NO03G04830, NO03G04830 (gene) Nannochloropsis oceanica

Overview
NameNO03G04830
Unique NameNO03G04830
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4032
Alignment locationchr3:1376172..1380203 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1376172..1380203 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO03G04830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G04830.1NO03G04830.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573108gene_1692Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G04830.1NO03G04830.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G04830 ID=NO03G04830|Name=NO03G04830|organism=Nannochloropsis oceanica|type=gene|length=4032bp
AAAAACACAAATGCATAGACAAATAGGGCAGCCTCATAATCACTACTTCA
CCTGCCTAGCCCACTAAACATGCGGgtaagttttattgacccagctaggc
atgtgcgacctcccgtcgtccttccttttcttactaagccctccccacat
aaccgcaaccaccaagTCTATACAGAATTTTGGCTTCTTCAATTTATTTG
GCAAGACCAAGAAGAATGACAAAAAGAGGGCGCAGAAGCAGTCCGAGAAG
AAGGCGGGTGATGGATCGTCCCTTGAGGACGAGgtacgtgtgtgtccgac
ttgggagactgggaagtgtatggctgcaattgtgtctagctgcgcatttg
tgtgtgcatacacagccagattcaggtgccgcacaagtgggggtgccccg
gacatcgtctgccaccgaacaactccccccccccgatttatttctccaca
aacggctttgcagcctcccctcattttctccctcgcgcacacccccggca
agcttttcttggttccttcaacaatttgcttaaagcctccaacccttcct
tatcatttccttcctatttccaaaaagGTGGCTCAAAAGATTAAGCAAGA
AGCTCCAGAGCCCATCGTTAAGACAGGCTCGGAGGCGGCCGCGAAGCCGC
AAGTGAGCACGGGTCTTGTTTATCTCGCACAGGCCAAGCCCGCCATTACT
TCTACTTCTTCTCCCGAATCGAGTGTTTCCTGTGCTTCTTCCAAAGAAGA
AGACGACGAGGACGACGAGGACGACGACGAAGATGACGACGACGAGGAGG
AGGACGAGGACGAGAACGAGGAGGACGAGGAGGAGGAGACCGAGGACGAG
GAGGACGAGGAGGAGGAGACCGAGGACGAGGACGAGACGGAGGACGAAGA
GGGGGATGAGTTTGAAGAGGAGGAGGAGGCGGAGGAGGAGAAGGGCGAGG
GGCTCGACCTCAGGCCTTGCGCGCGGGCAGTGGTGAAGAAAGACAAGCAA
GAGGTGGTGGACCAGGAGGAGGTCGAGGACGAGGAGGGCTTCAATTCTCC
CTGTCATCGGTCAATGAAGATCGAGGAGGAAAGTGATGAGGAAGAGGAGG
AGGGATTGGAGAAGGAGGTCGAAGAGGGGGATGCGGAGGAGGGGGTGGAG
GCCGAGGAGGAGGTCGACGAGGAGGAGGTCGACAAGGAGGAGGAGGAGGA
GGAGGAGGAGAACGGAGAGGAGGACGAGGAGGACGAGGAGGACAACGAAG
AGGTCGAGGAAGGAGAGGGTGAGGAGGAGGGAGGTGAAAAGGTCAACCTA
AGTCCCTGTCCGCGGGTTATCGAGAAGAAAGACGAGCAGCAGGAGGTGGT
GGACGAGGAGGAGGACGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAG
AGGAGGGCCTGAATCACTCTTCTCGTCCTCGGTCAGTGAGGATTGAAGCG
GAGGTCGAGGAGAAGGACGATGACGAAGAGGAGGACGAGGAAGAAGTGGA
GGATGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAGGAGGGGA
TCAATCTCAGTCCCTGCCCCCGGGCAGTGGTGAAGAAAGTCGAGCAGGAA
GATGTGGAGGACGAGGAGGAGGGAGATGTGGAGGGTGAGGAGGAGGAGGA
CGAGGAAGAGGAGGAGGAGGAGGAGAAGGGTGAAGATGAGGAGGAGGAAG
AAGAGGAGGGGATCAATCTCAGTCCCTGCCCCCGGGCAGTGGTGAAGAAA
GTCGAGCAGGAAGATGTGGAGGACGAGGAGGAGGGAGATGTGGAGGGTGA
GGAGGAGGAGGACGAGGAAGAGGAGGAGGAGGAGGAGAAGGGTGAAGATG
AGGAGGAGGAAGAAGAGGAGGGGATCAATCTCAGTCCCTGCCCCCTGGCG
GTGGTGAAGAAAGTCGAGCAGGAAGATGTGGAGGACGAGGAGGAGGGAGA
TGTGGAGGGTGAGGAGGAGGAGGACGAAGAGGAGGAAGATGAGGATGAGG
AGGGCTTGAACCATTCTCCCTGTCCTCGGTCAGTGAAGGTCGAAAAGGGG
GCCGAGAAGGACGTCGAGCCGAAGGTCGAGGAGGAGGTCGAGCCGCAGGA
GGAGGAGGAGGAGGTCGAGCAGGAGGAGGAGGTCGAGCAGGGGGAGGTCG
AGCAGGAGGAGGAAGAGGAAAAGGAGGAGGAGGAGGAGGAGGTTGAGCAG
GAAGAGGAGGAGGAGGATCGCGCAGGGCCCAATGTCAGCCTCCCCCCCGT
GGAGGAAGGTAGGGCAATACTGGTGGGTGCAAGCGATCGCTCTGCTGCTG
AAAAGATCAGCTTGAAGGAGGAAGAGAGAAAGGTGGAGGAAGGAAGGCAT
GAGAGCGATAAGGACGAGGACGATGATGGAAACGAAGACGAAGACGAAGA
CGAGGAAGGATTGAATTTGAGTCCTTGCCCCGTAGAAAAACGCAAGACCA
TCTCGGCGGGGACGAAGGTCCAGCTTGCCAGGAGCAGCAGTAGCAGGAGC
GGACAGAATGATGATAATAAAAATGGCGGCTTTTTCTTGTCCAACATAAA
GCTGAGATCTCCCTTTGCGGCTTATCAGAGAGCAGTAGCTGCCTCCTCCT
CCTTTTCCTCCTCGTCCTTCCACTCTTCCGCTACCATCACCAAGAAGAAA
CGGGAGGAGAAGAATAAGACCTTCTCCACTCCCTCTTCCGTGAGCATGGC
CGTTGCTCCCGTCTCCACTTCCGCCATCTCCGCCTCTGCTTCCTCCCCTT
CCGGCTCCCCCTCCTCCTCCCCTTCCCTCTCCGCCTCCTCCTCCGCTACC
ACAATCAAGAAGGAGGCAGAGGAGAAGACGCCGACCTCCTCAATCCCATC
TTCCCTGAAGGTGGCCCAGGCTTCCGTCTCCGCCTCCGCCTCCTCCTTCT
CCTCCTTGTCCATTGCTACCATCACAAAAAAGAAAGCAGAGGAGAAGACG
ACGACGGCTTCCGTTCCATCCTCCCTGACGGTGGCGGCGGCTCCAGTCTC
CCCCTCTACCTCTTCTTCCTCCTCCTCCCCGTCCCCCTCCGCCTCCGCAT
CCTCCTCCTCCTCCTTGTCCAATGCTACCATCGCCAAAAAGGGAACAGAG
GAGAGGACGACGACGGCTTCCATTCCATCCTTGCTGACGGTGGCCGCGGC
TCCTGTCTCCTCCTCGGCCGCCTCCTCCGCCTTCTCCTCCTCCCTTGTAT
CCGCCTCTTCATTCTCCGCTACCATCACCAAGAGAGAAGCAGAGGAGAAG
ACGAGTACCTCTTCTCCCTCCTCCCTGACGGTGACCATGGCTCCCTCTCC
TTTTGGAAACTGCTCTCCTCCGCATGGAAGGACAGCGTCAGCTGTGATTA
GTCCATTAGAAGCAGCAGGAGTAGACGCAGATGAGAGCAGGAAGGTGATG
GTTCGGGAGGTGGAATGGCGGTTGGTGCTTGGAAAGGCTGCGATGGTGGC
GACGATGGGGTGGGGAGGGATGTACGTGGCAGTGGTGCTGGCGTTGAGAG
TGGGGTTGCTGACTGTGATGTAAAGAGGTAAATAAAAGGCCGGGGTGAAA
GAGGAAATGGGAAGGAAGTGGAGGACGAAGGAGAGGAGGAAGGAAAAAGG
ATTGCGGTGTAGGTACATATGTTGATTGTAAGACATATCCGGAAATTTAG
CTGAGTCGTTTGATTTTGTGAAAGAACATTAGTGCATACGCCCGAGTTGA
TCTTGAAGGGTGGCTAAGGAACTTAGCTGGATTGAAAGAGGCAAGAGCAT
AATTAGGAAAGTCGACATTTAGATAATTGATTAGATTGATAGGTTGGTAT
CTTGTATATTTCGCCGATGCCCTACGAGCAGTGTCTGTGTATGGCCATGG
CGAATAAATTGGTTTGTATGAGATATAGTGAGTTTACATTTTTAGACTGT
ATGAAATGGTTCCGACTTCTGGTTTGTTATTCGATGGTTGTCTTTTGTAT
TCGCGTTTGAGCTCAAGGAAACAAAGGAAAGAGGAGAAGAAGATGTCACG
CCATAAAAGGAAGCATCCCCGGATCTCCCCGG
back to top

protein sequence of NO03G04830.1

>NO03G04830.1-protein ID=NO03G04830.1-protein|Name=NO03G04830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1023bp
MRSIQNFGFFNLFGKTKKNDKKRAQKQSEKKAGDGSSLEDEVAQKIKQEA
PEPIVKTGSEAAAKPQVSTGLVYLAQAKPAITSTSSPESSVSCASSKEED
DEDDEDDDEDDDDEEEDEDENEEDEEEETEDEEDEEEETEDEDETEDEEG
DEFEEEEEAEEEKGEGLDLRPCARAVVKKDKQEVVDQEEVEDEEGFNSPC
HRSMKIEEESDEEEEEGLEKEVEEGDAEEGVEAEEEVDEEEVDKEEEEEE
EENGEEDEEDEEDNEEVEEGEGEEEGGEKVNLSPCPRVIEKKDEQQEVVD
EEEDEEEEEEEEEEEEEGLNHSSRPRSVRIEAEVEEKDDDEEEDEEEVED
EEEEEEEEEEEEEEGINLSPCPRAVVKKVEQEDVEDEEEGDVEGEEEEDE
EEEEEEEKGEDEEEEEEEGINLSPCPRAVVKKVEQEDVEDEEEGDVEGEE
EEDEEEEEEEEKGEDEEEEEEEGINLSPCPLAVVKKVEQEDVEDEEEGDV
EGEEEEDEEEEDEDEEGLNHSPCPRSVKVEKGAEKDVEPKVEEEVEPQEE
EEEVEQEEEVEQGEVEQEEEEEKEEEEEEVEQEEEEEDRAGPNVSLPPVE
EGRAILVGASDRSAAEKISLKEEERKVEEGRHESDKDEDDDGNEDEDEDE
EGLNLSPCPVEKRKTISAGTKVQLARSSSSRSGQNDDNKNGGFFLSNIKL
RSPFAAYQRAVAASSSFSSSSFHSSATITKKKREEKNKTFSTPSSVSMAV
APVSTSAISASASSPSGSPSSSPSLSASSSATTIKKEAEEKTPTSSIPSS
LKVAQASVSASASSFSSLSIATITKKKAEEKTTTASVPSSLTVAAAPVSP
STSSSSSSPSPSASASSSSSLSNATIAKKGTEERTTTASIPSLLTVAAAP
VSSSAASSAFSSSLVSASSFSATITKREAEEKTSTSSPSSLTVTMAPSPF
GNCSPPHGRTASAVISPLEAAGVDADESRKVMVREVEWRLVLGKAAMVAT
MGWGGMYVAVVLALRVGLLTVM*
back to top
Synonyms
Publications