NO03G05050, NO03G05050 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G05050 vs. NCBI_GenBank
Match: KZV46591.1 (desumoylating isopeptidase 1, partial [Dorcoceras hygrometricum]) HSP 1 Score: 97.8 bits (242), Expect = 5.200e-17 Identity = 55/140 (39.29%), Postives = 78/140 (55.71%), Query Frame = 0 Query: 68 LRVYDIG-GKYTPMMSALLRKEMPAIWHVGVGVYGKEYWFSTRIESKDLGDTETAFGMVPHATYDLGHTLVEREAFEAYLEEELDARFNIDTYKVFTHNCNHFSRDALAFLMGGNVEMPSYILENSDKALDALPQGQAML 207 L VYD+ G + + L K + IWH G+ VYG EY+F I+ G T +G P DLG T V +E FE YL E+D R+ +TY++ THNCN+FS + FL+G ++ P YIL ++ + + P G ML Sbjct: 10 LHVYDLSQGLARQLSTTFLGKVIEGIWHTGIVVYGNEYYFGGGIQHAPAG--TTPYG-TPLKVVDLGVTHVPKEVFETYL-REIDNRYTAETYRLLTHNCNNFSNEVAQFLVGASI--PEYILNLPNEVMSS-PMGALML 142
BLAST of NO03G05050 vs. NCBI_GenBank
Match: XP_016696308.1 (PREDICTED: deSI-like protein At4g17486 [Gossypium hirsutum]) HSP 1 Score: 97.8 bits (242), Expect = 5.200e-17 Identity = 58/146 (39.73%), Postives = 81/146 (55.48%), Query Frame = 0 Query: 68 LRVYDIG-GKYTPMMSALLRKEMPAIWHVGVGVYGKEYWFSTRIESKDLGDTETAFGMVPHATYDLGHTLVEREAFEAYLEEELDARFNIDTYKVFTHNCNHFSRDALAFLMGGNVEMPSYILENSDKALDALPQGQAMLTKTIAN 213 L VYD+ G + LL K + IWH GV VYG EY+F I+ G T +G P DLG T V ++ FE YL +E+ R+ +TY + THNCN+FS + FL+G N+ P YIL+ ++ + + P G A+L I N Sbjct: 10 LNVYDLSQGLARQLSMTLLGKPIEGIWHTGVVVYGNEYYFGGGIQHSPAG--TTPYG-TPIRVIDLGVTHVPKDVFEMYL-QEISPRYTAETYSLLTHNCNNFSNEVAQFLVGSNI--PDYILQLPNEVMSS-PMG-ALLMPMIQN 147
BLAST of NO03G05050 vs. NCBI_GenBank
Match: XP_016710535.1 (PREDICTED: deSI-like protein At4g17486 [Gossypium hirsutum] >XP_016710536.1 PREDICTED: deSI-like protein At4g17486 [Gossypium hirsutum]) HSP 1 Score: 97.8 bits (242), Expect = 5.200e-17 Identity = 58/146 (39.73%), Postives = 81/146 (55.48%), Query Frame = 0 Query: 68 LRVYDIG-GKYTPMMSALLRKEMPAIWHVGVGVYGKEYWFSTRIESKDLGDTETAFGMVPHATYDLGHTLVEREAFEAYLEEELDARFNIDTYKVFTHNCNHFSRDALAFLMGGNVEMPSYILENSDKALDALPQGQAMLTKTIAN 213 L VYD+ G + LL K + IWH GV VYG EY+F I+ G T +G P DLG T V ++ FE YL +E+ R+ +TY + THNCN+FS + FL+G N+ P YIL+ ++ + + P G A+L I N Sbjct: 10 LNVYDLSQGLARQLSMTLLGKPIEGIWHTGVVVYGNEYYFGGGIQHSPAG--TTPYG-TPIRVIDLGVTHVPKDVFEMYL-QEISPRYTAETYSLLTHNCNNFSNEVAQFLVGSNI--PDYILQLPNEVMSS-PMG-ALLMPMIQN 147
BLAST of NO03G05050 vs. NCBI_GenBank
Match: OAY64608.1 (Desumoylating isopeptidase 1 [Ananas comosus]) HSP 1 Score: 97.8 bits (242), Expect = 5.200e-17 Identity = 56/140 (40.00%), Postives = 79/140 (56.43%), Query Frame = 0 Query: 68 LRVYDIG-GKYTPMMSALLRKEMPAIWHVGVGVYGKEYWFSTRIESKDLGDTETAFGMVPHATYDLGHTLVEREAFEAYLEEELDARFNIDTYKVFTHNCNHFSRDALAFLMGGNVEMPSYILENSDKALDALPQGQAML 207 L VYD+ G + + L K + AIWH GV VYG EY+F I+ G T +G P DLG T V +E FE YL +E+ R+ +TY + +HNCN+FS + FL+G ++ PSYILE +++ P G +L Sbjct: 16 LNVYDLSQGLARQLSTTFLGKAIEAIWHTGVVVYGTEYYFGAGIQQDPAG--RTPYG-TPVRVVDLGVTHVPKEVFEDYL-QEISGRYTPETYNLLSHNCNNFSNEVAQFLVGASI--PSYILELPSDVMNS-PMGALIL 148
BLAST of NO03G05050 vs. NCBI_GenBank
Match: XP_020094687.1 (desumoylating isopeptidase 1-like [Ananas comosus]) HSP 1 Score: 97.8 bits (242), Expect = 5.200e-17 Identity = 56/140 (40.00%), Postives = 79/140 (56.43%), Query Frame = 0 Query: 68 LRVYDIG-GKYTPMMSALLRKEMPAIWHVGVGVYGKEYWFSTRIESKDLGDTETAFGMVPHATYDLGHTLVEREAFEAYLEEELDARFNIDTYKVFTHNCNHFSRDALAFLMGGNVEMPSYILENSDKALDALPQGQAML 207 L VYD+ G + + L K + AIWH GV VYG EY+F I+ G T +G P DLG T V +E FE YL +E+ R+ +TY + +HNCN+FS + FL+G ++ PSYILE +++ P G +L Sbjct: 10 LNVYDLSQGLARQLSTTFLGKAIEAIWHTGVVVYGTEYYFGAGIQQDPAG--RTPYG-TPVRVVDLGVTHVPKEVFEDYL-QEISGRYTPETYNLLSHNCNNFSNEVAQFLVGASI--PSYILELPSDVMNS-PMGALIL 142
BLAST of NO03G05050 vs. NCBI_GenBank
Match: PPD70316.1 (hypothetical protein GOBAR_DD32809 [Gossypium barbadense] >PPR80571.1 hypothetical protein GOBAR_AA40141 [Gossypium barbadense]) HSP 1 Score: 97.8 bits (242), Expect = 5.200e-17 Identity = 58/146 (39.73%), Postives = 81/146 (55.48%), Query Frame = 0 Query: 68 LRVYDIG-GKYTPMMSALLRKEMPAIWHVGVGVYGKEYWFSTRIESKDLGDTETAFGMVPHATYDLGHTLVEREAFEAYLEEELDARFNIDTYKVFTHNCNHFSRDALAFLMGGNVEMPSYILENSDKALDALPQGQAMLTKTIAN 213 L VYD+ G + LL K + IWH GV VYG EY+F I+ G T +G P DLG T V ++ FE YL +E+ R+ +TY + THNCN+FS + FL+G N+ P YIL+ ++ + + P G A+L I N Sbjct: 10 LNVYDLSQGLARQLSMTLLGKPIEGIWHTGVVVYGNEYYFGGGIQHSPAG--TTPYG-TPIRVIDLGVTHVPKDVFEMYL-QEISPRYTAETYSLLTHNCNNFSNEVAQFLVGSNI--PDYILQLPNEVMSS-PMG-ALLMPMIQN 147
BLAST of NO03G05050 vs. NCBI_GenBank
Match: XP_002454765.1 (desumoylating isopeptidase 1 [Sorghum bicolor] >EES07741.1 hypothetical protein SORBI_3004G341800 [Sorghum bicolor]) HSP 1 Score: 97.4 bits (241), Expect = 6.900e-17 Identity = 52/123 (42.28%), Postives = 72/123 (58.54%), Query Frame = 0 Query: 68 LRVYDI-GGKYTPMMSALLRKEMPAIWHVGVGVYGKEYWFSTRIESKDLGDTETAFGMVPHATYDLGHTLVEREAFEAYLEEELDARFNIDTYKVFTHNCNHFSRDALAFLMGGNVEMPSYIL 190 L VYD+ G + ++ L K + AIWH GV VYG EY+F I+S G T +G P T +LG T + RE FE YL ++ R+ +TY++ THNCN+FS + FL+G +P YIL Sbjct: 10 LNVYDLSNGLARQLSTSFLGKPIEAIWHTGVVVYGNEYYFGGGIQSSPAG--TTPYGR-PLRTVELGVTHIPREVFEDYL-RDIAPRYTAETYRLLTHNCNNFSHEVAQFLVGTGAGVPDYIL 128
BLAST of NO03G05050 vs. NCBI_GenBank
Match: XP_020699113.1 (desumoylating isopeptidase 1 [Dendrobium catenatum] >PKU72242.1 DeSI-like protein [Dendrobium catenatum]) HSP 1 Score: 97.4 bits (241), Expect = 6.900e-17 Identity = 62/184 (33.70%), Postives = 94/184 (51.09%), Query Frame = 0 Query: 68 LRVYDIG-GKYTPMMSALLRKEMPAIWHVGVGVYGKEYWFSTRIESKDLGDTETAFGMVPHATYDLGHTLVEREAFEAYLEEELDARFNIDTYKVFTHNCNHFSRDALAFLMGGNVEMPSYILE------NSDKALDALPQGQAMLTKTIANQVARVVMLAWGNANRSKEEIARREARRKTKKI 245 L +YD+ G + A L K + AIWH G+ VYG EY+F I+ +G T +G VP + +LG T V +E FE YL +E+ +R+ +TY++ +HNCN+FS + FL+G ++ P YIL+ NS A LP Q + T + V + N + + R A K + Sbjct: 10 LNIYDLSQGLARQLSVAFLGKSIEAIWHTGIVVYGNEYYFGAGIQHDPVG--RTPYG-VPLRSVELGVTHVPKEIFEDYL-KEISSRYTAETYRLLSHNCNNFSNEVAQFLVGTSI--PDYILQLPNDVMNSPMAPLILPMIQQLETTMRSGAVPQAPQFVSPNLKAQQSPVVRATASNPVKPV 187
BLAST of NO03G05050 vs. NCBI_GenBank
Match: XP_021763447.1 (desumoylating isopeptidase 1-like [Chenopodium quinoa]) HSP 1 Score: 97.4 bits (241), Expect = 6.900e-17 Identity = 54/140 (38.57%), Postives = 82/140 (58.57%), Query Frame = 0 Query: 68 LRVYDIG-GKYTPMMSALLRKEMPAIWHVGVGVYGKEYWFSTRIESKDLGDTETAFGMVPHATYDLGHTLVEREAFEAYLEEELDARFNIDTYKVFTHNCNHFSRDALAFLMGGNVEMPSYILENSDKALDALPQGQAML 207 L VYD+ G + + L K + AIWH G+ VYGKEY+F I+ G T+ +G P DLG T + ++ FE+YLEE D R+ +TY + +HNCN+FS + FL+G ++ P YIL+ ++ + + P G +L Sbjct: 10 LHVYDLSQGLARQLSTTFLGKAIEAIWHTGIVVYGKEYFFGGGIQHAPAGSTQ--YG-TPMKVVDLGITYLPQDVFESYLEEISD-RYTAETYSLLSHNCNNFSNEVAQFLVGTSI--PDYILQLPNEVMSS-PMGAMIL 142
BLAST of NO03G05050 vs. NCBI_GenBank
Match: PPR91758.1 (hypothetical protein GOBAR_AA28917 [Gossypium barbadense]) HSP 1 Score: 97.4 bits (241), Expect = 6.900e-17 Identity = 57/142 (40.14%), Postives = 80/142 (56.34%), Query Frame = 0 Query: 68 LRVYDIG-GKYTPMMSALLRKEMPAIWHVGVGVYGKEYWFSTRIESKDLGDTETAFGMVPHATYDLGHTLVEREAFEAYLEEELDARFNIDTYKVFTHNCNHFSRDALAFLMGGNVEMPSYILENSDKALDALPQGQAMLTK 209 L VYD+ G + LL K + IWH GV VYG EY+F I+ G T +G P DLG T V ++ FE YL +E+ R+ +TY + THNCN+FS + FL+G N+ P YIL+ ++ + + P G A+L K Sbjct: 10 LNVYDLSQGLARQLSMTLLGKPIEGIWHTGVVVYGNEYYFGGGIQHSPAG--TTPYG-TPIRVIDLGVTHVPKDVFEMYL-QEISPRYTAETYSLLTHNCNNFSNEVAQFLVGSNI--PDYILQLPNEVMSS-PMG-ALLVK 143 The following BLAST results are available for this feature:
BLAST of NO03G05050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G05050 ID=NO03G05050|Name=NO03G05050|organism=Nannochloropsis oceanica|type=gene|length=792bpback to top protein sequence of NO03G05050.1 >NO03G05050.1-protein ID=NO03G05050.1-protein|Name=NO03G05050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=264bpback to top Synonyms
Publications
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