Properties
Property Name Value
Description Unknown protein
Alignments
The following features are aligned
Aligned Feature Feature Type Alignment Location
chr3 genome chr3:1363401..1367978 +
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO03G04800 vs. NCBI_GenBank
Match:
EWM29894.1 (hypothetical protein Naga_100035g17 [Nannochloropsis gaditana])
HSP 1 Score: 183.0 bits (463), Expect = 3.300e-42
Identity = 169/257 (65.76%), Postives = 177/257 (68.87%), Query Frame = 0
Query: 153 EDGKLFLGCKKEGCNGILLVGTTTRHGAPYQCPRCLNKQKYCQDCQQLYINFRRHRILGHELYEFQRKRQVLIRNNHGLFVPADQSKKVPVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKEEGEMMIYAPAGAVWTGGREGGRGGVPPTPEVAEELDDASDILVKLMQGQSSSNKRSK 410
EDG+L+LGCKKEGCNGILLV TT HGAPYQCPRCLNKQKYCQDCQQLYINFRRHR LGHELYEFQRKRQVL+RN HGLFVP +QSKK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXX I++PAGAV +G R G +P PEVAEELDDASDILVKLMQG SSNKRSK
Sbjct: 142 EDGRLYLGCKKEGCNGILLVEPTTHHGAPYQCPRCLNKQKYCQDCQQLYINFRRHRTLGHELYEFQRKRQVLVRNIHGLFVPGNQSKK------GNLVTAPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALSTVGLDRCRSRRGRHAWVQGCDEIGLEEMGEVEAGLGXXXXXXXXXXXXIHSPAGAV-SGTRRHDGGRLPAPPEVAEELDDASDILVKLMQG--SSNKRSK 389
BLAST of NO03G04800 vs. NCBI_GenBank
Match:
EWM29893.1 (hypothetical protein Naga_100035g17 [Nannochloropsis gaditana])
HSP 1 Score: 150.2 bits (378), Expect = 2.300e-32
Identity = 159/257 (61.87%), Postives = 166/257 (64.59%), Query Frame = 0
Query: 153 EDGKLFLGCKKEGCNGILLVGTTTRHGAPYQCPRCLNKQKYCQDCQQLYINFRRHRILGHELYEFQRKRQVLIRNNHGLFVPADQSKKVPVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKEEGEMMIYAPAGAVWTGGREGGRGGVPPTPEVAEELDDASDILVKLMQGQSSSNKRSK 410
EDG+L+LGCKKEGCNGILLV TT HGAPYQCPRCLNKQKYCQDCQQLYINFRRHR LGHELYEFQRKRQ + G V A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXX I++PAGAV +G R G +P PEVAEELDDASDILVKLMQG SSNKRSK
Sbjct: 142 EDGRLYLGCKKEGCNGILLVEPTTHHGAPYQCPRCLNKQKYCQDCQQLYINFRRHRTLGHELYEFQRKRQ----SKKGNLVTA-----------------PGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALSTVGLDRCRSRRGRHAWVQGCDEIGLEEMGEVEAGLGXXXXXXXXXXXXIHSPAGAV-SGTRRHDGGRLPAPPEVAEELDDASDILVKLMQG--SSNKRSK 374
The following BLAST results are available for this feature:
BLAST of NO03G04800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (
BLASTP analysis of N. oceanica IMET1 genes )
Total hits: 2
500 1000 1500 2000 2500 3000 3500 4000 4500 Expect = 3.30e-42 / Id = 65.76 Expect = 2.30e-32 / Id = 61.87 Sequence EWM29894.1 EWM29893.1
Match Name E-value Identity Description
EWM29894.1 3.300e-42 65.76 hypothetical protein Naga_100035g17 [Nannochlorops... [more] EWM29893.1 2.300e-32 61.87 hypothetical protein Naga_100035g17 [Nannochlorops... [more]
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Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence
>NO03G04800 ID=NO03G04800|Name=NO03G04800|organism=Nannochloropsis oceanica|type=gene|length=4578bp back to top protein sequence of NO03G04800.1
>NO03G04800.1-protein ID=NO03G04800.1-protein|Name=NO03G04800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=692bp back to top