NO03G04900, NO03G04900 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G04900 vs. NCBI_GenBank
Match: EWM29920.1 (tf1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 261.9 bits (668), Expect = 1.700e-66 Identity = 131/207 (63.29%), Postives = 155/207 (74.88%), Query Frame = 0 Query: 6 QGAPRYLISLALFFSSSLPFQLTQHFVLAHAQMASTLKQSAAPSSLQDAGVIPDVLDCFSPGIQIRVAYDNHLVTPGATLLPVQAVHMPTVTLEGSYPGRLYTLVMSDPDAPSPEHPTHREWLHWIVTDIPGGAKDIAEGTQVAAYMPPTPPKGTHRYVFTVMEQPGRESRVLRPPMQRGGFRTRAFLKEGGMEVVGATFFYAAHQN 213 + +P +L++ A F S + Q F +A K AA +L+DAGVIPDV+D F P +QIR+ YD+ L+TPGAT+LP Q VHMP VTLEGS PG LYTL MSDPDAPSPEHP+HRE+LHWIV++IPGGA DIAEGT+V Y PPTPP+GTHRYV TVMEQPG +RPP QRGGFRTR F KE GM+VVGATFF AAHQ+ Sbjct: 3 RSSPPFLLTFA-FLSVASILQPPHRF----GAVAQMTKHHAA--NLRDAGVIPDVIDNFDPQVQIRITYDSLLITPGATILPRQGVHMPQVTLEGSQPGHLYTLFMSDPDAPSPEHPSHREYLHWIVSNIPGGANDIAEGTEVVPYAPPTPPQGTHRYVLTVMEQPGTNPMTVRPPAQRGGFRTRTFGKEAGMDVVGATFFKAAHQS 202
BLAST of NO03G04900 vs. NCBI_GenBank
Match: XP_016560013.1 (PREDICTED: protein MOTHER of FT and TFL1-like [Capsicum annuum] >PHT56103.1 hypothetical protein CQW23_04589 [Capsicum baccatum] >PHT90679.1 hypothetical protein T459_05792 [Capsicum annuum]) HSP 1 Score: 149.4 bits (376), Expect = 1.200e-32 Identity = 75/177 (42.37%), Postives = 102/177 (57.63%), Query Frame = 0 Query: 38 MASTLKQSAAPSSLQDAGVIPDVLDCFSPGIQIRVAYDNHLVTPGATLLPVQAVHMPTVTLEGS-YPGRLYTLVMSDPDAPSPEHPTHREWLHWIVTDIPGGAKDIAEGTQVAAYMPPTPPKGTHRYVFTVMEQPGRESRVLRPPMQRGGFRTRAFLKEGGMEVVGATFFYAAHQNN 214 MAS + L VI DV+D F P ++ V YD+ ++ G + P A H PT+ ++GS LYTLVM+DPDAPSP PT REWLHWIVTD+P G D +EG +V YM P PP G HRYVFT+ Q + +PP R F+TR F + G+ + A ++ + + + Sbjct: 1 MASMETPPRSVEPLVAGKVIGDVIDLFVPAVEFTVEYDSKQISNGVEITPAAAAHKPTLHIKGSPDSNNLYTLVMADPDAPSPSEPTFREWLHWIVTDVPEGG-DASEGREVVEYMGPKPPAGIHRYVFTLFRQTESQQVPHKPPEVRSNFKTRQFATDNGLGLPVAALYFNSQKEH 176
BLAST of NO03G04900 vs. NCBI_GenBank
Match: PHU26429.1 (hypothetical protein BC332_04761 [Capsicum chinense]) HSP 1 Score: 149.1 bits (375), Expect = 1.600e-32 Identity = 75/177 (42.37%), Postives = 102/177 (57.63%), Query Frame = 0 Query: 38 MASTLKQSAAPSSLQDAGVIPDVLDCFSPGIQIRVAYDNHLVTPGATLLPVQAVHMPTVTLEGS-YPGRLYTLVMSDPDAPSPEHPTHREWLHWIVTDIPGGAKDIAEGTQVAAYMPPTPPKGTHRYVFTVMEQPGRESRVLRPPMQRGGFRTRAFLKEGGMEVVGATFFYAAHQNN 214 MAS + L VI DV+D F P ++ V YD+ ++ G + P A H PT+ ++GS LYTLVM+DPDAPSP PT REWLHWIVTD+P G D +EG +V YM P PP G HRYVFT+ Q + +PP R F+TR F + G+ + A ++ + + + Sbjct: 1 MASMETPPRSVEPLVAGKVIGDVIDLFVPAVEFTVEYDSKQISNGVEITPAAAAHKPTLHIKGSPDSNNLYTLVMADPDAPSPTEPTFREWLHWIVTDVPEGG-DASEGREVVEYMGPKPPAGIHRYVFTLFRQTESQQVPHKPPEVRSNFKTRQFATDNGLGLPVAALYFNSQKEH 176
BLAST of NO03G04900 vs. NCBI_GenBank
Match: XP_011652965.1 (PREDICTED: protein MOTHER of FT and TF 1 [Cucumis sativus] >KGN64620.1 hypothetical protein Csa_1G071830 [Cucumis sativus]) HSP 1 Score: 145.6 bits (366), Expect = 1.800e-31 Identity = 77/163 (47.24%), Postives = 94/163 (57.67%), Query Frame = 0 Query: 50 SLQDAGVIPDVLDCFSPGIQIRVAYDNHLVTPGATLLPVQAVHMPTVTLEGSYPGRLYTLVMSDPDAPSPEHPTHREWLHWIVTDIPGGAKDIAEGTQVAAYMPPTPPKGTHRYVFTVMEQPGRESRVLRPPMQRGGFRTRAFLKEGGMEV-VGATFFYAAHQ 212 SL VI DVLD F+P + V+Y + V G + P A PTV ++ +LYTLVM DPDAPSP PT REWLHWIV DIP GA D +G +V YM P PP G HRYVF V +Q LRPP R F+TR F + G+ + V A +F + Q Sbjct: 7 SLVVGRVIGDVLDMFTPAADVSVSYGSKHVANGGEIKPFVAADRPTVLIQAPVSNQLYTLVMVDPDAPSPSEPTFREWLHWIVVDIPEGA-DANKGKEVVHYMGPQPPTGIHRYVFAVFKQNTPLGGRLRPPTTRSNFKTRQFASQNGLGLPVAAVYFNSQKQ 168
BLAST of NO03G04900 vs. NCBI_GenBank
Match: XP_009757896.1 (PREDICTED: protein MOTHER of FT and TF 1-like [Nicotiana sylvestris] >XP_016507970.1 PREDICTED: protein MOTHER of FT and TFL1-like [Nicotiana tabacum]) HSP 1 Score: 145.2 bits (365), Expect = 2.300e-31 Identity = 73/160 (45.62%), Postives = 96/160 (60.00%), Query Frame = 0 Query: 56 VIPDVLDCFSPGIQIRVAYDNHLVTPGATLLPVQAVHMPTVTLEGS-YPGRLYTLVMSDPDAPSPEHPTHREWLHWIVTDIPGGAKDIAEGTQVAAYMPPTPPKGTHRYVFTVMEQPGRESRVLRPPMQRGGFRTRAFLKEGGMEV-VGATFFYAAHQNN 214 VI DV+D F P ++ V Y + ++ G + P A H P + ++GS LYTLVM+DPDAPSP PT REWLHWIVTDIP G D +EG ++ YM P PP G HRYVFT+ Q E +PP R F TR F + G+ + V A +F + ++N Sbjct: 16 VIGDVVDMFVPVVEFSVEYGSKQISNGVEIKPAAAAHKPRLHIQGSPDSNNLYTLVMADPDAPSPSEPTFREWLHWIVTDIPEGG-DASEGRELTEYMGPQPPTGIHRYVFTLFRQTEAEQVPHKPPAGRANFNTRKFASDNGLGLPVAALYFNSQKEHN 174
BLAST of NO03G04900 vs. NCBI_GenBank
Match: XP_010268882.1 (PREDICTED: protein MOTHER of FT and TFL1-like [Nelumbo nucifera]) HSP 1 Score: 144.4 bits (363), Expect = 4.000e-31 Identity = 76/155 (49.03%), Postives = 94/155 (60.65%), Query Frame = 0 Query: 56 VIPDVLDCFSPGIQIRVAYDNHLVTPGATLLPVQAVHMPTVTLEGS-YPGRLYTLVMSDPDAPSPEHPTHREWLHWIVTDIPGGAKDIAEGTQVAAYMPPTPPKGTHRYVFTVMEQPGRESRVLRPPMQRGGFRTRAFLKEGGMEV-VGATFFYA 209 VI DVLD FSP ++ V Y + V G + P A + P V L GS LYTLVM+DPDAPSP PT REWLHWIV DI G+ D +G ++ +YM P PP G HRYVFT+ +Q G + RPP RG F TR F + G+ + V A +F A Sbjct: 13 VIGDVLDMFSPTLEFTVHYGSKQVANGCEIKPSAAANKPKVQLSGSRLSNNLYTLVMTDPDAPSPSEPTMREWLHWIVVDIAEGS-DATKGKELVSYMGPRPPTGIHRYVFTLFQQKGPITEETRPPDARGSFNTRNFAAQNGLGLPVAAVYFNA 166
BLAST of NO03G04900 vs. NCBI_GenBank
Match: XP_006341565.1 (PREDICTED: protein MOTHER of FT and TF 1 [Solanum tuberosum]) HSP 1 Score: 141.7 bits (356), Expect = 2.600e-30 Identity = 69/156 (44.23%), Postives = 93/156 (59.62%), Query Frame = 0 Query: 56 VIPDVLDCFSPGIQIRVAYDNHLVTPGATLLPVQAVHMPTVTLEGSYPGRLYTLVMSDPDAPSPEHPTHREWLHWIVTDIPGGAKDIAEGTQVAAYMPPTPPKGTHRYVFTVMEQPGRESRVLRPPMQRGGFRTRAFLKEGGMEVVGATFFYAAHQ 212 VI DV+D F P + + V Y N VT G + P A+ P +T+ G +P YTLVM+DPDAPSP PT REW+HWIVTDIP G ++A G +V Y+ P PP G HRY+ + Q +L+PP+ R F TR F + + AT ++ AH+ Sbjct: 13 VIGDVVDMFVPSVTMSVHYANKHVTNGCDIKPSIAIEPPKITI-GGHPDEFYTLVMTDPDAPSPSEPTMREWVHWIVTDIP-GCSNVARGKEVLGYVGPRPPVGIHRYILVLFRQNAPMQGILQPPVARAHFCTRVFAHQLDLGTPVATVYFNAHK 166
BLAST of NO03G04900 vs. NCBI_GenBank
Match: XP_016604703.1 (hypothetical protein SPPG_07875 [Spizellomyces punctatus DAOM BR117] >KNC96663.1 hypothetical protein SPPG_07875 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 141.7 bits (356), Expect = 2.600e-30 Identity = 73/164 (44.51%), Postives = 100/164 (60.98%), Query Frame = 0 Query: 50 SLQDAGVIPDVLDCFSPGIQIRVAYDNHLVTPGATLLPVQAVHMPTVTLEGSYPGRLYTLVMSDPDAPSPEHPTHREWLHWIVTDIPGGAKDIAEGTQVAAYMPPTPPKGT--HRYVFTVMEQPGRESRVLRPPMQRGGFRTRAFLKEGGMEVVGATFFYAAHQ 212 +L D+ VIPDV+ F+P I + ++Y N V+ G + P +A H P V+ P LYTLV++DPDAPS EHP R W HW+VTDI G D+ +G V +Y PPTPPKGT HRYVF + Q + R L+ P RGG+ + F + ++ GA FF + H+ Sbjct: 8 ALVDSQVIPDVISDFTPTIALDISYKNRKVSLGNEISPSEAEHEPKVSFSPPNPDDLYTLVLADPDAPSREHPAKRCWRHWVVTDITHG--DVKKGKVVTSYHPPTPPKGTHLHRYVFILFAQ-SKSLRHLKLPEDRGGWHVQEFADQYDLKPEGANFFVSQHE 168
BLAST of NO03G04900 vs. NCBI_GenBank
Match: AAO31791.1 (SP2G [Solanum lycopersicum]) HSP 1 Score: 141.4 bits (355), Expect = 3.400e-30 Identity = 70/160 (43.75%), Postives = 94/160 (58.75%), Query Frame = 0 Query: 56 VIPDVLDCFSPGIQIRVAY-DNHLVTPGATLLPVQAVHMPTVTLEGS-YPGRLYTLVMSDPDAPSPEHPTHREWLHWIVTDIPGGAKDIAEGTQVAAYMPPTPPKGTHRYVFTVMEQPGRESRVLRPPMQRGGFRTRAFLKEGGMEVVGATFFYAAHQNN 214 VI DVLD F P + V Y + G + P +A P V ++GS + LYTLVM+DPDAPSP PT REWLHWIVTDIP G D ++G ++ YM P PP G HRYVFT+ Q E +PP R F+TR F + G+++ A ++ + + + Sbjct: 16 VIGDVLDMFVPVVDFTVEYASKQISNNGVEIKPAEAAQKPRVHIKGSLHSNNLYTLVMADPDAPSPSEPTFREWLHWIVTDIPEGG-DASQGREMVEYMGPKPPAGIHRYVFTLFRQKEAEQVPHKPPQGRSNFKTRQFASDNGLDLPVAALYFNSQKEH 174
BLAST of NO03G04900 vs. NCBI_GenBank
Match: NP_001316375.1 (protein SELF PRUNING 2G [Solanum lycopersicum]) HSP 1 Score: 141.4 bits (355), Expect = 3.400e-30 Identity = 70/160 (43.75%), Postives = 94/160 (58.75%), Query Frame = 0 Query: 56 VIPDVLDCFSPGIQIRVAY-DNHLVTPGATLLPVQAVHMPTVTLEGS-YPGRLYTLVMSDPDAPSPEHPTHREWLHWIVTDIPGGAKDIAEGTQVAAYMPPTPPKGTHRYVFTVMEQPGRESRVLRPPMQRGGFRTRAFLKEGGMEVVGATFFYAAHQNN 214 VI DVLD F P + V Y + G + P +A P V ++GS + LYTLVM+DPDAPSP PT REWLHWIVTDIP G D ++G ++ YM P PP G HRYVFT+ Q E +PP R F+TR F + G+++ A ++ + + + Sbjct: 19 VIGDVLDMFVPVVDFTVEYASKQISNNGVEIKPAEAAQKPRVHIKGSLHSNNLYTLVMADPDAPSPSEPTFREWLHWIVTDIPEGG-DASQGREMVEYMGPKPPAGIHRYVFTLFRQKEAEQVPHKPPQGRSNFKTRQFASDNGLDLPVAALYFNSQKEH 177 The following BLAST results are available for this feature:
BLAST of NO03G04900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G04900 ID=NO03G04900|Name=NO03G04900|organism=Nannochloropsis oceanica|type=gene|length=1532bpback to top protein sequence of NO03G04900.1 >NO03G04900.1-protein ID=NO03G04900.1-protein|Name=NO03G04900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=214bpback to top Synonyms
Publications
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