NO03G04360, NO03G04360 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G04360 vs. NCBI_GenBank
Match: EWM29788.1 (60s ribosomal protein l11 [Nannochloropsis gaditana]) HSP 1 Score: 349.4 bits (895), Expect = 6.600e-93 Identity = 170/173 (98.27%), Postives = 171/173 (98.84%), Query Frame = 0 Query: 1 MADKKNNPMRELVVEKLILNCCVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGIRRNEKISVHVTLRGDKANEILDRGLKVKEYELKRKNFSAGGNFGFGITEHIDLGLKYDPSTGIYGMDFYVVLGRKGFRVGRRKLKVGRVGAPHRVTQKDAIDWFQQKFEGIVLG 174 MADKKNNPMRELVVEKLILNCCVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGIRRNEKISVHVTLRGDKANEILDRGLKVKEYELK+KNFS GNFGFGITEHIDLGLKYDPSTGIYGMDFYVVLGRKGFRVGRRKLKVGRVGAPHRVTQKDAIDWFQQKFEGIVLG Sbjct: 53 MADKKNNPMRELVVEKLILNCCVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGIRRNEKISVHVTLRGDKANEILDRGLKVKEYELKKKNFSQNGNFGFGITEHIDLGLKYDPSTGIYGMDFYVVLGRKGFRVGRRKLKVGRVGAPHRVTQKDAIDWFQQKFEGIVLG 225
BLAST of NO03G04360 vs. NCBI_GenBank
Match: XP_008912007.1 (60S ribosomal protein L11 [Phytophthora parasitica INRA-310] >ETI37223.1 60S ribosomal protein L11 [Phytophthora parasitica P1569] >ETK77445.1 60S ribosomal protein L11 [Phytophthora parasitica] >ETL30892.1 60S ribosomal protein L11 [Phytophthora parasitica] >ETL84131.1 60S ribosomal protein L11 [Phytophthora parasitica] >ETM37312.1 60S ribosomal protein L11 [Phytophthora parasitica] >ETN02792.1 60S ribosomal protein L11 [Phytophthora parasitica INRA-310] >ETO65966.1 60S ribosomal protein L11 [Phytophthora parasitica P1976] >ETP07076.1 60S ribosomal protein L11 [Phytophthora parasitica CJ01A1] >ETP35169.1 60S ribosomal protein L11 [Phytophthora parasitica P10297] >KUF86116.1 60S ribosomal protein L11-2 [Phytophthora nicotianae]) HSP 1 Score: 282.0 bits (720), Expect = 1.300e-72 Identity = 133/170 (78.24%), Postives = 151/170 (88.82%), Query Frame = 0 Query: 3 DKKNNPMRELVVEKLILNCCVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGIRRNEKISVHVTLRGDKANEILDRGLKVKEYELKRKNFSAGGNFGFGITEHIDLGLKYDPSTGIYGMDFYVVLGRKGFRVGRRKLKVGRVGAPHRVTQKDAIDWFQQKFEGIVL 173 DK NNPMR++ V+KL++NCCVGESGD+LTRAA+VLEQL+GQ PVYSKARYTVR+FGIRRNEKIS HVT+RG+ A EILDRGLKVKEYEL RKNFS GNFGFGI EHIDLG+KYDPSTGIYGMDF+VVL R G RV RRK++ RVG PHR+T+ DAI+WFQ KFEGIVL Sbjct: 4 DKSNNPMRDIHVDKLVINCCVGESGDKLTRAARVLEQLTGQKPVYSKARYTVRTFGIRRNEKISCHVTIRGELAQEILDRGLKVKEYELLRKNFSETGNFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLKRPGARVARRKMQQSRVGHPHRLTKDDAINWFQTKFEGIVL 173
BLAST of NO03G04360 vs. NCBI_GenBank
Match: CBJ30107.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 281.2 bits (718), Expect = 2.200e-72 Identity = 134/173 (77.46%), Postives = 152/173 (87.86%), Query Frame = 0 Query: 1 MADKKNNPMRELVVEKLILNCCVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGIRRNEKISVHVTLRGDKANEILDRGLKVKEYELKRKNFSAGGNFGFGITEHIDLGLKYDPSTGIYGMDFYVVLGRKGFRVGRRKLKVGRVGAPHRVTQKDAIDWFQQKFEGIVLG 174 MA+ K NPMR+L V+KL+LNC VGESGDRLTRAAKVLEQL+GQ+PVYSKARYTVRSFGIRRNEKI+ HVT+RGDKA EIL+RGLKVKEYELKRKNFS G+FGFGI EHIDLGLKYDPSTGIYGMDF+VVL R G+RV +RK K ++G H+VT+ DA+ WFQ KFEGIV G Sbjct: 1 MAEIKTNPMRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFFVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIVTG 173
BLAST of NO03G04360 vs. NCBI_GenBank
Match: OLL23214.1 (60S ribosomal protein L11 [Neolecta irregularis DAH-3]) HSP 1 Score: 280.4 bits (716), Expect = 3.800e-72 Identity = 130/169 (76.92%), Postives = 149/169 (88.17%), Query Frame = 0 Query: 4 KKNNPMRELVVEKLILNCCVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGIRRNEKISVHVTLRGDKANEILDRGLKVKEYELKRKNFSAGGNFGFGITEHIDLGLKYDPSTGIYGMDFYVVLGRKGFRVGRRKLKVGRVGAPHRVTQKDAIDWFQQKFEGIVL 173 K NNPMREL +EKL+LN CVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVR+FGIRRNEKI+VHVT+RG KA EIL+RGLKVKEYEL+++NFS GNFGFGI EHIDL +KYDPS GIYGMDFYVV+GRKG+RVGRRK RVGAPHRV + + + WF+ K++ +VL Sbjct: 10 KLNNPMRELKIEKLVLNICVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGIQEHIDLNIKYDPSIGIYGMDFYVVMGRKGYRVGRRKRATSRVGAPHRVNKNETVSWFKNKYDAVVL 178
BLAST of NO03G04360 vs. NCBI_GenBank
Match: OWZ12395.1 (60S ribosomal protein L11 [Phytophthora megakarya]) HSP 1 Score: 280.4 bits (716), Expect = 3.800e-72 Identity = 133/170 (78.24%), Postives = 150/170 (88.24%), Query Frame = 0 Query: 3 DKKNNPMRELVVEKLILNCCVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGIRRNEKISVHVTLRGDKANEILDRGLKVKEYELKRKNFSAGGNFGFGITEHIDLGLKYDPSTGIYGMDFYVVLGRKGFRVGRRKLKVGRVGAPHRVTQKDAIDWFQQKFEGIVL 173 DK NN MRE+ V+KL++NCCVGESGD+LTRAA+VLEQL+GQ PVYSKARYTVR+FGIRRNEKIS HVT+RG+ A EILDRGLKVKEYEL RKNFS GNFGFGI EHIDLG+KYDPSTGIYGMDF+VVL R G RV RRK++ RVG PHR+T+ DAI+WFQ KFEGIVL Sbjct: 10 DKSNNAMREIHVDKLVINCCVGESGDKLTRAARVLEQLTGQKPVYSKARYTVRTFGIRRNEKISCHVTIRGELAQEILDRGLKVKEYELLRKNFSETGNFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLKRPGARVARRKMQQSRVGHPHRLTKDDAINWFQSKFEGIVL 179
BLAST of NO03G04360 vs. NCBI_GenBank
Match: CCI45988.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 279.3 bits (713), Expect = 8.400e-72 Identity = 131/169 (77.51%), Postives = 150/169 (88.76%), Query Frame = 0 Query: 4 KKNNPMRELVVEKLILNCCVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGIRRNEKISVHVTLRGDKANEILDRGLKVKEYELKRKNFSAGGNFGFGITEHIDLGLKYDPSTGIYGMDFYVVLGRKGFRVGRRKLKVGRVGAPHRVTQKDAIDWFQQKFEGIVL 173 K NN MRE+ V+KL++NCCVGESGD+LTRAA+VLEQL+GQ PVYSKARYTVRSFGIRRNEKIS HVT+RG+ A+EILDRGLKVKEYELKRKNFS GNFGFGI EHIDLG+KYDPSTGIYGMDF+VVL R G RV RK++ R+GAPHR+ + DAI+WFQ K+EGIVL Sbjct: 6 KSNNAMREIKVDKLVINCCVGESGDKLTRAARVLEQLTGQKPVYSKARYTVRSFGIRRNEKISCHVTVRGEMASEILDRGLKVKEYELKRKNFSDTGNFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLSRPGARVSHRKIQQSRIGAPHRLRKDDAINWFQTKYEGIVL 174
BLAST of NO03G04360 vs. NCBI_GenBank
Match: XP_024576123.1 (60s ribosomal protein l11 [Plasmopara halstedii] >CEG39754.1 60s ribosomal protein l11 [Plasmopara halstedii]) HSP 1 Score: 278.9 bits (712), Expect = 1.100e-71 Identity = 133/170 (78.24%), Postives = 149/170 (87.65%), Query Frame = 0 Query: 3 DKKNNPMRELVVEKLILNCCVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGIRRNEKISVHVTLRGDKANEILDRGLKVKEYELKRKNFSAGGNFGFGITEHIDLGLKYDPSTGIYGMDFYVVLGRKGFRVGRRKLKVGRVGAPHRVTQKDAIDWFQQKFEGIVL 173 DK NN MRE+ V+KL++NCCVGESGD+LTRAA+VLEQL+GQ PVYSKARYTVR+FGIRRNEKIS HVT+RG+ A EILDRGLKVKEYEL RKNFS GNFGFGI EHIDLG+KYDPSTGIYGMDFYVVL R G RV RRK++ RVG PHR+T+ DAI WFQ K+EGIVL Sbjct: 4 DKSNNVMREIHVDKLVINCCVGESGDKLTRAARVLEQLTGQKPVYSKARYTVRTFGIRRNEKISCHVTVRGELAQEILDRGLKVKEYELLRKNFSETGNFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLKRPGARVARRKIQQSRVGHPHRLTKDDAIKWFQAKYEGIVL 173
BLAST of NO03G04360 vs. NCBI_GenBank
Match: XP_008868808.1 (60S ribosomal protein L11 [Aphanomyces invadans] >ETW02203.1 60S ribosomal protein L11 [Aphanomyces invadans]) HSP 1 Score: 276.6 bits (706), Expect = 5.400e-71 Identity = 128/172 (74.42%), Postives = 154/172 (89.53%), Query Frame = 0 Query: 1 MADKKNNPMRELVVEKLILNCCVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGIRRNEKISVHVTLRGDKANEILDRGLKVKEYELKRKNFSAGGNFGFGITEHIDLGLKYDPSTGIYGMDFYVVLGRKGFRVGRRKLKVGRVGAPHRVTQKDAIDWFQQKFEGIVL 173 M++ KNN MRE+ VEKL++NCCVGESGD+LTRAA+VLEQL+GQ P+YSKARYTVR+FGIRRNEKIS HVT+RG+KA EILDRGLKVKEYELK++NFS GNFGFGI EHIDLG+KYDPSTGIYGMDF+VVL R G RV RRKL+ RVGAPHR+ ++DA++WF K+EG+++ Sbjct: 1 MSNDKNNVMREIKVEKLVINCCVGESGDKLTRAARVLEQLTGQKPLYSKARYTVRTFGIRRNEKISCHVTVRGEKALEILDRGLKVKEYELKKRNFSDTGNFGFGIEEHIDLGIKYDPSTGIYGMDFFVVLTRAGMRVSRRKLRQTRVGAPHRLRKQDAMNWFTTKYEGLIM 172
BLAST of NO03G04360 vs. NCBI_GenBank
Match: XP_009840198.1 (60S ribosomal protein L11 [Aphanomyces astaci] >ETV70486.1 60S ribosomal protein L11 [Aphanomyces astaci]) HSP 1 Score: 276.2 bits (705), Expect = 7.100e-71 Identity = 128/172 (74.42%), Postives = 154/172 (89.53%), Query Frame = 0 Query: 1 MADKKNNPMRELVVEKLILNCCVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGIRRNEKISVHVTLRGDKANEILDRGLKVKEYELKRKNFSAGGNFGFGITEHIDLGLKYDPSTGIYGMDFYVVLGRKGFRVGRRKLKVGRVGAPHRVTQKDAIDWFQQKFEGIVL 173 M++ KNN MRE+ VEKL++NCCVGESGD+LTRAA+VLEQL+GQ P+YSKARYTVR+FGIRRNEKIS HVT+RG+KA EILDRGLKVKEYELK++NFS GNFGFGI EHIDLG+KYDPSTGIYGMDF+VVL R G RV RRKL+ RVGAPHR+ ++DA++WF K+EG+++ Sbjct: 1 MSNDKNNIMREIKVEKLVINCCVGESGDKLTRAARVLEQLTGQKPLYSKARYTVRTFGIRRNEKISCHVTVRGEKALEILDRGLKVKEYELKKRNFSDTGNFGFGIEEHIDLGIKYDPSTGIYGMDFFVVLTRAGMRVARRKLRQTRVGAPHRLRKQDAMNWFTTKYEGLIM 172
BLAST of NO03G04360 vs. NCBI_GenBank
Match: ACY71254.1 (ribosomal protein L11 [Chrysomela tremula]) HSP 1 Score: 275.8 bits (704), Expect = 9.300e-71 Identity = 129/170 (75.88%), Postives = 148/170 (87.06%), Query Frame = 0 Query: 3 DKKNNPMRELVVEKLILNCCVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGIRRNEKISVHVTLRGDKANEILDRGLKVKEYELKRKNFSAGGNFGFGITEHIDLGLKYDPSTGIYGMDFYVVLGRKGFRVGRRKLKVGRVGAPHRVTQKDAIDWFQQKFEGIVL 173 DK NPMREL + KL LN CVGESGDRLTRAAKVLEQL+GQ PV+SKARYTVRSFGIRRNEKI+VH T+RG KA EIL+RGLKV+EYEL+R NFSA GNFGFGI EHIDLG+KYDPS GIYG+DFYVVLGR GF V R+ K G+VG PHR+T++DA+ WFQQK++GI+L Sbjct: 14 DKSKNPMRELHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSASGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRAKQGKVGFPHRLTKEDAMKWFQQKYDGIIL 183 The following BLAST results are available for this feature:
BLAST of NO03G04360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G04360 ID=NO03G04360|Name=NO03G04360|organism=Nannochloropsis oceanica|type=gene|length=1994bpback to top protein sequence of NO03G04360.1 >NO03G04360.1-protein ID=NO03G04360.1-protein|Name=NO03G04360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=174bpback to top Synonyms
Publications
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