NO03G04170, NO03G04170 (gene) Nannochloropsis oceanica

Overview
NameNO03G04170
Unique NameNO03G04170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1954
Alignment locationchr3:1206840..1208793 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1206840..1208793 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO03G04170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL066nonsL066Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR048ngnoR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G04170.1NO03G04170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G04170.1NO03G04170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G04170 ID=NO03G04170|Name=NO03G04170|organism=Nannochloropsis oceanica|type=gene|length=1954bp
ATGACTGAGCCGGAGTTATATTTAGCCTTGGACGATTTTGTAAACAAGAA
CACGACGAGTGCGATTAGCGACGTGGTAGACGTGGCGTTGGAAGAGACGA
GGAGGGAGTGGAAACGGAACCCGGGGATGGAGGTTGGGGAGGTGGGGGGT
ATGCTGGCCGCCATGGCTGCGGTGCAGGAGAAGAGACGGAGGAAGGCAGA
TGGGAGAGGAGTGAAATCTCGAAAAGCTGCTCAGGAAGGGAACGAGGCAG
GGGCCGGGTTGAAGAGGATGAGGGGGGGGGTGAGTGATGAGGAAGAGGGA
GAGGAGAGCAGTGAGGTGAGCGGCCGAGGGGCGGCAGCGGTGGCGGCGAA
GAGGAAGGATAAGGTGGCTGCAACAGCAGCTTCTGGCAAAAGGGGAGAAA
GAGATCGCGCGGGCAGCACGAGGAACGAAGAGGAGGACGAAGAGGAGGGC
GACGACGACGATGAGGACGAGGATGCAATGACATATTTGAGCAGCAGGAG
CCATGGTGgtgggaggggggggggcgtaagccagcagcagcagcagcagc
agctaaaaagaagccgccgttggctccagCCAATGGTAAGGGATGGGCGA
GCCGGAAAAAAGCTGAAGAACATGGGGAGGAAGAGGAGGACGTGGTCGAT
ATTGCTGGTGATTCTGATTCGGATGTCATTGAGATGGTGGAGCCGAAGCA
AGGAGGAGGAAGGGGAGGGAGGGGGGGAGGGAAAGGGGGAGGGCGAGTGG
CGGCTTCGGCGGCAACCAAAAAGCGAAAGAAAGCCGTGGCCCCTTCGGAA
GGTGACAAGGAGAAGGTGGAGGAAGAGGAGGGGGTGGAGGAAGAGGAGGA
GGACGACGACGAGGTGGACTCAGATTCGTTCCACGAGGGTGGTGGATCGA
GCAATTGCGACAACGAGGACGACAACGACAGTGACAGCTACGATGATGGG
GAGGGAAGGCGATCAAAGGGGAGGGGGGATAGGAAAGCCCCCGCCAAGAA
GGCCACAACTGCCAAGGGCCGAGGGAAGGTTATGGCCCCCCCAGTGAAGC
GCGGGAAGACACTTGTTGCTGCTACTCCGACGAAGGTGGGAGGGAAGGGA
TCGACGGCAGCAGCAGCAGCAACCTTACGCGTGATTCCTTCTTGGCAGAC
GTCCCAGAGGAGTCAGCTGTCGTCTTTAGCGGCCATAGATGGTGGTGGTG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAATAAGCGAGTAGGA
GAGGGAGGGCGAGAAGGAGGGGGGAGGAAGGCCAAGACGGGAGGGGTTGG
GGGAGCGACCGGTGAAGTGGTGGCAGTGGAGGATCAAGACATGGATTTTG
ACTTGGAGATGTTGTCGAGAAATCCATGAAAGGAAGGAAAGGGATAGATG
GGAGGCGGAGAAGGGGAAAGTCCCGGATTTAATGAAAGGCAGTTTGTGAG
TAGACAAGGAGGGAGGAAAGAGGGGGGCGTAGCGGTGAGAGGTAAGTAGA
TAATAGATAAGATCCTTTGTCTCTGCCTGTGTGAATCTGCGTGACTGTGT
GTCTGTGTGCATGTTTTCGTGTCGAGGGGAAGGAAGGGAAGCGAGAGGAA
GAAAAGGGAGAGGAAAAGAGTACGTGCCGAAGCCATGCTGAGAGAGTGTT
AATTGCGAACACACGAGAGGAGCAAGCGATCAATAGATGGGAAGGAAGGG
GGGGAGAGCTGAAGAGGGGTAGGAGAAGAGAGAAGGGGGAAGAGCATGGA
CGAAGTACAAATAGCAGTCATAACGCCTACATTCCATCAAGCGGGTTGCA
TCGAAGCCTAGCCCTGTATGGGCAGCGGAGATACGAGCATTAGGAGGATG
GAAAGTAAGAAACGAATCAGTTAACAAGCAATTAAAAGCACACACGCACG
TCGAATCCATTCGAGAGAAAAGATGAAAAGAACGAATAATAGGACAAAAA
CGAG
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protein sequence of NO03G04170.1

>NO03G04170.1-protein ID=NO03G04170.1-protein|Name=NO03G04170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=436bp
MTEPELYLALDDFVNKNTTSAISDVVDVALEETRREWKRNPGMEVGEVGG
MLAAMAAVQEKRRRKADGRGVKSRKAAQEGNEAGAGLKRMRGGVSDEEEG
EESSEVSGRGAAAVAAKRKDKVAATAASGKRGERDRAGSTRNEEEDEEEG
DDDDEDEDAMTYLSSRSHGANGKGWASRKKAEEHGEEEEDVVDIAGDSDS
DVIEMVEPKQGGGRGGRGGGKGGGRVAASAATKKRKKAVAPSEGDKEKVE
EEEGVEEEEEDDDEVDSDSFHEGGGSSNCDNEDDNDSDSYDDGEGRRSKG
RGDRKAPAKKATTAKGRGKVMAPPVKRGKTLVAATPTKVGGKGSTAAAAA
TLRVIPSWQTSQRSQLSSLAAIDGGGGGGGGGGGGGGGNKRVGEGGREGG
GRKAKTGGVGGATGEVVAVEDQDMDFDLEMLSRNP*
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Synonyms
Publications