NO03G04210, NO03G04210 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G04210 vs. NCBI_GenBank
Match: EWM29847.1 (RNA helicase, DEAD-box type [Nannochloropsis gaditana]) HSP 1 Score: 824.3 bits (2128), Expect = 2.500e-235 Identity = 441/552 (79.89%), Postives = 482/552 (87.32%), Query Frame = 0 Query: 19 NALPATSTXXXXXXXTWAIHSSTR-RGRRAPTSTSTLLLLAMPFLLASTLTRPACLVTAFVGRPQVLT-VARASTRARTAATFRMMGAFGGISSQPFSSPAITPKTPSGNSNDGNNNALDLAEFRRLGLGEEVLEGLRAMGIKDPSVIQRIAIPPALKGEDIAFSAATGSGKTLAYLLPIMQRLKWQEAQEGYARQSCRPRALILVPTRELVTQVVEVTKALSHVVKLSSCGLHGGDDFGVQRRRLGGMVDVVVASPGRLLQHYEKGHVFFSQVTNVVVDEMDTMLKDGFGPDLKRLMVPLETKSKRDKIQYLMATATLTPAVKKLMVDEGNFPKTRFLQSEDAHKSLPTMRHIMLDTKGGDKVQLLLDVVSQSRQNGERVMIFCNTVASCRATEHALREVALSSVCYHGDMRSDERAAALEKFKTGEISFLVCTDIASRGLDMPFVEHVVMFDFPLNPIEYLHRSGRTARMGAKGKVTSLLTKRDKVLASAVQTAVAKGLPLDALSARKRDYESGGKLSGLSSGKVGS--SSKGNKHTKYVANGQKSASGR 567 +ALP T+T + AIH +R R T + LLLAMP LL+ TR C+V+AF RP + V+R R+R RMMGAFGGISSQPFS+PAI KT S + ++ N A DLAEFRRLGLGEE LEGLR +GIK+PSVIQR+AIP ALKG+D+AFSA+TGSGKTLAYLLPIMQ LKWQEA EG RQ+CRPRALILVPTRELVTQV+EV K+LSHV+KLSSCGLHGG+DFGVQRRRLGGMVD+VVASPGRLLQHYEKGHVFFSQVT+VVVDEMDTMLKDGFGPDLKRLMVPLE KSKR+K+QYLMATATLTPAVK+LM +EGNFPKTRFLQSEDAHKSLPTMRHIMLDTKGGDKVQLLLDVVSQ RQNGER MIFCNTV SCRA EHALRE+AL S CYHGDMRS+ERAAALEKFK+GE+SFLVCTDIASRGLDMPFVEHVVMFDFPLNPIEYLHRSGRTARMGAKGKVTSLLTKRDKVLASAVQTAVAKGLPLD+LSARKRDYESGGKLSGLSSGK+G+ SSKGN+H KYVAN Q+SASGR Sbjct: 17 SALPNTAT-----TASRAIHFQSRLRLAFRTTPSICALLLAMPLLLSPHWTRSVCVVSAFHLRPSTASKVSRGVGRSR--EVLRMMGAFGGISSQPFSTPAIPSKTTSRSGDE--NAACDLAEFRRLGLGEETLEGLRKLGIKEPSVIQRLAIPAALKGDDVAFSASTGSGKTLAYLLPIMQELKWQEAVEGKERQTCRPRALILVPTRELVTQVLEVIKSLSHVIKLSSCGLHGGEDFGVQRRRLGGMVDLVVASPGRLLQHYEKGHVFFSQVTHVVVDEMDTMLKDGFGPDLKRLMVPLEAKSKREKVQYLMATATLTPAVKRLMAEEGNFPKTRFLQSEDAHKSLPTMRHIMLDTKGGDKVQLLLDVVSQGRQNGERAMIFCNTVQSCRAAEHALRELALPSACYHGDMRSEERAAALEKFKSGEVSFLVCTDIASRGLDMPFVEHVVMFDFPLNPIEYLHRSGRTARMGAKGKVTSLLTKRDKVLASAVQTAVAKGLPLDSLSARKRDYESGGKLSGLSSGKMGASPSSKGNRHAKYVANRQRSASGR 559
BLAST of NO03G04210 vs. NCBI_GenBank
Match: CBJ32858.1 (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 460.7 bits (1184), Expect = 7.300e-126 Identity = 233/426 (54.69%), Postives = 316/426 (74.18%), Query Frame = 0 Query: 133 NALDLAEFRRLGLGEEVLEGLRAMGIKDPSVIQRIAIPPALKGEDIAFSAATGSGKTLAYLLPIMQRLKWQEAQ--EG--YARQSCRPRALILVPTRELVTQVVEVTKALSHVVKLSSCGLHGGDDFGVQRRRLGGMVDVVVASPGRLLQHYEKGHVFFSQVTNVVVDEMDTMLKDGFGPDLKRLMVP-LETKSKRDKIQYLMATATLTPAVKKLMVDEGNFPKTRFLQSEDAHKSLPTMRHIMLDTKGGDKVQLLLDVVSQSRQNGERVMIFCNTVASCRATEHALREVALSSVCYHGDMRSDERAAALEKFKTGEISFLVCTDIASRGLDMPFVEHVVMFDFPLNPIEYLHRSGRTARMGAKGKVTSLLTKRDKVLASAVQTAVAKGLPLDALSARKRDYESGGKLSGLSSGKVGSSSKGNKHT 554 + ++ +F LGL +++++ + G PS IQR AIP L G +I F+A+TGSGKTLAYL+P++Q+LK +EAQ EG RQ+ RPRA++LVPTREL QV+EV K LS K SSCG+ GG+D+G QR+RL G VD+VV +PGRLL+H+E G+ F S+ VVVDE+DTML GF D+++L P L ++RD Q++ TATLT AV+KL+ ++G++ K R +++ D H +LP++RH+M+D KG DK+ L+D+ Q ++ +R ++FCNTV SCRA E LREV + ++ YHG++ SDER++ LE+FK G+ +LVCTDIASRGLDMP V+HVVMFDFPLNPI+YLHRSGRTARMGAKG+VTSLL KRD VLA+A++ AV GLPLD LS+R+ DY +GGKL L K S KG+ H+ Sbjct: 13 DVIEEMDFTGLGLLDDLVDAMEEFGFDSPSKIQRKAIPQILNGGNIVFAASTGSGKTLAYLMPLIQQLKVEEAQAEEGGESIRQTKRPRAIVLVPTRELAMQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRLLKHHEAGNFFMSKANYVVVDEVDTMLTQGFAADIEKLNRPLLANPNRRDMAQFIFVTATLTKAVRKLLGEDGDYSKVRQVETRDVHHTLPSLRHVMIDIKGRDKMSALIDIAQQHLKDFKRTLVFCNTVKSCRAAEFGLREVDVKALSYHGEVPSDERSSNLERFKAGQAKYLVCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGKLGPLFGRKGKVSVKGSHHS 438
BLAST of NO03G04210 vs. NCBI_GenBank
Match: CEM06502.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 387.5 bits (994), Expect = 7.900e-104 Identity = 202/420 (48.10%), Postives = 286/420 (68.10%), Query Frame = 0 Query: 137 LAEFRRLGLGEEVLEGLRAM-GIKDPSVIQRIAIPPALKGEDIAFSAATGSGKTLAYLLPIMQRLKWQEAQEGYARQSCRPRALILVPTRELVTQVVEVTKALSHVVKLSSCGLHGGDDFGVQRRRLGGMVDVVVASPGRLLQHYEKGHVFFSQVTNVVVDEMDTMLKDGFGPDLKRLMVPLETKSKRDKIQYLMATATLTPAVKKLMVDEGNFPKTRFLQSEDAHKSLPTMRHIMLDTKGGDKVQLLLDVV------------SQSRQNGE----RVMIFCNTVASCRATEHALREVALSSVCYHGDMRSDERAAALEKFKTGEISFLVCTDIASRGLDMPFVEHVVMFDFPLNPIEYLHRSGRTARMGAKGKVTSLLTKRDKVLASAVQTAVAKGLPLDALSARKRDYESGGKLSGLS 540 + ++RRLGL E + G +M G +P+ IQR+AIP L G +I F+A TGSGKTLAYLLP+MQ LK +E R+ RPRALIL PTREL QV+EV + S + KLSSC + GGD F Q+R L ++DVVV +PGR+L H++K ++ S+V+ VV+DE+DTML GFGPD+ +L+ PL T+ ++ Q + ATATLT AV++L+ D+ + P R++++ HKSLP +R+ M+DTKG DK+ L +++ R GE ++FCNTV SCRA +HA++E +S+ YHG++ ++R A LE F+ G++ +LVCTD+A+RGLD+ V+ VVMFDFPLNPI+++HR+GRT KG V LL +RD+VLA+ VQ A+ G PL LS+ ++DYE GG+L LS Sbjct: 843 MLKWRRLGLEESIARGTASMLGDVEPTAIQRLAIPQVLSGGNIVFAAETGSGKTLAYLLPMMQHLKSEELDGRSLRRPKRPRALILSPTRELSQQVLEVLRGSSQLAKLSSCSVIGGDSFAKQKRDLSKILDVVVGTPGRVLFHWDKSNLALSEVSYVVIDEVDTMLMQGFGPDINKLLQPLITRPDTEQPQLVFATATLTKAVRRLL-DQEDLPAVRYVEAPGLHKSLPNVRYEMIDTKGEDKLDALRELLKVRGPQRPAEGGDGQRGAGEVYRKSTLVFCNTVNSCRACQHAIQEAGFTSLAYHGEVPQEQRKANLEAFRHGQVPYLVCTDLAARGLDIAQVDQVVMFDFPLNPIDFIHRAGRTXXXXXKGSVLCLLQRRDRVLATGVQRAIRLGRPLSDLSSSRKDYEKGGRLEQLS 1261
BLAST of NO03G04210 vs. NCBI_GenBank
Match: XP_002183622.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44804.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 346.7 bits (888), Expect = 1.500e-91 Identity = 201/494 (40.69%), Postives = 294/494 (59.51%), Query Frame = 0 Query: 109 SSQPFSSPAITPKTPSGNSNDGNNNALDLAEFRRLGLGEEVLEGLRAMGIKDPSVIQRIAIPPALK--GEDIAFSAATGSGKTLAYLLPIMQRLKWQEAQEGYARQSCRPRALILVPTRELVTQVVEVTKALSHVVKLSSCGLHGGDDFGVQRRRLGGMVDVVVASPGRLLQHYEKGHVFFSQVTNVVVDEMDTMLKDGFGPDLKRLMVPLETKSKRDK------------IQYLMATATLTPAVKKLMVDEGN--------------------------FPKTRFLQSEDAHKSLPTMRHIMLDTKGGDKVQLLLDVVSQSRQNGERV-----------MIFCNTVASCRATEHALREVALSSVCYHGDMRSDERAAALEKFKTG-----------EISFLVCTDIASRGLDMPFVEHVVMFDFPLNPIEYLHRSGRTAR-----MGAKGKVTSLLTKRDKVLASAVQTAVAKGLPLDALSARKRDYESGGKL 536 S PF P +P + N L + +LGL E++E + + ++ P+ +Q++AIP LK + +AF AATGSGKTLAY LP++Q LK E Y R+ RPR LILVPTRELV Q+ V K++SH +KLSSC + GG+D+GVQRR+L +DVVVA+PGRL +H++ ++F + ++VVDEMDTML+ GF +L++L+ P+ + D+ + ++ +AT+T ++K++ D N P+T+ L++ HK++P ++ + +D DK+ LL+D+VS S +G V MIFCNT ASCRA + AL E + S+ YHGD+ S R+ L++F+ E LVCTD+A+RGLD+P V+H+VMFDFPLN ++YLHRSGRTAR G+VT+L++KRDKVLA+A++ AV +G LD LS+RK DY G +L Sbjct: 4 SRAPFRMPRDSPDDSVPQAAAKTN----LLAWNQLGLWTELVEAMARLELQTPTPVQQLAIPELLKEPPQHLAFLAATGSGKTLAYALPLLQMLKQGEVFADYERRPKRPRLLILVPTRELVVQITSVIKSVSHSIKLSSCSITGGEDYGVQRRQLNRPIDVVVATPGRLTKHWKDSNLFLGSLEHIVVDEMDTMLEQGFYRELRQLLYPVLYHKQADQEINVEQDLDAKAPRIVLTSATMTQQIQKIIGDSDNKKNLVNAKRHHRKVEDAGFQVKVPMVLPRTKVLKAAGLHKTVPRLQQVFVDVGATDKLSLLVDIVS-SGGSGAAVAASLTDQQALTMIFCNTAASCRAAQFALSEARIESLAYHGDLNSAMRSENLKRFRAAGKKNCDNALAEEPRVLVCTDLAARGLDVPQVDHIVMFDFPLNALDYLHRSGRTARGVGGDRTGNGRVTALISKRDKVLANAIEQAVLRGDTLDGLSSRKSDYLPGARL 492
BLAST of NO03G04210 vs. NCBI_GenBank
Match: PRW05784.1 (DEAD-box ATP-dependent RNA helicase 39 [Chlorella sorokiniana]) HSP 1 Score: 345.9 bits (886), Expect = 2.600e-91 Identity = 186/395 (47.09%), Postives = 261/395 (66.08%), Query Frame = 0 Query: 140 FRRLGLGEEVLEGLRAMGIKDPSVIQRIAIPPAL--KGEDIAFSAATGSGKTLAYLLPIMQRLKWQEAQEGYA-RQSCRPRALILVPTRELVTQVVEVTKALSHVVKLSSCGLHGGDDFGVQRRRLGGMVDVVVASPGRLLQHYEKGHVFFSQVTNVVVDEMDTMLKDGFGPDLKRLMVPLETKSKRDKIQYLMATATLTPAVKKLMVDEGNFPKTRFLQSEDAHKSLPTMRHIMLD-TKGGDKVQLLLDVVSQSRQNGERVMIFCNTVASCRATEHALREVALSSVCYHGDMRSDERAAALEKFKTGEIS---FLVCTDIASRGLDMP-FVEHVVMFDFPLNPIEYLHRSGRTARMGAKGKVTSLLTKRDKVLASAVQTAVAKGLPLDALSARK 527 F +G+ E+ L GI P+ IQ A+P L + D ++ TGSGKTLAYLLP++Q LK EA +G A + RPRAL+L PTREL Q++ V KAL+H K S ++GG D G QR +L +DV+V +P R++QH EK HV++ V VV+DE DTM GFGP++K ++ + +SK + +M +AT+T AVK+LM +E FP + +++ H+ + RH L +K+ LL+ VV G+R+MIFCNT+ASCRA +H LRE L + CYHGD+ DER AA++ F ++S LVCTD+A+RGLD+P V+HV+ FDFPLNP++YLHR+GRTAR GA GK+TSL+ K D+VLA ++ A+ +GLPLD+LSA + Sbjct: 74 FGEIGVMPELQAALAEQGISTPTEIQAAAVPALLRHRSTDFVLASHTGSGKTLAYLLPVVQLLKEAEAHQGSAPAKPKRPRALVLGPTRELTDQILRVAKALAHTAKFRSALVNGGGDMGSQREQLERPLDVLVGTPQRVMQHAEKSHVYYGDVEVVVLDEADTMFDRGFGPEVKAILSAV--RSKAQPARCVMVSATMTKAVKRLMEEE--FPGMKQIETATLHRGVAGARHTFLPLPPAANKLDLLMQVVEGEHLRGKRLMIFCNTLASCRAADHFLRERGLQTACYHGDVPVDERKAAIQSFAHADLSRPPLLVCTDLAARGLDIPGRVDHVINFDFPLNPVDYLHRTGRTARAGATGKITSLVGKGDRVLAERIEDALQRGLPLDSLSANR 464
BLAST of NO03G04210 vs. NCBI_GenBank
Match: OAE27937.1 (hypothetical protein AXG93_3309s1340 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 341.3 bits (874), Expect = 6.500e-90 Identity = 184/416 (44.23%), Postives = 267/416 (64.18%), Query Frame = 0 Query: 120 PKTPSGNSNDGNNNALDLAE-FRRLGLGEEVLEGLRAMGIKDPSVIQRIAIPPALKGEDIAFSAATGSGKTLAYLLPIMQRLKWQEAQEGYARQSCRPRALILVPTRELVTQVVEVTKALSHVVKLSSCGLHGGDDFGVQRRRLGGMVDVVVASPGRLLQHYEKGHVFFSQVTNVVVDEMDTMLKDGFGPDLKRLMVPLETKSKR---DKIQYLMATATLTPAVKKLMVDEGNFPKTRFLQSEDAHKSLPTMRHIMLDTKGGD-KVQLLLDVVSQSRQNGERVMIFCNTVASCRATEHALREVALSSVCYHGDMRSDERAAALEKFK--TGEISF--LVCTDIASRGLDMPFVEHVVMFDFPLNPIEYLHRSGRTARMGAKGKVTSLLTKRDKVLASAVQTAVAKGLPLDALSARK 527 P SG + LA+ F +LGL +E++ + +GI P+ +Q + IP GE + ++ TGSGKTLAY+LPI+Q L+ EA+ G A ++ RPRA++L PTREL QV V K+L H + + + GG Q L VD+VV +PGRLL H ++GH+ + + V +DE DTM GFGP++++ + PL +S + Q ++ TAT+T AV+K++ +E FP R + + HK + + RH L G + K++ L V+ S G RVM+FCNT+ SCRA +H LRE + +V YHG++ ++ER L KFK TG SF LVCTD+A+RGLD+ V+HV+MFDFPLNP++YLHR+GRTARMGAKGKVTSL+TKRD LA ++ A+++G L+AL++ + Sbjct: 88 PGRLSGKEESAKPVSTPLAQSFEQLGLSDELMSAVIELGISKPTEVQSLGIPAVSNGESVVLASHTGSGKTLAYMLPIVQALRRDEAESGKATRARRPRAVVLCPTRELAEQVFHVAKSLCHHARFRAAMIGGGLKMKPQEDILNSAVDMVVGTPGRLLMHVKEGHMAYGDIKYVALDEADTMFDRGFGPEVRKFLGPLRNRSSQPGGTGFQTVLVTATITKAVQKVLDEE--FPGIRHIHTSTLHKKVSSARHDFLKLSGTENKLEALQQVLEPSLAKGNRVMVFCNTLNSCRAIDHFLRENGIQTVNYHGEIPAEERVENLNKFKEETGARSFPALVCTDLAARGLDL-VVDHVIMFDFPLNPVDYLHRTGRTARMGAKGKVTSLVTKRDSTLAGQIEDAMSRGESLEALTSSR 500
BLAST of NO03G04210 vs. NCBI_GenBank
Match: PTQ32736.1 (hypothetical protein MARPO_0095s0002 [Marchantia polymorpha]) HSP 1 Score: 341.3 bits (874), Expect = 6.500e-90 Identity = 184/416 (44.23%), Postives = 267/416 (64.18%), Query Frame = 0 Query: 120 PKTPSGNSNDGNNNALDLAE-FRRLGLGEEVLEGLRAMGIKDPSVIQRIAIPPALKGEDIAFSAATGSGKTLAYLLPIMQRLKWQEAQEGYARQSCRPRALILVPTRELVTQVVEVTKALSHVVKLSSCGLHGGDDFGVQRRRLGGMVDVVVASPGRLLQHYEKGHVFFSQVTNVVVDEMDTMLKDGFGPDLKRLMVPLETKSKR---DKIQYLMATATLTPAVKKLMVDEGNFPKTRFLQSEDAHKSLPTMRHIMLDTKGGD-KVQLLLDVVSQSRQNGERVMIFCNTVASCRATEHALREVALSSVCYHGDMRSDERAAALEKFK--TGEISF--LVCTDIASRGLDMPFVEHVVMFDFPLNPIEYLHRSGRTARMGAKGKVTSLLTKRDKVLASAVQTAVAKGLPLDALSARK 527 P SG + LA+ F +LGL +E++ + +GI P+ +Q + IP GE + ++ TGSGKTLAY+LPI+Q L+ EA+ G A ++ RPRA++L PTREL QV V K+L H + + + GG Q L VD+VV +PGRLL H ++GH+ + + V +DE DTM GFGP++++ + PL +S + Q ++ TAT+T AV+K++ +E FP R + + HK + + RH L G + K++ L V+ S G RVM+FCNT+ SCRA +H LRE + +V YHG++ ++ER L KFK TG SF LVCTD+A+RGLD+ V+HV+MFDFPLNP++YLHR+GRTARMGAKGKVTSL+TKRD LA ++ A+++G L+AL++ + Sbjct: 88 PGRLSGKEESAKPVSTPLAQSFEQLGLSDELMSAVIELGISKPTEVQSLGIPAVSNGESVVLASHTGSGKTLAYMLPIVQALRRDEAESGKATRARRPRAVVLCPTRELAEQVFHVAKSLCHHARFRAAMIGGGLKMKPQEDILNSAVDMVVGTPGRLLMHVKEGHMAYGDIKYVALDEADTMFDRGFGPEVRKFLGPLRNRSSQPGGTGFQTVLVTATITKAVQKVLDEE--FPGIRHIHTSTLHKKVSSARHDFLKLSGTENKLEALQQVLEPSLAKGNRVMVFCNTLNSCRAIDHFLRENGIQTVNYHGEIPAEERVENLNKFKEETGARSFPALVCTDLAARGLDL-VVDHVIMFDFPLNPVDYLHRTGRTARMGAKGKVTSLVTKRDSTLAGQIEDAMSRGESLEALTSSR 500
BLAST of NO03G04210 vs. NCBI_GenBank
Match: XP_022880066.1 (DEAD-box ATP-dependent RNA helicase 39 [Olea europaea var. sylvestris]) HSP 1 Score: 340.1 bits (871), Expect = 1.400e-89 Identity = 192/438 (43.84%), Postives = 274/438 (62.56%), Query Frame = 0 Query: 114 SSPAITPKTPSGNSNDGNNNALDLAE---------------FRRLGLGEEVLEGLRAMGIKDPSVIQRIAIPPALKGEDIAFSAATGSGKTLAYLLPIMQRLKWQEAQEGYARQSCRPRALILVPTRELVTQVVEVTKALSHVVKLSSCGLHGGDDFGVQRRRLGGMVDVVVASPGRLLQHYEKGHVFFSQVTNVVVDEMDTMLKDGFGPDLKRLMVPLE---TKSKRDKIQYLMATATLTPAVKKLMVDEGNFPKTRFLQSEDAHKSLPTMRHIMLDTKGGD-KVQLLLDVVSQSRQNGERVMIFCNTVASCRATEHALREVALSSVCYHGDMRSDERAAALEKFKT--GEISFLVCTDIASRGLDMPFVEHVVMFDFPLNPIEYLHRSGRTARMGAKGKVTSLLTKRDKVLASAVQTAVAKGLPLDALSAR--KRD 529 S+ P TP G+S+ G + +E F LGL EEV+ L MGI +P+ IQ I IP L+G+ + + TGSGKTLAYLLP++Q L+ E G + RPRA++L PTREL QV V+K++SH + S + GG Q L VD+VV +PGR+LQH E+G++ + + VV+DE DTM GFGPD+++ + PL+ +K+ + Q +M TAT+T AV+KL+ +E F L++ HK + + RH + G + K++ LL V+ S G RVM+FCNT+ S RA +H L E LS+V YHG++ +++R L+KFK+ G+ LVCTD+A+RGLD+ V+HV+MFDFPLN I+YLHR+GRTARMGAKGKVTSL+ K+D +LA+ ++ A+ K L++LS KRD Sbjct: 85 SAKITPPATPVGSSSSGKKSKYGESEGSRKKKGGGVEMVSSFWELGLSEEVMGALGEMGISEPTEIQCIGIPAVLEGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEILHGMLMKPRRPRAVVLCPTRELCEQVFRVSKSISHHARFRSTMVSGGGRLRPQEDSLNSPVDMVVGTPGRVLQHIEEGNMVYGDIRYVVLDEADTMFDRGFGPDIRKFIAPLKNRASKADSEGFQTVMVTATMTKAVQKLVDEE--FQGIIHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLNENQLSTVNYHGEVPAEQRVENLQKFKSNDGDCPTLVCTDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDVMLANHIEEAIMKNESLESLSVESVKRD 519
BLAST of NO03G04210 vs. NCBI_GenBank
Match: PSC71941.1 (DEAD-box ATP-dependent RNA helicase 39 [Micractinium conductrix]) HSP 1 Score: 340.1 bits (871), Expect = 1.400e-89 Identity = 192/439 (43.74%), Postives = 275/439 (62.64%), Query Frame = 0 Query: 138 AEFRRLGLGEEVLEGLRAMGIKDPSVIQRIAIPPAL--KGEDIAFSAATGSGKTLAYLLPIMQRLKWQEAQEGYARQSCRPRALILVPTRELVTQVVEVTKALSHVVKLSSCGLHGGDDFGVQRRRLGGMVDVVVASPGRLLQHYEKGHVFFSQVTNVVVDEMDTMLKDGFGPDLKRLMVPLETKSKRDKIQYLMATATLTPAVKKLMVDEGNFPKTRFLQSEDAHKSLPTMRHIMLD-TKGGDKVQLLLDVVSQSRQNGERVMIFCNTVASCRATEHALREVALSSVCYHGDMRSDERAAALEKFKTGE---ISFLVCTDIASRGLDMP-FVEHVVMFDFPLNPIEYLHRSGRTARMGAKGKVTSLLTKRDKVLASAVQTAVAKGLPLDALSARKRDYESGGKLSGLSSGKVGSSSKGNKHTKYVANG----QKSASG 566 A F LG+ E+ L GI +P+ IQ A+P L + D ++ TGSGKTLAYLLP++Q LK E G +S RPRAL+L PTREL Q+++V KALSH K S ++GG D G QR +L +DV+V +P R++QH EK H+++ V VV+DE DTM GFGP++K ++ + TK + + ++ +AT+T AV+KL+ D+ FP R +++ H+ + RH L +K+ LLL VV + G+R+MIF NT+ASCRA +H L E L + CYHGD+ +ER AA+ +F + LVCTD+A+RGLD+P V+HVV FDFPLNPI+YLHR+GRTAR GA G++TSL+TK D+VLA ++ A+ +GLPLDALS+ + + + + G K KH+ G ++++SG Sbjct: 62 ASFGVLGVTAELQAALAEKGISEPTEIQAAAVPALLHDRSSDFMLASHTGSGKTLAYLLPVVQILKESELAGGATAKSRRPRALVLGPTRELTDQILQVAKALSHAAKFRSAVVNGGSDMGGQREQLERPLDVLVGTPQRVMQHAEKSHLYYGDVEVVVLDEADTMFDRGFGPEVKAILAAVRTKP--EPARCVLVSATMTKAVRKLIEDD--FPGMRQVETSSLHRGVAGARHTFLPMPPNANKLDLLLQVVEGEHRRGKRLMIFANTLASCRAADHFLSERGLQTACYHGDVPVEERRAAMTEFAAADGERPPLLVCTDLAARGLDIPGRVDHVVNFDFPLNPIDYLHRTGRTARAGATGRITSLVTKGDRVLAERIEEALQRGLPLDALSSDRAVLPQHMRPKKETLQRKGLERKAEKHSNKGVRGAGRVERTSSG 496
BLAST of NO03G04210 vs. NCBI_GenBank
Match: XP_019174996.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 39 isoform X1 [Ipomoea nil]) HSP 1 Score: 339.7 bits (870), Expect = 1.900e-89 Identity = 185/407 (45.45%), Postives = 263/407 (64.62%), Query Frame = 0 Query: 130 GNNNALDLAEFRRLGLGEEVLEGLRAMGIKDPSVIQRIAIPPALKGEDIAFSAATGSGKTLAYLLPIMQRLKWQEAQEGYARQSCRPRALILVPTRELVTQVVEVTKALSHVVKLSSCGLHGGDDFGVQRRRLGGMVDVVVASPGRLLQHYEKGHVFFSQVTNVVVDEMDTMLKDGFGPDLKRLMVPLETKSKR---DKIQYLMATATLTPAVKKLMVDEGNFPKTRFLQSEDAHKSLPTMRHIMLDTKGGD-KVQLLLDVVSQSRQNGERVMIFCNTVASCRATEHALREVALSSVCYHGDMRSDERAAALEKFK--TGEISFLVCTDIASRGLDMPFVEHVVMFDFPLNPIEYLHRSGRTARMGAKGKVTSLLTKRDKVLASAVQTAVAKGLPLDALS--ARKRD 529 G N A++ + F LGL EEV+ L M I P+ IQ I IP L+G+ + + TGSGKTLAYLLPI+Q L+ E G + RPRA++L PTREL QV V K++SH + S + GG Q L +D+VV +PGR+LQH E+G++ + + VV+DE DTM GFGPD+++ + PL+T++ + Q ++ TAT+T AV+KL+ +E F L++ HK + + RH + G + K++ LL V+ S G RVM+FCNT+ S RA +H L E +S+V YHG++ +++R LEKFK G+ LVCTD+A+RGLD+ V+HV+MFDFP N I+YLHR+GRTARMGAKGKVTSL+ KRD +LA+ ++ A+ K L++LS + KRD Sbjct: 115 GKNKAVEASSFEELGLSEEVMGALEEMNISLPTEIQAIGIPAVLRGKSVVLGSHTGSGKTLAYLLPIVQLLRRDEELYGILMKPRRPRAVVLCPTRELCEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNSPIDMVVGTPGRVLQHIEEGNLVYGDIRYVVLDEADTMFDRGFGPDIRKFLRPLKTRAAKVDDQGFQTVLVTATMTKAVQKLVDEE--FQGIEHLRTSSFHKKIASARHDFIRLSGSENKLEALLQVLEPSLSKGNRVMVFCNTLNSSRAVDHFLTENQISTVNYHGEVPAEQRVENLEKFKRDDGDCPTLVCTDLAARGLDLD-VDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVAKRDLLLATKIEEALKKNESLESLSVDSIKRD 518 The following BLAST results are available for this feature:
BLAST of NO03G04210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G04210 ID=NO03G04210|Name=NO03G04210|organism=Nannochloropsis oceanica|type=gene|length=2007bpback to top protein sequence of NO03G04210.1 >NO03G04210.1-protein ID=NO03G04210.1-protein|Name=NO03G04210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=627bpback to top Synonyms
Publications
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