NO03G04740, NO03G04740 (gene) Nannochloropsis oceanica

Overview
NameNO03G04740
Unique NameNO03G04740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3209
Alignment locationchr3:1347844..1351052 -

Link to JBrowse

Properties
Property NameValue
DescriptionPotassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1347844..1351052 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006811ion transport
GO:0055085transmembrane transport
GO:0055085transmembrane transport
GO:0034220ion transmembrane transport
GO:0006811ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005216ion channel activity
GO:0005216ion channel activity
Vocabulary: INTERPRO
TermDefinition
IPR018490cNMP-bd-like
IPR005821Ion_trans_dom
IPR000595cNMP-bd_dom
Homology
BLAST of NO03G04740 vs. NCBI_GenBank
Match: CEO99113.1 (hypothetical protein PBRA_001018 [Plasmodiophora brassicae])

HSP 1 Score: 227.3 bits (578), Expect = 2.100e-55
Identity = 133/446 (29.82%), Postives = 239/446 (53.59%), Query Frame = 0
Query:  452 WIIDPGALWRIRWDILILILIIWTSYSIPYRASFS-TRSSGIEAWSELSIDIVFCLDVFLNFITAYY----ESEGILQTNPRAIARRYLRGWFFLDLVSSIPISELSS----ALSPTLARVFLALKFVKLLRLVRLMRYIDSKEMAMFFTPSMLRLFTTFVLLAWIWHVITCLYWYISISQGLG-SSEWTPDADYHHNTDILNYFLCFLWTVQATFSIQTYSPPEKMAEAIFTIFCYLVGIFLNAYVIGSAGSALQSMDQDKNEQRQLMDRIITYMKKRQLPAYFQRIILDFYNYMSAKHS-EQGILTDLPPAIQLRLSLLLNRELVKNIPLLKQLELNTIIGLMQTLQSTMYMPGEHVFKTGEKGQSLYFVKNGQLEITLDNVNVISN--LQKGEMFGQVALTTDSNHDFNVRAAVYSEVLSLPR-------EAYEDLSAESEKF 878
            WII P   WR+RWDILI +L+++     P + +F+ T  S +  +++ + D +F LD+ LNF+TA+       +G ++  P AIAR YLR WF++DLV+++P+  + +    + S +  ++   L+  KL+R++++ R       A    P+M RL  +F LL  +WH   C YW +++  G G S+ W+P+  + +   +L Y    LW V A   +     P   A   F+I          A ++GSA SAL  +     E++  M+ ++ +M++R +    Q  ILD+Y+Y     S  + +L +L   ++++L L+LNR+L+ N+P+ K L  N I+ +++ L+  +Y+P E +   GEKG  +YFV  G++E+ +      +   +++G  FG+  L  +S    +++A  + E+L L +         Y D +A  +K+
Sbjct:  143 WIILPSNRWRLRWDILIFLLVVYYGIMTPVQLAFAGTELSNV--YADYTFDALFALDIALNFLTAFRVESGHDKGKMEVRPSAIARTYLRKWFWIDLVATVPLDVILNLMGISFSGSFNKLVRLLRGFKLVRVLKMSRIFKRLSQASLGNPAMQRLVKSFGLLLIMWHWFACGYWALAVYNGFGDSARWSPEVQFLNAPFLLRYMQAVLWAVSANTGVGRNITPVTKATTAFSILAIATECLTYACIVGSAASALGDLGGPAAEKKLRMEAMLQFMRQRNVDKDLQERILDYYDYKFHNTSVNEDLLNELHTTLKMKLDLVLNRKLINNVPMFKDLSRNCILSIIKKLRPKIYLPKEFICVKGEKGTEMYFVLRGRVEVIVPERTTTNRVIIKEGGFFGEQCLLENSRRQNSIQALTHCELLILEKSETKRLLRLYPDFAASMQKY 586          
BLAST of NO03G04740 vs. NCBI_GenBank
Match: CEO99112.1 (hypothetical protein PBRA_001017 [Plasmodiophora brassicae])

HSP 1 Score: 202.2 bits (513), Expect = 7.300e-48
Identity = 134/476 (28.15%), Postives = 237/476 (49.79%), Query Frame = 0
Query:  452 WIIDPGALWRIRWDILILILIIWTSYSIPYRASFSTRSSGIEAWSELSIDIVFCLDVFLNFITAYY----ESEGILQTNPRAIARRYLRGWFFLDLVSSIPISELSSALSPTLARVFLALKFVKLLRLVR---------LMRYIDSKEMAMFFTPSMLRLFTTFVLLAWIWHVITCLYWYISISQGLGSSEWTPDADYHHNTDILNYFLCFLWTVQATFSIQTYSPPEKMAEAIFTIFCYLVGIFLNAYVIGSAGSALQSMDQDKNEQRQLMDRIITYMKKRQLPAYFQRIILDFYNYM--SAKHSEQGILTDLPPAIQLRLSLLLNRELVKNIPLLKQLELNTIIGLMQTLQSTMYMPGEHVFKTGEKGQSLYFVKNGQLEITLDNVNVISN--LQKGEMFGQVALTTDSNHDFNVRAAVYSEVLSLPREA-------YEDLSAESEKF-MELVEMEAIKQEQFIVKAQKNMQRL 903
            WII P   WR+RWD+ I++L+I+     P   +F    S I  + + + D +F LD+ LNF TAY       +G ++T    IA+ YL+ WF++DLV+++P+  +  AL+     +     F KL+RL+R                        P++ RL T  ++L  +WH I C YW I+   G     W P   Y        Y   + W + +T  +     P  +    FTI    +G  + A++IGS  +ALQ++D    E+R  ++RI  ++K R +    Q  ILD+Y+Y   +  H  + +L DL  A+++RL L LN++L+ N+P+ + L  N I+ +++ L   M++P E++   GE G  ++F+  G++E+ +      +   L++G  FG+  L   +   F ++A  + E+L L +         + D +A  +K+ +  + +    + QFIV+  + ++ L
Sbjct:  301 WIILPSNSWRLRWDMFIMLLVIYYGIMTPIELAFGNDVSNI--YLDYAFDALFGLDIVLNFFTAYRIEHGHQKGQVETRMFYIAKTYLKRWFWIDLVATVPMDVVFDALN-----IGFTASFNKLIRLLRGFXXXXXXXXXXXXXXXXXXXXSNPALQRLITYILMLLIMWHWIGCGYWVIAQYDGFDDGGWAPSPYYLTAPFGSRYMQAYFWAICSTTGVGVDINPRTVPSLAFTIGSICIGCMMYAFIIGSMTTALQNLDALGVEKRTKLERIYQFLKARDIDRTLQTRILDYYDYAYDNTLHGVE-LLDDLHSALKIRLDLALNQKLINNVPMFRNLSRNCILSIIERLHLKMFLPKEYICLKGEPGTEMFFIVRGRVEVMIPERTRRNRVILKEGGFFGEKCLLESTRRQFTIQAVTHCELLVLRKSETKHLLRHFPDFAASMQKYALSRMNVSGWPKIQFIVRTVRMVKLL 768          
BLAST of NO03G04740 vs. NCBI_GenBank
Match: XP_009520672.1 (hypothetical protein PHYSODRAFT_479009 [Phytophthora sojae] >EGZ25384.1 hypothetical protein PHYSODRAFT_479009 [Phytophthora sojae])

HSP 1 Score: 180.6 bits (457), Expect = 2.300e-41
Identity = 138/513 (26.90%), Postives = 250/513 (48.73%), Query Frame = 0
Query:  409 RVDAKSSLSETESLVNSYVELVCEDLRTSEKRKMLAQDQEGGTWIIDPGALWRIRWDILILILIIWTSYSIPYRASFSTRSSGIEAWSELSIDIVFCLDVFLNFITAYY-ESEGILQTNPRAIARRYLRGWFFLDLVSSIPISELSSALSPTLARVFLALKFVKLLRLVR-----LMRYIDSKEMAMFFTPSMLRLFTTFVLLAWIWHVITCLYWYISISQGLGSSEWTPDADYHHNTDI-LNYFLCFLWTVQATFSIQTYSPPEKMAEAIFTIFCYLVGIFLNAYVIGSAGSALQSMDQDKNEQRQLMDRIITYMKKRQLPAYFQRIILDFYNYMSAKHSE---QGILTDLPPAIQLRLSLLLNRELVKNIPLLKQLELNTIIGLMQTLQSTMYMPGEHVFKTGEKGQSLYFVKNGQLEI----TLDNVNVISNLQKGEMFGQVALTTDSNHDFNVRAAVYSEVLSLPREAYEDLSAESEKFMELVEMEAIKQEQFIVKAQKNMQRLAKMNR 908
            ++D + S    E + +  + L    L  S+KRK            I   + +R  WD +I + I +     P +  F  +S+GI    +  +DI++ +++ LNF T+Y  ++ G    +   I R Y++ WF +D VSS P     S+L  T   +    K +K+ R+ +     L+R + S  +     PSMLR+    V+     H+I C Y+YIS++Q +  + W P+ +  H+  +   Y   F + +  T +      P    E +FT     VGI +NA +IGSA + L ++D+++  ++  MD I  Y++ +++P   Q  I  +Y+Y      +   + +  DLP  ++L L L L+ E V+ +PL + L  + ++ ++Q L   + MPGE +   GE     YF+K GQ+ +     +DN+  + NL +G  FG+ +L T       V+A    E++ L ++ +E +      F   V     +  +  ++  +N+Q+++KMNR
Sbjct:  288 KLDEERSARVAELVDSEVMVLNATQLAQSQKRK-------ANQLTISIHSTFRHWWDFVITVSIAYVIILTPIKVGFEVQSTGISYALDAVVDIIYLIEMVLNFFTSYEDDATGEEIKDLDKIRRNYIQSWFLVDAVSSFP-----SSLIGTTNGLLTLSKILKVARVAKVSDSGLVRTV-SGHIDRSMNPSMLRMLKLTVIFLVSQHLIACTYYYISLNQSV-ETTWAPNHEIRHSNSLGQQYVDAFYFAIMVTTANDV--NPTTPIEKLFTSVMLFVGIVINASIIGSAANLLANLDKEEIARKNQMDSINDYLRFKKVPLVLQNKIRRYYDYALTTRLQDPTENLFADLPDRLKLLLKLNLHSEFVRKVPLFRALSHSGVVAIVQCLVPVVAMPGEVIIVCGEVASEFYFIKTGQVSLCVPGLVDNI-PLGNLGEGSFFGETSLLTGQPTTAEVKAERMCELMYLSKDNFEAIVDRFPTFFLAVR----RISESRMQTAQNIQKMSKMNR 779          
BLAST of NO03G04740 vs. NCBI_GenBank
Match: XP_008879211.1 (hypothetical protein H310_13476 [Aphanomyces invadans] >ETV92247.1 hypothetical protein H310_13476 [Aphanomyces invadans])

HSP 1 Score: 180.6 bits (457), Expect = 2.300e-41
Identity = 127/507 (25.05%), Postives = 251/507 (49.51%), Query Frame = 0
Query:  413 KSSLSETESLVNSYVELVCEDLRTSEKRKMLAQDQEGGTWIIDPGALWRIRWDILILILIIWTSYSIPYRASFSTRSSGIEAWSELSIDIVFCLDVFLNFITAYYESEGILQTNPRAIARR-YLRGWFFLDLVSSIPISELSSALSPTLARVFLALKFVKLLRLVRLMRYIDSKEMAMF-------FTPSMLRLFTTFVLLAWIWHVITCLYWYISISQGLGSSEWTPDADYHHNTDILNYFLCFLWTVQATFSIQTYSPPEKMAEAIFTIFCYLVGIFLNAYVIGSAGSALQSMDQDKNEQRQLMDRIITYMKKRQLPAYFQRIILDFYNYM-SAKHSEQ--GILTDLPPAIQLRLSLLLNRELVKNIPLLKQLELNTIIGLMQTLQSTMYMPGEHVFKTGEKGQSLYFVKNGQLEITL---DNVNVISNLQKGEMFGQVALTTDSNHDFNVRAAVYSEVLSLPREAYEDLSAESEKFMELVEMEAIKQEQFIVKAQKNMQRLAKM 906
            KS  +E  + +   +E     +   +  KM+ +   G  ++I   + +++ WD+ + IL ++     P +  F  +        ++ +D +F +++ L F T+Y +S    + N  ++ RR Y+ GWF  D  SS P+S  S+    +  +   ALKF+++     +     S   A           P+MLR+    ++     H I C+Y+++   +G+G+  W    D         Y  CF + +  T +      P+   E IFT    L+GI +NA +IGSA + L ++D+ +  +++ +D I  Y++ +++P   Q  I  +Y+Y+ + + SEQ   +  DLP  ++L+L+L L+R+ +  +PL K L     I ++Q ++S + MP + + + GE G+  YF+ +G +E+ +    N   +  L  G  FG+++L T+     NVRAA++ E+  + ++ +  +     +F   ++  A  ++Q  +    NMQ+++K+
Sbjct:   23 KSVGAENTNRIAELLEQELNGMSADQIAKMVQKQNHG--FVISLNSKFKLWWDVAVAILTLYVVIVTPVQVGFGLKDYNTLDNIQVFVDAMFIVELVLTFRTSYIDSATREEINDASMIRRHYMYGWFIPDAASSYPVSWFSAHDQNSSVQ---ALKFLRIXXXXXVFHLSKSPLFANLTAYVSRKMNPAMLRMLKLLLIFLLCQHFIACMYYFVVSYEGIGADTWDVPFDLDETGLTEKYVGCFYFAIMVTTANDL--QPKTTLERIFTGLMLLLGIAINATIIGSAANLLANLDKTEVARKEHLDAINDYLRFKKVPLALQDKIRHYYDYVWTVRPSEQSSNLFVDLPDRLKLQLTLSLHRDFINKVPLFKALSPGGTIAIVQCMESVVAMPKDLIIREGEPGEEFYFINSGSVEVDIAVKKNKVQLGVLGAGSYFGEISLLTNEPRSANVRAALFCELEMIRKDDFNAIIHSFPQFHIALKKIADSRQQTAI----NMQKMSKL 518          
BLAST of NO03G04740 vs. NCBI_GenBank
Match: XP_009835599.1 (hypothetical protein H257_10682 [Aphanomyces astaci] >ETV75094.1 hypothetical protein H257_10682 [Aphanomyces astaci])

HSP 1 Score: 176.4 bits (446), Expect = 4.300e-40
Identity = 131/524 (25.00%), Postives = 256/524 (48.85%), Query Frame = 0
Query:  413 KSSLSETESLVNSYVELVCEDLRTSEKRKMLAQDQEGGTWIIDPGALWRIRWDILILILIIWTSYSIPYRASFSTRSSGIEAWSELSIDIVFCLDVFLNFITAYYESEGILQTNPRAIARR-YLRGWFFLDLVSSIPISELSSALSPTLARVFLALKFVKLLR------------LVRLMRYIDSKEMAMFFTPSMLRLFTTFVLLAWIWHVITCLYWYISISQGLGSSEWTPDADYHHNTDILN-YFLCFLWTVQATFSIQTYSPPEKMAEAIFTIFCYLVGIFLNAYVIGSAGSALQSMDQDKNEQRQLMDRIITYMKKRQLPAYFQRIILDFYNYM-SAKHSEQG--ILTDLPPAIQLRLSLLLNRELVKNIPLLKQLELNTIIGLMQTLQSTMYMPGEHVFKTGEKGQSLYFVKNGQLEITL---DNVNVISNLQKGEMFGQVALTTDSNHDFNVRAAVYSEVLSLPREAYEDLSAESEKFMELVEMEAIKQEQFIVKAQKNMQRLAKMNRMGAGVGREG 917
            K++ +E  + +   +E     +   +  KM+ +   G  ++I   + +++ WD+ +  L ++     P +  F  +        ++ +D +F +++ L F T+Y +S    + N  A+ RR Y+ GWF  D  SS P+S  ++    +  +   ALKF++                V L  Y+  K       P+MLR+    ++     H I C+Y+++   +G+    W P  +    TD+ + Y  CF + +  T +      P+   E IFT    L+GI +NA +IGSA + L ++D+ +  +++ +D I  Y++ +++P   Q  I  +Y+Y+ + + SEQ   +  DLP  ++L+L+L L+R+ +  +PL K L     I ++Q ++S + MP + + + GE G+  YF+ +G +E+ +    N   +  L  G  FG+++L T+     NVRAA++ E+  + ++ +  +     +F   ++  A  ++Q  +  QK M +L K +      G  G
Sbjct:   25 KNAGTENTNRIAELLEQELNGMSADQIAKMVQKQNHG--FVISLNSKFKLWWDVAVAFLTVYVVIVTPVQVGFGLKDYQTLDNIQVFVDAMFIVELVLTFRTSYIDSATREEINDAALIRRHYMYGWFVPDAASSYPVSWFNTHDQNSSVQ---ALKFLRXXXXXXXFHLSKSPLFVSLTAYVSRK-----MNPAMLRMLKLLLIFLLCQHFIACMYFFVVSYEGISDDTWQPPFNL-DTTDLSDKYVGCFYFAIMVTTANDL--QPKTTLERIFTGLMLLLGIAINATIIGSAANLLANLDKTEVARKEHLDAINDYLRFKKVPLILQDKIRHYYDYVWTVRPSEQSSQLFVDLPDRLKLQLTLSLHRDFINKVPLFKALSPGGTIAIVQCMESVVAMPKDLIIREGEPGEEFYFINSGSVEVDIAVKKNKVQLGVLGAGSYFGEISLLTNEPRSANVRAALFCELEMIRKDDFNAIIHSFPQFHIALKKIADSRQQTAINMQK-MSKLMKKDESPESSGTPG 534          
BLAST of NO03G04740 vs. NCBI_GenBank
Match: OQR89617.1 (Voltage-gated Ion Channel (VIC) Superfamily [Thraustotheca clavata])

HSP 1 Score: 176.0 bits (445), Expect = 5.600e-40
Identity = 133/555 (23.96%), Postives = 267/555 (48.11%), Query Frame = 0
Query:  367 PLQRASAIKQKFKVTDEVLRQIKTKNRATTQRSQAWSPRTWQRVDA-KSSLSETESLVNSYVELVCEDLRTSEKRKMLAQDQEGGTWIIDPGALWRIRWDILILILIIWTSYSIPYRASFSTRSSGIEAWSELSIDIVFCLDVFLNFITAYYESEGILQTNP-RAIARRYLRGWFFLDLVSSIPISELSSALSPTLARVFLALKFVKLLRLVRLMRYIDSKEMAMF-------FTPSMLRLFTTFVLLAWIWHVITCLYWYISISQGLGSSEWTPDADYHHNTDILN-YFLCFLWTVQATFSIQTYSPPEKMAEAIFTIFCYLVGIFLNAYVIGSAGSALQSMDQDKNEQRQLMDRIITYMKKRQLPAYFQRIILDFYNY---MSAKHSEQGILTDLPPAIQLRLSLLLNRELVKNIPLLKQLELNTIIGLMQTLQSTMYMPGEHVFKTGEKGQSLYFVKNGQLEITLDNVN---VISNLQKGEMFGQVALTTDSNHDFNVRAAVYSEVLSLPREAYEDLSAESEKFMELVEMEAIKQEQFIVKAQKNMQRLAKM 906
            P +    I Q       + RQ  T   +  + S   S R   ++D+ +   ++  + V   +E     +   +  KM+ + + G  ++I   + W+  WD+L+ ++ ++     P + +F  + +      +L +D +F L++ + F T+Y +S    + N  + I + YL GWF  D  SS PIS       P+       +KF+++L++ R+     S   A           P++LR+    ++     H++ C Y+++   +G+    W P   +H N  + + Y   F + +  T +      PE   E IFT    L+GI +NA +IGSA + L ++D+ +  +++ +D I  Y++ +++P   Q  I  +Y+Y   +     +  +  DLP  ++L+L+L L+R+ +  +PL K L     I ++Q ++S + MP + + + GE G   YF+ +G +EI ++  +    +  L  G  FG++AL T+     NVRA ++ E+  + ++ +  +     +F   ++  A  ++Q  +    NMQ+++K+
Sbjct:    5 PTRSVPGISQVAHAAVSLSRQ--TGGESPGKESSIMSSRLRGKLDSNEKRATKDNNRVADMLEQELNGMSADQIAKMVQRKRHG--FVISMNSKWKRWWDVLMAVITVYVVIVTPVQVAFELKDNAFLDDVQLFVDTMFILEIIITFRTSYVDSATREEINDVKLIQKHYLYGWFLADATSSYPISYF-----PSQGPSVQPIKFLRILKIFRVFHLSKSPLFASITAYVSRKMNPAVLRMLKLGLIFILSQHLMACSYYWLVAYEGINEHTWEP--PFHFNDSLSDRYVGAFYFAIMVTTANDL--APETTIERIFTSVMLLIGIGINASIIGSAANLLANLDKTEVARKEHLDSINDYLRFKKVPLALQDKIRHYYDYVWTVRPSDKQNQLFVDLPDRLKLQLTLSLHRDFINKVPLFKALSPGGAIAIVQCMESVVAMPQDLIIREGELGDEFYFINSGFVEIDIEVKSSRVQLGVLGAGSYFGEIALLTNEPRSANVRATLFCELEMIRKDDFNAILNSFPQFHIALKKIADSRQQTTI----NMQKMSKL 542          
BLAST of NO03G04740 vs. NCBI_GenBank
Match: WP_088245142.1 (cyclic nucleotide-binding protein [Chlamydiales bacterium SCGC AG-110-M15] >SCC90892.1 Uncharacterized protein SCG7109_BV_00020 [Chlamydiales bacterium SCGC AG-110-M15])

HSP 1 Score: 175.6 bits (444), Expect = 7.300e-40
Identity = 113/448 (25.22%), Postives = 218/448 (48.66%), Query Frame = 0
Query:  452 WIIDPGALWRIRWDILILILIIWTSYSIPYRASFSTRSSGIEAWSELSIDIVFCLDVFLNFITAYYESEGILQTNPRAIARRYLRGWFFLDLVSSIPISELSSALSPTLARVFLALKFVKLLRLVRLMR---YIDSKEMAMFFTPSMLRLFTTFVLLAWIWHVITCLYWYISISQGLGSSEWTPDADYHHNTDILNYFLCFLWTVQATFSIQTYS-PPEKMAEAIFTIFCYLVGIFLNAYVIGSAGSALQSMDQDKNEQRQLMDRIITYMKKRQLPAYFQRIILDFYNYMSAKH---SEQGILTDLPPAIQLRLSLLLNRELVKNIPLLKQLELNTIIGLMQTLQSTMYMPGEHVFKTGEKGQSLYFVKNGQLEI-TLDNVNVISNLQKGEMFGQVALTTDSNHDFNVRAAVYSEVLSLPREAYEDLSAESEKFMELVEMEAIKQEQF 892
            W++ P +L+   W+ +ILI+I++ +  +P++  F +             D++   D+  NF T Y  SEG+L  N + +   YL+ WF  D ++S+P   L+  +         A+ F++L RL+RL+R   Y    E  +   PS+LRL      +    H I C ++ I + +      W    +    +    Y     W +    ++      P    E +FT+    +G+ + AY+IG+  S + ++D      RQ MD I  YM+ R++P   Q+ I  +Y+Y+ +++   SE  +L+DLP  +   L L L+RE+++ +PL  + +   +  L++ LQ     PG+ +   GE G+ +YF+  G +E+ + D   + + L  G  FG++AL        +++A  Y ++  + ++ ++ +  +  +F    +M  I +E++
Sbjct:    3 WLLHPQSLFHREWNHVILIVILYNALLLPFQIGFGSEIPSYIITINFIADLILVTDIVFNFFTGYI-SEGLLVQNLKCVRINYLKTWFIFDFIASLPFDALALFIGIEHFGGIAAIPFLRLPRLMRLIRVKPYFRHWEKNLQVNPSILRLVKLGASVIISAHFIACSWFGIGVIEAQTGQSWLNTQNLLEASTYDQYVHSLYWALVTMTTVGFGDITPTTSTEILFTMIAMCIGVSIYAYIIGNMASLVANIDAVAQAYRQKMDSINNYMRLREIPVELQKRIRRYYDYVWSRNKGLSEVNLLSDLPAPLYTELKLFLHREVLQKVPLFHEADSVFLSALVKILQPVSSAPGDFIINEGEIGREMYFISRGNVEVLSGDGKTIYAELSDGAFFGEIALLFSEKRTASIQAKSYCDLFIMKKDDFDVVLKDYPEFAS--KMLQIAKERY 447          
BLAST of NO03G04740 vs. NCBI_GenBank
Match: CBN74810.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 174.9 bits (442), Expect = 1.200e-39
Identity = 131/463 (28.29%), Postives = 230/463 (49.68%), Query Frame = 0
Query:  447 QEGGTWIIDPGALWRIRWDILILILIIWTSYSIPYRASFSTRSSGIEAWSELSIDIVFCLDVFLNFITAYYESE-GILQTNPRAI-ARRYLRGWFFLDLVSSIPISELSSALSPTLARVFLALKFVKLLRLVRL--MRYIDSKEMAMF----FTPSMLRLFTTFVLLAWIWHVITCLYWYISIS-----QGLGSSEWTPDADYHHNTDILNYFLCFLWTVQATFSIQTYSPPEKMAEAIFTIFCYLVGIFLNAYVIGSAGSALQSMDQDKNEQRQLMDRIITYMKKRQLPAYFQRIILDFYNYM--SAKHS-EQGILTDLPPAIQLRLSLLLNRELVKNIPLLKQLELNTIIGLMQTLQSTMYMPGEHVFKTGEKGQSLYFVKNGQLEITLDNV----------NVISNLQKGEMFGQVALTTDSN-HDFNVRAAVYSEVLSLPREAYEDLSAESEKFMELVE 883
            +EG  +++   +  ++ WDI+++ILII++S+  P +  F   S G     E+ +D  F   + L F T   ++E     T+ R I ARRYL+GWF LD+ SS+P++ ++  +  T    F  +  +KLLR ++L  +  I +  +  F    F PSM R++        + H I C YW++S +     +GL    W P+ +Y        Y     +++  T+       PE  AE +F+  C  + +  NA +IGSA + L +MD     ++  MD I  YM+ R++P   Q+ I  FY Y+  S + S   G+  +LP  ++L+L++ L + L+  +PL K    +  I L+Q L  ++ +PGE + + GE    ++F+  G + +T+               I +L  G  FG+VAL  + +    NVRA  ++E+  +    ++ L+    +F   V+
Sbjct:  269 EEGTRFLLQHESTGKLTWDIVMMILIIFSSFVNPLKIGFDITSRGALLVIEVLVDFSFIFHIGLTFRTTVMDTETKETITDVREISARRYLKGWFVLDVASSLPVALIAHTVDVTGQENFFYM--LKLLRTLKLHQLSVISTAVLQRFEDRDFNPSMFRIYIFVFTFVLVVHFIACGYWFVSRTTDPEFEGL----WVPEQEYLDAALYKKYTRALYFSLVITYGNDL--KPENDAEYVFSNICLTLALLTNAVIIGSATNLLSNMDAGAVAKKTQMDGINGYMRFRKVPKGLQKRIRTFYEYLWDSGQDSHSSGLFEELPEKLKLQLNIALKKRLIDQVPLFKTFSPSGTIALVQNLIPSIILPGELIVRQGEPATCMFFISRGSVRVTVPETEDCDDEFPEETYIISLGAGSFFGEVALLEEEHVRTANVRAEAFTELQVMHAADFKALAEVFPEFKTAVK 723          
BLAST of NO03G04740 vs. NCBI_GenBank
Match: CEO94725.1 (hypothetical protein PBRA_000510 [Plasmodiophora brassicae])

HSP 1 Score: 174.5 bits (441), Expect = 1.600e-39
Identity = 127/488 (26.02%), Postives = 241/488 (49.39%), Query Frame = 0
Query:  453 IIDPGALWRIRWDILILILIIWTSYSIPYRASFSTRSSGIEAWSELSIDIVFCLDVFLNFITAYY----ESEGILQTNPRAIARRYLRGWFFLDLVSSIPISELSSAL---SPT----LARVFLALKFVKLLRLVRLMRYIDSKEMAMFFTPSMLRLFTTFVLLAWIWHVITCLYWYISISQGLGSSEWTPDADYHHNTDILNYFLCFLWTVQATFSIQTYSPPEKMAEAIFTIFCYLVGIFLNAYVIGSAGSALQSMDQDKNEQRQLMDRIITYMKKR-QLPAYFQRIILDFYNY-MSAKHSEQGILTDLPPAIQLRLSLLLNRELVKNIPLLKQLELNTIIGLMQTLQSTMYMPGEHVFKTGEKGQSLYFVKNGQLEITLDNVNVISN-------------LQKGEMFGQVALTTDSNHDFNVRAAVYSEVLSLPREAYEDLSAESEKFMEL-VEMEAIKQEQFIVKAQKNMQRLAKMNRMGAGVG 914
            +I P   WR+RWD++I++ +++     P   +F           ++ +D VF  D+ LNF TAY     +++G ++  P+ IAR Y + WF++D  ++IP+  +  A+   +PT    L R+F   K  ++L+L R+ + +   +      P ++RL    V L  +WH + C YW +S+  G G+S WTP   +     I  Y   + W++ AT S  +   P+      F+I   + G  L A VIG +  AL +MD    ++R  M  +  ++K + ++    +  I+ +Y+Y +S   S   ++ DL   ++L + + LN++L++ +P+   L    ++ ++ +L+   Y+P E++   GE+   ++FV+ G++EI LD      +             L++G  F    +  +   ++ V+A  +  +LSL RE+   L A   +F E  + M+    E   ++    ++ + +  RM A VG
Sbjct:  344 VIMPTNPWRVRWDLMIMLCVLYFVVMTPVDLAFGDPIDNFA--FDIVLDCVFIFDLVLNFFTAYRVEDGKNKGRMEVRPKEIAREYFKFWFWIDAAATIPLDLIIPAVGVNAPTSFNKLLRLFRGFKLARVLKLSRITKRL-GLDSTYGGNPGLIRLTKYIVFLLVVWHYMGCAYWGVSLIIGFGNSSWTPRPSFQEAPMIDQYLQAYYWSILATTSAGSNIQPDTDVATGFSIAMVIFGCLLYASVIGVSSVALDAMDGGDADKRNKMQALGVFLKNQYEMDPRLKSRIIQYYDYVLSNAASSDDLMHDLHSRLKLEVDMELNQKLIEQVPMFNSLSEQCLLAIISSLEPKTYVPKEYICLKGERSLEMFFVQRGRVEI-LDGAQPKQDSAPGDKSKRSRVFLKEGGYFCDRCMLENLRCEYTVQATSHCLLLSLHRES---LKAILRRFPEFAISMQGCALEDESLRGWTKIRFVVRNVRMLALVG 824          
BLAST of NO03G04740 vs. NCBI_GenBank
Match: ETI46985.1 (hypothetical protein F443_08693 [Phytophthora parasitica P1569] >ETK86926.1 hypothetical protein L915_08522 [Phytophthora parasitica] >ETL40340.1 hypothetical protein L916_08452 [Phytophthora parasitica] >ETL93492.1 hypothetical protein L917_08347 [Phytophthora parasitica] >ETM46753.1 hypothetical protein L914_08402 [Phytophthora parasitica] >ETO75706.1 hypothetical protein F444_08744 [Phytophthora parasitica P1976] >ETP16793.1 hypothetical protein F441_08663 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 174.1 bits (440), Expect = 2.100e-39
Identity = 141/517 (27.27%), Postives = 253/517 (48.94%), Query Frame = 0
Query:  409 RVDAKSSLSETESLVNSYVELVCEDLRTSEKRKMLAQDQEGGTWIIDPGALWRIRWDILILILIIWTSYSIPYRASFSTRSSGIEAWSELSIDIVFCLDVFLNFITAYYE---SEGILQTNPRAIARRYLRGWFFLDLVSSIPISELSSALSPTLARVFLALKFVKLLRLVR-----LMRYIDSKEMAMFFTPSMLRLFTTFVLLAWIWHVITCLYWYISISQGLGSSEWTPDADYHHNTDIL--NYFLCFLWTVQATFS--IQTYSPPEKMAEAIFTIFCYLVGIFLNAYVIGSAGSALQSMDQDKNEQRQLMDRIITYMKKRQLPAYFQRIILDFYNYMSAKHSE---QGILTDLPPAIQLRLSLLLNRELVKNIPLLKQLELNTIIGLMQTLQSTMYMPGEHVFKTGEKGQSLYFVKNGQLEITLDNVN---VISNLQKGEMFGQVALTTDSNHDFNVRAAVYSEVLSLPREAYEDLSAESEKFMELVEMEAIKQEQFIVKAQKNMQRLAKMNR 908
            ++D + +    E + +  + L    L  S+KRK          + +   + +R  WD ++   I +     P +  F  +SSG+    ++ +D+++ +++ LNF T+Y +    E I + +   I R YL+ WF +D VSS P     S+L  T   +    K +K+ R+ +     L+R I S  +     PSMLR+    V+     H+I C Y+YIS +Q + ++ W P  D   N+D L   Y   F + +  T +  +   +P EK    +FT     VGI +NA +IGSA + L ++D+++  ++  MD I  Y++ +++P   Q  I  +Y+Y  +   +   + +  DLP  ++L L L L+ E V+ +PL + L    ++ ++Q L   + MPGE +   GE  +  YF+K GQ+ + +  V     + NL +G  FG+ +L T       V+A    E++ L +E +E +      F   V     +  +  ++  +N+Q++ KMNR
Sbjct:  292 KLDDERTARVAELVDSEVMVLNTSQLAQSQKRK-------AHQYTLSIHSTFRQWWDFVLTASIAYVIVMTPIKVGFDVQSSGLNYALDVVVDVIYLIEMVLNFFTSYEDDATGEEIKELD--KIRRNYLQSWFLVDAVSSFP-----SSLVGTTNGLLTMSKILKVARVAKISDSGLVRTI-SGHIDRSMNPSMLRMLKLTVIFLVSQHLIACTYYYISFNQSVDTT-WAPTHDI-RNSDSLGQQYVDAFYFAIMVTTANDVNPITPIEK----LFTSVMLFVGIVINASIIGSAANLLANLDKEEIARKNHMDSINDYLRFKKVPLVLQNKIRRYYDYAWSTRLQDPTENLFADLPDRLKLLLKLNLHSEFVRKVPLFRALSHAGVVAVIQCLVPIVAMPGEVIIVYGEVAREFYFIKTGQVSLCVPAVEESIPLGNLGEGSFFGETSLLTGEPTTAEVKAERMCELMYLSKEDFETIVDRFPTFFLAVR----RISESRLQTAQNIQKMTKMNR 783          
The following BLAST results are available for this feature:
BLAST of NO03G04740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CEO99113.12.100e-5529.82hypothetical protein PBRA_001018 [Plasmodiophora b... [more]
CEO99112.17.300e-4828.15hypothetical protein PBRA_001017 [Plasmodiophora b... [more]
XP_009520672.12.300e-4126.90hypothetical protein PHYSODRAFT_479009 [Phytophtho... [more]
XP_008879211.12.300e-4125.05hypothetical protein H310_13476 [Aphanomyces invad... [more]
XP_009835599.14.300e-4025.00hypothetical protein H257_10682 [Aphanomyces astac... [more]
OQR89617.15.600e-4023.96Voltage-gated Ion Channel (VIC) Superfamily [Thrau... [more]
WP_088245142.17.300e-4025.22cyclic nucleotide-binding protein [Chlamydiales ba... [more]
CBN74810.11.200e-3928.29conserved unknown protein [Ectocarpus siliculosus][more]
CEO94725.11.600e-3926.02hypothetical protein PBRA_000510 [Plasmodiophora b... [more]
ETI46985.12.100e-3927.27hypothetical protein F443_08693 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005409NSK005409Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G04740.1NO03G04740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|13810gene_1679Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G04740.1NO03G04740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G04740 ID=NO03G04740|Name=NO03G04740|organism=Nannochloropsis oceanica|type=gene|length=3209bp
CTTTTTTCATTTCTCCTTTTCCGATCATCCTCCCTTCCAAACAAGGCTAG
CAGTAGCCGCAGGCTAAGCCCAAGCGACATGGATGGGCGGCAGTCCCCCG
ATTCTCTTCCTTCCCACTCATCCTCGACACCACCGCGTCCACCAACGTCA
CGACAACATTACGAGGAGATTGGCCAACAGCGCCGCTCCTCGAGACAGCC
GCCCATGGGAATGATGCCCATTCAAGAAAGCTCTTCCGAGAATTTATTGT
CATGCGGTGCCAGTACCGATGAAATACAAGCCAGTGCTTCTGCAAATCAG
CATAGGGCATCCTCACAGCCGCCACCTCCGGCTTTTGCCGGCATTCTACT
AGGAGGAGGTGCAGGGGTTACGTTGGGAGATAAGGCTGTGGTGATCCCTG
CCGATGCCACACTCTCAAGGAGCAAGCAAACAATTCGGGAAGCCCGCCGG
AAGATGATTGGCGTTGCCAAAATTTCCATGCATCTCAGCGTGCCCACGAA
AGCCGGCGAGGAGGCAGCAGGTGAGGGTGCTTCTACCGACGAGACTTCCT
TGCCTTCTGGGAAGCCTGGAGGGGATGGGAGCGGTGCAATCAGCATTGAC
GACAGCGTTGGAGATAGTGAGCGTGTAATCAGTCCTATGAGCACCCCCAT
CCATATCGGGAATTGCGTGGTGGGCCAGACTATCATTCCCCCAAGCGTCA
CCACCACCACCGGCAGCACGCTGGTTATGAAACGCCAAAGTATGGTTGGC
TCCATACGCGAGTCGTCCTTAAAGGAAAACGGCCCCAACCCCGCATTAAG
TAAACCATCTCAGTCATCACTTCCTCAATCATCAGCCCCCAAACCACCAA
CGCAACCACCAAGCGCCCTTCCTGCTCGCTCCACCTTCGCCAGGTTGGCT
CAAATGGCCGTCGTGGCCAATGCCAGCGATCCCGATGCCACCAAAGCACC
CTCCTCTCCCACAGGTCCAGGCCGGAATTCTATGGCTTTTTCTTCAACTA
TCATGCCGATGGCGGCGGCGTCGGCTCGGAGGAAATCAAGCATCGCTGGC
GCGGGCCCGTCACCATTGGGATTTTCAAGCGCCGGCAAGGCACCGGATGT
CGCCGCTGGAAACCGACGAACCTCGACGACAGCAGCGGGAGCTCGACGGA
CATCTCTTATCACCCCTCTTCCACTACCTCTTCAACGAGCTTCAGCAATC
AAACAGAAGTTCAAAGTCACAGACGAGGTCCTAAGGCAAATTAAGACCAA
GAACCGCGCCACCACACAACGTAGCCAGGCCTGGTCTCCCCGGACATGGC
AGCGAGTCGACGCCAAAAGCAGTTTGAGCGAGACCGAGAGTTTGGTTAAC
TCGTACGTCGAGCTGGTTTGCGAAGACTTGCGAACGTCCGAAAAGAGGAA
GATGCTTGCGCAAGACCAAGAAGGCGGTACCTGGATCATCGACCCCGGTG
CTCTGTGGCGCATTCGCTGGGACATTCTGATACTGATCTTGATTATATGG
ACAAGCTATAGCATACCTTACCGTGCTTCGTTTTCGACCCGTAGCAGCGG
GATCGAGGCCTGGTCTGAGTTGTCCATCGACATCGTGTTTTGTTTGGACG
TGTTTCTTAACTTTATCACGGCTTACTATGAGTCGGAAGGCATTTTGCAA
ACGAATCCACGGGCCATTGCGCGTCGTTATTTGCGGGGTTGGTTCTTCCT
TGACCTTGTGTCCTCGATCCCAATTAGTGAGCTCTCATCTGCATTATCTC
CCACATTGGCCCGCGTCTTCCTCGCTCTCAAGTTCGTCAAGCTTTTGCGT
TTAGTCCGACTCATGCGCTACATTGATTCGAAGGAGATGGCCATGTTCTT
TACGCCATCCATGCTTCGGCTCTTTACTACTTTTGTGCTTTTAGCTTGGA
TCTGGCATGTAATCACATGTCTGTACTGGTACATTTCCATCAGCCAGGGC
CTGGGGAGCTCTGAGTGGACCCCCGACGCTGATTACCATCACAACACGGA
CATCCTCAACTACTTCCTTTGTTTTCTTTGGACAGTACAGGCGACTTTTT
CCATCCAAACCTATAGTCCGCCAGAGAAGATGGCCGAGGCTATTTTTACA
ATTTTTTGTTATTTGGTAGGGATTTTCTTGAATGCCTATGTGATTGGTAG
CGCGGGCTCCGCGCTTCAGAGCATGGACCAAGACAAGAACGAGCAGCGCC
AGCTGATGGACCGCATTATAACATACATGAAGAAGCGTCAGCTTCCCGCG
TATTTTCAACGGATTATTTTGGATTTTTATAATTATATGAGTGCGAAGCA
TTCTGAGCAAGGCATCTTGACGGACCTGCCGCCCGCCATTCAGTTGCGCC
TTTCTCTATTGCTTAATCGCGAGCTTGTCAAAAACATTCCCTTGCTGAAG
CAGCTGGAGCTGAACACGATCATCGGTCTGATGCAAACACTGCAGTCAAC
AATGTACATGCCGGGGGAGCACGTCTTCAAGACTGGAGAGAAGGGCCAGT
CCCTCTACTTTGTTAAAAATGGGCAGCTGGAGATCACCTTGGACAACGTC
AATGTGATAAGgtgggtgctttacggagggtggtgtggctggatatgcct
tgttcatatgtttcttcttccctgtacaattttatgcaagtttgaggctg
cccacctccattccgctgtccatatctaagacctgttggaacaggagacg
tattctttcaagtgaacttacctatccggcactttccctttccctccatc
cctccctctcctagCAATCTGCAAAAAGGTGAAATGTTTGGGCAAGTCGC
CTTGACGACCGACAGCAACCACGACTTCAATGTCCGCGCCGCTGTATATT
CCGAAGTTCTCTCCCTCCCTCGAGAGGCCTACGAGGACCTGAGTGCCGAG
AGCGAGAAATTTATGGAGCTCGTCGAGATGGAGGCGATCAAGCAAGAGCA
GTTCATTGTCAAGGCCCAGAAGAACATGCAGCGGCTGGCGAAGATGAATC
GGATGGGTGCCGGGGTAGGGAGAGAGGGAGCAAGGAATGTCGAAGCGGGG
GGAGGAGGAGTGGGAGGAGGAGGGGGGAGAGGGAAGAGGGCCGGGAACAA
CGGGGATGGGCCCAATGTTCGGGAATCAATTCAGAAAACCAAGACGATAA
GCAGCGTGGTGGGTATGTTCCTCAAAAATGGTAGCAGCAAGGTAACGCCA
AAGAGATGA
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protein sequence of NO03G04740.1

>NO03G04740.1-protein ID=NO03G04740.1-protein|Name=NO03G04740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=976bp
MDGRQSPDSLPSHSSSTPPRPPTSRQHYEEIGQQRRSSRQPPMGMMPIQE
SSSENLLSCGASTDEIQASASANQHRASSQPPPPAFAGILLGGGAGVTLG
DKAVVIPADATLSRSKQTIREARRKMIGVAKISMHLSVPTKAGEEAAGEG
ASTDETSLPSGKPGGDGSGAISIDDSVGDSERVISPMSTPIHIGNCVVGQ
TIIPPSVTTTTGSTLVMKRQSMVGSIRESSLKENGPNPALSKPSQSSLPQ
SSAPKPPTQPPSALPARSTFARLAQMAVVANASDPDATKAPSSPTGPGRN
SMAFSSTIMPMAAASARRKSSIAGAGPSPLGFSSAGKAPDVAAGNRRTST
TAAGARRTSLITPLPLPLQRASAIKQKFKVTDEVLRQIKTKNRATTQRSQ
AWSPRTWQRVDAKSSLSETESLVNSYVELVCEDLRTSEKRKMLAQDQEGG
TWIIDPGALWRIRWDILILILIIWTSYSIPYRASFSTRSSGIEAWSELSI
DIVFCLDVFLNFITAYYESEGILQTNPRAIARRYLRGWFFLDLVSSIPIS
ELSSALSPTLARVFLALKFVKLLRLVRLMRYIDSKEMAMFFTPSMLRLFT
TFVLLAWIWHVITCLYWYISISQGLGSSEWTPDADYHHNTDILNYFLCFL
WTVQATFSIQTYSPPEKMAEAIFTIFCYLVGIFLNAYVIGSAGSALQSMD
QDKNEQRQLMDRIITYMKKRQLPAYFQRIILDFYNYMSAKHSEQGILTDL
PPAIQLRLSLLLNRELVKNIPLLKQLELNTIIGLMQTLQSTMYMPGEHVF
KTGEKGQSLYFVKNGQLEITLDNVNVISNLQKGEMFGQVALTTDSNHDFN
VRAAVYSEVLSLPREAYEDLSAESEKFMELVEMEAIKQEQFIVKAQKNMQ
RLAKMNRMGAGVGREGARNVEAGGGGVGGGGGRGKRAGNNGDGPNVRESI
QKTKTISSVVGMFLKNGSSKVTPKR*
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Synonyms
Publications