NO03G04680, NO03G04680 (gene) Nannochloropsis oceanica

Overview
NameNO03G04680
Unique NameNO03G04680
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length789
Alignment locationchr3:1336666..1337454 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1336666..1337454 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO03G04680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL066nonsL066Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR048ngnoR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G04680.1NO03G04680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G04680.1NO03G04680.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G04680 ID=NO03G04680|Name=NO03G04680|organism=Nannochloropsis oceanica|type=gene|length=789bp
ATGGTCGTAGCGGCGTCGAGTGATAAGGAGGGCATGATCACCATGATGAT
GGATGATGAGATGTTGAATCTATGTGCCGACTCTGCCCCGCTGATTTCCT
ACACACATATCATGCGGCGTATGATAGGACCTGTGACATGGAATAATGTG
GCTCAGGAGGAGACGCCCAAAGACGGTATTGCTCAGATCTATGGTGGCTT
GTTAAGTGCGTGTGGCGGAACTTCCCCGGCTCAATGTACAAACCTGACTG
ATTACCGGTGCGATGGAAATACCTATCTAAGCACCAGCGGAGGAAACACC
AGCTGGTCTGAGTGCGCAAGATTTTGTGACGATAATATCGGCACCACTAT
AGGCTATGGTCAATTTGACAGCACCCATAGCGTATGCTACTGTGGAGGCA
ATACTTCGTGCCCTCTTTTCACACCTGATCCTGGCTTCATCCAATTCATG
TACAATAGCGGTGCGGAAGACTGTCCAACTTTGACAGCGTCGCCCACACA
GCAGCCTTCTACACAGCCCTCCAACAGCCCCTCTGGCGCTACTGGTGCTC
CCACCTCCTATCCTATCTTTGCCCCGCCGCCGCCCGACGCACCTGTCGAG
ATCCTGGGGCAAGGATTTGTGTGCGGGCCAGAGGTCACCCTTGTCAGTAC
ACGTCATGCCATGGCAGCATCAGGGGCCGATGAGGAGGGGACGGAGCGAG
AGAAGCAGGCAGGAGAGGAGCTCTTATCGGAAATTGGCCGGGACTATCAT
CGATGCAAGACTTGTCAAAATGCTGCCCTGAGGGCTTAA
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protein sequence of NO03G04680.1

>NO03G04680.1-protein ID=NO03G04680.1-protein|Name=NO03G04680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=263bp
MVVAASSDKEGMITMMMDDEMLNLCADSAPLISYTHIMRRMIGPVTWNNV
AQEETPKDGIAQIYGGLLSACGGTSPAQCTNLTDYRCDGNTYLSTSGGNT
SWSECARFCDDNIGTTIGYGQFDSTHSVCYCGGNTSCPLFTPDPGFIQFM
YNSGAEDCPTLTASPTQQPSTQPSNSPSGATGAPTSYPIFAPPPPDAPVE
ILGQGFVCGPEVTLVSTRHAMAASGADEEGTEREKQAGEELLSEIGRDYH
RCKTCQNAALRA*
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Synonyms
Publications