NO03G04140, NO03G04140 (gene) Nannochloropsis oceanica

Overview
NameNO03G04140
Unique NameNO03G04140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1358
Alignment locationchr3:1200735..1202092 +

Link to JBrowse

Properties
Property NameValue
DescriptionPheromone shutdown, TraB
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1200735..1202092 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002816Pheromone_shutdown_TraB
Homology
BLAST of NO03G04140 vs. NCBI_GenBank
Match: EWM29877.1 (Pheromone shutdown, TraB [Nannochloropsis gaditana])

HSP 1 Score: 408.3 bits (1048), Expect = 2.700e-110
Identity = 228/340 (67.06%), Postives = 253/340 (74.41%), Query Frame = 0
Query:  113 TAASPTTPVVKGNGVCNDAISHLRNPKTGQDIYMIGTAHISNESAILVRSTIRALRPQTVMLELDASRIGR------------------------------------------------------------------EGKKGFLKAALGELTRAGSNFREKLIGVGAVVVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGADLLLGDQNVQVTLRRLSDALSKSELVKVREMESPTRSPAARELEARGIKMGGNDKAELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSASLLGCKSKVIVGVVGIGHLDGIERNLGREGFVSVPCR 387
            T   P+   +K +G+C+DAISHLRNPKTGQDIYMIGTAHISN SA+LVRSTIR LRPQTVMLELDASRIGR                                                                  EGK GFL+AALGELTR GS FRE+L+G+GA+VVGQVISGLYRGLDKMGFVSGQEFIVA++EGRKVGADLLLGDQ+VQVTLRRLSDALS+SEL KVREMESPTRSPAARELEARGI+MG N  A+++VA+EALKER+SVR LM++LQ ELPEVYKAMIEERDAYM+ASLLGC S+ IVGVVGIGHLDGIERNLGREGFV VPCR
Sbjct:  107 TLQPPSQASLKPSGLCDDAISHLRNPKTGQDIYMIGTAHISNASALLVRSTIRELRPQTVMLELDASRIGRLAKNTSNSIPKPSSMGRSEPSRRVVIVASSSSDSPDVPPATFVIPGPASTALQPPPSDPGFLSKQEEGKAGFLRAALGELTRVGSGFRERLVGLGAMVVGQVISGLYRGLDKMGFVSGQEFIVAIDEGRKVGADLLLGDQDVQVTLRRLSDALSRSELGKVREMESPTRSPAARELEARGIRMGDN-AADISVAMEALKERSSVRTLMASLQQELPEVYKAMIEERDAYMTASLLGCGSQTIVGVVGIGHLDGIERNLGREGFVRVPCR 445          
BLAST of NO03G04140 vs. NCBI_GenBank
Match: CBJ28478.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 169.5 bits (428), Expect = 2.100e-38
Identity = 104/285 (36.49%), Postives = 160/285 (56.14%), Query Frame = 0
Query:  127 VCNDAISHLRNPKTGQDIYMIGTAHISNESAILVRSTIRALRPQTVMLELDASRIG------REGKKG-------------------FLKAALGELTRAGSNFREKLIGVGAVVVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGADLLLGDQNVQVTLRRLSDALSKSELVKVREMESPTRSPAARELEARGIKMGGNDKAELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSASLLGCKSK-VIVGVVGIGHLDGIERNLGREGFVSVPC 386
            +C+DA+S+L NP    +++++GTAHISN SA LV + IR ++PQ VM+ELDA R+G      ++G+K                    F  A   +L     +  +++    A  +G+ IS +Y  +D+ G  SGQEF +A+ E R  GA LLLGD++V++TLRRLS+AL   +L   +E+    +      LEA    + G+    +  +++ LK R ++R ++   + E PE+Y AMI ERD  M+ +L+G   K V V VVG+ H+DGIE  L   G+ S  C
Sbjct:   62 LCDDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRVGSFMEPPKQGEKALADGTGKEISPPAERTRNPFFGAFFKQLLDPNVSVNDRITEFFAAALGKAISKMYESMDQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEALRSIDL---QEISQSGQMETGLGLEA----LDGSSVESINSSLDILKNRETMRKVVGFYKEEAPELYNAMIGERDKVMAVNLMGLDGKQVTVAVVGLAHVDGIEGILMANGWKSQRC 339          
BLAST of NO03G04140 vs. NCBI_GenBank
Match: GAX10082.1 (hypothetical protein FisN_2Lh351 [Fistulifera solaris])

HSP 1 Score: 156.8 bits (395), Expect = 1.400e-34
Identity = 107/328 (32.62%), Postives = 164/328 (50.00%), Query Frame = 0
Query:  111 LPTAASPTTPVVKGNGVCNDAISHLRNPKTGQDIYMIGTAHISNESAILVRSTIRALRPQTVMLELDASRIGREG----KKGFLKAALGELT------------------------------------------RAG--SNFREKLIGVGAVVVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGADLLLGDQNVQVTLRRLSDALSKSELVKVREMESPTR------SPAARELEARGIKMGGNDKAELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSASLLGCKS-KVIVGVVGIGHLDGIERNLGREGFVSV 384
            LP+ +  +T VV    VC+  +S  + P   + +Y++GTAHIS  SA L R  +R + P  V +ELD  R+        ++  LK ++ ++T                                          R G     R+K + VGA VVG  + G+Y+ L   GF  G+EF  A+ E +K GAD++LGDQ+VQ+TLRRL+ AL+ ++L K+ +    ++         A EL   G+ M    K EL   VE++K R +VRA+M+ L+   P + + M+ ERDAYM+  +      + IV V+GI H+DG+E NL   G+  V
Sbjct:   77 LPSPSFASTAVVSSKAVCDSTVSVWKEPNRNRLVYILGTAHISKVSADLARQLVRDVHPNAVFVELDLKRVNGVAQYVQQQQDLKDSIEQVTLPPGTRNMPLAPLAADTPPKQSTVIVPVPTTPIASEETPPSPRRGLFGGLRQKALSVGAQVVGSAVRGMYQNLGDQGFSPGEEFAAAIMEAQKQGADVILGDQDVQITLRRLTQALASTDLSKLNDDALSSKFSDLMGGGKAMELPPSGV-MDDKYKEELTKMVESMKNRENVRAIMTELKEVAPALAQVMLTERDAYMATGIDTLNQFECIVAVMGIAHMDGVENNLKGRGWTQV 403          
BLAST of NO03G04140 vs. NCBI_GenBank
Match: XP_009038090.1 (hypothetical protein AURANDRAFT_64860 [Aureococcus anophagefferens] >EGB07478.1 hypothetical protein AURANDRAFT_64860 [Aureococcus anophagefferens])

HSP 1 Score: 156.0 bits (393), Expect = 2.400e-34
Identity = 101/266 (37.97%), Postives = 154/266 (57.89%), Query Frame = 0
Query:  127 VCNDAISHLRNPKTGQDIYMIGTAHISNESAILVRSTIRALRPQTVMLELDASRIGREGKKGFLKAALGELT-RAGSNFREKLIGVGAVVVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGADLLLGDQNVQVTLRRLSDALSKSELVKVREMESPTRSPAARELEARGIKMGGNDKAELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSASLL-----GCKSKVIVGVVGIGHLDGIERNLGREGFVSVPCR 387
            +C++A+S L N K+   +Y++GTAH+S+ SA LV  TI A+RP  VM+ELD  R+     +GF   A G  T  A +   ++L   GA VVG V+  LY+ L+++G  +G+EF VA+ + R  G  +LL D++V  TLR + DA+ K+    +   E+   SPA      R + +   D   +A  VE +K+R +VR +++ L++  P +Y A+++ RDAYM+ASLL         + +V VVG+ H DGI R L   GF   P R
Sbjct:   52 LCDEAVSALANGKS--TVYLVGTAHVSDVSARLVAETIDAVRPTLVMVELDGKRV-----QGFGGEAPGPATPLAPAPVGQRL---GAFVVGAVLRSLYKSLERLGLDTGEEFAVALRKARSAGVPVLLADRDVDETLRLVGDAVRKTTSKDLENFEA-ALSPALAGDLTRAVDVASRD--SVASTVELVKKRETVRTIVAALEANAPALYDALVDSRDAYMAASLLDRLGAAGPGQRVVAVVGMAHEDGIARRLAARGFAPAPRR 304          
BLAST of NO03G04140 vs. NCBI_GenBank
Match: GAX26702.1 (hypothetical protein FisN_2Hh351 [Fistulifera solaris])

HSP 1 Score: 151.8 bits (382), Expect = 4.500e-33
Identity = 103/325 (31.69%), Postives = 161/325 (49.54%), Query Frame = 0
Query:  111 LPTAASPTTPVVKGNGVCNDAISHLRNPKTGQDIYMIGTAHISNESAILVRSTIRALRPQTVMLELDASRIGREG----KKGFLKAALGELTRAG-----------------------------------------SNFREKLIGVGAVVVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGADLLLGDQNVQVTLRRLSDALSKSELVKVREMESPTR------SPAARELEARGIKMGGNDKAELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSASLLGCKS-KVIVGVVGIGHLDGIERNLGREGFVSV 384
            LP+  + +T VV    VC+  +S  + P   + +Y++GTAHIS  SA L    +R + P  V +ELD  R+        ++  LK ++ ++T                                             + R+K + VGA VVG  + G+Y+ L   GF  G+EF  A+ E +K GAD++LGDQ+VQ+TLRRL+ AL+ ++L K+ +    ++         A EL   G+ M    K E    VE++K R +VRA+M+ L+   P + + M+ ERDAYM+  +      + IV V+GI H+DG+E NL   G+  V
Sbjct:   77 LPSPVAASTAVVSSKAVCDSTVSVWKEPNRNRLVYILGTAHISKVSADLAGQLVRDVHPNAVFVELDLKRVDGVAQYVKQQQDLKDSIEQVTLPPGTSNTSLEANNPPKQSTVIVPVPTPPVATEKTAPSQPRGLFGDLRQKALNVGAQVVGSAVRGMYQNLGDQGFSPGEEFAAAIMEAQKQGADVILGDQDVQITLRRLTQALASTDLSKLNDDALSSKFSDLMGGGKAMELPPSGV-MDDIYKEEFTKMVESMKNRENVRAIMTELKEVAPALAQVMLTERDAYMATGIDTLNQFECIVAVMGIAHMDGVENNLRGRGWTQV 400          
BLAST of NO03G04140 vs. NCBI_GenBank
Match: CEL93085.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 148.7 bits (374), Expect = 3.900e-32
Identity = 100/273 (36.63%), Postives = 153/273 (56.04%), Query Frame = 0
Query:  127 VCNDAISHLRNPKTGQDIYMIGTAHISNESAILVRSTIRALRPQTVMLELDASRI----GRE-------GKKGFLKAALGEL----TRAGSNFREKLIGVGAVVVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGADLLLGDQNVQVTLRRLSDALSKSELVK-VREMESPTRSPAARELEARGIKMGGND-----KAELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSASLLGCKSKVIVGVVGIGHLDGIERNLGRE 379
            +C++ ++ LR+ +TG+++ ++GTAHIS  SA LV+S I   RP  V +ELD SR     G +        + G+L+ A+G+L     R   ++ +K   V A V+G  I  LY+ + K GF  G+EF+VA  E  ++ A+L+LGD+ V+ TLRRLSDAL+   L   ++ +E+   SP   +          ND       +L   VE +K+ A    +  + +  LPEVY  MI+ERD YM+A +       +V VVG+GH+ GI +NLG E
Sbjct:   65 LCDETVAILRDRQTGREVVLVGTAHISTVSANLVKSIIDETRPTAVFVELDKSRFRLPDGNDAAPQVGSARPGWLQ-AMGQLRNIILRPDVSWSDKWRDVNAAVIGYAIGNLYQTIAKQGFKPGEEFLVAALEADRLNAELILGDRPVRTTLRRLSDALNSIGLNDLLKRLETIEFSPRVMDALTEAGVGDPNDIDQLTPEQLRSLVEVIKQPAVAEEMFESFKDALPEVYTVMIQERDEYMAARIRESDQPRMVAVVGLGHMKGIIKNLGYE 336          
BLAST of NO03G04140 vs. NCBI_GenBank
Match: XP_002182865.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45601.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 139.8 bits (351), Expect = 1.800e-29
Identity = 104/346 (30.06%), Postives = 168/346 (48.55%), Query Frame = 0
Query:  114 AASPTTPVVKGNGVCNDAISHLRNPKTGQDIYMIGTAHISNESAILVRSTIRALRPQTVMLELDASRIG------------------------------------------------------------------REGKKGFLKAALGELTRAGSNFREKLIGVGAVVVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGADLLLGDQNVQVTLRRLSDALSKSELVKVREMESPTRSPAARELEARGIK--MGGND----------KAELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSASLLGCKS-KVIVGVVGIGHLDGIERNLGREGF 381
            A +P   +V     C+  +S  +  +  + +Y++GTAHIS  S+ L    ++ + P  V +ELD  R+                                                                   ++ +       L E  R G    ++++G GA  VG+ I G+Y+ L+  GF  G+EF+VA+ EG+++GAD++LGDQ+V+VTLRR++ AL++++L K+ + +S        ELE RG++  MG +D          K+EL+  VE +K R SVR +M+ LQ   P + + M+ ERDAYM+A L      +VI  V+GI H+DG+ERNL  +G+
Sbjct:   89 AFAPAPSIVTTAATCDTTVSVWQ--RGDRIVYILGTAHISEISSDLAGQLVKDVHPSAVFVELDLKRVSGVTVSPGTPVTSRLPISTDVTELPATGEGASTKQSKIIVSVPALPDSVASRPTESTGIASLAATTKQDDELASASPVLTESPRRG--LGQRMLGFGAAAVGKAIQGMYKNLNDSGFKPGEEFVVAVREGQRIGADIVLGDQDVEVTLRRMTQALAQTDLNKLLDPDS--------ELE-RGMRELMGDSDPSLASSPDAFKSELSTYVENMKTRDSVRKIMAQLQKVAPALVQVMLTERDAYMAAGLDTLNQFEVITAVMGIAHMDGVERNLQSQGW 421          
BLAST of NO03G04140 vs. NCBI_GenBank
Match: OEU22926.1 (hypothetical protein FRACYDRAFT_233089 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 139.8 bits (351), Expect = 1.800e-29
Identity = 109/337 (32.34%), Postives = 156/337 (46.29%), Query Frame = 0
Query:  121 VVKGNGVCNDAISHLRNPKTGQDIYMIGTAHISNESAILVRSTIRALRPQTVMLELDASRIGREGKKGFLKAALGELTRAGS--NFREKLIGVGAV-----------------------------------------------------VVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGADLLLGDQNVQVTLRRLSDALSK----------SELVKVRE-MESPTRSPAARELEARGIKMGGNDK--------AELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSASLLGCKS-KVIVGVVGIGHLDGIERNLGREGFVS 383
            +V    VC+  +S  +  K G+ IY++GTAHIS+ SA L    IR  +P+ V +ELD  R+   G         G     GS    RE  + V  +                                                      VG+ I GLY+ LD  GF SG+EF+ A++EGRK+GAD++LGD++V+VTLRR+++ L+K          SEL +  E M  P     A+        +GG++K         EL   VE +K + +VR +M  LQ   P +Y+A++ ERD YM+  L G    + IV VVGI H DGIE +L   G+ S
Sbjct:   77 IVTSKSVCDPTVSVWK--KNGRIIYLLGTAHISSSSAALAGQLIRDSQPKGVFIELDPKRVSGTGVLAQKMNNDGSENGGGSAPTIRESKVIVPQISAVEGDGGLSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGKSIKGLYQRLDSAGFDSGEEFVTAVKEGRKIGADIILGDRDVEVTLRRVTEGLAKTDLKALLSPDSELERTLEGMSLPNPKAQAKLSGQSSSSVGGDEKELSDEQFREELTSFVETMKTKDNVRTIMGQLQRVAPFLYEALVSERDVYMATGLNGLNDIESIVAVVGIAHADGIENSLQMNGWKS 411          
BLAST of NO03G04140 vs. NCBI_GenBank
Match: XP_002291881.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90732.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 135.6 bits (340), Expect = 3.400e-28
Identity = 107/361 (29.64%), Postives = 170/361 (47.09%), Query Frame = 0
Query:  107 QAATLP-TAASPTTPVVKGNGVCNDAIS-HLRNPKTG-QDIYMIGTAHISNESAILVRSTIRALRPQTVMLELDASRIGREGKKGFLKA-----------------------------------------ALGELTRAGSNFREKLIGVGAVVVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGADLLLGDQNVQVTLRRLSDALSKSELVKVREMESPTRSPAARELEARGIK------MGGN------------------------DKAELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSASL----LGCKSKV--IVGVVGIGHLDGIERNLGREGF--VSVPC 386
            QAAT    A+  +T  +  N +C+ ++S  ++   T  + I+++GTAHIS+ SA L  + +R L+P  V +ELDA R+ R    G  ++                                              T    + + KL+ VG+  VG  + G+Y  L+  GF +G EF +++ EG  +G+ ++LGD++V+VTLRRL+ AL+K+++ K+    S     +  EL    +K       GGN                        DK E    VE +K + +V+ +M  L+   PE+Y+AM+ ERD YM+  L    +    KV   V VVG+ H+DGIER L  +G+  +S PC
Sbjct:  136 QAATATFNASKQSTSTLVSNTLCDPSVSTWVKTDATSMRTIHILGTAHISSASAELAGTMVRELKPDVVFVELDAKRVARAIPGGVSRSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSNPFDVQAKLVNVGSKYVGDAVKGMYGKLESEGFKAGDEFAMSVREGLAIGSTIVLGDRDVEVTLRRLTQALAKTDIRKLLSANSEVER-SMEELLPDNMKNQLKQTSGGNTVSNNVGDASINVSSMGFEGDMAIDKQEFQTFVETMKAKENVKKIMKALEKTAPEIYQAMVAERDVYMAMGLDELSVNVNGKVDNTVAVVGMAHVDGIERYLASQGWQALSYPC 495          
BLAST of NO03G04140 vs. NCBI_GenBank
Match: PSC74329.1 (conjugal transfer [Micractinium conductrix])

HSP 1 Score: 135.2 bits (339), Expect = 4.400e-28
Identity = 88/246 (35.77%), Postives = 134/246 (54.47%), Query Frame = 0
Query:  135 LRNPKTGQDIYMIGTAHISNESAILVRSTIRALRPQTVMLELDASRIGREGKKG-----FLKAALGELTRAGSNFREKLIGVGAVVVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGADLLLGDQNVQVTLRRLSDALSKSELVKVREMES-PTRSPAARELEARGIKMGGNDKAELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSASLLGCKSKVIVGVVGIGHLDGIERN 375
            LRN   G +I+++GTAH+S +SA  VR  IR +RP TVMLEL + R+ R    G      LK+ +G     G    +K++  G  +V       YR +  +G   G EF  A+EE  ++GA ++ GD++VQ TL+RLS  ++  +L+++      P   P   E  AR         + +   VE +K RA VR +   L+   P + + MI+ERD +M  +L   + +V VGVVG+ HLDG+ER+
Sbjct:   79 LRNLHNGAEIFLVGTAHVSKQSAEEVREMIRLVRPSTVMLELCSGRLARLRSGGTSDAELLKSMMGTFAAPGGTMSQKVVQAGLPLV-------YRAMKALGMDPGAEFKAAVEEAERIGARIVCGDRDVQQTLQRLSQTVNFQDLMRMMTGRGLPDPPPGMAEFYAR------QSGSSIETKVEGMKTRAMVREMAEYLRQVNPRLAEVMIDERDQHMVDALARLEGRV-VGVVGLAHLDGMERS 310          
The following BLAST results are available for this feature:
BLAST of NO03G04140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29877.12.700e-11067.06Pheromone shutdown, TraB [Nannochloropsis gaditana... [more]
CBJ28478.12.100e-3836.49conserved unknown protein [Ectocarpus siliculosus][more]
GAX10082.11.400e-3432.62hypothetical protein FisN_2Lh351 [Fistulifera sola... [more]
XP_009038090.12.400e-3437.97hypothetical protein AURANDRAFT_64860 [Aureococcus... [more]
GAX26702.14.500e-3331.69hypothetical protein FisN_2Hh351 [Fistulifera sola... [more]
CEL93085.13.900e-3236.63unnamed protein product [Vitrella brassicaformis C... [more]
XP_002182865.11.800e-2930.06predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OEU22926.11.800e-2932.34hypothetical protein FRACYDRAFT_233089 [Fragilario... [more]
XP_002291881.13.400e-2829.64predicted protein [Thalassiosira pseudonana CCMP13... [more]
PSC74329.14.400e-2835.77conjugal transfer [Micractinium conductrix][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL066nonsL066Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR048ngnoR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005464NSK005464Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G04140.1NO03G04140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572873gene_1610Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100106g22gene774Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G04140.1NO03G04140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G04140 ID=NO03G04140|Name=NO03G04140|organism=Nannochloropsis oceanica|type=gene|length=1358bp
ATGCGTCCATCATCATCGTGGTCCGCAGTAGTCCTCCTACCAATAGCAGT
GGCGGCGCTGTTGATAGTCCCAACCGAGACATTTTTCTTGGGGTCCAAGA
CCAGCTTCACGACCTCCCCACCCCATGCCCTGGCATCTCGAACAAGAAGG
ATGGTCGCGAACGTGGCCATGCAGGAGCAGGAAGAGACGACAAAGGTGAC
AAGCAGAGCAAAGGAGGTCACTACTGCTCACCGCCGGGCAGTTTTTGCCA
CGACCGCAGGCGCGCTGACCTCCTCCTGGCTGCTTTCCTCGTCCTCCTCA
TCCTCGCCCAACAAGGGCCAGGCAGCCACCCTGCCCACGGCAGCCTCGCC
CACTACACCAGTTGTTAAGGGCAATGGGGTTTGTAATGATGCTATCTCCC
ACCTCCGCAACCCCAAAACGGGACAAGACATCTATATGATCGGCACTGCG
CATATCAGCAATGAAAGTGCCATCCTTGTCCGCTCCACCATCAGGGCCCT
CCGTCCACAAACTGTTATGCTTGAGCTCGACGCCAGCCGCATCGGCCgtc
ttgccagcgccgacaacagcacttcagttcctccatcttctccgtcggca
tccaccaccatcaccgcctccagcgccacccaagatccttccctccctcc
catcaaatttatcatccctcccccccccttggctccatccttccccccac
caacgccccctccctccttcccaaacaagGTGAAGGGAAAAAAGGCTTTC
TCAAAGCCGCTCTGGGGGAGCTGACGCGCGCAGGGAGCAATTTTCGCGAG
AAATTGATAGGTGTGGGTGCAGTGGTGGTGGGACAGGTTATTTCGGGTCT
GTATAGAGGCTTGGATAAAATGGGATTTGTGTCTGGACAGGAATTTATTG
TGGCAATGGAGGAGGGGAGAAAGGTAGGTGCGGATCTGTTGCTCGGAGAT
CAGAATGTGCAGGTGACGTTGAGGAGGCTTTCGGATGCCTTGTCGAAGAG
CGAATTGGTAAAGGTCCGGGAGATGGAATCGCCTACGCGTTCTCCGGCGG
CAAGAGAGTTGGAAGCACGAGGGATTAAGATGGGGGGGAATGATAAGGCG
GAATTAGCGGTGGCGGTTGAGGCGTTAAAGGAGCGGGCGTCGGTGCGCGC
GTTGATGAGTACGTTGCAGAGTGAGTTGCCCGAGGTTTATAAGGCGATGA
TAGAGGAGAGAGATGCGTATATGAGTGCGAGTTTGTTGGGATGTAAGAGT
AAGGTGATTGTGGGGGTGGTAGGCATCGGGCACCTGGATGGGATCGAGCG
CAATTTGGGGAGAGAGGGTTTTGTGAGCGTGCCGTGTCGTCTTGCACAGG
GGCAGTAA
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protein sequence of NO03G04140.1

>NO03G04140.1-protein ID=NO03G04140.1-protein|Name=NO03G04140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=392bp
MRPSSSWSAVVLLPIAVAALLIVPTETFFLGSKTSFTTSPPHALASRTRR
MVANVAMQEQEETTKVTSRAKEVTTAHRRAVFATTAGALTSSWLLSSSSS
SSPNKGQAATLPTAASPTTPVVKGNGVCNDAISHLRNPKTGQDIYMIGTA
HISNESAILVRSTIRALRPQTVMLELDASRIGREGKKGFLKAALGELTRA
GSNFREKLIGVGAVVVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGA
DLLLGDQNVQVTLRRLSDALSKSELVKVREMESPTRSPAARELEARGIKM
GGNDKAELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSAS
LLGCKSKVIVGVVGIGHLDGIERNLGREGFVSVPCRLAQGQ*
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