NO03G04660, NO03G04660 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G04660 vs. NCBI_GenBank
Match: EWM29895.1 (2fe-2s iron-sulfur cluster binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 301.2 bits (770), Expect = 2.100e-78 Identity = 148/183 (80.87%), Postives = 160/183 (87.43%), Query Frame = 0 Query: 1 MASTLLAKTMLRQAVVVGARGPAVAARAAG--VGSTGSS-RGLSWVKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMHDIELESGCGGGGAEQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWIDFVEDKQPATDKENELLQEHWVEEASANSRLGCQVTLTKSLDGIQVFIPDGPPADCP 181 MAS LLAK LRQA+ VGA A R +G + STGSS R L+ VKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMHDIELESGCGGGGA QQKKHSERWTEDLFGRGPCCHFCHVKIPSPWI+ + DKQPAT+KE+ELL+EHW EEA+ NSRLGCQV LTK+LDG+QVFIPDGPPADCP Sbjct: 1 MASALLAKKALRQALAVGAHSQATVGRRSGAVINSTGSSRRTLASVKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMHDIELESGCGGGGAVQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWINTIHDKQPATEKEHELLEEHWQEEATDNSRLGCQVMLTKNLDGMQVFIPDGPPADCP 183
BLAST of NO03G04660 vs. NCBI_GenBank
Match: CBJ30843.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 131.3 bits (329), Expect = 2.900e-27 Identity = 74/171 (43.27%), Postives = 100/171 (58.48%), Query Frame = 0 Query: 10 MLRQAVVVGARGPAVAARAAGVGSTGSS----RGLSWVKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMHDIELESGCGGGGAEQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWIDFVEDKQPATDKENELLQEHWVEEASANSRLGCQVTLTKSLDGIQVFIPDGPP 177 MLR A+ G + RAA G+ S+ R LS +++ V VTF++ EG R TV GQ++ +VA+ H+I L+ C G Q ++SE WTEDLFG+GP C CHV + +F E +P D E LL+ A +SRLGCQ+ L++ LDGI VFIPDGPP Sbjct: 1 MLRTALQTGV--GCLPRRAASGGAVSSAQAGRRALSSLQEALVKVTFVDAEGDRETVSALPGQNIFEVAEKHEIALDGPCRGKAGAVQSRNSESWTEDLFGQGPVCASCHVMLTK---EFTEKIEPPLDSEISLLERKGELYAPGSSRLGCQIKLSRDLDGITVFIPDGPP 166
BLAST of NO03G04660 vs. NCBI_GenBank
Match: OQS06186.1 (hypothetical protein THRCLA_01755 [Thraustotheca clavata]) HSP 1 Score: 106.7 bits (265), Expect = 7.700e-20 Identity = 55/139 (39.57%), Postives = 81/139 (58.27%), Query Frame = 0 Query: 42 WVKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMH--DIELESGCGGGGAEQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWIDFVEDKQPATDKENELLQEHWVEEASANSRLGCQVTLTKSLDGIQVFIPDGPPAD 179 +V D V+VT ++ EG R V GRVGQ+L D Q+ DI + GGGGA + +TE LFG GP HV + + W + + PA+D+E +L++ E+ + NSRLG ++ LTK LDG+ V +P+ PP + Sbjct: 26 FVHDRLVSVTLLDWEGSRHIVQGRVGQTLFDACQLSGVDIVKDDSLGGGGATYSAIRTPEFTESLFGEGPASPLSHVVVSNEWFNKL---PPASDRELRILEDVPEEDLTKNSRLGTEIILTKDLDGLVVAVPEAPPVE 161
BLAST of NO03G04660 vs. NCBI_GenBank
Match: XP_008603877.1 (hypothetical protein SDRG_00189 [Saprolegnia diclina VS20] >EQC42454.1 hypothetical protein SDRG_00189 [Saprolegnia diclina VS20]) HSP 1 Score: 102.8 bits (255), Expect = 1.100e-18 Identity = 53/140 (37.86%), Postives = 82/140 (58.57%), Query Frame = 0 Query: 42 WVKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMH--DIELESGCGGGGAEQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWIDFVEDKQPA-TDKENELLQEHWVEEASANSRLGCQVTLTKSLDGIQVFIPDGPPAD 179 +V+D V VT +++EG R + GRVGQ+L + Q+ DI + GGGG+ + +TE LFG GP HV + + W+ K PA T++E +L++ E+ + NSRLG ++ LTK LDG+ V +P+ PP + Sbjct: 26 FVRDHLVAVTLLDYEGSRHIIQGRVGQTLFEACQLSGLDIVKDDSLGGGGSAYSAVRTPEFTESLFGEGPSSPLSHVVVSNEWV----HKLPAPTEREARILEDVPEEDLTKNSRLGTEIILTKDLDGLVVAVPEAPPVE 161
BLAST of NO03G04660 vs. NCBI_GenBank
Match: XP_012205775.1 (hypothetical protein SPRG_11382 [Saprolegnia parasitica CBS 223.65] >KDO23459.1 hypothetical protein SPRG_11382 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 100.9 bits (250), Expect = 4.300e-18 Identity = 52/140 (37.14%), Postives = 81/140 (57.86%), Query Frame = 0 Query: 42 WVKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMH--DIELESGCGGGGAEQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWIDFVEDKQPA-TDKENELLQEHWVEEASANSRLGCQVTLTKSLDGIQVFIPDGPPAD 179 +V+D V VT +++EG R + GRVGQ+L + Q+ DI + GGGGA + +TE LFG GP HV + + W+ K P +++E +L++ E+ + NSRLG ++ LTK LDG+ V +P+ PP + Sbjct: 26 FVRDHLVAVTLLDYEGSRHIIQGRVGQTLFEACQLSGLDIVKDDSLGGGGATYSAVRTPEFTESLFGEGPSSPLSHVVVSNEWV----HKLPVPSEREARILEDVPEEDLTKNSRLGTEIILTKDLDGLVVAVPEAPPVE 161
BLAST of NO03G04660 vs. NCBI_GenBank
Match: OQR93588.1 (hypothetical protein ACHHYP_02409 [Achlya hypogyna]) HSP 1 Score: 98.6 bits (244), Expect = 2.100e-17 Identity = 60/159 (37.74%), Postives = 90/159 (56.60%), Query Frame = 0 Query: 24 VAARAAGVGS-TGSSRGLSWVKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMHDIEL--ESGCGGGGAEQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWIDFVEDKQP-ATDKENELLQEHWVEEASANSRLGCQVTLTKSLDGIQVFIPDGPPAD 179 VAA A GS S +V+D V+VT ++ EG R V GRVGQ+L + Q+ ++L + GGGGA S +TE+LFG GP HV I + W+ K P +++E +L++ E+ + NSRLG ++ LTK L+G+ V +P+ PP + Sbjct: 6 VAASARRFGSHAPKSVPEQFVRDHLVSVTLLDWEGSRHLVQGRVGQTLFEACQLAGLDLVKDDSLGGGGAMYSAVRSPEFTENLFGEGPSSPLSHVVISNEWV----HKLPLPSEREARILEDVPEEDLTKNSRLGTEIILTKDLEGLVVAVPEAPPIE 160
BLAST of NO03G04660 vs. NCBI_GenBank
Match: XP_008870855.1 (hypothetical protein H310_07275 [Aphanomyces invadans] >ETW00720.1 hypothetical protein H310_07275 [Aphanomyces invadans]) HSP 1 Score: 97.4 bits (241), Expect = 4.700e-17 Identity = 52/139 (37.41%), Postives = 83/139 (59.71%), Query Frame = 0 Query: 42 WVKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMH--DIELESGCGGGGAEQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWIDFVEDKQPATDKENELLQEHWVEEASANSRLGCQVTLTKSLDGIQVFIPDGPPAD 179 +V+D V+VT ++ EG R V GRVGQSL + +++ DI + GGGGA + +TE+LFG GP HV + + W+D + QP T++E +LQ+ E+ + NSRL ++ L+K L+G+ V +P+ P + Sbjct: 25 FVRDQIVSVTLLDWEGSRHIVQGRVGQSLFEASRLAGLDIIQDDSLGGGGASYSAVRTPEFTENLFGEGPSSFLSHVVVSNEWVDKL--PQP-TEREVRILQDVPEEDWTENSRLATEIILSKDLEGLVVAVPEAQPIE 160
BLAST of NO03G04660 vs. NCBI_GenBank
Match: XP_009826239.1 (hypothetical protein H257_03721 [Aphanomyces astaci] >ETV84547.1 hypothetical protein H257_03721 [Aphanomyces astaci]) HSP 1 Score: 97.1 bits (240), Expect = 6.100e-17 Identity = 52/140 (37.14%), Postives = 82/140 (58.57%), Query Frame = 0 Query: 42 WVKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMH--DIELESGCGGGGAEQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWIDFVEDKQP-ATDKENELLQEHWVEEASANSRLGCQVTLTKSLDGIQVFIPDGPPAD 179 +V+D V+VT ++ EG R V GRVGQSL + +++ DI + GGGGA + +TE+LFG GP HV + + W+ DK P TD+E +L++ ++ + NSRL ++ LTK L+G+ V +P+ P + Sbjct: 25 FVRDQIVSVTLLDWEGSRHVVQGRVGQSLFEASRLSGLDIIQDDTLGGGGAAYSAIRTPEFTENLFGEGPASFLSHVVVSNEWV----DKLPLPTDREVRILEDVPEDDWTKNSRLATEIILTKDLEGLVVAVPEAQPIE 160
BLAST of NO03G04660 vs. NCBI_GenBank
Match: XP_012893672.1 (uncharacterized protein [Blastocystis hominis] >CBK19624.2 unnamed protein product [Blastocystis hominis]) HSP 1 Score: 95.9 bits (237), Expect = 1.400e-16 Identity = 53/142 (37.32%), Postives = 82/142 (57.75%), Query Frame = 0 Query: 38 RGLSW---VKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMHDIELESGCGGGGAEQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWIDFVEDKQPATDKENELLQEHWVEEASANSRLGCQVTLTKSLDGIQVFIPDGPP 177 R +SW V + T+++TFI +G TV R+G ++LD A+ + + + C G G + K +E WTE+ FG GP C FCHV +PS + V +K T +E E +++ + + + SRL CQV +TK ++G FIP P Sbjct: 21 RSISWTSAVAENTIDLTFITPKGESKTVKARIGDTVLDTAEAYGLPICGDCHGAGLPRAVKRTENWTEETFGEGPSCAFCHV-VPSLELSKVLEK--PTAQELEFIEKIPIGK-TPRSRLACQVPVTKEMNGGVFFIPHHVP 158
BLAST of NO03G04660 vs. NCBI_GenBank
Match: AFL03354.1 (putative 2Fe-2S ferredoxin [Blastocystis sp. ATCC 50177/Nand II] >OAO17976.1 Ferredoxin [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 95.9 bits (237), Expect = 1.400e-16 Identity = 52/144 (36.11%), Postives = 75/144 (52.08%), Query Frame = 0 Query: 36 SSRGLSW---VKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMHDIELESGCGGGGAEQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWIDFVEDKQPATDKENELLQEHWVEEASANSRLGCQVTLTKSLDGIQVFIPDGPP 177 ++R +SW D T+++TFI EG V R+G +LL+ A+ + + L C G G + K +E WTE+ FG GP C FCHV + + V P E E E + SRL CQ+++TK ++G VFIP P Sbjct: 19 AARFISWTGKAADNTIDITFITPEGESKPVKARIGDTLLETAEAYKLPLCGDCHGNGLPRAVKRTEGWTEETFGEGPSCSFCHVVLSRELSEVV----PKPCAEEETFIEKIPIGKTERSRLACQISVTKEMNGGVVFIPHHVP 158 The following BLAST results are available for this feature:
BLAST of NO03G04660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G04660 ID=NO03G04660|Name=NO03G04660|organism=Nannochloropsis oceanica|type=gene|length=1460bpback to top protein sequence of NO03G04660.1 >NO03G04660.1-protein ID=NO03G04660.1-protein|Name=NO03G04660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=181bpback to top Synonyms
Publications
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