NO03G05090, NO03G05090 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G05090 vs. NCBI_GenBank
Match: EWM29954.1 (ring-finger-containing e3 ubiquitin [Nannochloropsis gaditana]) HSP 1 Score: 508.4 bits (1308), Expect = 3.700e-140 Identity = 237/380 (62.37%), Postives = 277/380 (72.89%), Query Frame = 0 Query: 273 GNLSALGEITRHVSQSFQLTVDIVKTHLGEELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCETPVLGDPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNV-RGCPNMQMQEDVAPPSPSHIRWMKVVSFLQLVFVGPAAFVLGTVFYLLCFPCFLFKCIG-------QREREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQYTGCVSFWGNTLLGLLLIPFFL 645 G+LS LG+I RHVSQSFQ+++DIVKTHLGEELVFC +CREYE VSKT+RL CGHR+CR CF SYLECKI EGQ+ PTCF+SE+ GRE GRR IP PCA V E D+ LV ETW KYERFKFQK +RN R+CP+C++ LGD E+P M C KCG+ FCYFH++AH +SCTEYEQ HEE L+NQAMIS+ AKPCPGCGNPVEK+GGCNQM CVWCG++WCWLCGK VD GTFP+HFQWWNV GCPNMQMQED+ PP PSHIR +K +S LQL+F+GPAAFV+GT Y+ CFPCFLFKC+G +RE E YTGC+SFWGNTL+ LLIPFF+ Sbjct: 179 GSLSTLGKIGRHVSQSFQMSLDIVKTHLGEELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGRE--GRRYRT-IPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENE--------------------------EGGRQLRAHYTGCISFWGNTLVAFLLIPFFV 529
BLAST of NO03G05090 vs. NCBI_GenBank
Match: XP_005853674.1 (ring-finger-containing e3 ubiquitin, partial [Nannochloropsis gaditana CCMP526] >EKU22688.1 ring-finger-containing e3 ubiquitin, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 496.9 bits (1278), Expect = 1.100e-136 Identity = 231/370 (62.43%), Postives = 269/370 (72.70%), Query Frame = 0 Query: 273 GNLSALGEITRHVSQSFQLTVDIVKTHLGEELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCETPVLGDPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNV-RGCPNMQMQEDVAPPSPSHIRWMKVVSFLQLVFVGPAAFVLGTVFYLLCFPCFLFKCIG-------QREREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQYTGCVSFWGNTL 635 G+LS LG+I RHVSQSFQ+++DIVKTHLGEELVFC +CREYE VSKT+RL CGHR+CR CF SYLECKI EGQ+ PTCF+SE+ GRE GRR IP PCA V E D+ LV ETW KYERFKFQK +RN R+CP+C++ LGD E+P M C KCG+ FCYFH++AH +SCTEYEQ HEE L+NQAMIS+ AKPCPGCGNPVEK+GGCNQM CVWCG++WCWLCGK VD GTFP+HFQWWNV GCPNMQMQED+ PP PSHIR +K +S LQL+F+GPAAFV+GT Y+ CFPCFLFKC+G +RE E YTGC+SFWGNTL Sbjct: 49 GSLSTLGKIGRHVSQSFQMSLDIVKTHLGEELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGRE--GRRYRT-IPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENE--------------------------EGGRQLRAHYTGCISFWGNTL 389
BLAST of NO03G05090 vs. NCBI_GenBank
Match: OQR96619.1 (RING-finger-containing E3 ubiquitin ligase, partial [Thraustotheca clavata]) HSP 1 Score: 266.2 bits (679), Expect = 3.200e-67 Identity = 147/328 (44.82%), Postives = 178/328 (54.27%), Query Frame = 0 Query: 259 SHTGTNS-VDGNNSYGNLSALGEITRHVSQSFQLTVDIVKTHLGEELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCETPVLG-DPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSF----LQLVFVGPAAFVLGTVFYLL---CFPCFL 578 S +GT S + GN +S I S S L + + +T +C IC EY VS T+ LS CGHRFC C +YLE KI +G + P CF+ G PC + DI+ LV + KYE+FKF K + + R CP+C +G P P MEC KC + FCY HSNAH SC EYE +M EE NQA IS +KPCPGC NPVEK GGCNQM C+ CG H+CWLCGK VD G FP HFQWWN+RGC QM E A PS K++SF L GP AFV+ F +L C PCF+ Sbjct: 416 SMSGTESAILGNEENNRMSMTNPIELIRSVSSILGMGMAET------TYCQICLEYVDVSSTYPLSACGHRFCVECINAYLESKINDGLIHPKCFYMPTATGDTE-----------AQPCQVLITSDDIQTLVSTSVYEKYEKFKFVKTHADARECPFCNFVQVGRGPNDPVMECIKCSKIFCYTHSNAHPTTSCIEYEVKMRAEEKINQAKISQISKPCPGCKNPVEKNGGCNQMKCIQCGCHFCWLCGKKVDGGVFPEHFQWWNLRGCAGAQMSE-TASEGPS--TCSKLLSFSWRILLCAIFGPPAFVMAVTFSILSCCCIPCFM 723
BLAST of NO03G05090 vs. NCBI_GenBank
Match: XP_012212395.1 (hypothetical protein SPRG_17370 [Saprolegnia parasitica CBS 223.65] >KDO16895.1 hypothetical protein SPRG_17370 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 262.3 bits (669), Expect = 4.600e-66 Identity = 137/284 (48.24%), Postives = 165/284 (58.10%), Query Frame = 0 Query: 303 ELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCETPVLGD-PEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSF-----LQLVFVGPAAFVLGTVFYLL---CFPCFL 578 E +C IC EY V+ T LS CGHRFC C YL KI +G V P CFF++ G GR PC + DI+ALV + + KYE+F F K + + R CP C +G+ P+ P M+C +CG FCY HSNAH +C EYE +M E+ NQA IS +KPCPGC +PVEK GGCNQM CV CG H+CWLCG+ VD G FP HFQWWN+RGC QM E A PS + K+VSF L LVF GP A L F +L C PC L Sbjct: 11 ETSYCQICLEYVDVASTVALSVCGHRFCADCIHGYLASKISDGLVAPKCFFAD---GDGR-------------PCEALIPPSDIQALVSTDVFEKYEKFNFIKAHADARECPHCHVLQVGNGPDDPHMDCTQCGEAFCYTHSNAHPHSTCLEYEAKMRAEDKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWNLRGCAGAQMSE-TAVEGPSTL--SKIVSFSWRLLLCLVF-GPPALALTLAFSVLGCCCIPCCL 274
BLAST of NO03G05090 vs. NCBI_GenBank
Match: XP_012206935.1 (hypothetical protein SPRG_11364 [Saprolegnia parasitica CBS 223.65] >KDO22412.1 hypothetical protein SPRG_11364 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 261.9 bits (668), Expect = 6.000e-66 Identity = 144/321 (44.86%), Postives = 176/321 (54.83%), Query Frame = 0 Query: 267 DGNNSYGNLSALGEITRHVSQSFQLTVDIVKTHLG---EELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCETPVLGD-PEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSF---LQLVFVGPAAFVLGTVFYLL---CFPCFL 578 + NN+ N+S G S + + T LG E +C IC EY V+ T LS CGHRFC C YL KI +G V P CFF++ G GR PC + DI+ALV + + KYE+F F K + R CP C +G+ P+ P M+C +CG FCY HSNAH +C EYE +M E+ NQA IS +KPCPGC +PVEK GGCNQM CV CG H+CWLCG+ VD G FP HFQWWN+RGC QM E A PS + M S+ L LVF GP A L F +L C PC L Sbjct: 12 NANNNSINMSMSGRALGDERNSLSF-LRSMSTMLGLGMAETSYCQICLEYVDVASTVALSVCGHRFCADCIHGYLASKISDGLVAPKCFFAD---GDGR-------------PCEALIPPSDIQALVSTDVFEKYEKFNFIKAHAGARECPHCHVLQVGNGPDDPHMDCTQCGEAFCYTHSNAHPHSTCLEYEAKMRAEDKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWNLRGCAGAQMSE-TAVEGPSTLSKMVAFSWRILLCLVF-GPPALALTLAFSILGCCCIPCCL 313
BLAST of NO03G05090 vs. NCBI_GenBank
Match: OQR83287.1 (RING-finger-containing E3 ubiquitin ligase [Achlya hypogyna]) HSP 1 Score: 258.1 bits (658), Expect = 8.600e-65 Identity = 134/282 (47.52%), Postives = 158/282 (56.03%), Query Frame = 0 Query: 303 ELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCETPVLG-DPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAP-PSPSHIRWMKVVSF----LQLVFVGPAAFVLGTVFYLL---CFPC 576 E +C IC EY V TF LS CGHRFC C YL KI +G V P CFF T PPC + DI+ALV + + KYE+FKF K + + R CP+C +G P+ P ++C C FCY HSNAH +C EYE +M EE NQA IS +KPCPGC +PVEK GGCNQM CV CG H+CWLCG+ VD G FP HFQWWN+RGC QM E A PS + KV SF L + GP A L VF +L C PC Sbjct: 140 ETSYCQICLEYVNVHTTFPLSACGHRFCVECLNGYLASKIKDGLVTPQCFF---------------TAADGAPPCGVAIATSDIQALVPVDLFDKYEKFKFIKTHADARECPYCHHVQVGRGPDDPVIDCAACHETFCYTHSNAHPTSTCLEYEAKMRAEEKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWNLRGCAGAQMSESAADGPSTA----AKVASFTWRILLCLIFGPPALALTLVFSVLSCCCIPC 402
BLAST of NO03G05090 vs. NCBI_GenBank
Match: XP_008604055.1 (hypothetical protein SDRG_00360 [Saprolegnia diclina VS20] >EQC42632.1 hypothetical protein SDRG_00360 [Saprolegnia diclina VS20]) HSP 1 Score: 257.7 bits (657), Expect = 1.100e-64 Identity = 129/281 (45.91%), Postives = 160/281 (56.94%), Query Frame = 0 Query: 303 ELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCETPVLGD-PEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSF--LQLVFVGPAAFVLGTVFYLL---CFPCFL 578 E +C IC EY ++ T LS CGHRFC C YL KI +G + P CFF++ G +IPP D++ALV E + KYE+FKF K + + R CP C +G+ P+ P M+C +CG FCY HSNAH +C YE +M E+ NQA IS +KPCPGC +PVEK GGCNQM CV CG H+CWLCG+ VD G FP HFQWWN+RGC QM E A PS + M S+ L + GP A L F +L C PC L Sbjct: 162 ETSYCQICLEYVDIASTVALSVCGHRFCADCIHGYLANKIADGLIAPKCFFADS--------DGHPCEAVIPP--------SDVQALVSTEVFEKYEKFKFIKAHADARECPHCHLLQVGNGPDDPHMDCMQCGESFCYTHSNAHPNSTCLAYEAKMRAEDKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWNLRGCAGAQMSE-TAVEGPSTVSKMLSFSWRILLCLLFGPPALALTLAFSILSCCCIPCCL 425
BLAST of NO03G05090 vs. NCBI_GenBank
Match: XP_009519281.1 (hypothetical protein PHYSODRAFT_487639 [Phytophthora sojae] >EGZ23993.1 hypothetical protein PHYSODRAFT_487639 [Phytophthora sojae]) HSP 1 Score: 252.7 bits (644), Expect = 3.600e-63 Identity = 124/277 (44.77%), Postives = 154/277 (55.60%), Query Frame = 0 Query: 302 EELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCE-TPVLGDPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSFLQLVFVGPAAFVLGTVFYLLCFPCFL 578 EE C IC +Y VS ++ L+GCGH FC C +YLE KI EGQV P CFF C + DI++LV E W KY +FKF K++ R CP+C+ + + + PE C C R FC+ HSNAH GR+C EY+++M E N A+IS +KPCPGC N VEK GGCNQM CV C +CW+C K +D FP HFQWWNVRGC QM D+ + V+ L V GP AFVL VF +LC CFL Sbjct: 201 EETFLCQICYDYAPVSTSYALTGCGHTFCEACLKNYLEFKIKEGQVYPKCFFENSDDKAA---------------CKADIVVDDIQSLVSDEVWQKYNKFKFNKEHELARQCPYCDHSQICAGSDHPECVCEACSREFCFVHSNAHQGRTCAEYDKQMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDSVFPEHFQWWNVRGCAGNQM-ADIEGQGTTQKGIGMVMRILFFVLFGPPAFVLAVVFCILCC-CFL 460
BLAST of NO03G05090 vs. NCBI_GenBank
Match: ETI50061.1 (hypothetical protein F443_06310 [Phytophthora parasitica P1569] >ETL43359.1 hypothetical protein L916_06122 [Phytophthora parasitica] >ETP19832.1 hypothetical protein F441_06317 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 250.4 bits (638), Expect = 1.800e-62 Identity = 124/282 (43.97%), Postives = 156/282 (55.32%), Query Frame = 0 Query: 302 EELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFF--SEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCE-TPVLGDPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSFLQLVFVGPAAFVLGTVFYLLCFPCFLFKC 581 EE C IC +Y V+ ++ LS CGH FC C +YLE KI EGQV P CFF SED C + DI++LV E W KY +FKF K++ R CP+C+ + + + PE C C R FC+ HSNAH GR+C EY+++M E N A+IS +KPCPGC N VEK GGCNQM CV C +CW+C K +D FP HFQWWNVRGC QM D+ + V+ L V GP AFV+ VF ++C CF C Sbjct: 244 EETFLCQICYDYASVNTSYGLSVCGHTFCEACLRNYLEFKIKEGQVYPKCFFEKSED-----------------KVACKAEISVDDIQSLVSDEIWQKYNKFKFNKEHELARQCPYCDHSQICAGSDHPECVCEACNREFCFVHSNAHQGRTCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDTVFPEHFQWWNVRGCAGNQM-ADIEGQGATQKGIGLVMRILFFVIFGPPAFVMAVVFSIMC--CFFLPC 505
BLAST of NO03G05090 vs. NCBI_GenBank
Match: ETK89961.1 (hypothetical protein L915_06184 [Phytophthora parasitica]) HSP 1 Score: 250.4 bits (638), Expect = 1.800e-62 Identity = 124/282 (43.97%), Postives = 156/282 (55.32%), Query Frame = 0 Query: 302 EELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFF--SEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCE-TPVLGDPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSFLQLVFVGPAAFVLGTVFYLLCFPCFLFKC 581 EE C IC +Y V+ ++ LS CGH FC C +YLE KI EGQV P CFF SED C + DI++LV E W KY +FKF K++ R CP+C+ + + + PE C C R FC+ HSNAH GR+C EY+++M E N A+IS +KPCPGC N VEK GGCNQM CV C +CW+C K +D FP HFQWWNVRGC QM D+ + V+ L V GP AFV+ VF ++C CF C Sbjct: 244 EETFLCQICYDYASVNTSYGLSVCGHTFCEACLRNYLEFKIKEGQVYPKCFFEKSED-----------------KVACKAEISVDDIQSLVSDEIWQKYNKFKFNKEHELARQCPYCDHSQICAGSDHPECVCEACNREFCFVHSNAHQGRTCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDTVFPEHFQWWNVRGCAGNQM-ADIEGQGATQKGIGLVMRILFFVIFGPPAFVMAVVFSIMC--CFFLPC 505 The following BLAST results are available for this feature:
BLAST of NO03G05090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G05090 ID=NO03G05090|Name=NO03G05090|organism=Nannochloropsis oceanica|type=gene|length=2736bpback to top protein sequence of NO03G05090.1 >NO03G05090.1-protein ID=NO03G05090.1-protein|Name=NO03G05090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=749bpback to top Synonyms
Publications
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