NO03G04300, NO03G04300 (gene) Nannochloropsis oceanica

Overview
NameNO03G04300
Unique NameNO03G04300
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1501
Alignment locationchr3:1242477..1243977 -

Link to JBrowse

Properties
Property NameValue
DescriptionUroporphyrinogen decarboxylase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1242477..1243977 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006779porphyrin-containing compound biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004853uroporphyrinogen decarboxylase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR038071UROD/MetE-like_sf
IPR000257Uroporphyrinogen_deCOase
Homology
BLAST of NO03G04300 vs. NCBI_GenBank
Match: EWM29859.1 (uroporphyrinogen decarboxylase [Nannochloropsis gaditana])

HSP 1 Score: 657.9 bits (1696), Expect = 2.200e-185
Identity = 344/443 (77.65%), Postives = 374/443 (84.42%), Query Frame = 0
Query:    7 SRRHQRGAVLFPF-MLVLGSSLHTALAFVP---------AIPSRAATAAHASSSIPLFASAGDATKIINPDHDILLRVARGEQAHRTPVWLMRQAGRYMAAFREYSEKYPFRQRSETPAMAIELSMQPLEAFGVDGVIMFSDILTPLPALGINFDVITGKGPVIPKRIATALDIENLQPLDDPEKSLPFVGETLRTLKKEVAGRATLLGFVGAPFTLAAYTIEGGSSKSCLKIKKMMMYDPTLLHVYLDKLATAIGDYACYQIENGAQVIQVFESWAHQLSPSQFLKYSKPYADKVTAIIKAKYPNVPIIFFGHGGSSYLELQKDMNADMICLDWQVDMTTARKTLGSKPVSGNVDPTILLGPPEGIVAAVDECIGKAGGSGHILNLGHGVIKTTPEEAVKLFVDTAKSIEVKEGGGVEKGGVVGGEEESLLVRPAALAGAAA 440
            S R Q G++L    +L L + L  ALAF P          I S     +  S+  PLFA + D +KI+NPDHDILLRVARGEQ HRTPVWLMRQAGRYMAAFREYSEKYPFRQRSETP+MAIELSMQPLEAFGVDGVIMFSDILTPLPALGI FDVI+GKGPVIP RIATA+D++N++ LDDP  SLPFVGETLRTLK EVAGRATLLGFVGAPFTLAAYTIEGGSSK+CLK K+MMMYDPTLLHVYLDKLATAIGDYACYQIENGA+VIQVFESWAHQLSPSQFLKYSKPYADKVT I+K ++P VPIIFFGHG SS+LELQ DM ADMICLDWQVDM TAR+TLG+KPVSGNVDPT+LLGPPEGIVAAVDEC+ KAGG GHILNLGHGVIKTTPE+AV+LFVDTAKSIE+K     E G    G   S LVRP ALAGA A
Sbjct:    4 SPRPQGGSLLLAVSVLFLSNGLQAALAFSPILRSAVGHDKIQSFVVQESRWSTLSPLFAGSIDGSKIVNPDHDILLRVARGEQTHRTPVWLMRQAGRYMAAFREYSEKYPFRQRSETPSMAIELSMQPLEAFGVDGVIMFSDILTPLPALGIEFDVISGKGPVIPNRIATAMDVDNVRRLDDPASSLPFVGETLRTLKNEVAGRATLLGFVGAPFTLAAYTIEGGSSKNCLKTKRMMMYDPTLLHVYLDKLATAIGDYACYQIENGAEVIQVFESWAHQLSPSQFLKYSKPYADKVTTIVKERHPEVPIIFFGHGASSFLELQGDMAADMICLDWQVDMATARRTLGAKPVSGNVDPTVLLGPPEGIVAAVDECVRKAGGGGHILNLGHGVIKTTPEDAVRLFVDTAKSIELK-AASRESGS--DGPPPSSLVRP-ALAGAGA 442          
BLAST of NO03G04300 vs. NCBI_GenBank
Match: XP_005842095.1 (plastid Uroporphyrinogen decarboxylase [Guillardia theta CCMP2712] >EKX55115.1 plastid Uroporphyrinogen decarboxylase [Guillardia theta CCMP2712])

HSP 1 Score: 470.3 bits (1209), Expect = 6.500e-129
Identity = 231/365 (63.29%), Postives = 284/365 (77.81%), Query Frame = 0
Query:   42 ATAAHASSSIPLFASAGDATKIINPDHDILLRVARGEQAHRTPVWLMRQAGRYMAAFREYSEKYPFRQRSETPAMAIELSMQPLEAFGVDGVIMFSDILTPLPALGINFDVITGKGPVIPKRIATALDIENLQPLDDPEKSLPFVGETLRTLKKEVAGRATLLGFVGAPFTLAAYTIEGGSSKSCLKIKKMMMYDPTLLHVYLDKLATAIGDYACYQIENGAQVIQVFESWAHQLSPSQFLKYSKPYADKVTAIIKAKYPNVPIIFFGHGGSSYLELQKDMNADMICLDWQVDMTTARKTLGSKPVSGNVDPTILLGPPEGIVAAVDECIGKAGGSGHILNLGHGVIKTTPEEAVKLFVDTAKSI 407
            A A  A++ +   + AG   K+   DHDILLRVARGE+A+R PVWLMRQAGRYM AFREYS+KYPFRQRSETP +AIELS+QP +AFG DGVIMFSDILTPLP++GI FDV+ G GPVI   I +   I++L+P+DDP+ S+PF+ E L++L+KE  G+ TLLGFVG+PFTLAAY++EG + K+C + KKMM   P +LH +LD +A  I  YA +QI+ GAQV+QVFESWAH LSP  FL + KPYADK  ++IK K+PNVPII+F +GGSSYLELQ+DM ADMIC+DW++DM TARKTLG KP+SGNVDP IL+G    I  AV +C+ KA G  HILNLGHGVI+ TPE AV  FVD AK I
Sbjct:    2 AAAWTAAALLSKASRAGLKLKMQASDHDILLRVARGEEANRAPVWLMRQAGRYMKAFREYSDKYPFRQRSETPEIAIELSLQPWKAFGTDGVIMFSDILTPLPSMGIEFDVVKGSGPVIFDPIRSMDQIKSLKPIDDPDASVPFLREILQSLRKETDGKTTLLGFVGSPFTLAAYSVEGKADKNCFQTKKMMYNQPEILHAFLDHIAENIAAYAIHQIDCGAQVLQVFESWAHHLSPEDFLIFGKPYADKAISLIKQKHPNVPIIYFANGGSSYLELQRDMKADMICVDWKIDMATARKTLGDKPISGNVDPLILMGKESKIREAVRDCVHKARGVPHILNLGHGVIQPTPESAVAAFVDEAKKI 366          
BLAST of NO03G04300 vs. NCBI_GenBank
Match: XP_002289084.1 (uroporphyrinogen III decarboxylase [Thalassiosira pseudonana CCMP1335] >EED94520.1 uroporphyrinogen III decarboxylase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 438.0 bits (1125), Expect = 3.600e-119
Identity = 233/387 (60.21%), Postives = 281/387 (72.61%), Query Frame = 0
Query:   27 LHTALAFVPAIPSRAATAAHASSSIPLFASAGDATKIINPDHDILLRVARGEQAHRTPVWLMRQAGRYMAAFREYSEKYPFRQRSETPAMAIELSMQPLEAFGVDGVIMFSDILTPLPALGINFDVITGKGPVIPKRIATALDIENLQPLDDP--EKSLPFVGETLRTLKKEV-AGRATLLGFVGAPFTLAAYTIEGGSSKSCLKIKKMMMYD----PTLLHVYLDKLATAIGDYACYQIENGAQVIQVFESWAHQLSPSQFLKYSKPYADKVTAIIKAKYPNVPIIFFGHGGSSYLELQKDMNADMICLDWQVDMTTARKTLGSK-PVSGNVDPTILLGPPEGIVAAVDECIGKAGGSG-HILNLGHGVIKTTPEEAVKLFVDTAK 405
            L TA+AF PA  SR+ TA H+S+   + ++A    K    D DIL+R A G+Q  RTPVWLMRQAGRYM+AFR+YS+KYPFR+RSETP+MAIELS+Q   A+G+DG+IMFSDILTPLP LGI FDV+ G GPVI   + T  D+  L+ ++    +++LPF+ E L +L KE      +L+GFVGAPFTLAAYTIEG SSK CL  KKMMM D       +  +LDKLA  IG+YAC+QIE GAQVIQVFESWAHQLSP QF  ++KP A K   IIK KYP+VP+I+F +GGSSYLELQKDM  DMI +DW VDM  ARK LG   P+SGN+DPTIL G  E I  AV +CI KAGG G H+LNLGHGV++ TPEEAV   VD  K
Sbjct:   13 LSTAVAFTPATTSRSPTALHSSTEAVVESTANGVNK---GDRDILVRCASGQQVERTPVWLMRQAGRYMSAFRQYSDKYPFRERSETPSMAIELSLQCHRAYGMDGIIMFSDILTPLPTLGIEFDVVKGLGPVISTEVRTEADVAKLKDVESVNFDETLPFIREILGSLSKEAEEANTSLIGFVGAPFTLAAYTIEGKSSKHCLSTKKMMMADEDGSSKAVSQFLDKLAVMIGNYACHQIECGAQVIQVFESWAHQLSPRQFEAFAKPAAQKAIRIIKEKYPDVPVIYFANGGSSYLELQKDMGCDMIAVDWSVDMKEARKILGPDIPISGNIDPTILFGTKEQIEQAVRDCIDKAGGPGKHLLNLGHGVMQGTPEEAVGWLVDECK 396          
BLAST of NO03G04300 vs. NCBI_GenBank
Match: XP_005761026.1 (Uroporphyrinogen decarboxylase [Emiliania huxleyi CCMP1516] >EOD08597.1 Uroporphyrinogen decarboxylase [Emiliania huxleyi CCMP1516])

HSP 1 Score: 422.9 bits (1086), Expect = 1.200e-114
Identity = 209/341 (61.29%), Postives = 254/341 (74.49%), Query Frame = 0
Query:   67 DHDILLRVARGEQAHRTPVWLMRQAGRYMAAFREYSEKYPFRQRSETPAMAIELSMQPLEAFGVDGVIMFSDILTPLPALGINFDVITGKGPVIPKRIATALDIENLQPLDDPEKSLPFVGETLRTLKKEVAGRATLLGFVGAPFTLAAYTIEGGSSKSCLKIKKMMMYDPTLLHVYLDKLATAIGDYACYQIENGAQVIQVFESWAHQLSPSQFLKYSKPYADKVTAIIKAKYPNVPIIFFGHGGSSYLELQKDMNADMICLDWQVDMTTARKTLGS-KPVSGNVDPTILLGPPEGIVAAVDECIGKAGGSG-HILNLGHGVIKTTPEEAVKLFVDTAKS 406
            +HDILLR ARGE   RTPVWLMRQAGRYMAAFREYS KYPFR RSETP +AIELS+QP  AFGVDGV+MFSDILTPLPA+G++FDV+ G GPVIP+ + TA D+  L P+DD E  L F+   L +L+KE  G  TL+GFVG+PFTL AY +EG +++ C+  K+MM   P +LH  LD  AT IG Y C+QIE GAQ IQ FESWAH L   QF  ++KPYADK    IK ++P+VPII++ +GGS YLELQ+DM ADMI LDW  DM TAR+ LG+ + V+GNVDPT+L G    I AAV + I  AGG G H+LNLGHGV++ TPE +V  FV+ AKS
Sbjct:   66 EHDILLRAARGEAVERTPVWLMRQAGRYMAAFREYSTKYPFRMRSETPEVAIELSLQPWRAFGVDGVVMFSDILTPLPAMGVDFDVVRGTGPVIPQPLRTAADVAALTPIDDFESKLGFIRTILGSLRKETEGGCTLIGFVGSPFTLVAYAVEGQANRHCISTKQMMTAAPEVLHAALDHFATEIGKYGCHQIECGAQTIQFFESWAHHLGAGQFDTFAKPYADKAMRYIKERHPDVPIIYYANGGSPYLELQRDMAADMIQLDWGTDMATARRRLGTERRVAGNVDPTVLFGSEAQITAAVHQNIRDAGGKGQHLLNLGHGVLQGTPEASVAAFVNAAKS 406          
BLAST of NO03G04300 vs. NCBI_GenBank
Match: EJK69710.1 (hypothetical protein THAOC_09007 [Thalassiosira oceanica])

HSP 1 Score: 422.2 bits (1084), Expect = 2.000e-114
Identity = 223/386 (57.77%), Postives = 274/386 (70.98%), Query Frame = 0
Query:   35 PAIPSRAATAAHASSSIPLFASAGDATKIINPDHDILLRVARGEQAHRTPVWLMRQAGRYMAAFREYSEKYPFRQRSETPAMAIELSMQPLEAFGVDGVIMFSDILTPLPALGINFDVITGKGPVIPKRIATALDIENLQPLDDP--EKSLPFVGETLRTLKKEV-AGRATLLGFVGAPFTLAAYTIEGGSSKSCLKIKKMMMYDPT----LLHVYLDKLATAIGDYACYQIENGAQVIQVFESWAHQLSPSQFLKYSKPYADKVTAIIKAKYPNVPIIFFGHGGSSYLELQKDMNADMICLDWQVDMTTARKTLG-SKPVSGNVDPTILLGPPEGIVAAVDECIGKAGGSG--HILNLGHGVIKTTPEEAVKLFVDTAKSIEVKE 411
            P+ P R A      S+    A +  +T     D DIL+R ARGE   RTPVWLMRQAGRYM+AFR+YS+KYPFR+RSETP MAIELS+Q   A+G+DG+IMFSDILTPLP LGI+FDVI G GPVI   + T  D+  L   +D   +++LPF+ E L TL KE      +L+GFVG+PFTLA+YTIEG SSK CL  KKMMM D T     +  +LDK+A  IG+YAC+QIE GAQVIQ FESWAHQ SP QF +++KP A K  AI+K +YP+VP+I+F +GGSSYLELQ+DM ADMI +DW VDM  ARK LG   P+SGN+DPT+L G  E I  AV +CI KAGG G  H+LNLGHGV++ TPEEAV   VD  +  + K+
Sbjct:   21 PSSPRRNARTTALPSTPVAEAESAASTTPCEGDRDILVRSARGEVTERTPVWLMRQAGRYMSAFRQYSDKYPFRERSETPGMAIELSLQCHRAYGMDGIIMFSDILTPLPTLGIDFDVIKGIGPVISTEVKTEEDVAKLGNAEDVDFDETLPFIREILGTLSKEAEEANTSLIGFVGSPFTLASYTIEGKSSKHCLDTKKMMMADETGESKAMSQFLDKIAVMIGNYACHQIECGAQVIQFFESWAHQASPKQFSEFAKPAAQKAMAIVKERYPDVPVIYFANGGSSYLELQRDMGADMIAVDWSVDMAEARKILGPDVPISGNIDPTVLFGTKEQIEQAVRDCIDKAGGPGNRHLLNLGHGVMQGTPEEAVGWLVDECRRYKGKD 406          
BLAST of NO03G04300 vs. NCBI_GenBank
Match: GAX29491.1 (hypothetical protein FisN_16Hh066 [Fistulifera solaris])

HSP 1 Score: 414.1 bits (1063), Expect = 5.500e-112
Identity = 214/351 (60.97%), Postives = 258/351 (73.50%), Query Frame = 0
Query:   67 DHDILLRVARGEQAHRTPVWLMRQAGRYMAAFREYSEKYPFRQRSETPAMAIELSMQPLEAFGVDGVIMFSDILTPLPALGINFDVITGKGPVIPKRIATALDIENLQPLDDPEKSLPFVGETLRTLKKEV-AGRATLLGFVGAPFTLAAYTIEGGSSKSCLKIKKMMMYDPT----LLHVYLDKLATAIGDYACYQIENGAQVIQVFESWAHQLSPSQFLKYSKPYADKVTAIIKAKYPNVPIIFFGHGGSSYLELQKDMNADMICLDWQVDMTTARKTLG-SKPVSGNVDPTILLGPPEGIVAAVDECIGKAGGSG-HILNLGHGVIKTTPEEAVKLFVDTAKSIEVKE 411
            D DIL+R ARGE   RTPVW+MRQAGRYMAAFREYS+K PFR+RSETP  A+ELS+Q   A+G+DG+IMFSDILTPLP +GI+FDV+ G GPVI  +I T  D+  L      EK LPF+ E L+ L  E      +L+GFVGAPFTLAAYT+EG SSK CL  KK++M D       + ++LDKLA  IGDYAC+QIE GAQVIQVFESWAHQLSP  F +Y+KP A +   IIK ++P+VP+I+F +GGSSYLELQ+DM ADMI +DW VDM TAR  LG   P+SGN+DP+IL G  E I  A  +CI KAGG G H+LNLGHGV++ TPEEAVK  VD  K  + KE
Sbjct:   60 DRDILVRAARGELVERTPVWMMRQAGRYMAAFREYSDKIPFRERSETPDYAVELSLQCHRAYGMDGIIMFSDILTPLPTMGISFDVVKGTGPVITTKIRTEDDVRQLPSYTFDEK-LPFIREILQRLSVEAEQANTSLIGFVGAPFTLAAYTVEGKSSKDCLTTKKLLMADAADENKCMSLFLDKLANKIGDYACHQIECGAQVIQVFESWAHQLSPQLFAQYAKPAAQQAIRIIKERHPDVPVIYFANGGSSYLELQRDMGADMIAVDWAVDMATARHILGPDVPISGNLDPSILFGTKEQIEQAARDCIDKAGGRGKHLLNLGHGVMQGTPEEAVKWLVDEVKRYKGKE 409          
BLAST of NO03G04300 vs. NCBI_GenBank
Match: GAX26237.1 (hypothetical protein FisN_16Lh066 [Fistulifera solaris])

HSP 1 Score: 412.9 bits (1060), Expect = 1.200e-111
Identity = 212/351 (60.40%), Postives = 258/351 (73.50%), Query Frame = 0
Query:   67 DHDILLRVARGEQAHRTPVWLMRQAGRYMAAFREYSEKYPFRQRSETPAMAIELSMQPLEAFGVDGVIMFSDILTPLPALGINFDVITGKGPVIPKRIATALDIENLQPLDDPEKSLPFVGETLRTLKKEV-AGRATLLGFVGAPFTLAAYTIEGGSSKSCLKIKKMMMYDPT----LLHVYLDKLATAIGDYACYQIENGAQVIQVFESWAHQLSPSQFLKYSKPYADKVTAIIKAKYPNVPIIFFGHGGSSYLELQKDMNADMICLDWQVDMTTARKTLG-SKPVSGNVDPTILLGPPEGIVAAVDECIGKAGGSG-HILNLGHGVIKTTPEEAVKLFVDTAKSIEVKE 411
            D DIL+R ARGE   RTP+W+MRQAGRYMAAFREYS++ PFR+RSETP  A+ELS+Q   A+G+DG+IMFSDILTPLP +GI+FDV+ G GPVI  +I T  D+  L      EK LPF+ E L+ L  E      +L+GFVGAPFTLAAYT+EG SSK CL  KK++M D       + ++LDKL   IGDYAC+QIE GAQVIQVFESWAHQLSP  F +Y+KP A K   IIK ++P+VP+I+F +GGSSYLELQKDM ADMI +DW VDM TAR+ LG   P+SGN+DP+IL G  E I  A  +CI KAGG G H+LNLGHGV++ TPEEAVK  VD  K  + K+
Sbjct:   68 DRDILVRAARGELVERTPIWMMRQAGRYMAAFREYSDRIPFRERSETPDYAVELSLQCHRAYGMDGIIMFSDILTPLPTMGISFDVVKGTGPVITTKIRTEDDVRQLPSYTFDEK-LPFIREILQRLSVEAEQANTSLIGFVGAPFTLAAYTVEGKSSKDCLTTKKLLMADAADENKCMSLFLDKLTNQIGDYACHQIECGAQVIQVFESWAHQLSPQLFKEYAKPAAQKAIRIIKERHPDVPVIYFANGGSSYLELQKDMGADMIAVDWAVDMATARQILGPDVPISGNLDPSILFGTKEQIEQAARDCIDKAGGPGKHLLNLGHGVMQGTPEEAVKWLVDEVKRYKGKQ 417          
BLAST of NO03G04300 vs. NCBI_GenBank
Match: KOO22940.1 (uroporphyrinogen decarboxylase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 411.8 bits (1057), Expect = 2.700e-111
Identity = 223/399 (55.89%), Postives = 274/399 (68.67%), Query Frame = 0
Query:   23 LGSSLHTALAFV-----PAIPSRAATA------AHASSSIPLFASAGDATKIINP----DHDILLRVARGEQAHRTPVWLMRQAGRYMAAFREYSEKYPFRQRSETPAMAIELSMQPLEAFGVDGVIMFSDILTPLPALGINFDVITGKGPVIPKRIATALDIENLQPLDDPEKSLPFVGETLRTLKKEVAGRATLLGFVGAPFTLAAYTIEGGSSKSCLKIKKMMMYDPTLLHVYLDKLATAIGDYACYQIENGAQVIQVFESWAHQLSPSQFLKYSKPYADKVTAIIKAKYPNVPIIFFGHGGSSYLELQKDMNADMICLDWQVDMTTARKTLGS-KPVSGNVDPTILLGPPEGIVAAVDECIGKAGGSG-HILNLGHGVIKTTPEEAVKLFVDTAK 405
            +GS+    LA +     PA P  AA A      A A+SS  + ASA +     NP    +HDILLR ARGE   RTPVWLMRQAGRYM +FRE+S K  FR+RSET  +A ELS+QP +AFG DGVIMFSDILTPLPA+GI FDV+ G GPVI   + T  D+  + P  DP   LPF+ E L +L+KE  G ATLLGFVGAPFTL AY++EG +++ C+  KKMM   P +LH  LD +A AIG YAC+QIE GAQ IQ FESWAH LSP+QF  +++PY D+  A +KA++P VP+I++ +GGSSYLE Q+DM ADMI LDW VDM  AR+ LG+ + VSGNVDPTIL G    I  AV   I +AGG G HIL +GHGV++ TPE +V  FV  AK
Sbjct:    1 MGSAKLVVLAVITLLSAPARPFGAARAPAVRMQATAASSQIIDASAAELRAAPNPPPSAEHDILLRAARGEVTERTPVWLMRQAGRYMRSFREFSTKIEFRKRSETAEIATELSLQPWKAFGTDGVIMFSDILTPLPAMGIEFDVVRGDGPVISSPLRTMADVRAMTPFQDPNTKLPFIREILGSLRKETEGAATLLGFVGAPFTLVAYSVEGEANRHCIHTKKMMTAAPEVLHAALDNVADAIGMYACHQIECGAQSIQFFESWAHHLSPAQFSIFARPYVDRAMAYVKARHPTVPLIYYANGGSSYLERQRDMQADMIALDWAVDMRVARQILGAERKVSGNVDPTILFGSEAQIREAVITNIAEAGGKGRHILGVGHGVLQGTPEASVAAFVRAAK 399          
BLAST of NO03G04300 vs. NCBI_GenBank
Match: XP_002180946.1 (uroporphyrinogen decarboxylase [Phaeodactylum tricornutum CCAP 1055/1] >EEC47598.1 uroporphyrinogen decarboxylase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 407.9 bits (1047), Expect = 4.000e-110
Identity = 209/350 (59.71%), Postives = 257/350 (73.43%), Query Frame = 0
Query:   67 DHDILLRVARGEQAHRTPVWLMRQAGRYMAAFREYSEKYPFRQRSETPAMAIELSMQPLEAFGVDGVIMFSDILTPLPALGINFDVITGKGPVIPKRIATALDIENLQPLDDPEKSLPFVGETLRTLKKEVA-GRATLLGFVGAPFTLAAYTIEGGSSKSCLKIKKMMMYDP----TLLHVYLDKLATAIGDYACYQIENGAQVIQVFESWAHQLSPSQFLKYSKPYADKVTAIIKAKYPNVPIIFFGHGGSSYLELQKDMNADMICLDWQVDMTTARKTLG-SKPVSGNVDPTILLGPPEGIVAAVDECIGKAGGSG-HILNLGHGVIKTTPEEAVKLFVDTAKSIEVK 410
            D DIL+R ARGE   RTPVW+MRQAGRYM AFREYS+  PFR+RSETP  A+ELS+Q   A+G+DG+IMFSDILTPLP LGI+FDV+ G GPVI  ++ T  D+ N+ P  + +  +PF+ E L  L +E      +L+GFVGAPFTLAAYTIEG SSK CL  KK++M D       + ++LDKLA  IGDYACYQIE+GAQVIQVFESWAHQLSP  F  Y+KP A K    IK++YP+ P+I+F +GGSSYLELQ+DM ADMI +DW V+++ AR  LG   PVSGN+DPT+L G  E I  AV +CI +AGG G H+LNLGHGV++ TPEEAVK  VD  K  + K
Sbjct:   82 DRDILVRAARGETVERTPVWMMRQAGRYMEAFREYSDVLPFRERSETPDYAVELSLQCHRAYGMDGIIMFSDILTPLPTLGIDFDVVKGTGPVITTKVRTEEDVNNM-PRHEFDDKVPFIKEILNRLSQEAEDANTSLIGFVGAPFTLAAYTIEGKSSKDCLTTKKLLMADERGDNACISLFLDKLADMIGDYACYQIEHGAQVIQVFESWAHQLSPHWFETYAKPAAQKAIRKIKSQYPDTPVIYFANGGSSYLELQRDMGADMIAVDWAVNLSQARTILGPDVPVSGNLDPTVLFGSKEQIEQAVRDCIDQAGGPGRHLLNLGHGVMQGTPEEAVKWLVDEVKRYKGK 430          
BLAST of NO03G04300 vs. NCBI_GenBank
Match: OEU14972.1 (Uroporphyrinogen decarboxylase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 406.0 bits (1042), Expect = 1.500e-109
Identity = 208/352 (59.09%), Postives = 256/352 (72.73%), Query Frame = 0
Query:   67 DHDILLRVARGEQAHRTPVWLMRQAGRYMAAFREYSEKYPFRQRSETPAMAIELSMQPLEAFGVDGVIMFSDILTPLPALGINFDVITGKGPVIPKRIATALDIENLQPLDDP------EKSLPFVGETLRTLKKEVA-GRATLLGFVGAPFTLAAYTIEGGSSKSCLKIKKMMMYD----PTLLHVYLDKLATAIGDYACYQIENGAQVIQVFESWAHQLSPSQFLKYSKPYADKVTAIIKAKYPNVPIIFFGHGGSSYLELQKDMNADMICLDWQVDMTTARKTLGSK-PVSGNVDPTILLGPPEGIVAAVDECIGKAGGSG--HILNLGHGVIKTTPEEAVKLFVDTAK 405
            D DIL+R A+GE   RTPVWL RQAGRYM AFR YS KYPFRQRSET  MAIELS+Q   A+G+DG+IMFSDILTPLP LGI+FDV+ G GPVI  +I   +D+  L  +D+       ++ LPF+ + L TL KE      +L+GF+GAPFTLAAYTIEG SSK CL  KK+MM D       L ++LDK+AT IG YAC+QI+ GAQVIQ+FESWAHQ SP QF  Y+KP + KV +IIK K+P+ P+I+F +GG+SYLELQ+DM  DMI +DW +D+  ARK LG   P+SGN+DPTIL G  E I  +V +CI KAGG G  H+LNLGHGV++ TPEEAV   +D AK
Sbjct:   60 DRDILIRAAKGEITERTPVWLCRQAGRYMEAFRAYSTKYPFRQRSETSEMAIELSLQCHRAYGMDGIIMFSDILTPLPTLGIDFDVVAGVGPVISTKIENEMDVTTLDTVDETNAKEIFDEKLPFIRDILGTLSKEAEDANTSLIGFIGAPFTLAAYTIEGKSSKHCLDTKKLMMADERNEDKTLPLFLDKVATMIGHYACHQIDCGAQVIQLFESWAHQCSPRQFELYAKPASQKVISIIKEKHPDTPVIYFANGGASYLELQRDMGCDMIAVDWSIDIGEARKILGPDIPISGNIDPTILFGSKEQIEQSVRDCIDKAGGPGNRHLLNLGHGVMQGTPEEAVGWLIDEAK 411          
The following BLAST results are available for this feature:
BLAST of NO03G04300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29859.12.200e-18577.65uroporphyrinogen decarboxylase [Nannochloropsis ga... [more]
XP_005842095.16.500e-12963.29plastid Uroporphyrinogen decarboxylase [Guillardia... [more]
XP_002289084.13.600e-11960.21uroporphyrinogen III decarboxylase [Thalassiosira ... [more]
XP_005761026.11.200e-11461.29Uroporphyrinogen decarboxylase [Emiliania huxleyi ... [more]
EJK69710.12.000e-11457.77hypothetical protein THAOC_09007 [Thalassiosira oc... [more]
GAX29491.15.500e-11260.97hypothetical protein FisN_16Hh066 [Fistulifera sol... [more]
GAX26237.11.200e-11160.40hypothetical protein FisN_16Lh066 [Fistulifera sol... [more]
KOO22940.12.700e-11155.89uroporphyrinogen decarboxylase [Chrysochromulina s... [more]
XP_002180946.14.000e-11059.71uroporphyrinogen decarboxylase [Phaeodactylum tric... [more]
OEU14972.11.500e-10959.09Uroporphyrinogen decarboxylase [Fragilariopsis cyl... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL066nonsL066Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR048ngnoR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005478NSK005478Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G04300.1NO03G04300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667528gene_1629Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100017g11gene786Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G04300.1NO03G04300.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G04300 ID=NO03G04300|Name=NO03G04300|organism=Nannochloropsis oceanica|type=gene|length=1501bp
AGAGTCAAGGATGACCTCGCGAGCACCATCAAGACGACACCAACGAGGGG
CTGTCCTATTCCCCTTCATGCTTGTCCTCGGCAGCAGTCTACACACTGCC
TTAGCCTTTGTCCCTGCTATTCCCAGCCGTGCAGCTACTGCAGCGCATGC
ATCCTCCTCCATTCCGCTTTTTGCCAGTGCCGGGGACGCCACCAAGATCA
TCAACCCTGACCACGACATTTTGCTGCGAGTGGCGCGGGGCGAGCAGGCT
CACCGCACGCCCGTGTGGCTTATGCGACAGGCGGGGCGGTACATGGCTGC
CTTCCGAGAGTACAGCGAGAAGTACCCTTTCCGGCAACGGTCAGAAACTC
CAGCTATGGCAATTGAGCTATCGATGCAGCCTTTGGAGGCTTTTGGGGTA
GATGGGGTGATCATGTTCTCGGACATCCTCACCCCCCTGCCTGCCTTAGG
CATCAATTTTGACGTGATCACAGGCAAAGGGCCAGTCATCCCCAAGCGAA
TCGCTACAGCCTTAGATATTGAAAACTTGCAGCCATTGGATGATCCTGAG
AAGAGCTTGCCTTTTGTGGGGGAGACCCTGCGGACGCTCAAGAAGGAAGT
GGCGGGGCGAGCAACCCTCCTGGGCTTTGTGGGCGCCCCCTTCACGCTTG
CAGCGTATACTATCGAAGGCGGATCCAGCAAATCCTGTCTGAAAATCAAG
AAGATGATGATGTACGATCCGACCCTACTGCATGTCTACTTGGACAAGCT
GGCCACTGCCATTGGTGACTACGCCTGCTACCAAATCGAAAACGGCGCAC
AAGTAATTCAGGTCTTCGAATCCTGGGCCCATCAGCTCTCTCCTTCCCAA
TTCCTCAAATACAGTAAACCATATGCCGACAAAGTCACGGCCATCATCAA
AGCAAAATACCCGAACGTTCCCATCATCTTCTTTGGGCACGGCGGGAGCT
CGTACTTAGAGTTACAGAAGGACATGAACGCCGATATGATCTGTCTGGAC
TGGCAAGTCGACATGACCACAGCCCGTAAAACCCTCGGCTCGAAGCCCGT
CTCGGGGAATGTGGATCCGACTATTCTCCTAGGACCTCCGGAGGGGATCG
TGGCGGCGGTGGATGAGTGTATCGGAAAAGCGGGTGGATCGGGGCACATC
TTGAATTTGGGCCACGGGGTCATTAAGACCACGCCGGAAGAGGCTGTAAA
GCTGTTCGTTGACACGGCCAAGAGTATTGAGGTGAAGGAGGGAGGGGGAG
TGGAGAAGGGTGGAGTGGTGGGTGGGGAGGAGGAGAGTTTGCTGGTGAGG
CCCGCGGCGTTGGCGGGGGCGGCGGCGTGAATGGGGGGTGGAGGGGGCAG
AGGAAGGGCGAGGGAGGAAGGAGATGCAATGTAGGTACTGGATGAAATAT
GCACCGAGGACGAAAGGGAGAGAGAATGAAAGAAGGAGAATGACTAGTAC
GCGCATCGGGGGGGTGCCTTTCCCACCCCCTTCCCCCCCCCTATTTTATT
T
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protein sequence of NO03G04300.1

>NO03G04300.1-protein ID=NO03G04300.1-protein|Name=NO03G04300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=440bp
MTSRAPSRRHQRGAVLFPFMLVLGSSLHTALAFVPAIPSRAATAAHASSS
IPLFASAGDATKIINPDHDILLRVARGEQAHRTPVWLMRQAGRYMAAFRE
YSEKYPFRQRSETPAMAIELSMQPLEAFGVDGVIMFSDILTPLPALGINF
DVITGKGPVIPKRIATALDIENLQPLDDPEKSLPFVGETLRTLKKEVAGR
ATLLGFVGAPFTLAAYTIEGGSSKSCLKIKKMMMYDPTLLHVYLDKLATA
IGDYACYQIENGAQVIQVFESWAHQLSPSQFLKYSKPYADKVTAIIKAKY
PNVPIIFFGHGGSSYLELQKDMNADMICLDWQVDMTTARKTLGSKPVSGN
VDPTILLGPPEGIVAAVDECIGKAGGSGHILNLGHGVIKTTPEEAVKLFV
DTAKSIEVKEGGGVEKGGVVGGEEESLLVRPAALAGAAA*
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Synonyms
Publications