NO03G05090, NO03G05090 (gene) Nannochloropsis oceanica

Overview
NameNO03G05090
Unique NameNO03G05090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2736
Alignment locationchr3:1440375..1443110 +

Link to JBrowse

Properties
Property NameValue
DescriptionRing-finger-containing e3 ubiquitin
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1440375..1443110 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
Vocabulary: INTERPRO
TermDefinition
IPR031127E3_UB_ligase_RBR
IPR002867Znf_C6HC
IPR001841Znf_RING
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO03G05090 vs. NCBI_GenBank
Match: EWM29954.1 (ring-finger-containing e3 ubiquitin [Nannochloropsis gaditana])

HSP 1 Score: 508.4 bits (1308), Expect = 3.700e-140
Identity = 237/380 (62.37%), Postives = 277/380 (72.89%), Query Frame = 0
Query:  273 GNLSALGEITRHVSQSFQLTVDIVKTHLGEELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCETPVLGDPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNV-RGCPNMQMQEDVAPPSPSHIRWMKVVSFLQLVFVGPAAFVLGTVFYLLCFPCFLFKCIG-------QREREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQYTGCVSFWGNTLLGLLLIPFFL 645
            G+LS LG+I RHVSQSFQ+++DIVKTHLGEELVFC +CREYE VSKT+RL  CGHR+CR CF SYLECKI EGQ+ PTCF+SE+    GRE  GRR    IP PCA  V E D+  LV  ETW KYERFKFQK +RN R+CP+C++  LGD E+P M C KCG+ FCYFH++AH  +SCTEYEQ  HEE L+NQAMIS+ AKPCPGCGNPVEK+GGCNQM CVWCG++WCWLCGK VD GTFP+HFQWWNV  GCPNMQMQED+ PP PSHIR +K +S LQL+F+GPAAFV+GT  Y+ CFPCFLFKC+G       +RE E                                   YTGC+SFWGNTL+  LLIPFF+
Sbjct:  179 GSLSTLGKIGRHVSQSFQMSLDIVKTHLGEELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGRE--GRRYRT-IPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENE--------------------------EGGRQLRAHYTGCISFWGNTLVAFLLIPFFV 529          
BLAST of NO03G05090 vs. NCBI_GenBank
Match: XP_005853674.1 (ring-finger-containing e3 ubiquitin, partial [Nannochloropsis gaditana CCMP526] >EKU22688.1 ring-finger-containing e3 ubiquitin, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 496.9 bits (1278), Expect = 1.100e-136
Identity = 231/370 (62.43%), Postives = 269/370 (72.70%), Query Frame = 0
Query:  273 GNLSALGEITRHVSQSFQLTVDIVKTHLGEELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCETPVLGDPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNV-RGCPNMQMQEDVAPPSPSHIRWMKVVSFLQLVFVGPAAFVLGTVFYLLCFPCFLFKCIG-------QREREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQYTGCVSFWGNTL 635
            G+LS LG+I RHVSQSFQ+++DIVKTHLGEELVFC +CREYE VSKT+RL  CGHR+CR CF SYLECKI EGQ+ PTCF+SE+    GRE  GRR    IP PCA  V E D+  LV  ETW KYERFKFQK +RN R+CP+C++  LGD E+P M C KCG+ FCYFH++AH  +SCTEYEQ  HEE L+NQAMIS+ AKPCPGCGNPVEK+GGCNQM CVWCG++WCWLCGK VD GTFP+HFQWWNV  GCPNMQMQED+ PP PSHIR +K +S LQL+F+GPAAFV+GT  Y+ CFPCFLFKC+G       +RE E                                   YTGC+SFWGNTL
Sbjct:   49 GSLSTLGKIGRHVSQSFQMSLDIVKTHLGEELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGRE--GRRYRT-IPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENE--------------------------EGGRQLRAHYTGCISFWGNTL 389          
BLAST of NO03G05090 vs. NCBI_GenBank
Match: OQR96619.1 (RING-finger-containing E3 ubiquitin ligase, partial [Thraustotheca clavata])

HSP 1 Score: 266.2 bits (679), Expect = 3.200e-67
Identity = 147/328 (44.82%), Postives = 178/328 (54.27%), Query Frame = 0
Query:  259 SHTGTNS-VDGNNSYGNLSALGEITRHVSQSFQLTVDIVKTHLGEELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCETPVLG-DPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSF----LQLVFVGPAAFVLGTVFYLL---CFPCFL 578
            S +GT S + GN     +S    I    S S  L + + +T       +C IC EY  VS T+ LS CGHRFC  C  +YLE KI +G + P CF+     G                PC   +   DI+ LV    + KYE+FKF K + + R CP+C    +G  P  P MEC KC + FCY HSNAH   SC EYE +M  EE  NQA IS  +KPCPGC NPVEK GGCNQM C+ CG H+CWLCGK VD G FP HFQWWN+RGC   QM E  A   PS     K++SF    L     GP AFV+   F +L   C PCF+
Sbjct:  416 SMSGTESAILGNEENNRMSMTNPIELIRSVSSILGMGMAET------TYCQICLEYVDVSSTYPLSACGHRFCVECINAYLESKINDGLIHPKCFYMPTATGDTE-----------AQPCQVLITSDDIQTLVSTSVYEKYEKFKFVKTHADARECPFCNFVQVGRGPNDPVMECIKCSKIFCYTHSNAHPTTSCIEYEVKMRAEEKINQAKISQISKPCPGCKNPVEKNGGCNQMKCIQCGCHFCWLCGKKVDGGVFPEHFQWWNLRGCAGAQMSE-TASEGPS--TCSKLLSFSWRILLCAIFGPPAFVMAVTFSILSCCCIPCFM 723          
BLAST of NO03G05090 vs. NCBI_GenBank
Match: XP_012212395.1 (hypothetical protein SPRG_17370 [Saprolegnia parasitica CBS 223.65] >KDO16895.1 hypothetical protein SPRG_17370 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 262.3 bits (669), Expect = 4.600e-66
Identity = 137/284 (48.24%), Postives = 165/284 (58.10%), Query Frame = 0
Query:  303 ELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCETPVLGD-PEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSF-----LQLVFVGPAAFVLGTVFYLL---CFPCFL 578
            E  +C IC EY  V+ T  LS CGHRFC  C   YL  KI +G V P CFF++   G GR             PC   +   DI+ALV  + + KYE+F F K + + R CP C    +G+ P+ P M+C +CG  FCY HSNAH   +C EYE +M  E+  NQA IS  +KPCPGC +PVEK GGCNQM CV CG H+CWLCG+ VD G FP HFQWWN+RGC   QM E  A   PS +   K+VSF     L LVF GP A  L   F +L   C PC L
Sbjct:   11 ETSYCQICLEYVDVASTVALSVCGHRFCADCIHGYLASKISDGLVAPKCFFAD---GDGR-------------PCEALIPPSDIQALVSTDVFEKYEKFNFIKAHADARECPHCHVLQVGNGPDDPHMDCTQCGEAFCYTHSNAHPHSTCLEYEAKMRAEDKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWNLRGCAGAQMSE-TAVEGPSTL--SKIVSFSWRLLLCLVF-GPPALALTLAFSVLGCCCIPCCL 274          
BLAST of NO03G05090 vs. NCBI_GenBank
Match: XP_012206935.1 (hypothetical protein SPRG_11364 [Saprolegnia parasitica CBS 223.65] >KDO22412.1 hypothetical protein SPRG_11364 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 261.9 bits (668), Expect = 6.000e-66
Identity = 144/321 (44.86%), Postives = 176/321 (54.83%), Query Frame = 0
Query:  267 DGNNSYGNLSALGEITRHVSQSFQLTVDIVKTHLG---EELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCETPVLGD-PEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSF---LQLVFVGPAAFVLGTVFYLL---CFPCFL 578
            + NN+  N+S  G        S    +  + T LG    E  +C IC EY  V+ T  LS CGHRFC  C   YL  KI +G V P CFF++   G GR             PC   +   DI+ALV  + + KYE+F F K +   R CP C    +G+ P+ P M+C +CG  FCY HSNAH   +C EYE +M  E+  NQA IS  +KPCPGC +PVEK GGCNQM CV CG H+CWLCG+ VD G FP HFQWWN+RGC   QM E  A   PS +  M   S+   L LVF GP A  L   F +L   C PC L
Sbjct:   12 NANNNSINMSMSGRALGDERNSLSF-LRSMSTMLGLGMAETSYCQICLEYVDVASTVALSVCGHRFCADCIHGYLASKISDGLVAPKCFFAD---GDGR-------------PCEALIPPSDIQALVSTDVFEKYEKFNFIKAHAGARECPHCHVLQVGNGPDDPHMDCTQCGEAFCYTHSNAHPHSTCLEYEAKMRAEDKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWNLRGCAGAQMSE-TAVEGPSTLSKMVAFSWRILLCLVF-GPPALALTLAFSILGCCCIPCCL 313          
BLAST of NO03G05090 vs. NCBI_GenBank
Match: OQR83287.1 (RING-finger-containing E3 ubiquitin ligase [Achlya hypogyna])

HSP 1 Score: 258.1 bits (658), Expect = 8.600e-65
Identity = 134/282 (47.52%), Postives = 158/282 (56.03%), Query Frame = 0
Query:  303 ELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCETPVLG-DPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAP-PSPSHIRWMKVVSF----LQLVFVGPAAFVLGTVFYLL---CFPC 576
            E  +C IC EY  V  TF LS CGHRFC  C   YL  KI +G V P CFF               T     PPC   +   DI+ALV  + + KYE+FKF K + + R CP+C    +G  P+ P ++C  C   FCY HSNAH   +C EYE +M  EE  NQA IS  +KPCPGC +PVEK GGCNQM CV CG H+CWLCG+ VD G FP HFQWWN+RGC   QM E  A  PS +     KV SF    L  +  GP A  L  VF +L   C PC
Sbjct:  140 ETSYCQICLEYVNVHTTFPLSACGHRFCVECLNGYLASKIKDGLVTPQCFF---------------TAADGAPPCGVAIATSDIQALVPVDLFDKYEKFKFIKTHADARECPYCHHVQVGRGPDDPVIDCAACHETFCYTHSNAHPTSTCLEYEAKMRAEEKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWNLRGCAGAQMSESAADGPSTA----AKVASFTWRILLCLIFGPPALALTLVFSVLSCCCIPC 402          
BLAST of NO03G05090 vs. NCBI_GenBank
Match: XP_008604055.1 (hypothetical protein SDRG_00360 [Saprolegnia diclina VS20] >EQC42632.1 hypothetical protein SDRG_00360 [Saprolegnia diclina VS20])

HSP 1 Score: 257.7 bits (657), Expect = 1.100e-64
Identity = 129/281 (45.91%), Postives = 160/281 (56.94%), Query Frame = 0
Query:  303 ELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCETPVLGD-PEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSF--LQLVFVGPAAFVLGTVFYLL---CFPCFL 578
            E  +C IC EY  ++ T  LS CGHRFC  C   YL  KI +G + P CFF++          G     +IPP         D++ALV  E + KYE+FKF K + + R CP C    +G+ P+ P M+C +CG  FCY HSNAH   +C  YE +M  E+  NQA IS  +KPCPGC +PVEK GGCNQM CV CG H+CWLCG+ VD G FP HFQWWN+RGC   QM E  A   PS +  M   S+  L  +  GP A  L   F +L   C PC L
Sbjct:  162 ETSYCQICLEYVDIASTVALSVCGHRFCADCIHGYLANKIADGLIAPKCFFADS--------DGHPCEAVIPP--------SDVQALVSTEVFEKYEKFKFIKAHADARECPHCHLLQVGNGPDDPHMDCMQCGESFCYTHSNAHPNSTCLAYEAKMRAEDKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWNLRGCAGAQMSE-TAVEGPSTVSKMLSFSWRILLCLLFGPPALALTLAFSILSCCCIPCCL 425          
BLAST of NO03G05090 vs. NCBI_GenBank
Match: XP_009519281.1 (hypothetical protein PHYSODRAFT_487639 [Phytophthora sojae] >EGZ23993.1 hypothetical protein PHYSODRAFT_487639 [Phytophthora sojae])

HSP 1 Score: 252.7 bits (644), Expect = 3.600e-63
Identity = 124/277 (44.77%), Postives = 154/277 (55.60%), Query Frame = 0
Query:  302 EELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCE-TPVLGDPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSFLQLVFVGPAAFVLGTVFYLLCFPCFL 578
            EE   C IC +Y  VS ++ L+GCGH FC  C  +YLE KI EGQV P CFF                       C   +   DI++LV  E W KY +FKF K++   R CP+C+ + +    + PE  C  C R FC+ HSNAH GR+C EY+++M   E  N A+IS  +KPCPGC N VEK GGCNQM CV C   +CW+C K +D   FP HFQWWNVRGC   QM  D+     +      V+  L  V  GP AFVL  VF +LC  CFL
Sbjct:  201 EETFLCQICYDYAPVSTSYALTGCGHTFCEACLKNYLEFKIKEGQVYPKCFFENSDDKAA---------------CKADIVVDDIQSLVSDEVWQKYNKFKFNKEHELARQCPYCDHSQICAGSDHPECVCEACSREFCFVHSNAHQGRTCAEYDKQMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDSVFPEHFQWWNVRGCAGNQM-ADIEGQGTTQKGIGMVMRILFFVLFGPPAFVLAVVFCILCC-CFL 460          
BLAST of NO03G05090 vs. NCBI_GenBank
Match: ETI50061.1 (hypothetical protein F443_06310 [Phytophthora parasitica P1569] >ETL43359.1 hypothetical protein L916_06122 [Phytophthora parasitica] >ETP19832.1 hypothetical protein F441_06317 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 250.4 bits (638), Expect = 1.800e-62
Identity = 124/282 (43.97%), Postives = 156/282 (55.32%), Query Frame = 0
Query:  302 EELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFF--SEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCE-TPVLGDPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSFLQLVFVGPAAFVLGTVFYLLCFPCFLFKC 581
            EE   C IC +Y  V+ ++ LS CGH FC  C  +YLE KI EGQV P CFF  SED                    C   +   DI++LV  E W KY +FKF K++   R CP+C+ + +    + PE  C  C R FC+ HSNAH GR+C EY+++M   E  N A+IS  +KPCPGC N VEK GGCNQM CV C   +CW+C K +D   FP HFQWWNVRGC   QM  D+     +      V+  L  V  GP AFV+  VF ++C  CF   C
Sbjct:  244 EETFLCQICYDYASVNTSYGLSVCGHTFCEACLRNYLEFKIKEGQVYPKCFFEKSED-----------------KVACKAEISVDDIQSLVSDEIWQKYNKFKFNKEHELARQCPYCDHSQICAGSDHPECVCEACNREFCFVHSNAHQGRTCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDTVFPEHFQWWNVRGCAGNQM-ADIEGQGATQKGIGLVMRILFFVIFGPPAFVMAVVFSIMC--CFFLPC 505          
BLAST of NO03G05090 vs. NCBI_GenBank
Match: ETK89961.1 (hypothetical protein L915_06184 [Phytophthora parasitica])

HSP 1 Score: 250.4 bits (638), Expect = 1.800e-62
Identity = 124/282 (43.97%), Postives = 156/282 (55.32%), Query Frame = 0
Query:  302 EELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFF--SEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCE-TPVLGDPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSFLQLVFVGPAAFVLGTVFYLLCFPCFLFKC 581
            EE   C IC +Y  V+ ++ LS CGH FC  C  +YLE KI EGQV P CFF  SED                    C   +   DI++LV  E W KY +FKF K++   R CP+C+ + +    + PE  C  C R FC+ HSNAH GR+C EY+++M   E  N A+IS  +KPCPGC N VEK GGCNQM CV C   +CW+C K +D   FP HFQWWNVRGC   QM  D+     +      V+  L  V  GP AFV+  VF ++C  CF   C
Sbjct:  244 EETFLCQICYDYASVNTSYGLSVCGHTFCEACLRNYLEFKIKEGQVYPKCFFEKSED-----------------KVACKAEISVDDIQSLVSDEIWQKYNKFKFNKEHELARQCPYCDHSQICAGSDHPECVCEACNREFCFVHSNAHQGRTCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDTVFPEHFQWWNVRGCAGNQM-ADIEGQGATQKGIGLVMRILFFVIFGPPAFVMAVVFSIMC--CFFLPC 505          
The following BLAST results are available for this feature:
BLAST of NO03G05090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29954.13.700e-14062.37ring-finger-containing e3 ubiquitin [Nannochlorops... [more]
XP_005853674.11.100e-13662.43ring-finger-containing e3 ubiquitin, partial [Nann... [more]
OQR96619.13.200e-6744.82RING-finger-containing E3 ubiquitin ligase, partia... [more]
XP_012212395.14.600e-6648.24hypothetical protein SPRG_17370 [Saprolegnia paras... [more]
XP_012206935.16.000e-6644.86hypothetical protein SPRG_11364 [Saprolegnia paras... [more]
OQR83287.18.600e-6547.52RING-finger-containing E3 ubiquitin ligase [Achlya... [more]
XP_008604055.11.100e-6445.91hypothetical protein SDRG_00360 [Saprolegnia dicli... [more]
XP_009519281.13.600e-6344.77hypothetical protein PHYSODRAFT_487639 [Phytophtho... [more]
ETI50061.11.800e-6243.97hypothetical protein F443_06310 [Phytophthora para... [more]
ETK89961.11.800e-6243.97hypothetical protein L915_06184 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005370NSK005370Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05090.1NO03G05090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667597gene_1717Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100247g8gene696Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05090.1NO03G05090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05090 ID=NO03G05090|Name=NO03G05090|organism=Nannochloropsis oceanica|type=gene|length=2736bp
ATGTTTGGGCGCCGCGCAGGCAACAGTAGTTTCAAGCCAAAGCCCCAGCC
TCTCCCAGCCCCCCCCATCACGGACGCCGACGAGGGCAACAAGACGGAGT
CTCACACCATCGACATCATTGCCAAGCCCCCCGAGATTGCGGACGCTGCT
CCTTCTTTCGCCCCCCCTTCTTCGAATACATCTGCTCAATTCAAACCACC
TTCCGCTTGCTCGTTTTCCTCTCCCTCGCTCGTAGCGCCCCATTCAATTG
CTGCTGCGGACACCCTGGCACGCCTCGAGGAGGGTCACGTACCTCCTTCC
TCCTCGTCGTTACCGTCCTATTCCTCGGTGGTTTCGGACCTTCCCACGCA
AGTATCGCATCTCTCGCCTTCACCTATCGAACAGGAGTCCTTGCGGGAAA
TGGGAAAGAGGGAGGCGGGAGAGGAAAAGGGGGAAGAGGAGGAGGCATCA
TCTGTGGTTCCTGATGTCTTGCCCATTCCCTTCCGGCAGTCTATGTCTGG
TGGTGCTGGTTCATCCGTAGGGAGCCCTGTCAATGCGAGCAGGAGCACGA
CTCCCACGCAATACCACCAACACCACCACCTCCACCGCCATGAACGACAT
TGTCGTCGCTCTTCGAGGGGCGATCCTTCCAACCGCGCTTCCGAGCGCGT
GAGTTGCCACACCAATCACCACTACCACCACCACCACCACCATGAGAACG
ACGAAAACGCAAGTTGCCATGGCTCTCACCCCCCCGGCGGCCCTGTTTCT
GACGACGGATGCACGCATGCATGTAGCCACACCGGCACCAATAGTGTCGA
TGGCAACAACAGCTACGGGAATTTAAGTGCCCTGGGAGAGATCACGCGGC
ATGTGTCCCAGTCGTTTCAACTAACGGTCGACATAGTCAAGACCCACTTG
GGGGAGGAGTTGGTGTTTTGTTCCATCTGTCGGGAGTATGAGGGGGTGAG
CAAGACGTTCCGGCTCTCGGGGTGTGGGCACCGGTTCTGTCGGTGTTGTT
TCGCCTCTTACCTGGAATGCAAGATTTGCGAAGGTCAAGTCAAGCCCACC
TGTTTCTTTAGCGAGGACCCGAGGGGGGGGGGGCGGGAGGTAGGGGGTAG
GCGGACACCGGTCATTATTCCTCCTCCCTGCGCGAAACGAGTTGAGGAAG
GGGATATCAAGGCGTTGGTCCGGGCGGAGACCTGGGCCAAGTATGAGCGG
TTTAAGTTTCAAAAAAAAAACCGAAATGGACGTATCTGCCCATGGTGTGA
GACGCCTGTCCTGGGAGACCCTGAAAAACCGGAGATGGAGTGTGGGAAGT
GCGGCCGCGGGTTTTGTTATTTTCACAGTAATGCCCATGTAGGGAGGAGT
TGCACGGAGTACGAGCAGCGGATGCATGAGGAGGAGCTGAAGAATCAGGC
AATGATTAGCAGTTTCGCCAAGgtaggtatatttgtatatatgtacgtat
gtatgtatatctatggagggcggtggtttgccgtgaggaagatggggatt
tgccgccgacaatctcacaggccaaccccccctccctcctcccctccctc
tccttccttttctcccctcccccagCCCTGCCCTGGATGCGGGAATCCCG
TCGAGAAAGCGGGTGGGTGCAACCAAATGTTCTGCGTGTGGTGCGGCGAG
CACTGGTGCTGGCTTTGCGGCAAGTTCGTGGACAAAGGAACCTTCCCCAA
TCATTTCCAGgtgagggggggggagggagggagggggggagggggggagt
ggaggacggggaggaaactccatcacatctaaaagttgcgtacgctattc
gtgacacggagacatgaacttaccctccctccatcttccctttctccctt
tctccctccctccctccctccctccctccctccccagTGGTGGAACGTCC
GCGGCTGCCCCAACATGCAGATGCAGGAAGACGTGGCACCTCCTTCTCCC
TCCCACATTCGCTGGATGAAGGTCGTCTCTTTCCTGCAGCTGGTGTTTGT
CGGCCCGGCAGgtgcgtgtgccaatagtaaagttcctgaaaatgaataag
tgtctcttttaagttgggagggggggttgtgtcctgccatccacatgctc
ccccctactccatttcctcaacgtttccctccctccctcctcccttttgc
ccctttaccactgtcaacagCCTTCGTCCTCGGTACTGTGTTTTATCTCC
TCTGCTTTCCTTGCTTTTTGTTCAAATGCATCGGACAAAGGGAAAGAGAA
GAGGAAGAGGGGGGAGAAGGGGAAGGGGAAAGGGAAGGAGGGAGGGATTC
AAGGGATGGGAGGGAAGACGGGGGGGAGGAAGGGGAGAGGGAACTACGGC
AGCAATACACCGGATGTGTCAGTTTTTGGGGAAACACGCTCCTAGGGCTC
TTGTTGATACCCTTTTTCTTGACTATCCTGCTCCTTTGTTTTGTGGTCAC
GTTCATCCAAGTTCTGGTGACGAGTATCAATACGAGGTTTGGAGTGTGTT
GTGGCGCGAAGGGTGGAAGAAGAGGGGGAGGTAGGGGGGAAGGAGGGGAG
GGACGGGTGGCGGCGACTGTTGTGGCGGGGTTGGGAAGTACGGCAGTGGC
TATGACGAGGAGTTTGAGTCGAGGGGGAGCAGGAGAAAGAGGGGAAGCAG
GGTTAGGAGCCGGAGCAGAAGGGGGAGCAGGGGCAGCAGCCGGAGCTGGA
GGAGGAGGAGGACGACGACGAGTAGGAGGCAGTTGA
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protein sequence of NO03G05090.1

>NO03G05090.1-protein ID=NO03G05090.1-protein|Name=NO03G05090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=749bp
MFGRRAGNSSFKPKPQPLPAPPITDADEGNKTESHTIDIIAKPPEIADAA
PSFAPPSSNTSAQFKPPSACSFSSPSLVAPHSIAAADTLARLEEGHVPPS
SSSLPSYSSVVSDLPTQVSHLSPSPIEQESLREMGKREAGEEKGEEEEAS
SVVPDVLPIPFRQSMSGGAGSSVGSPVNASRSTTPTQYHQHHHLHRHERH
CRRSSRGDPSNRASERVSCHTNHHYHHHHHHENDENASCHGSHPPGGPVS
DDGCTHACSHTGTNSVDGNNSYGNLSALGEITRHVSQSFQLTVDIVKTHL
GEELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPT
CFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYER
FKFQKKNRNGRICPWCETPVLGDPEKPEMECGKCGRGFCYFHSNAHVGRS
CTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEH
WCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVS
FLQLVFVGPAAFVLGTVFYLLCFPCFLFKCIGQREREEEEGGEGEGEREG
GRDSRDGREDGGEEGERELRQQYTGCVSFWGNTLLGLLLIPFFLTILLLC
FVVTFIQVLVTSINTRFGVCCGAKGGRRGGGRGEGGEGRVAATVVAGLGS
TAVAMTRSLSRGGAGERGEAGLGAGAEGGAGAAAGAGGGGGRRRVGGS*
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Synonyms
Publications