NO03G04220, NO03G04220 (gene) Nannochloropsis oceanica

Overview
NameNO03G04220
Unique NameNO03G04220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length857
Alignment locationchr3:1219236..1220092 +

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Properties
Property NameValue
DescriptionDna-directed rna polymerase iii subunit rpc8
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1219236..1220092 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003899DNA-directed 5'-3' RNA polymerase activity
GO:0016740transferase activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR036898RNA_pol_Rpb7-like_N_sf
IPR013238RNA_pol_III_Rbc25
IPR005576RNA_pol_Rpb7_N
Homology
BLAST of NO03G04220 vs. NCBI_GenBank
Match: EWM29856.1 (dna-directed rna polymerase iii subunit rpc8 [Nannochloropsis gaditana])

HSP 1 Score: 388.3 bits (996), Expect = 1.800e-104
Identity = 216/246 (87.80%), Postives = 233/246 (94.72%), Query Frame = 0
Query:    1 MFQLAIIRDSIKVPPASFNRDQVEVLTEEVDRKYANRIVMDVGLGVCLYDFVEIGDAYLYPSDGAAHHRVTFRLMVFRPFIGEVLVGRVAQCNENGIKVSLGFFDDIFVPSYLLQTPSEFDPRENVWVWTYNSDEPGEPAVRYPMEVDEAIRFRVRSINFAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEIEVGGMVGLRRPRSDTLTGDDGAGGPVAPMQLMGTTNEDGLGMLAWWG 247
            MFQLA+IRD+IKVPPASFNR+Q+EVLTEEVDRKYANRIVM+VGLGVCLYDFV+IGDAYLYPSDGAAHHRVTFRLMVFRPFIGEVLVGRV QC+ENGIK+SLGFFDDIFVPSYLLQTPSEFDPRENVWVW+Y+SDEPGEPAVRYPMEVDE IRFRVRS+NF H    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVE+E GG+  +RRPRSDTLTGD+  GGP+ PMQL+GTTNEDGLGMLAWWG
Sbjct:    1 MFQLAVIRDTIKVPPASFNRNQIEVLTEEVDRKYANRIVMNVGLGVCLYDFVDIGDAYLYPSDGAAHHRVTFRLMVFRPFIGEVLVGRVKQCSENGIKISLGFFDDIFVPSYLLQTPSEFDPRENVWVWSYSSDEPGEPAVRYPMEVDEFIRFRVRSVNFTH-TKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEVEGGGLGQVRRPRSDTLTGDESVGGPLPPMQLLGTTNEDGLGMLAWWG 245          
BLAST of NO03G04220 vs. NCBI_GenBank
Match: XP_005854944.1 (DNA-directed RNA polymerase III subunit RPC8 [Nannochloropsis gaditana CCMP526] >EKU21415.1 DNA-directed RNA polymerase III subunit RPC8 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 343.6 bits (880), Expect = 5.100e-91
Identity = 194/221 (87.78%), Postives = 208/221 (94.12%), Query Frame = 0
Query:   26 LTEEVDRKYANRIVMDVGLGVCLYDFVEIGDAYLYPSDGAAHHRVTFRLMVFRPFIGEVLVGRVAQCNENGIKVSLGFFDDIFVPSYLLQTPSEFDPRENVWVWTYNSDEPGEPAVRYPMEVDEAIRFRVRSINFAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEIEVGGMVGLRRPRSDTLTGDDGAGGPVAPMQLMGTTNEDGLGMLAWWG 247
            +TEEVDRKYANRIVM+VGLGVCLYDFV+IGDAYLYPSDGAAHHRVTFRLMVFRPFIGEVLVGRV QC+ENGIK+SLGFFDDIFVPSYLLQTPSEFDPRENVWVW+Y+SDEPGEPAVRYPMEVDE IRFRVRS+NF H    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVE+E GG+  +RRPRSDTLTGD+  GGP+ PMQL+GTTNEDGLGMLAWWG
Sbjct:    1 MTEEVDRKYANRIVMNVGLGVCLYDFVDIGDAYLYPSDGAAHHRVTFRLMVFRPFIGEVLVGRVKQCSENGIKISLGFFDDIFVPSYLLQTPSEFDPRENVWVWSYSSDEPGEPAVRYPMEVDEFIRFRVRSVNFTH-TKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEVEGGGLGQVRRPRSDTLTGDESVGGPLPPMQLLGTTNEDGLGMLAWWG 220          
BLAST of NO03G04220 vs. NCBI_GenBank
Match: XP_008903061.1 (DNA-directed RNA polymerase [Phytophthora parasitica INRA-310] >ETI50991.1 DNA-directed RNA polymerase [Phytophthora parasitica P1569] >ETK90878.1 DNA-directed RNA polymerase [Phytophthora parasitica] >ETL44286.1 DNA-directed RNA polymerase [Phytophthora parasitica] >ETL97451.1 DNA-directed RNA polymerase [Phytophthora parasitica] >ETM50610.1 DNA-directed RNA polymerase [Phytophthora parasitica] >ETN11243.1 DNA-directed RNA polymerase [Phytophthora parasitica INRA-310] >ETO79732.1 DNA-directed RNA polymerase [Phytophthora parasitica P1976] >ETP20756.1 DNA-directed RNA polymerase [Phytophthora parasitica CJ01A1] >ETP48700.1 DNA-directed RNA polymerase [Phytophthora parasitica P10297])

HSP 1 Score: 198.7 bits (504), Expect = 2.000e-47
Identity = 106/246 (43.09%), Postives = 141/246 (57.32%), Query Frame = 0
Query:    1 MFQLAIIRDSIKVPPASFNRDQVEVLTEEVDRKYANRIVMDVGLGVCLYDFVEIGDAYLYPSDGAAHHRVTFRLMVFRPFIGEVLVGRVAQCNENGIKVSLGFFDDIFVPSYLLQTPSEFDPRENVWVWTYNSDEPGEPAVRYPMEVDEAIRFRVRSINFAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEIEVGGM-VGLRRPRSDTLTGDDGAGGPVAPMQLMGTTNEDGLGMLAWW 246
            MF L  I D I V P  F+ D  +VL EE+DRKYAN+++ DVGL + LYDFV IGDA+++PSDG +H +V FRL+VFRPF+GEVL GR+  C E  I+VS+ F  DI +PSY LQTPS FD  E +WVW Y+     E   ++ M++ E IRFRV +INF                                   + E+  G M   L R RS ++   D    P A + ++GT +EDGLG+ +WW
Sbjct:    1 MFALTRISDVIPVAPELFDADYTQVLIEEIDRKYANKVIADVGLCITLYDFVSIGDAFVHPSDGTSHSQVEFRLVVFRPFVGEVLKGRIVSCTEEHIRVSMDFVQDIIIPSYALQTPSYFDTAERLWVWKYS-----EGQEKFYMDLHEEIRFRVTNINFTR--------------VTKTAKGIQATTTEATDKAEKEVSAGDMRQSLARRRSSSVDLSDNDPTPSA-IHILGTIDEDGLGLSSWW 226          
BLAST of NO03G04220 vs. NCBI_GenBank
Match: XP_009514552.1 (hypothetical protein PHYSODRAFT_538886 [Phytophthora sojae] >EGZ27277.1 hypothetical protein PHYSODRAFT_538886 [Phytophthora sojae])

HSP 1 Score: 198.4 bits (503), Expect = 2.700e-47
Identity = 106/246 (43.09%), Postives = 141/246 (57.32%), Query Frame = 0
Query:    1 MFQLAIIRDSIKVPPASFNRDQVEVLTEEVDRKYANRIVMDVGLGVCLYDFVEIGDAYLYPSDGAAHHRVTFRLMVFRPFIGEVLVGRVAQCNENGIKVSLGFFDDIFVPSYLLQTPSEFDPRENVWVWTYNSDEPGEPAVRYPMEVDEAIRFRVRSINFAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEIEVGGM-VGLRRPRSDTLTGDDGAGGPVAPMQLMGTTNEDGLGMLAWW 246
            MF L  I D I V P  F+ D  +VL EE+DRKYAN+++ DVGL + LYDFV IGDA+++PSDG +H +V FRL+VFRPF+GEVL GR+  C E  I+VS+ F  DI +PSY LQTPS FD  E +WVW Y+     E   ++ M++ E IRFRV +INF                                   + E+  G M   L R RS ++   D    P A + ++GT +EDGLG+ +WW
Sbjct:    1 MFVLTRISDVIPVAPELFDADYTQVLIEEIDRKYANKVIADVGLCITLYDFVSIGDAFVHPSDGTSHSQVEFRLVVFRPFVGEVLKGRIVSCTEEHIRVSMDFVQDIIIPSYALQTPSYFDTAERLWVWKYS-----EGQEKFYMDLHEEIRFRVTNINFTR--------------VTKTAKGIQATTTEATDKAEKEVSAGDMRQSLARRRSSSVDLSDNDPTPSA-IHILGTIDEDGLGLSSWW 226          
BLAST of NO03G04220 vs. NCBI_GenBank
Match: XP_024584234.1 (dna-directed rna polymerase [Plasmopara halstedii] >CEG47865.1 dna-directed rna polymerase [Plasmopara halstedii])

HSP 1 Score: 196.8 bits (499), Expect = 7.800e-47
Identity = 106/248 (42.74%), Postives = 141/248 (56.85%), Query Frame = 0
Query:    1 MFQLAIIRDSIKVPPASFNRDQVEVLTEEVDRKYANRIVMDVGLGVCLYDFVEIGDAYLYPSDGAAHHRVTFRLMVFRPFIGEVLVGRVAQCNENGIKVSLGFFDDIFVPSYLLQTPSEFDPRENVWVWTYNSDEPGEPAVRYPMEVDEAIRFRVRSINFAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEIEVGG---MVGLRRPRSDTLTGDDGAGGPVAPMQLMGTTNEDGLGMLAWW 246
            MF L  I D I V P  F+ D  +VL EE+DRKYAN+++ DVGL + LYDFV IGDA+++PSDG +H +V FRL+VFRPF+GEVL GR+  C E  I+VS+ F  DI +PSY LQTPS FD  E +WVW Y+  +      ++ M++ E IRFRV +INF                                   K E E+G       L R RS ++   D    P A + ++GT +EDGLG+ +WW
Sbjct:    1 MFVLTRISDVIPVEPELFDADYTQVLIEEIDRKYANKVIADVGLCITLYDFVSIGDAHVHPSDGTSHSQVEFRLVVFRPFVGEVLKGRIVSCTEEHIRVSMDFVQDIIIPSYALQTPSYFDTAERLWVWKYSDGQE-----KFFMDLHEEIRFRVTNINFTR----------------VTKTAKGIQATTTEATDKSEKEIGAGDMRRSLARQRSSSVDLSDNDPTPSA-IHILGTIDEDGLGLSSWW 226          
BLAST of NO03G04220 vs. NCBI_GenBank
Match: XP_002895556.1 (DNA-directed RNA polymerase III subunit RPC8, putative [Phytophthora infestans T30-4] >EEY55871.1 DNA-directed RNA polymerase III subunit RPC8, putative [Phytophthora infestans T30-4])

HSP 1 Score: 196.4 bits (498), Expect = 1.000e-46
Identity = 106/246 (43.09%), Postives = 140/246 (56.91%), Query Frame = 0
Query:    1 MFQLAIIRDSIKVPPASFNRDQVEVLTEEVDRKYANRIVMDVGLGVCLYDFVEIGDAYLYPSDGAAHHRVTFRLMVFRPFIGEVLVGRVAQCNENGIKVSLGFFDDIFVPSYLLQTPSEFDPRENVWVWTYNSDEPGEPAVRYPMEVDEAIRFRVRSINFAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEIEVGGM-VGLRRPRSDTLTGDDGAGGPVAPMQLMGTTNEDGLGMLAWW 246
            MF L  I D I V P  F+ D  +VL EE+DRKYAN+++ DVGL + LYDFV IGDA+++PSDG +H +V FRL+VFRPF+GEVL GR+  C E  I+VS+ F  DI +PSY LQTPS FD  E +WVW Y+     E   ++ M++ E IRFRV +INF                                   + EI  G M   L R RS ++   D    P A + ++ T +EDGLG+ +WW
Sbjct:    1 MFVLTRISDVIPVAPELFDADYTQVLIEEIDRKYANKVIADVGLCITLYDFVSIGDAFVHPSDGTSHSQVEFRLVVFRPFVGEVLKGRIVSCTEEHIRVSMDFVQDIIIPSYALQTPSYFDTAERLWVWKYS-----EGQEKFYMDLHEEIRFRVTNINFTR--------------VTKTAKGIQATTTEATDKAEKEISAGDMRQSLARRRSSSVDLSDNDPTPSA-IHILATIDEDGLGLSSWW 226          
BLAST of NO03G04220 vs. NCBI_GenBank
Match: OWZ15698.1 (DNA-directed RNA polymerase III subunit RPC8 [Phytophthora megakarya])

HSP 1 Score: 195.7 bits (496), Expect = 1.700e-46
Identity = 105/246 (42.68%), Postives = 141/246 (57.32%), Query Frame = 0
Query:    1 MFQLAIIRDSIKVPPASFNRDQVEVLTEEVDRKYANRIVMDVGLGVCLYDFVEIGDAYLYPSDGAAHHRVTFRLMVFRPFIGEVLVGRVAQCNENGIKVSLGFFDDIFVPSYLLQTPSEFDPRENVWVWTYNSDEPGEPAVRYPMEVDEAIRFRVRSINFAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEIEVGGM-VGLRRPRSDTLTGDDGAGGPVAPMQLMGTTNEDGLGMLAWW 246
            MF L  I D I V P  F+ D  +VL EE+DRKYAN+++ DVGL + LYDFV IGDA+++PSDG +H +V FR++VFRPF+GEVL GR+  C E  I+VS+ F  DI +PSY LQTPS FD  E +WVW Y+     E   ++ M++ E IRFRV +INF                                   + +I  G M   L R RS ++   D    P A + ++GT +EDGLG+ +WW
Sbjct:    1 MFVLTRISDVIPVAPELFDGDYTQVLIEEIDRKYANKVLTDVGLCITLYDFVSIGDAFVHPSDGTSHSQVEFRMVVFRPFVGEVLKGRIVSCTEEHIRVSMDFVQDIIIPSYALQTPSYFDTTERLWVWKYS-----EGQEKFYMDLHEEIRFRVTNINFTR--------------VTKTAKGIQATTTEATEKAEKDINAGDMRQSLARRRSSSVDLSDNDPTPSA-IHILGTIDEDGLGLSSWW 226          
BLAST of NO03G04220 vs. NCBI_GenBank
Match: POM68455.1 (DNA-directed RNA polymerase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 195.3 bits (495), Expect = 2.300e-46
Identity = 104/246 (42.28%), Postives = 140/246 (56.91%), Query Frame = 0
Query:    1 MFQLAIIRDSIKVPPASFNRDQVEVLTEEVDRKYANRIVMDVGLGVCLYDFVEIGDAYLYPSDGAAHHRVTFRLMVFRPFIGEVLVGRVAQCNENGIKVSLGFFDDIFVPSYLLQTPSEFDPRENVWVWTYNSDEPGEPAVRYPMEVDEAIRFRVRSINFAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEIEVGGM-VGLRRPRSDTLTGDDGAGGPVAPMQLMGTTNEDGLGMLAWW 246
            MF L  I D I V P  F+ D  +VL EE+DRKYAN+++ DVGL + LYDFV IGDA+++PSDG +H +V FR++VFRPF+GEVL GR+  C E  I+VS+ F  DI +PSY LQTPS FD  E +WVW Y+     E   ++ M++ E IRFRV +INF                                   + +   G M   L R RS ++   D    P A + ++GT +EDGLG+ +WW
Sbjct:    1 MFVLTRISDVIPVAPELFDADYTQVLVEEIDRKYANKVIADVGLCITLYDFVSIGDAFVHPSDGTSHSQVEFRMVVFRPFVGEVLKGRIVSCTEEHIRVSMDFVQDIIIPSYALQTPSYFDTAERLWVWKYS-----EGQEKFYMDLHEEIRFRVTNINFTR--------------VTKTAKGIQATTTEATDKAEKDANAGDMRQSLARRRSSSVDLSDNDPTPSA-IHILGTIDEDGLGLSSWW 226          
BLAST of NO03G04220 vs. NCBI_GenBank
Match: CCI46337.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 193.7 bits (491), Expect = 6.600e-46
Identity = 99/245 (40.41%), Postives = 143/245 (58.37%), Query Frame = 0
Query:    1 MFQLAIIRDSIKVPPASFNRDQVEVLTEEVDRKYANRIVMDVGLGVCLYDFVEIGDAYLYPSDGAAHHRVTFRLMVFRPFIGEVLVGRVAQCNENGIKVSLGFFDDIFVPSYLLQTPSEFDPRENVWVWTYNSDEPGEPAVRYPMEVDEAIRFRVRSINFAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEIEVGGMVGLRRPRSDTLTGDDGAGGPVAPMQLMGTTNEDGLGMLAWW 246
            MF L  I D I + P  F+ D  +VL EE+DRKY N+++ DVGL + +YDF+ IGDA ++PS+G +H +V FR++VFRPFIGEVL G++  CNEN I++++ F  DI +PSY LQTPS FD  E +WVWT+      + A ++ M+++E IRFRV ++NF                                   K  ++ G +   RR R  ++   D    P A MQ++GT +EDGLG+ +WW
Sbjct:    1 MFVLTRISDVIAIHPMLFDGDYTKVLKEEIDRKYCNKVIADVGLCISVYDFIAIGDALIHPSEGDSHTQVEFRMIVFRPFIGEVLKGKILSCNENHIRITMEFMQDILIPSYALQTPSHFDTYERLWVWTFT-----DSAEKFHMDLNEEIRFRVTNVNFTQ-------------VHKTAKGMQATTSESTEKKDKASLKRGNLDDKRR-RLSSVDLSDSDPTPSA-MQILGTIDEDGLGLTSWW 225          
BLAST of NO03G04220 vs. NCBI_GenBank
Match: CCA17366.1 (DNAdirected RNA polymerase III subunit RPC8 putative [Albugo laibachii Nc14])

HSP 1 Score: 191.8 bits (486), Expect = 2.500e-45
Identity = 98/245 (40.00%), Postives = 142/245 (57.96%), Query Frame = 0
Query:    1 MFQLAIIRDSIKVPPASFNRDQVEVLTEEVDRKYANRIVMDVGLGVCLYDFVEIGDAYLYPSDGAAHHRVTFRLMVFRPFIGEVLVGRVAQCNENGIKVSLGFFDDIFVPSYLLQTPSEFDPRENVWVWTYNSDEPGEPAVRYPMEVDEAIRFRVRSINFAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEIEVGGMVGLRRPRSDTLTGDDGAGGPVAPMQLMGTTNEDGLGMLAWW 246
            MF LA I D I + P  F+ D   VL EE+D+K+ N+++ DVGL + +YDF+ IGDA ++PS+G +H +V FR++VFRPFIGEVL G++  CNEN I++++ F  DI +PSY LQTPS FD  E +WVWT+   E GE   ++ M+++E +RFRV ++NF                                         GG +  R+ R  ++   D    P A MQ++GT +EDGLG+ +WW
Sbjct:    1 MFVLARISDVIAIHPMLFDGDYTRVLKEEIDKKFCNKVIADVGLCISVYDFIAIGDALIHPSEGDSHTQVEFRMVVFRPFIGEVLKGKILSCNENHIRITMEFMQDILIPSYALQTPSHFDTYERLWVWTFT--ESGE---KFHMDLNEEVRFRVTNVNFTQVHKTAKGMQATTIESTDKDGKSTLK--------------GGNIDDRKRRLSSVDLSDNDPTPSA-MQILGTIDEDGLGLTSWW 225          
The following BLAST results are available for this feature:
BLAST of NO03G04220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29856.11.800e-10487.80dna-directed rna polymerase iii subunit rpc8 [Nann... [more]
XP_005854944.15.100e-9187.78DNA-directed RNA polymerase III subunit RPC8 [Nann... [more]
XP_008903061.12.000e-4743.09DNA-directed RNA polymerase [Phytophthora parasiti... [more]
XP_009514552.12.700e-4743.09hypothetical protein PHYSODRAFT_538886 [Phytophtho... [more]
XP_024584234.17.800e-4742.74dna-directed rna polymerase [Plasmopara halstedii]... [more]
XP_002895556.11.000e-4643.09DNA-directed RNA polymerase III subunit RPC8, puta... [more]
OWZ15698.11.700e-4642.68DNA-directed RNA polymerase III subunit RPC8 [Phyt... [more]
POM68455.12.300e-4642.28DNA-directed RNA polymerase [Phytophthora palmivor... [more]
CCI46337.16.600e-4640.41unnamed protein product [Albugo candida][more]
CCA17366.12.500e-4540.00DNAdirected RNA polymerase III subunit RPC8 putati... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL066nonsL066Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR048ngnoR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005471NSK005471Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G04220.1NO03G04220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572894gene_1619Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100017g5gene780Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G04220.1NO03G04220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G04220 ID=NO03G04220|Name=NO03G04220|organism=Nannochloropsis oceanica|type=gene|length=857bp
ATGTTTCAGCTGGCCATTATCCGGGACTCAATCAAGGTGCCGCCAGCGTC
CTTCAACCGGGACCAGGTCGAGgtatgcacatttcttgtcctccattcgt
ccttcaagtcccaccttggaccctccctccctcccgcacacaacccctca
ccattctcccccttcatcatccctccccccgacgctagGTTTTGACGGAG
GAAGTAGACCGAAAATATGCGAATCGCATCGTGATGGACGTTGGCCTGGG
TGTGTGCTTGTACGATTTTGTAGAGATCGGGGACGCCTATCTCTACCCCT
CCGACGGGGCGGCGCACCACCGCGTGACATTCCGCTTAATGGTCTTCCGT
CCATTCATTGGAGAGGTGTTGGTAGGCCGCGTGGCGCAATGCAATGAAAA
TGGCATCAAAGTCAGCTTGGGGTTCTTTGACGACATATTTGTGCCGTCGT
ACTTGCTCCAAACGCCCTCGGAATTTGATCCCCGGGAGAATGTGTGGGTA
TGGACGTACAACAGCGATGAGCCCGGCGAGCCCGCCGTGCGATACCCTAT
GGAAGTGGACGAAGCCATTCGTTTTCGTGTCCGCTCCATAAATTTTGCGC
ATATCAAGCACAGTGGTAGTAGTGGTAGTAGTGGGGCGGTGGGGGGGTTG
GGAAGCGTGGCGACGGGCCCTGTGGGCAGCATGGGCAATCCCACAAATCC
CAAAGTAGAGATAGAAGTGGGAGGGATGGTTGGATTGAGAAGGCCACGGA
GTGATACCTTGACAGGGGACGATGGCGCGGGTGGACCGGTGGCACCGATG
CAGTTAATGGGGACGACGAATGAGGATGGGTTGGGGATGTTGGCGTGGTG
GGGATAG
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protein sequence of NO03G04220.1

>NO03G04220.1-protein ID=NO03G04220.1-protein|Name=NO03G04220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=247bp
MFQLAIIRDSIKVPPASFNRDQVEVLTEEVDRKYANRIVMDVGLGVCLYD
FVEIGDAYLYPSDGAAHHRVTFRLMVFRPFIGEVLVGRVAQCNENGIKVS
LGFFDDIFVPSYLLQTPSEFDPRENVWVWTYNSDEPGEPAVRYPMEVDEA
IRFRVRSINFAHIKHSGSSGSSGAVGGLGSVATGPVGSMGNPTNPKVEIE
VGGMVGLRRPRSDTLTGDDGAGGPVAPMQLMGTTNEDGLGMLAWWG*
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Synonyms
Publications