NO03G04140, NO03G04140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G04140 vs. NCBI_GenBank
Match: EWM29877.1 (Pheromone shutdown, TraB [Nannochloropsis gaditana]) HSP 1 Score: 408.3 bits (1048), Expect = 2.700e-110 Identity = 228/340 (67.06%), Postives = 253/340 (74.41%), Query Frame = 0 Query: 113 TAASPTTPVVKGNGVCNDAISHLRNPKTGQDIYMIGTAHISNESAILVRSTIRALRPQTVMLELDASRIGR------------------------------------------------------------------EGKKGFLKAALGELTRAGSNFREKLIGVGAVVVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGADLLLGDQNVQVTLRRLSDALSKSELVKVREMESPTRSPAARELEARGIKMGGNDKAELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSASLLGCKSKVIVGVVGIGHLDGIERNLGREGFVSVPCR 387 T P+ +K +G+C+DAISHLRNPKTGQDIYMIGTAHISN SA+LVRSTIR LRPQTVMLELDASRIGR EGK GFL+AALGELTR GS FRE+L+G+GA+VVGQVISGLYRGLDKMGFVSGQEFIVA++EGRKVGADLLLGDQ+VQVTLRRLSDALS+SEL KVREMESPTRSPAARELEARGI+MG N A+++VA+EALKER+SVR LM++LQ ELPEVYKAMIEERDAYM+ASLLGC S+ IVGVVGIGHLDGIERNLGREGFV VPCR Sbjct: 107 TLQPPSQASLKPSGLCDDAISHLRNPKTGQDIYMIGTAHISNASALLVRSTIRELRPQTVMLELDASRIGRLAKNTSNSIPKPSSMGRSEPSRRVVIVASSSSDSPDVPPATFVIPGPASTALQPPPSDPGFLSKQEEGKAGFLRAALGELTRVGSGFRERLVGLGAMVVGQVISGLYRGLDKMGFVSGQEFIVAIDEGRKVGADLLLGDQDVQVTLRRLSDALSRSELGKVREMESPTRSPAARELEARGIRMGDN-AADISVAMEALKERSSVRTLMASLQQELPEVYKAMIEERDAYMTASLLGCGSQTIVGVVGIGHLDGIERNLGREGFVRVPCR 445
BLAST of NO03G04140 vs. NCBI_GenBank
Match: CBJ28478.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 169.5 bits (428), Expect = 2.100e-38 Identity = 104/285 (36.49%), Postives = 160/285 (56.14%), Query Frame = 0 Query: 127 VCNDAISHLRNPKTGQDIYMIGTAHISNESAILVRSTIRALRPQTVMLELDASRIG------REGKKG-------------------FLKAALGELTRAGSNFREKLIGVGAVVVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGADLLLGDQNVQVTLRRLSDALSKSELVKVREMESPTRSPAARELEARGIKMGGNDKAELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSASLLGCKSK-VIVGVVGIGHLDGIERNLGREGFVSVPC 386 +C+DA+S+L NP +++++GTAHISN SA LV + IR ++PQ VM+ELDA R+G ++G+K F A +L + +++ A +G+ IS +Y +D+ G SGQEF +A+ E R GA LLLGD++V++TLRRLS+AL +L +E+ + LEA + G+ + +++ LK R ++R ++ + E PE+Y AMI ERD M+ +L+G K V V VVG+ H+DGIE L G+ S C Sbjct: 62 LCDDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRVGSFMEPPKQGEKALADGTGKEISPPAERTRNPFFGAFFKQLLDPNVSVNDRITEFFAAALGKAISKMYESMDQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEALRSIDL---QEISQSGQMETGLGLEA----LDGSSVESINSSLDILKNRETMRKVVGFYKEEAPELYNAMIGERDKVMAVNLMGLDGKQVTVAVVGLAHVDGIEGILMANGWKSQRC 339
BLAST of NO03G04140 vs. NCBI_GenBank
Match: GAX10082.1 (hypothetical protein FisN_2Lh351 [Fistulifera solaris]) HSP 1 Score: 156.8 bits (395), Expect = 1.400e-34 Identity = 107/328 (32.62%), Postives = 164/328 (50.00%), Query Frame = 0 Query: 111 LPTAASPTTPVVKGNGVCNDAISHLRNPKTGQDIYMIGTAHISNESAILVRSTIRALRPQTVMLELDASRIGREG----KKGFLKAALGELT------------------------------------------RAG--SNFREKLIGVGAVVVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGADLLLGDQNVQVTLRRLSDALSKSELVKVREMESPTR------SPAARELEARGIKMGGNDKAELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSASLLGCKS-KVIVGVVGIGHLDGIERNLGREGFVSV 384 LP+ + +T VV VC+ +S + P + +Y++GTAHIS SA L R +R + P V +ELD R+ ++ LK ++ ++T R G R+K + VGA VVG + G+Y+ L GF G+EF A+ E +K GAD++LGDQ+VQ+TLRRL+ AL+ ++L K+ + ++ A EL G+ M K EL VE++K R +VRA+M+ L+ P + + M+ ERDAYM+ + + IV V+GI H+DG+E NL G+ V Sbjct: 77 LPSPSFASTAVVSSKAVCDSTVSVWKEPNRNRLVYILGTAHISKVSADLARQLVRDVHPNAVFVELDLKRVNGVAQYVQQQQDLKDSIEQVTLPPGTRNMPLAPLAADTPPKQSTVIVPVPTTPIASEETPPSPRRGLFGGLRQKALSVGAQVVGSAVRGMYQNLGDQGFSPGEEFAAAIMEAQKQGADVILGDQDVQITLRRLTQALASTDLSKLNDDALSSKFSDLMGGGKAMELPPSGV-MDDKYKEELTKMVESMKNRENVRAIMTELKEVAPALAQVMLTERDAYMATGIDTLNQFECIVAVMGIAHMDGVENNLKGRGWTQV 403
BLAST of NO03G04140 vs. NCBI_GenBank
Match: XP_009038090.1 (hypothetical protein AURANDRAFT_64860 [Aureococcus anophagefferens] >EGB07478.1 hypothetical protein AURANDRAFT_64860 [Aureococcus anophagefferens]) HSP 1 Score: 156.0 bits (393), Expect = 2.400e-34 Identity = 101/266 (37.97%), Postives = 154/266 (57.89%), Query Frame = 0 Query: 127 VCNDAISHLRNPKTGQDIYMIGTAHISNESAILVRSTIRALRPQTVMLELDASRIGREGKKGFLKAALGELT-RAGSNFREKLIGVGAVVVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGADLLLGDQNVQVTLRRLSDALSKSELVKVREMESPTRSPAARELEARGIKMGGNDKAELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSASLL-----GCKSKVIVGVVGIGHLDGIERNLGREGFVSVPCR 387 +C++A+S L N K+ +Y++GTAH+S+ SA LV TI A+RP VM+ELD R+ +GF A G T A + ++L GA VVG V+ LY+ L+++G +G+EF VA+ + R G +LL D++V TLR + DA+ K+ + E+ SPA R + + D +A VE +K+R +VR +++ L++ P +Y A+++ RDAYM+ASLL + +V VVG+ H DGI R L GF P R Sbjct: 52 LCDEAVSALANGKS--TVYLVGTAHVSDVSARLVAETIDAVRPTLVMVELDGKRV-----QGFGGEAPGPATPLAPAPVGQRL---GAFVVGAVLRSLYKSLERLGLDTGEEFAVALRKARSAGVPVLLADRDVDETLRLVGDAVRKTTSKDLENFEA-ALSPALAGDLTRAVDVASRD--SVASTVELVKKRETVRTIVAALEANAPALYDALVDSRDAYMAASLLDRLGAAGPGQRVVAVVGMAHEDGIARRLAARGFAPAPRR 304
BLAST of NO03G04140 vs. NCBI_GenBank
Match: GAX26702.1 (hypothetical protein FisN_2Hh351 [Fistulifera solaris]) HSP 1 Score: 151.8 bits (382), Expect = 4.500e-33 Identity = 103/325 (31.69%), Postives = 161/325 (49.54%), Query Frame = 0 Query: 111 LPTAASPTTPVVKGNGVCNDAISHLRNPKTGQDIYMIGTAHISNESAILVRSTIRALRPQTVMLELDASRIGREG----KKGFLKAALGELTRAG-----------------------------------------SNFREKLIGVGAVVVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGADLLLGDQNVQVTLRRLSDALSKSELVKVREMESPTR------SPAARELEARGIKMGGNDKAELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSASLLGCKS-KVIVGVVGIGHLDGIERNLGREGFVSV 384 LP+ + +T VV VC+ +S + P + +Y++GTAHIS SA L +R + P V +ELD R+ ++ LK ++ ++T + R+K + VGA VVG + G+Y+ L GF G+EF A+ E +K GAD++LGDQ+VQ+TLRRL+ AL+ ++L K+ + ++ A EL G+ M K E VE++K R +VRA+M+ L+ P + + M+ ERDAYM+ + + IV V+GI H+DG+E NL G+ V Sbjct: 77 LPSPVAASTAVVSSKAVCDSTVSVWKEPNRNRLVYILGTAHISKVSADLAGQLVRDVHPNAVFVELDLKRVDGVAQYVKQQQDLKDSIEQVTLPPGTSNTSLEANNPPKQSTVIVPVPTPPVATEKTAPSQPRGLFGDLRQKALNVGAQVVGSAVRGMYQNLGDQGFSPGEEFAAAIMEAQKQGADVILGDQDVQITLRRLTQALASTDLSKLNDDALSSKFSDLMGGGKAMELPPSGV-MDDIYKEEFTKMVESMKNRENVRAIMTELKEVAPALAQVMLTERDAYMATGIDTLNQFECIVAVMGIAHMDGVENNLRGRGWTQV 400
BLAST of NO03G04140 vs. NCBI_GenBank
Match: CEL93085.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 148.7 bits (374), Expect = 3.900e-32 Identity = 100/273 (36.63%), Postives = 153/273 (56.04%), Query Frame = 0 Query: 127 VCNDAISHLRNPKTGQDIYMIGTAHISNESAILVRSTIRALRPQTVMLELDASRI----GRE-------GKKGFLKAALGEL----TRAGSNFREKLIGVGAVVVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGADLLLGDQNVQVTLRRLSDALSKSELVK-VREMESPTRSPAARELEARGIKMGGND-----KAELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSASLLGCKSKVIVGVVGIGHLDGIERNLGRE 379 +C++ ++ LR+ +TG+++ ++GTAHIS SA LV+S I RP V +ELD SR G + + G+L+ A+G+L R ++ +K V A V+G I LY+ + K GF G+EF+VA E ++ A+L+LGD+ V+ TLRRLSDAL+ L ++ +E+ SP + ND +L VE +K+ A + + + LPEVY MI+ERD YM+A + +V VVG+GH+ GI +NLG E Sbjct: 65 LCDETVAILRDRQTGREVVLVGTAHISTVSANLVKSIIDETRPTAVFVELDKSRFRLPDGNDAAPQVGSARPGWLQ-AMGQLRNIILRPDVSWSDKWRDVNAAVIGYAIGNLYQTIAKQGFKPGEEFLVAALEADRLNAELILGDRPVRTTLRRLSDALNSIGLNDLLKRLETIEFSPRVMDALTEAGVGDPNDIDQLTPEQLRSLVEVIKQPAVAEEMFESFKDALPEVYTVMIQERDEYMAARIRESDQPRMVAVVGLGHMKGIIKNLGYE 336
BLAST of NO03G04140 vs. NCBI_GenBank
Match: XP_002182865.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45601.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 139.8 bits (351), Expect = 1.800e-29 Identity = 104/346 (30.06%), Postives = 168/346 (48.55%), Query Frame = 0 Query: 114 AASPTTPVVKGNGVCNDAISHLRNPKTGQDIYMIGTAHISNESAILVRSTIRALRPQTVMLELDASRIG------------------------------------------------------------------REGKKGFLKAALGELTRAGSNFREKLIGVGAVVVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGADLLLGDQNVQVTLRRLSDALSKSELVKVREMESPTRSPAARELEARGIK--MGGND----------KAELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSASLLGCKS-KVIVGVVGIGHLDGIERNLGREGF 381 A +P +V C+ +S + + + +Y++GTAHIS S+ L ++ + P V +ELD R+ ++ + L E R G ++++G GA VG+ I G+Y+ L+ GF G+EF+VA+ EG+++GAD++LGDQ+V+VTLRR++ AL++++L K+ + +S ELE RG++ MG +D K+EL+ VE +K R SVR +M+ LQ P + + M+ ERDAYM+A L +VI V+GI H+DG+ERNL +G+ Sbjct: 89 AFAPAPSIVTTAATCDTTVSVWQ--RGDRIVYILGTAHISEISSDLAGQLVKDVHPSAVFVELDLKRVSGVTVSPGTPVTSRLPISTDVTELPATGEGASTKQSKIIVSVPALPDSVASRPTESTGIASLAATTKQDDELASASPVLTESPRRG--LGQRMLGFGAAAVGKAIQGMYKNLNDSGFKPGEEFVVAVREGQRIGADIVLGDQDVEVTLRRMTQALAQTDLNKLLDPDS--------ELE-RGMRELMGDSDPSLASSPDAFKSELSTYVENMKTRDSVRKIMAQLQKVAPALVQVMLTERDAYMAAGLDTLNQFEVITAVMGIAHMDGVERNLQSQGW 421
BLAST of NO03G04140 vs. NCBI_GenBank
Match: OEU22926.1 (hypothetical protein FRACYDRAFT_233089 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 139.8 bits (351), Expect = 1.800e-29 Identity = 109/337 (32.34%), Postives = 156/337 (46.29%), Query Frame = 0 Query: 121 VVKGNGVCNDAISHLRNPKTGQDIYMIGTAHISNESAILVRSTIRALRPQTVMLELDASRIGREGKKGFLKAALGELTRAGS--NFREKLIGVGAV-----------------------------------------------------VVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGADLLLGDQNVQVTLRRLSDALSK----------SELVKVRE-MESPTRSPAARELEARGIKMGGNDK--------AELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSASLLGCKS-KVIVGVVGIGHLDGIERNLGREGFVS 383 +V VC+ +S + K G+ IY++GTAHIS+ SA L IR +P+ V +ELD R+ G G GS RE + V + VG+ I GLY+ LD GF SG+EF+ A++EGRK+GAD++LGD++V+VTLRR+++ L+K SEL + E M P A+ +GG++K EL VE +K + +VR +M LQ P +Y+A++ ERD YM+ L G + IV VVGI H DGIE +L G+ S Sbjct: 77 IVTSKSVCDPTVSVWK--KNGRIIYLLGTAHISSSSAALAGQLIRDSQPKGVFIELDPKRVSGTGVLAQKMNNDGSENGGGSAPTIRESKVIVPQISAVEGDGGLSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGKSIKGLYQRLDSAGFDSGEEFVTAVKEGRKIGADIILGDRDVEVTLRRVTEGLAKTDLKALLSPDSELERTLEGMSLPNPKAQAKLSGQSSSSVGGDEKELSDEQFREELTSFVETMKTKDNVRTIMGQLQRVAPFLYEALVSERDVYMATGLNGLNDIESIVAVVGIAHADGIENSLQMNGWKS 411
BLAST of NO03G04140 vs. NCBI_GenBank
Match: XP_002291881.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90732.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 135.6 bits (340), Expect = 3.400e-28 Identity = 107/361 (29.64%), Postives = 170/361 (47.09%), Query Frame = 0 Query: 107 QAATLP-TAASPTTPVVKGNGVCNDAIS-HLRNPKTG-QDIYMIGTAHISNESAILVRSTIRALRPQTVMLELDASRIGREGKKGFLKA-----------------------------------------ALGELTRAGSNFREKLIGVGAVVVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGADLLLGDQNVQVTLRRLSDALSKSELVKVREMESPTRSPAARELEARGIK------MGGN------------------------DKAELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSASL----LGCKSKV--IVGVVGIGHLDGIERNLGREGF--VSVPC 386 QAAT A+ +T + N +C+ ++S ++ T + I+++GTAHIS+ SA L + +R L+P V +ELDA R+ R G ++ T + + KL+ VG+ VG + G+Y L+ GF +G EF +++ EG +G+ ++LGD++V+VTLRRL+ AL+K+++ K+ S + EL +K GGN DK E VE +K + +V+ +M L+ PE+Y+AM+ ERD YM+ L + KV V VVG+ H+DGIER L +G+ +S PC Sbjct: 136 QAATATFNASKQSTSTLVSNTLCDPSVSTWVKTDATSMRTIHILGTAHISSASAELAGTMVRELKPDVVFVELDAKRVARAIPGGVSRSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSNPFDVQAKLVNVGSKYVGDAVKGMYGKLESEGFKAGDEFAMSVREGLAIGSTIVLGDRDVEVTLRRLTQALAKTDIRKLLSANSEVER-SMEELLPDNMKNQLKQTSGGNTVSNNVGDASINVSSMGFEGDMAIDKQEFQTFVETMKAKENVKKIMKALEKTAPEIYQAMVAERDVYMAMGLDELSVNVNGKVDNTVAVVGMAHVDGIERYLASQGWQALSYPC 495
BLAST of NO03G04140 vs. NCBI_GenBank
Match: PSC74329.1 (conjugal transfer [Micractinium conductrix]) HSP 1 Score: 135.2 bits (339), Expect = 4.400e-28 Identity = 88/246 (35.77%), Postives = 134/246 (54.47%), Query Frame = 0 Query: 135 LRNPKTGQDIYMIGTAHISNESAILVRSTIRALRPQTVMLELDASRIGREGKKG-----FLKAALGELTRAGSNFREKLIGVGAVVVGQVISGLYRGLDKMGFVSGQEFIVAMEEGRKVGADLLLGDQNVQVTLRRLSDALSKSELVKVREMES-PTRSPAARELEARGIKMGGNDKAELAVAVEALKERASVRALMSTLQSELPEVYKAMIEERDAYMSASLLGCKSKVIVGVVGIGHLDGIERN 375 LRN G +I+++GTAH+S +SA VR IR +RP TVMLEL + R+ R G LK+ +G G +K++ G +V YR + +G G EF A+EE ++GA ++ GD++VQ TL+RLS ++ +L+++ P P E AR + + VE +K RA VR + L+ P + + MI+ERD +M +L + +V VGVVG+ HLDG+ER+ Sbjct: 79 LRNLHNGAEIFLVGTAHVSKQSAEEVREMIRLVRPSTVMLELCSGRLARLRSGGTSDAELLKSMMGTFAAPGGTMSQKVVQAGLPLV-------YRAMKALGMDPGAEFKAAVEEAERIGARIVCGDRDVQQTLQRLSQTVNFQDLMRMMTGRGLPDPPPGMAEFYAR------QSGSSIETKVEGMKTRAMVREMAEYLRQVNPRLAEVMIDERDQHMVDALARLEGRV-VGVVGLAHLDGMERS 310 The following BLAST results are available for this feature:
BLAST of NO03G04140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G04140 ID=NO03G04140|Name=NO03G04140|organism=Nannochloropsis oceanica|type=gene|length=1358bpback to top protein sequence of NO03G04140.1 >NO03G04140.1-protein ID=NO03G04140.1-protein|Name=NO03G04140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=392bpback to top Synonyms
Publications
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