NO03G05050, NO03G05050 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G05050 vs. NCBI_GenBank
Match: EWM29939.1 (protein of unknown function DUF862, eukaryotic [Nannochloropsis gaditana]) HSP 1 Score: 333.6 bits (854), Expect = 5.700e-88 Identity = 176/261 (67.43%), Postives = 196/261 (75.10%), Query Frame = 0 Query: 6 SSLLFFILLSPIAAFLPPSPGPLASSRPSLPVFSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLRVYDIGGKYTPMMSALLRKEMPAIWHVGVGVYGKEYWFSTRIESKDLGDTETAFGMVPHATYDLGHTLVEREAFEAYLEEELDARFNIDTYKVFTHNCNHFSRDALAFLMGGNVEMPSYILENSDKALDALPQGQAMLTKTIANQVARVVMLAWGNANRSKEEIARREARRKTKKIE---VDEAQANGPGKEGGQQMA 264 SS + I+ PIAAFLPP P ++ P+ S+ LRVYDIGGKYTPMMSALLRKEMPAIWHVG+GV+GKEYWFSTRIESKDLGDTETAFGM PHATY+LG T VER+AFEA+LEEEL +RFNIDTYKVFTHNCNHFSRDALAFL+G VEMP YILENSD+ALDALP+GQA+LTK+IANQVARVVMLAWG ANRSKE+IARREARRK E V+EA+ G E G Q A Sbjct: 11 SSFVLLIINKPIAAFLPPIPFSATATSPT----SARVTLSSSSALQDDSFPEQGAFQHNKVELRVYDIGGKYTPMMSALLRKEMPAIWHVGIGVFGKEYWFSTRIESKDLGDTETAFGMAPHATYELGQTAVERKAFEAFLEEELSSRFNIDTYKVFTHNCNHFSRDALAFLLGEGVEMPGYILENSDRALDALPKGQALLTKSIANQVARVVMLAWGTANRSKEDIARREARRKKAMAERDSVEEAEEGRRGVEEGSQPA 267
BLAST of NO03G05050 vs. NCBI_GenBank
Match: XP_005855163.1 (hypothetical protein NGA_2079000, partial [Nannochloropsis gaditana CCMP526] >EKU21197.1 hypothetical protein NGA_2079000, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 330.1 bits (845), Expect = 6.300e-87 Identity = 169/245 (68.98%), Postives = 188/245 (76.73%), Query Frame = 0 Query: 6 SSLLFFILLSPIAAFLPPSPGPLASSRPSLPVFSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLRVYDIGGKYTPMMSALLRKEMPAIWHVGVGVYGKEYWFSTRIESKDLGDTETAFGMVPHATYDLGHTLVEREAFEAYLEEELDARFNIDTYKVFTHNCNHFSRDALAFLMGGNVEMPSYILENSDKALDALPQGQAMLTKTIANQVARVVMLAWGNANRSKEEIARREARRKTKKIEVDEAQ 251 SS + I+ PIAAFLPP P ++ P+ S+ LRVYDIGGKYTPMMSALLRKEMPAIWHVG+GV+GKEYWFSTRIESKDLGDTETAFGM PHATY+LG T VER+AFEA+LEEEL +RFNIDTYKVFTHNCNHFSRDALAFL+G VEMP YILENSD+ALDALP+GQA+LTK+IANQVARVVMLAWG ANRSKE+IARREARRK E D + Sbjct: 15 SSFVLLIINKPIAAFLPPIPFSATATSPT----SARVTLSSSSALQDDSFPEQGAFQHNKVELRVYDIGGKYTPMMSALLRKEMPAIWHVGIGVFGKEYWFSTRIESKDLGDTETAFGMAPHATYELGQTAVERKAFEAFLEEELSSRFNIDTYKVFTHNCNHFSRDALAFLLGEGVEMPGYILENSDRALDALPKGQALLTKSIANQVARVVMLAWGTANRSKEDIARREARRKKAMAERDSVE 255
BLAST of NO03G05050 vs. NCBI_GenBank
Match: CEL99225.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 162.5 bits (410), Expect = 1.700e-36 Identity = 77/154 (50.00%), Postives = 105/154 (68.18%), Query Frame = 0 Query: 84 LLRKEMPAIWHVGVGVYGKEYWFSTRIESKDLGDTETAFGMVPHATYDLGHTLVEREAFEAYLEEELDARFNIDTYKVFTHNCNHFSRDALAFLMGGNVE---MPSYILENSDKALDALPQGQAMLTKTIANQVARVVMLAWGNANRSKEEIAR 235 L+RK + IWH G+ VYG+EYWFST IESKD+ TE+AFGM P +D+G T +++ FE YLE EL RF++D Y+ FT+NCNH +AL FL + E +P YILE S+ LD + QA LT+ IA +V+R++M+ W +NR+KEE R Sbjct: 2 LVRKNIETIWHAGLVVYGREYWFSTHIESKDIQHTESAFGMAPTHVHDMGATTIDQRVFEDYLERELAPRFSLDRYETFTNNCNHMIDEALTFLTAPSAEPQRLPYYILEQSETILDNVSDLQADLTRKIATRVSRLIMVGWAKSNRAKEERER 155
BLAST of NO03G05050 vs. NCBI_GenBank
Match: XP_005792379.1 (hypothetical protein EMIHUDRAFT_417423 [Emiliania huxleyi CCMP1516] >EOD39950.1 hypothetical protein EMIHUDRAFT_417423 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 104.0 bits (258), Expect = 7.300e-19 Identity = 57/139 (41.01%), Postives = 82/139 (58.99%), Query Frame = 0 Query: 68 LRVYDI-GGKYTPMMSALLRKEMPAIWHVGVGVYGKEYWFSTRIESKDLGDTETAFGMVPHATYDLGHTLVEREAFEAYLEEELDARFNIDTYKVFTHNCNHFSRDALAFLMGGNVEMPSYILENSDKALDALPQGQAM 206 L VYD+ GG M ALL ++ I H GVGV+G+EY+FS ++ + LG G+ H T +LG T + RE F+ Y +E ARF+ D Y + +NCNHFS + FL+G V +P +IL+ +A+ A P GQ + Sbjct: 261 LYVYDLSGGAARGMAQALLGIDVEIIPHTGVGVFGREYYFSGGVQREPLGAFTAHSGLPVHQTLELGRTSLPREVFDEYCDEVGAARFSADAYSLLENNCNHFSNECAQFLLG--VGIPQHILD-LPRAVLASPMGQML 396
BLAST of NO03G05050 vs. NCBI_GenBank
Match: EJK67640.1 (hypothetical protein THAOC_11301 [Thalassiosira oceanica]) HSP 1 Score: 103.2 bits (256), Expect = 1.200e-18 Identity = 60/192 (31.25%), Postives = 99/192 (51.56%), Query Frame = 0 Query: 70 VYDIGGKYTPMMSALLRKEMPAIWHVGVGVYGKEYWFSTRIESKDLGDTETAFGMVPHATYDLGHTLVEREAFEAYLEEELDARFNIDTYKVFTHNCNHFSRDALAFLMGGNVEMP--SYILENSDKALDALPQGQAMLTKTIANQVARVVMLAWGNANRSKEEIARREARRKTKKIEVDEAQANGPGKEGG 260 +Y+IGG T ++S ++ K+M + HVGV VYG E+++S RIE + + + +P T+DLG + +E E ++E D + +TY VF NCN+F + + G + P +E K LD LP + + ++ R+++ +WG A R K+EI R +D A+A+ K GG Sbjct: 99 IYEIGGPVTEVLSFMVNKKMALVPHVGVRVYGMEWFYSNRIEHEPVEVMDKMLEGMPSVTFDLGRATLSKEEVEEWIESVND-EWVAETYDVFNRNCNNFGILMASEISEGGIPEPYGQATIETMTKLLDNLPNWRKEMGLHFMTKITRLIVSSWGRATRDKKEITAR---------NLDLAKADADTKTGG 280
BLAST of NO03G05050 vs. NCBI_GenBank
Match: XP_005761597.1 (hypothetical protein EMIHUDRAFT_471030 [Emiliania huxleyi CCMP1516] >XP_005763995.1 hypothetical protein EMIHUDRAFT_465005 [Emiliania huxleyi CCMP1516] >EOD09168.1 hypothetical protein EMIHUDRAFT_471030 [Emiliania huxleyi CCMP1516] >EOD11566.1 hypothetical protein EMIHUDRAFT_465005 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 102.4 bits (254), Expect = 2.100e-18 Identity = 56/163 (34.36%), Postives = 94/163 (57.67%), Query Frame = 0 Query: 71 YDIGGKYTPMMSALLRKEMPAIWHVGVGVYGKEYWFSTRIESKDLGDTETAFGMVPHATYDLGHTLVEREAFEAYLEEELDARFNIDTYKVFTHNCNHFSRDALAFLMGGNVEMP--SYILENSDKALDALPQGQAMLTKTIANQVARVVMLAWGNANRSKEE 232 Y+IGG T ++S + K++P I HVG+ V+G EY++S IE + + T DLG +L+ ++ E L L+A ++ D Y VF NC HFS A + G + P +L+ S++ LD+LP+ + L + + N+V R+V+++WG A++ K+E Sbjct: 121 YEIGGPLTSVLSTSVAKQLPMIPHVGIRVHGVEYFYSDHIECRTV-------------TIDLGPSLLGKDEVEG-LVGSLEATWDADAYHVFDKNCVHFSDALAARVSEGGLPQPLVQGVLDVSERMLDSLPEWRRALGRRVMNEVTRLVVVSWGKASKEKKE 269
BLAST of NO03G05050 vs. NCBI_GenBank
Match: ONK79587.1 (uncharacterized protein A4U43_C01F7890 [Asparagus officinalis]) HSP 1 Score: 99.4 bits (246), Expect = 1.800e-17 Identity = 56/140 (40.00%), Postives = 83/140 (59.29%), Query Frame = 0 Query: 68 LRVYDIG-GKYTPMMSALLRKEMPAIWHVGVGVYGKEYWFSTRIESKDLGDTETAFGMVPHATYDLGHTLVEREAFEAYLEEELDARFNIDTYKVFTHNCNHFSRDALAFLMGGNVEMPSYILENSDKALDALPQGQAML 207 L +YD+ G ++LL K + AIWH GV VYG EY+F I+ G T +G P DLG T V +E FE YL +E+ +R+ +TYK+ +HNCN+FS + FL+G ++ P YIL+ ++ L++ P G +L Sbjct: 138 LNMYDLSQGLARQFSTSLLGKAIEAIWHTGVVVYGNEYYFGGGIQHNPAG--RTPYG-TPMRVIDLGVTHVPKEVFEEYL-QEISSRYTAETYKLLSHNCNNFSNEVAHFLVGTSI--PEYILQLPNEVLNS-PMGALIL 270
BLAST of NO03G05050 vs. NCBI_GenBank
Match: XP_020276939.1 (desumoylating isopeptidase 1 [Asparagus officinalis]) HSP 1 Score: 99.4 bits (246), Expect = 1.800e-17 Identity = 56/140 (40.00%), Postives = 83/140 (59.29%), Query Frame = 0 Query: 68 LRVYDIG-GKYTPMMSALLRKEMPAIWHVGVGVYGKEYWFSTRIESKDLGDTETAFGMVPHATYDLGHTLVEREAFEAYLEEELDARFNIDTYKVFTHNCNHFSRDALAFLMGGNVEMPSYILENSDKALDALPQGQAML 207 L +YD+ G ++LL K + AIWH GV VYG EY+F I+ G T +G P DLG T V +E FE YL +E+ +R+ +TYK+ +HNCN+FS + FL+G ++ P YIL+ ++ L++ P G +L Sbjct: 16 LNMYDLSQGLARQFSTSLLGKAIEAIWHTGVVVYGNEYYFGGGIQHNPAG--RTPYG-TPMRVIDLGVTHVPKEVFEEYL-QEISSRYTAETYKLLSHNCNNFSNEVAHFLVGTSI--PEYILQLPNEVLNS-PMGALIL 148
BLAST of NO03G05050 vs. NCBI_GenBank
Match: XP_012830256.1 (PREDICTED: desumoylating isopeptidase 1 [Erythranthe guttata] >EYU46335.1 hypothetical protein MIMGU_mgv1a012018mg [Erythranthe guttata] >EYU46336.1 hypothetical protein MIMGU_mgv1a012018mg [Erythranthe guttata]) HSP 1 Score: 99.0 bits (245), Expect = 2.400e-17 Identity = 56/140 (40.00%), Postives = 81/140 (57.86%), Query Frame = 0 Query: 68 LRVYDIG-GKYTPMMSALLRKEMPAIWHVGVGVYGKEYWFSTRIESKDLGDTETAFGMVPHATYDLGHTLVEREAFEAYLEEELDARFNIDTYKVFTHNCNHFSRDALAFLMGGNVEMPSYILENSDKALDALPQGQAML 207 L VYD+ G + + L K + AIWH GV VYG EY+F I+S +G T +G P DLG T V ++ FE YL +E+ R+ +TY + THNCN+FS + FL+G ++ P YIL ++ +++ P G ML Sbjct: 10 LNVYDLSQGLARQLSTTFLGKAIEAIWHTGVVVYGHEYYFGGGIQSAPVG--TTPYG-TPLRVVDLGLTHVPKDVFEMYL-QEIGPRYTAETYSLMTHNCNNFSNEVAQFLVGASI--PDYILNLPNEVMNS-PMGPLML 142
BLAST of NO03G05050 vs. NCBI_GenBank
Match: XP_011083128.1 (desumoylating isopeptidase 1 [Sesamum indicum]) HSP 1 Score: 99.0 bits (245), Expect = 2.400e-17 Identity = 57/140 (40.71%), Postives = 79/140 (56.43%), Query Frame = 0 Query: 68 LRVYDIG-GKYTPMMSALLRKEMPAIWHVGVGVYGKEYWFSTRIESKDLGDTETAFGMVPHATYDLGHTLVEREAFEAYLEEELDARFNIDTYKVFTHNCNHFSRDALAFLMGGNVEMPSYILENSDKALDALPQGQAML 207 L VYD+ G + + L K + IWH G+ VYG EY+F I+S +G T +G P DLG T V ++ FE YL +E+ RF +TY + THNCN+FS + FL+G V +P YIL ++ L + P G ML Sbjct: 10 LNVYDLSQGLARQLSTTFLGKAIEGIWHTGIVVYGNEYYFGGGIQSAPVG--TTPYG-TPIRVVDLGVTHVPKDVFEMYL-QEIGPRFTAETYSLLTHNCNNFSNEVAQFLVGAPV-VPEYILNLPNEVLSS-PMGALML 143 The following BLAST results are available for this feature:
BLAST of NO03G05050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G05050 ID=NO03G05050|Name=NO03G05050|organism=Nannochloropsis oceanica|type=gene|length=792bpback to top protein sequence of NO03G05050.1 >NO03G05050.1-protein ID=NO03G05050.1-protein|Name=NO03G05050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=264bpback to top Synonyms
Publications
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