTCCCCATTTC
AAACGCAAAGTGCAC
back to top

protein sequence of NO03G05100.1

>NO03G05100.1-protein ID=NO03G05100.1-protein|Name=NO03G05100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=206bp
MRIFASIVTVAGLVAVASADINACPSRALLHTRGGGFFDKLDAKISSWTK
SGNDAMDKASKSIDSASDKAQKGIDQADAKFKKVQMDAESKAKKLADDAK
ARSEKVKADAKMKAQKVADEAKAKAERLKAEAKAASEKAKARLEEQKKRA
REAADKADKEANRLADQAKQKKSDLKASAKKAESAVDDGIEKARGIFAGI
KGWFN*
back to top
Synonyms
Publications