NO03G05040, NO03G05040 (gene) Nannochloropsis oceanica

Overview
NameNO03G05040
Unique NameNO03G05040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1386
Alignment locationchr3:1429425..1430810 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1429425..1430810 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO03G05040 vs. NCBI_GenBank
Match: EWM29942.1 (hypothetical protein Naga_100510g3 [Nannochloropsis gaditana])

HSP 1 Score: 518.5 bits (1334), Expect = 2.000e-143
Identity = 275/410 (67.07%), Postives = 307/410 (74.88%), Query Frame = 0
Query:   20 VAEAFHVRLPLPVLRPGIAAAVTYS-------HSHXXXXXXXXXXXXXXXXXYNDQNGSGSSSRSKEGTVMDEAQLGEVEEEADLDGTGATLVMPSATTGPTSAAAPAVFQLWKRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGWVPLAIMWTGVINCISCLPMSKFRTGTSGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELEEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVVVLTPFVTTVVDVGTLGREVSINPFE 423
            V +AFHVRL      P +A     S        SH                  +D   SG S       V++E + GE + E +      T V+ ++   P +  A A+FQLWKRRLWTKADYLHSHAVSG AFMVLGALYVL+F+GD++F G+ LA AE GVVGWVPLAIMWTGV+NCISCLPMSKFR G  GGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYP+WMAPVDP+LA+GFLAVI+HGIVNSEVALAKELEEKAPAM+PEGVW S+PS                    ERETRTEI+LNHRVASYPNLLHLPVLYN+ILGGQ WLQQ++ KFPLEPTLLFHASFGIAVANSIVFLGATLKDR+LMTLRQWLLLQVVV+TPFVTTVVDV +LGREVSINP E
Sbjct:   18 VLQAFHVRLVPKHALPALARRSPVSSLIFGPPSSHGLHHSRIRSSGFAMYNSPDDGTSSGQS------VVVEEVEKGETDLELN-----DTAVLTASVGSPATETANAMFQLWKRRLWTKADYLHSHAVSGAAFMVLGALYVLFFVGDQVFGGSALAQAERGVVGWVPLAIMWTGVVNCISCLPMSKFRAGPQGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPSWMAPVDPLLALGFLAVIVHGIVNSEVALAKELEEKAPAMSPEGVWSSTPSSPASSPDAS---------LTERETRTEIVLNHRVASYPNLLHLPVLYNVILGGQPWLQQVVAKFPLEPTLLFHASFGIAVANSIVFLGATLKDRKLMTLRQWLLLQVVVMTPFVTTVVDVWSLGREVSINPLE 407          
BLAST of NO03G05040 vs. NCBI_GenBank
Match: CEM15061.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 262.7 bits (670), Expect = 2.000e-66
Identity = 150/349 (42.98%), Postives = 200/349 (57.31%), Query Frame = 0
Query:   84 DEAQLGEVEEEADLDGTGATLVMPSATTGPTSAAAPAVFQLWKRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGW----VPLAIMWTGVINCISCLPMSKFRTGTSGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELEEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVVVLTPFVTTVVDVGTLGREVSINPFEVYAGLI 429
            DE   G  + +A + G      +P         A  A ++  ++R+WT  D+LH HAVSG  FM LG L+  + L   +    G     + ++ W      + ++   ++NC +C+PMSKFR     G+DTKG GFKGLG GMT+L  W A + SG+YP  +    P +A  FLA I+HGI  SE AL   +         +  W    S                      E R +I+LNHRVASYPNLLHLP+L+NI +GG+ WL  +L  FP E  LL+ A+FG+A+ANSIVFLGATLKDRRLMTLR+WL LQ+VVL PFV+TVVD    G  +S+ P+EVYAGL+
Sbjct:  106 DEIMTGGADVDARVGGASDVRRIPRVNAAKVFTA--AYWRECRKRMWTSMDWLHLHAVSGVLFMGLGTLWFGWELARPVLGVEGAFEMPSPLLPWRADSASMTLLMVAILNCFTCIPMSKFR----NGHDTKGDGFKGLGTGMTLLAAWEALWVSGYYPPVLEAATPAIATAFLATIVHGIWTSEKALEGAVHRL------DAKWARGSSNRETSLSYD-------------EMRNDIVLNHRVASYPNLLHLPILWNIGIGGRGWLDTVLQSFPGESALLYDAAFGMALANSIVFLGATLKDRRLMTLREWLALQLVVLAPFVSTVVDCCVYGDSISVKPWEVYAGLV 429          
BLAST of NO03G05040 vs. NCBI_GenBank
Match: CEM02202.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 219.9 bits (559), Expect = 1.500e-53
Identity = 127/308 (41.23%), Postives = 182/308 (59.09%), Query Frame = 0
Query:  126 KRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGW----VPLAIMWTGVINCISCLPMSKFRTGTSGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELEEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVVVLTPFVTTVVDVGTLGRE-VSINPFEVYAGLI 429
            KRRLWT+ D+LH HA+SG A++ LG L+ L+ +         L    +    W    + +A++  GV+NC+SC PMSK  +        K  GF+GLG+GMT+LG+W A + SG YP  +      +   FL +I+ GI  +E AL  +L   +       +   +P                       E R E ++ HR+ASYPNLLH P+L+N+++GG++WL ++L  FP E  LL+HA+FG+A+AN+IVFLGATL+ R+LMT RQW+ LQ+VVL PF +TVVD    G E VS+NP ++YAG I
Sbjct:  138 KRRLWTRMDWLHIHAISGVAYIGLGGLWFLWEMVGPSLGLQQLVPPPSPYDLWQADALSVALLLVGVLNCVSCAPMSKHMS------PAKSEGFEGLGVGMTLLGVWEALWVSGFYPPSLEWATDGIGAVFLFMILRGIYTAERALESDLAMISAKYALGRI--RTPGAF-------------------AEARLESMVIHRIASYPNLLHTPILWNMLVGGREWLDRVLDTFPAESILLYHAAFGMALANAIVFLGATLQHRKLMTSRQWIALQLVVLAPFWSTVVDCLVYGPETVSVNPLDMYAGFI 418          
BLAST of NO03G05040 vs. NCBI_GenBank
Match: XP_005759533.1 (hypothetical protein EMIHUDRAFT_432986 [Emiliania huxleyi CCMP1516] >EOD07104.1 hypothetical protein EMIHUDRAFT_432986 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 139.4 bits (350), Expect = 2.600e-29
Identity = 98/312 (31.41%), Postives = 157/312 (50.32%), Query Frame = 0
Query:  126 KRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGWVPLA--------IMWTGVINCISCLPMSKFRTGTS-GGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELE--EKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVVVLT-PFVTTVVDVGTLGREVSINPFEVYA 426
            +RRLWT+AD++H HAVSG  F+ LG  +++Y            +H  N +   VP+A        ++  G++N +S +PMSKF +       D K  GF   G G+T + ++ A++FSG YP ++ P D  + + +  V      N EV L +  +  E+     P                             E+E R + IL +R+AS+PNL  L  +Y+I  GG  WLQQ   ++P++ T ++H     A+  ++     TL+DR+L+TL Q LL+ +V  T P V+ ++D  T G  V+I+P E +A
Sbjct:  157 RRRLWTRADFMHIHAVSGAYFLFLGIPWLVY------------SHVTNALDTSVPMATSGPFLTSLLVAGLVNALSAVPMSKFNSNKMLDMRDLKANGFTFGGTGLTTMCLYIAWWFSGDYPDFLRPFDIPIFLFWALVCAGTTANWEVMLQQNFQANERRRVKVP-----------------------------EKEMRQKAIL-YRLASWPNLTQLSFMYSIPFGGAAWLQQCTAQWPMQSTPMYHYGIASAMGYALSMFSETLRDRKLVTLEQDLLVLIVGFTFPMVSVLLDGLTYGSAVTISPPEYWA 426          
BLAST of NO03G05040 vs. NCBI_GenBank
Match: EJK67640.1 (hypothetical protein THAOC_11301 [Thalassiosira oceanica])

HSP 1 Score: 131.7 bits (330), Expect = 5.300e-27
Identity = 101/363 (27.82%), Postives = 168/363 (46.28%), Query Frame = 0
Query:   69 NGSGSSSRSKEGTVMDEAQLGEVEEEADLDGTGATLVMPSATTGPTSAAAPAVFQLWKRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGWVPLAIMWTGVINCISCLPMSKFRTGTSGGY-DTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELEEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVV-VLTPFVTTVVDVGTLGREVSINPFE---VYAG 427
            N  G S   K   +     L +VE++AD     A L + S  T              +RRLWTKAD++H HA++GT F+ LG  ++LY        G        G  G    +++ TG+ N +S +PMS+F +     + D K  GF   G G+T + +W A++FSG YP  + P++      + A+ +    N E  L +  E            K +                       ++   +  L +R+AS+PNL  L  + +I LGG++W+  +   +P++   ++H     A+  ++  L  TL+DR+L+ L+  L+L +   L P V+ VVD  T G  ++INP +   ++AG
Sbjct:  313 NSFGPSMIGKGAQLPSVRDLKKVEDKADSPFAEALLAIDSTGT-------------IRRRLWTKADFMHIHAITGTYFLALGMAWLLY----SHVVGFQNPEQMMGTTGPFLASLLLTGLGNALSAIPMSRFSSDKMFDFEDLKANGFTIGGTGLTCMSLWVAWWFSGSYPDALEPLNTAFFFLWAAICVGSTANWEYMLQQNFENSTGKARRGKFGKQT-----------------------QDEMNKKALLYRIASWPNLTQLMFISSIPLGGREWVGSMTDTWPMQMIPMYHYGLVSAIGYALSMLAETLRDRKLIDLQTDLMLLIFGFLIPIVSVVVDSVTYGDAITINPLDYWVIFAG 635          
BLAST of NO03G05040 vs. NCBI_GenBank
Match: XP_005783002.1 (hypothetical protein EMIHUDRAFT_442486 [Emiliania huxleyi CCMP1516] >EOD30573.1 hypothetical protein EMIHUDRAFT_442486 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 131.0 bits (328), Expect = 9.100e-27
Identity = 98/323 (30.34%), Postives = 157/323 (48.61%), Query Frame = 0
Query:  126 KRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGWVPLA--------IMWTGVINCISCLPMSKFRTGTS-GGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELE--EKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGG-----------QDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVVVLT-PFVTTVVDVGTLGREVSINPFEVYA 426
            +RRLWT+AD++H HAVSG  F+ LG  +++Y            +H  N +   VP+A        ++  G++N +S +PMSKF +       D K  GF   G G+T + ++ A++FSG YP ++ P D  + + +  V      N EV L +  +  E+     P                             E+E R + IL +R+AS+PNL  L  +Y+I  GG             WLQQ   ++P++ T ++H     A+  ++     TL+DR+L+TL Q LL+ +V  T P V+ ++D  T G  V+I+P E +A
Sbjct:  157 RRRLWTRADFMHIHAVSGAYFLFLGIPWLVY------------SHVTNALDTSVPMATSGPFLTSLLVAGLVNALSAVPMSKFNSNKMLDMRDLKANGFTFGGTGLTTMCLYIAWWFSGDYPDFLRPFDIPIFLFWALVCAGTTANWEVMLQQNFQANERRRVKVP-----------------------------EKEMRQKAIL-YRLASWPNLTQLSFMYSIPFGGAASLGQGPVLRAAWLQQCTAQWPMQSTPMYHYGIASAMGYALSMFSETLRDRKLVTLEQDLLVLIVGFTFPMVSVLLDGLTYGSAVTISPPEYWA 437          
BLAST of NO03G05040 vs. NCBI_GenBank
Match: CBJ25962.1 (expressed unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 127.5 bits (319), Expect = 1.000e-25
Identity = 94/350 (26.86%), Postives = 160/350 (45.71%), Query Frame = 0
Query:   80 GTVMDEAQLGEVEEEADLDGTGATLVMPSATTGPTSAAAPAVFQLWKRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGWVPLAIMWTGVINCISCLPMSKFRTGTSGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELEEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLL-HLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVVVLTPFVTTVVDVGTLGREVSINPFEVYAGLI 429
            G V  E      EE   L  T     +P       +A  P    + +RR+ TK D++H HA SG  ++  G+LY+L  +G ELF G      +      +PL ++  G +N  S +PM+  R+                G+ ++ + +W A++ SG YPA +AP DP LA   L++++   V +E  +  E  ++   +  +G  ++                    + +  +   E    +R  SY +L+ + P LY  ++ G  W+++L   FP  P LLFHA   +A + SI FL  TL  RRL+  +    +Q +   P V +++D   +G   + NP ++Y G +
Sbjct:  136 GAVAQEEVRQAGEEVVRLTATTVARALPGTW---LTAGLPKWMHILRRRMITKEDWMHLHASSGALYIAGGSLYLLGVIGMELFTGT----PQLDTTSALPLCVLGFGALNTFSSIPMANTRSWVLS------------GLCLSTMQLWNAWYVSGAYPASLAPADPWLAAANLSLLVIACVEAEEQILAEKRQR-EILAQKGRRRTG------------------KIHIRGDDHVEGDAMNRAGSYGSLIFNAPHLYATLV-GSGWVERLGEAFPDSPALLFHAYVALATSTSIAFLAPTLYQRRLIDAKMMSSMQFLTFAPAVMSLIDASVMGAAATNNPIDIYLGFL 446          
BLAST of NO03G05040 vs. NCBI_GenBank
Match: XP_009036969.1 (hypothetical protein AURANDRAFT_64248 [Aureococcus anophagefferens] >EGB08238.1 hypothetical protein AURANDRAFT_64248 [Aureococcus anophagefferens])

HSP 1 Score: 127.1 bits (318), Expect = 1.300e-25
Identity = 110/336 (32.74%), Postives = 157/336 (46.73%), Query Frame = 0
Query:   99 GTGATLVMPSATTGPTSAAAPAVFQLW-KRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAE-NGVVGWVPLAIMWTGVINCISCLPM-SKFRTGTSGGYDTKGA-GFKGLGIGMTMLGIWTAYFFSGHYPAWM-APVDPVLAIGFLAVIIHGIVNSEVALAKELEEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWL-LLQVVVLTPFVTTVVDVGTLGREVSINPFEVYAGLI 429
            GT   L +P     P +A  P V   + KR+LWTK D+ HSHAVSG AF+ LG  ++      E  AGA  A A  +G  G   LAI+  GV N +S LPM S  R   +   D   A  F+  G    +   W  ++FSG YPA++   VD  L +  +A I   I  SE ++A    + A      G   S                      +      ++    R+ SYPNL  LPVL N++LGG+ WL ++L +FP +  LL H  F  A++ +I F   TL+DR ++ +   L +L      PF+T  VDV       ++NP +   G +
Sbjct:  146 GTFLELEVPDLAPAPPAAPRPRVTAAYLKRKLWTKLDFAHSHAVSGAAFLALGVGWLGAVARGEA-AGAVEAGARIHG--GPASLAILAVGVWNSVSALPMASDERVYVTRDLDRYHALAFRWGGSAQLVACAWLCWWFSGLYPAFVPGVVDGALCLAAMASIAWVIYFSEESIAVVDRKVAEGGFVHGKRASE---------------------LTAGEHAQLSALARLGSYPNLFQLPVLANVLLGGRPWLDRVLDEFPHQSALLHHYLFACALSYAITFFATTLRDRNVIGITADLAMLATGTALPFLTMFVDVAAFPAATTLNPLDYNVGFL 457          
BLAST of NO03G05040 vs. NCBI_GenBank
Match: XP_009038043.1 (hypothetical protein AURANDRAFT_64930 [Aureococcus anophagefferens] >EGB07426.1 hypothetical protein AURANDRAFT_64930 [Aureococcus anophagefferens])

HSP 1 Score: 125.9 bits (315), Expect = 2.900e-25
Identity = 104/336 (30.95%), Postives = 162/336 (48.21%), Query Frame = 0
Query:   96 DLDGTGATLVMPSATTGPTSAAAPAVF-QLWKRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGWVPLAIMWTGVINCISCLPMSKFRTGTSGGY-DTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKEL---EEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIIL-GGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVV-VLTPFVTTVVDVGTLGREVSINPFEVY 425
            ++D   AT+       G    A  AVF    +RRLWTKAD++H+HA SG  F+V   L++LY       AG   A A     G +  +++  GV N ++ +PM++F +       D K  GF   G G+T++ IW A +FSG YPA + P  P   + + +V     +N E+ L +     EE    M   G  K+                     A   E   + IL +R+AS+PNL  L  LY++ L     W   ++ ++P +  L +H  F  AV  ++     TL+DR+L++LR  L++ VV V  P V+  +D   LG  V++NP + +
Sbjct:   93 EMDLAKATVDASEGLAGLGGDAIAAVFGDTVRRRLWTKADFMHAHAASGAYFLVGAPLWLLY--SHATAAGHLDAVATWRFDGPLETSLLVAGVANALTAIPMARFSSNKMFDVTDLKANGFTFGGAGLTLMSIWIAAWFSGGYPAALLPAGPAFFLLWASVCAGTTLNWEIMLQQNFEAAEEANKEMATRGGRKTD-------------LERKFKTATPEELNEKAIL-YRLASWPNLTQLLFLYSLCLPDAAMWWAGVVERYPNQGVLGYHYGFASAVGYALSMFSETLRDRKLVSLRVDLIILVVGVFLPMVSVGLDGVLLGDTVTVNPLDYW 412          
The following BLAST results are available for this feature:
BLAST of NO03G05040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 9
Match NameE-valueIdentityDescription
EWM29942.12.000e-14367.07hypothetical protein Naga_100510g3 [Nannochloropsi... [more]
CEM15061.12.000e-6642.98unnamed protein product [Vitrella brassicaformis C... [more]
CEM02202.11.500e-5341.23unnamed protein product [Vitrella brassicaformis C... [more]
XP_005759533.12.600e-2931.41hypothetical protein EMIHUDRAFT_432986 [Emiliania ... [more]
EJK67640.15.300e-2727.82hypothetical protein THAOC_11301 [Thalassiosira oc... [more]
XP_005783002.19.100e-2730.34hypothetical protein EMIHUDRAFT_442486 [Emiliania ... [more]
CBJ25962.11.000e-2526.86expressed unknown protein [Ectocarpus siliculosus][more]
XP_009036969.11.300e-2532.74hypothetical protein AURANDRAFT_64248 [Aureococcus... [more]
XP_009038043.12.900e-2530.95hypothetical protein AURANDRAFT_64930 [Aureococcus... [more]
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005377NSK005377Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05040.1NO03G05040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573185gene_1711Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100510g3gene702Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05040.1NO03G05040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05040 ID=NO03G05040|Name=NO03G05040|organism=Nannochloropsis oceanica|type=gene|length=1386bp
ACTACAGGGCACGCAATGAAGGCTTCACCACCCCTTTTTACCTCAACCCT
AGCCGCGCTGGCCCTGCTCGCGGTCGCCGAGGCTTTCCACGTCCGCCTCC
CTCTTCCAGTTCTGAGACCAGGAATAGCAGCCGCCGTCACATACTCCCAT
TCCCATCCCAGCTCCAGCTCTGGCCTGATCTTTATGCGAAGAAGAAGGAC
CGTTCTCTACAATGATCAGAATGGTAGCGGCAGCAGCAGCCGCAGCAAGG
AAGGCACTGTGATGGATGAGGCGCAGCTGGGAGAGGTAGAGGAAGAGGCC
GACCTAGACGGCACCGGGGCGACGCTTGTCATGCCCTCCGCCACTACCGG
ACCCACCTCGGCCGCAGCTCCTGCCGTGTTCCAGCTCTGGAAGCGACGGT
TGTGGACCAAGGCGGATTATCTCCATTCGCACGCCGTGTCGGGCACAGCG
TTCATGGTGCTTGGGGCGCTCTATGTCCTATATTTCCTTGGGGACGAGCT
TTTTGCCGGGGCGGGCTTGGCGCACGCTGAGAACGGGGTGGTAGGATGGG
TTCCTCTGGCCATTATGTGGACAGGTGTGATCAACTGCATAAGTTGCTTG
CCCATGTCCAAGTTTCGGACAGGGACCAGTGGCGGGTACGACACGAAGGG
GGCGGGTTTTAAGGGGTTGGGGATTGGAATGACCATGCTGGGGATATGGA
CGGCTTATTTCTTCTCGGGACACTACCCTGCGTGGATGGCACCAGTTGAT
CCAGTCCTGGCAATCGGGTTCTTGGCGGTGATTATCCATGGCATCGTGAA
CTCGGAGGTGGCTTTAGCGAAAGAGCTGGAAGAGAAGGCGCCGGCCATGA
CCCCTGAGGGAGTGTGGAAGTCCTCCCCCTCTTCCTCTGACGAGACCGAC
CCAACCGCAGCAGCTGCAGCGACCCAACAGCAGCTGGCCGTCGAAAGAGA
GACACGCACGGAGATCATTCTCAATCACCGCGTGGCTTCCTACCCTAATC
TGCTGCACCTTCCCGTCCTCTACAACATTATTCTCGGAGGCCAAGACTGG
CTGCAGCAGCTCCTCCTCAAGTTTCCCCTCGAGCCCACCCTCCTCTTTCA
TGCCTCCTTCGGGATTGCTGTAGCGAACAGCATTGTATTTTTGGGTGCCA
CCTTGAAGGATCGACGATTGATGACCTTACGGCAATGGCTGTTGTTGCAG
GTGGTGGTGTTGACTCCGTTCGTCACCACAGTGGTGGATGTGGGAACGTT
GGGAAGAGAGGTGAGCATTAATCCGTTTGAGGTGTATGCGGGCTTGATCG
GCTGAGGGGGGACTGAAGCGGAGGAGGGGGGCATTATGCAGGGGCGGACG
CGATGGTCTTCGGGATTGCTGGAGGGAGGGCAGAAA
back to top

protein sequence of NO03G05040.1

>NO03G05040.1-protein ID=NO03G05040.1-protein|Name=NO03G05040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=430bp
MKASPPLFTSTLAALALLAVAEAFHVRLPLPVLRPGIAAAVTYSHSHPSS
SSGLIFMRRRRTVLYNDQNGSGSSSRSKEGTVMDEAQLGEVEEEADLDGT
GATLVMPSATTGPTSAAAPAVFQLWKRRLWTKADYLHSHAVSGTAFMVLG
ALYVLYFLGDELFAGAGLAHAENGVVGWVPLAIMWTGVINCISCLPMSKF
RTGTSGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAI
GFLAVIIHGIVNSEVALAKELEEKAPAMTPEGVWKSSPSSSDETDPTAAA
AATQQQLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGGQDWLQQLL
LKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVVVLT
PFVTTVVDVGTLGREVSINPFEVYAGLIG*
back to top
Synonyms
Publications