NO03G05040, NO03G05040 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G05040 vs. NCBI_GenBank
Match: EWM29942.1 (hypothetical protein Naga_100510g3 [Nannochloropsis gaditana]) HSP 1 Score: 518.5 bits (1334), Expect = 2.000e-143 Identity = 275/410 (67.07%), Postives = 307/410 (74.88%), Query Frame = 0 Query: 20 VAEAFHVRLPLPVLRPGIAAAVTYS-------HSHXXXXXXXXXXXXXXXXXYNDQNGSGSSSRSKEGTVMDEAQLGEVEEEADLDGTGATLVMPSATTGPTSAAAPAVFQLWKRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGWVPLAIMWTGVINCISCLPMSKFRTGTSGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELEEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVVVLTPFVTTVVDVGTLGREVSINPFE 423 V +AFHVRL P +A S SH +D SG S V++E + GE + E + T V+ ++ P + A A+FQLWKRRLWTKADYLHSHAVSG AFMVLGALYVL+F+GD++F G+ LA AE GVVGWVPLAIMWTGV+NCISCLPMSKFR G GGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYP+WMAPVDP+LA+GFLAVI+HGIVNSEVALAKELEEKAPAM+PEGVW S+PS ERETRTEI+LNHRVASYPNLLHLPVLYN+ILGGQ WLQQ++ KFPLEPTLLFHASFGIAVANSIVFLGATLKDR+LMTLRQWLLLQVVV+TPFVTTVVDV +LGREVSINP E Sbjct: 18 VLQAFHVRLVPKHALPALARRSPVSSLIFGPPSSHGLHHSRIRSSGFAMYNSPDDGTSSGQS------VVVEEVEKGETDLELN-----DTAVLTASVGSPATETANAMFQLWKRRLWTKADYLHSHAVSGAAFMVLGALYVLFFVGDQVFGGSALAQAERGVVGWVPLAIMWTGVVNCISCLPMSKFRAGPQGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPSWMAPVDPLLALGFLAVIVHGIVNSEVALAKELEEKAPAMSPEGVWSSTPSSPASSPDAS---------LTERETRTEIVLNHRVASYPNLLHLPVLYNVILGGQPWLQQVVAKFPLEPTLLFHASFGIAVANSIVFLGATLKDRKLMTLRQWLLLQVVVMTPFVTTVVDVWSLGREVSINPLE 407
BLAST of NO03G05040 vs. NCBI_GenBank
Match: CEM15061.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 262.7 bits (670), Expect = 2.000e-66 Identity = 150/349 (42.98%), Postives = 200/349 (57.31%), Query Frame = 0 Query: 84 DEAQLGEVEEEADLDGTGATLVMPSATTGPTSAAAPAVFQLWKRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGW----VPLAIMWTGVINCISCLPMSKFRTGTSGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELEEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVVVLTPFVTTVVDVGTLGREVSINPFEVYAGLI 429 DE G + +A + G +P A A ++ ++R+WT D+LH HAVSG FM LG L+ + L + G + ++ W + ++ ++NC +C+PMSKFR G+DTKG GFKGLG GMT+L W A + SG+YP + P +A FLA I+HGI SE AL + + W S E R +I+LNHRVASYPNLLHLP+L+NI +GG+ WL +L FP E LL+ A+FG+A+ANSIVFLGATLKDRRLMTLR+WL LQ+VVL PFV+TVVD G +S+ P+EVYAGL+ Sbjct: 106 DEIMTGGADVDARVGGASDVRRIPRVNAAKVFTA--AYWRECRKRMWTSMDWLHLHAVSGVLFMGLGTLWFGWELARPVLGVEGAFEMPSPLLPWRADSASMTLLMVAILNCFTCIPMSKFR----NGHDTKGDGFKGLGTGMTLLAAWEALWVSGYYPPVLEAATPAIATAFLATIVHGIWTSEKALEGAVHRL------DAKWARGSSNRETSLSYD-------------EMRNDIVLNHRVASYPNLLHLPILWNIGIGGRGWLDTVLQSFPGESALLYDAAFGMALANSIVFLGATLKDRRLMTLREWLALQLVVLAPFVSTVVDCCVYGDSISVKPWEVYAGLV 429
BLAST of NO03G05040 vs. NCBI_GenBank
Match: CEM02202.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 219.9 bits (559), Expect = 1.500e-53 Identity = 127/308 (41.23%), Postives = 182/308 (59.09%), Query Frame = 0 Query: 126 KRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGW----VPLAIMWTGVINCISCLPMSKFRTGTSGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELEEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVVVLTPFVTTVVDVGTLGRE-VSINPFEVYAGLI 429 KRRLWT+ D+LH HA+SG A++ LG L+ L+ + L + W + +A++ GV+NC+SC PMSK + K GF+GLG+GMT+LG+W A + SG YP + + FL +I+ GI +E AL +L + + +P E R E ++ HR+ASYPNLLH P+L+N+++GG++WL ++L FP E LL+HA+FG+A+AN+IVFLGATL+ R+LMT RQW+ LQ+VVL PF +TVVD G E VS+NP ++YAG I Sbjct: 138 KRRLWTRMDWLHIHAISGVAYIGLGGLWFLWEMVGPSLGLQQLVPPPSPYDLWQADALSVALLLVGVLNCVSCAPMSKHMS------PAKSEGFEGLGVGMTLLGVWEALWVSGFYPPSLEWATDGIGAVFLFMILRGIYTAERALESDLAMISAKYALGRI--RTPGAF-------------------AEARLESMVIHRIASYPNLLHTPILWNMLVGGREWLDRVLDTFPAESILLYHAAFGMALANAIVFLGATLQHRKLMTSRQWIALQLVVLAPFWSTVVDCLVYGPETVSVNPLDMYAGFI 418
BLAST of NO03G05040 vs. NCBI_GenBank
Match: XP_005759533.1 (hypothetical protein EMIHUDRAFT_432986 [Emiliania huxleyi CCMP1516] >EOD07104.1 hypothetical protein EMIHUDRAFT_432986 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 139.4 bits (350), Expect = 2.600e-29 Identity = 98/312 (31.41%), Postives = 157/312 (50.32%), Query Frame = 0 Query: 126 KRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGWVPLA--------IMWTGVINCISCLPMSKFRTGTS-GGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELE--EKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVVVLT-PFVTTVVDVGTLGREVSINPFEVYA 426 +RRLWT+AD++H HAVSG F+ LG +++Y +H N + VP+A ++ G++N +S +PMSKF + D K GF G G+T + ++ A++FSG YP ++ P D + + + V N EV L + + E+ P E+E R + IL +R+AS+PNL L +Y+I GG WLQQ ++P++ T ++H A+ ++ TL+DR+L+TL Q LL+ +V T P V+ ++D T G V+I+P E +A Sbjct: 157 RRRLWTRADFMHIHAVSGAYFLFLGIPWLVY------------SHVTNALDTSVPMATSGPFLTSLLVAGLVNALSAVPMSKFNSNKMLDMRDLKANGFTFGGTGLTTMCLYIAWWFSGDYPDFLRPFDIPIFLFWALVCAGTTANWEVMLQQNFQANERRRVKVP-----------------------------EKEMRQKAIL-YRLASWPNLTQLSFMYSIPFGGAAWLQQCTAQWPMQSTPMYHYGIASAMGYALSMFSETLRDRKLVTLEQDLLVLIVGFTFPMVSVLLDGLTYGSAVTISPPEYWA 426
BLAST of NO03G05040 vs. NCBI_GenBank
Match: EJK67640.1 (hypothetical protein THAOC_11301 [Thalassiosira oceanica]) HSP 1 Score: 131.7 bits (330), Expect = 5.300e-27 Identity = 101/363 (27.82%), Postives = 168/363 (46.28%), Query Frame = 0 Query: 69 NGSGSSSRSKEGTVMDEAQLGEVEEEADLDGTGATLVMPSATTGPTSAAAPAVFQLWKRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGWVPLAIMWTGVINCISCLPMSKFRTGTSGGY-DTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELEEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVV-VLTPFVTTVVDVGTLGREVSINPFE---VYAG 427 N G S K + L +VE++AD A L + S T +RRLWTKAD++H HA++GT F+ LG ++LY G G G +++ TG+ N +S +PMS+F + + D K GF G G+T + +W A++FSG YP + P++ + A+ + N E L + E K + ++ + L +R+AS+PNL L + +I LGG++W+ + +P++ ++H A+ ++ L TL+DR+L+ L+ L+L + L P V+ VVD T G ++INP + ++AG Sbjct: 313 NSFGPSMIGKGAQLPSVRDLKKVEDKADSPFAEALLAIDSTGT-------------IRRRLWTKADFMHIHAITGTYFLALGMAWLLY----SHVVGFQNPEQMMGTTGPFLASLLLTGLGNALSAIPMSRFSSDKMFDFEDLKANGFTIGGTGLTCMSLWVAWWFSGSYPDALEPLNTAFFFLWAAICVGSTANWEYMLQQNFENSTGKARRGKFGKQT-----------------------QDEMNKKALLYRIASWPNLTQLMFISSIPLGGREWVGSMTDTWPMQMIPMYHYGLVSAIGYALSMLAETLRDRKLIDLQTDLMLLIFGFLIPIVSVVVDSVTYGDAITINPLDYWVIFAG 635
BLAST of NO03G05040 vs. NCBI_GenBank
Match: XP_005783002.1 (hypothetical protein EMIHUDRAFT_442486 [Emiliania huxleyi CCMP1516] >EOD30573.1 hypothetical protein EMIHUDRAFT_442486 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 131.0 bits (328), Expect = 9.100e-27 Identity = 98/323 (30.34%), Postives = 157/323 (48.61%), Query Frame = 0 Query: 126 KRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGWVPLA--------IMWTGVINCISCLPMSKFRTGTS-GGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELE--EKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGG-----------QDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVVVLT-PFVTTVVDVGTLGREVSINPFEVYA 426 +RRLWT+AD++H HAVSG F+ LG +++Y +H N + VP+A ++ G++N +S +PMSKF + D K GF G G+T + ++ A++FSG YP ++ P D + + + V N EV L + + E+ P E+E R + IL +R+AS+PNL L +Y+I GG WLQQ ++P++ T ++H A+ ++ TL+DR+L+TL Q LL+ +V T P V+ ++D T G V+I+P E +A Sbjct: 157 RRRLWTRADFMHIHAVSGAYFLFLGIPWLVY------------SHVTNALDTSVPMATSGPFLTSLLVAGLVNALSAVPMSKFNSNKMLDMRDLKANGFTFGGTGLTTMCLYIAWWFSGDYPDFLRPFDIPIFLFWALVCAGTTANWEVMLQQNFQANERRRVKVP-----------------------------EKEMRQKAIL-YRLASWPNLTQLSFMYSIPFGGAASLGQGPVLRAAWLQQCTAQWPMQSTPMYHYGIASAMGYALSMFSETLRDRKLVTLEQDLLVLIVGFTFPMVSVLLDGLTYGSAVTISPPEYWA 437
BLAST of NO03G05040 vs. NCBI_GenBank
Match: CBJ25962.1 (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 127.5 bits (319), Expect = 1.000e-25 Identity = 94/350 (26.86%), Postives = 160/350 (45.71%), Query Frame = 0 Query: 80 GTVMDEAQLGEVEEEADLDGTGATLVMPSATTGPTSAAAPAVFQLWKRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGWVPLAIMWTGVINCISCLPMSKFRTGTSGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELEEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLL-HLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVVVLTPFVTTVVDVGTLGREVSINPFEVYAGLI 429 G V E EE L T +P +A P + +RR+ TK D++H HA SG ++ G+LY+L +G ELF G + +PL ++ G +N S +PM+ R+ G+ ++ + +W A++ SG YPA +AP DP LA L++++ V +E + E ++ + +G ++ + + + E +R SY +L+ + P LY ++ G W+++L FP P LLFHA +A + SI FL TL RRL+ + +Q + P V +++D +G + NP ++Y G + Sbjct: 136 GAVAQEEVRQAGEEVVRLTATTVARALPGTW---LTAGLPKWMHILRRRMITKEDWMHLHASSGALYIAGGSLYLLGVIGMELFTGT----PQLDTTSALPLCVLGFGALNTFSSIPMANTRSWVLS------------GLCLSTMQLWNAWYVSGAYPASLAPADPWLAAANLSLLVIACVEAEEQILAEKRQR-EILAQKGRRRTG------------------KIHIRGDDHVEGDAMNRAGSYGSLIFNAPHLYATLV-GSGWVERLGEAFPDSPALLFHAYVALATSTSIAFLAPTLYQRRLIDAKMMSSMQFLTFAPAVMSLIDASVMGAAATNNPIDIYLGFL 446
BLAST of NO03G05040 vs. NCBI_GenBank
Match: XP_009036969.1 (hypothetical protein AURANDRAFT_64248 [Aureococcus anophagefferens] >EGB08238.1 hypothetical protein AURANDRAFT_64248 [Aureococcus anophagefferens]) HSP 1 Score: 127.1 bits (318), Expect = 1.300e-25 Identity = 110/336 (32.74%), Postives = 157/336 (46.73%), Query Frame = 0 Query: 99 GTGATLVMPSATTGPTSAAAPAVFQLW-KRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAE-NGVVGWVPLAIMWTGVINCISCLPM-SKFRTGTSGGYDTKGA-GFKGLGIGMTMLGIWTAYFFSGHYPAWM-APVDPVLAIGFLAVIIHGIVNSEVALAKELEEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWL-LLQVVVLTPFVTTVVDVGTLGREVSINPFEVYAGLI 429 GT L +P P +A P V + KR+LWTK D+ HSHAVSG AF+ LG ++ E AGA A A +G G LAI+ GV N +S LPM S R + D A F+ G + W ++FSG YPA++ VD L + +A I I SE ++A + A G S + ++ R+ SYPNL LPVL N++LGG+ WL ++L +FP + LL H F A++ +I F TL+DR ++ + L +L PF+T VDV ++NP + G + Sbjct: 146 GTFLELEVPDLAPAPPAAPRPRVTAAYLKRKLWTKLDFAHSHAVSGAAFLALGVGWLGAVARGEA-AGAVEAGARIHG--GPASLAILAVGVWNSVSALPMASDERVYVTRDLDRYHALAFRWGGSAQLVACAWLCWWFSGLYPAFVPGVVDGALCLAAMASIAWVIYFSEESIAVVDRKVAEGGFVHGKRASE---------------------LTAGEHAQLSALARLGSYPNLFQLPVLANVLLGGRPWLDRVLDEFPHQSALLHHYLFACALSYAITFFATTLRDRNVIGITADLAMLATGTALPFLTMFVDVAAFPAATTLNPLDYNVGFL 457
BLAST of NO03G05040 vs. NCBI_GenBank
Match: XP_009038043.1 (hypothetical protein AURANDRAFT_64930 [Aureococcus anophagefferens] >EGB07426.1 hypothetical protein AURANDRAFT_64930 [Aureococcus anophagefferens]) HSP 1 Score: 125.9 bits (315), Expect = 2.900e-25 Identity = 104/336 (30.95%), Postives = 162/336 (48.21%), Query Frame = 0 Query: 96 DLDGTGATLVMPSATTGPTSAAAPAVF-QLWKRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGWVPLAIMWTGVINCISCLPMSKFRTGTSGGY-DTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKEL---EEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIIL-GGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVV-VLTPFVTTVVDVGTLGREVSINPFEVY 425 ++D AT+ G A AVF +RRLWTKAD++H+HA SG F+V L++LY AG A A G + +++ GV N ++ +PM++F + D K GF G G+T++ IW A +FSG YPA + P P + + +V +N E+ L + EE M G K+ A E + IL +R+AS+PNL L LY++ L W ++ ++P + L +H F AV ++ TL+DR+L++LR L++ VV V P V+ +D LG V++NP + + Sbjct: 93 EMDLAKATVDASEGLAGLGGDAIAAVFGDTVRRRLWTKADFMHAHAASGAYFLVGAPLWLLY--SHATAAGHLDAVATWRFDGPLETSLLVAGVANALTAIPMARFSSNKMFDVTDLKANGFTFGGAGLTLMSIWIAAWFSGGYPAALLPAGPAFFLLWASVCAGTTLNWEIMLQQNFEAAEEANKEMATRGGRKTD-------------LERKFKTATPEELNEKAIL-YRLASWPNLTQLLFLYSLCLPDAAMWWAGVVERYPNQGVLGYHYGFASAVGYALSMFSETLRDRKLVSLRVDLIILVVGVFLPMVSVGLDGVLLGDTVTVNPLDYW 412 The following BLAST results are available for this feature:
BLAST of NO03G05040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 9
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G05040 ID=NO03G05040|Name=NO03G05040|organism=Nannochloropsis oceanica|type=gene|length=1386bpback to top protein sequence of NO03G05040.1 >NO03G05040.1-protein ID=NO03G05040.1-protein|Name=NO03G05040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=430bpback to top Synonyms
Publications
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