NO03G04120, NO03G04120 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO03G04120 vs. NCBI_GenBank
Match: EWM29881.1 (hypothetical protein Naga_100106g20 [Nannochloropsis gaditana]) HSP 1 Score: 394.4 bits (1012), Expect = 3.500e-106 Identity = 208/326 (63.80%), Postives = 234/326 (71.78%), Query Frame = 0 Query: 23 VHHAFNPPSSPLLPLPASSRAKPMERRDLLKDGLLLLGGVMGLGLPAAALIHPRSASAATGAAVPHTVDYTAFQKKLFQKPPGLLTYPAWMEGEWQVSCKFIGADFPSSAAEASPFVPKGRIVSDTGLPGFRRLSIAMVPDVGKDHAFRMRFVSKN-----GGRVEEDKIFNLKNALESELGKAAVTTIEYNPDKNPNRASLNLLPGASPNAQRIELFWNARSVLPSPPGPDSSSSTGS-------------FRFLEDVRQVSLTPQLAETSTVGDYRHLWEFYPAGPGLIKAYLSTVAYATPQDPLFQTSGLQPLVVYFHLLTMR 331 + + P S P PL ++R LL + LL+ GG LGL ++ + A A T + HTV+YTAFQKK FQKPPG L YP+WMEGEW VSC+FIGADFPSSAA ++PFVP+ RI +DT LPGFRRLSIAMVPDVGKDH FRMRF+ N G V EDK+FNLK ALESELGKA VT I+YNP KNPNRASL LLPG+SPNAQRIELFWNARS LPSPP + FRF+ED+RQVSLTPQLAETS+VGDYRHLWEFY GP IK YLSTVAY TPQ PLFQT+GLQPLVVYFH LTMR Sbjct: 52 IQYGAEPSSWPCSPL--------VDRHRLLNNALLIAGG-STLGL-SSQMTSTLPAWAFTDVNIRHTVNYTAFQKKFFQKPPGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDHDFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTXXXXXXXXXXXXXXXXDVFRFVEDIRQVSLTPQLAETSSVGDYRHLWEFYHIGPESIKTYLSTVAYTTPQGPLFQTAGLQPLVVYFHTLTMR 367
BLAST of NO03G04120 vs. NCBI_GenBank
Match: GAX27645.1 (hypothetical protein FisN_13Hh264 [Fistulifera solaris]) HSP 1 Score: 151.4 bits (381), Expect = 5.200e-33 Identity = 88/245 (35.92%), Postives = 123/245 (50.20%), Query Frame = 0 Query: 91 DYTAFQKKLFQKPPGLLTYPAWMEGEWQVSCKFIGADFPSSAAEASPFVPKGRIVSDTGLPGFRRLSIAMVPDVGKDHAFRMRFVSKNGGRVEEDKIFNLKNALESELGKAAVTTIEYNPDKNPNRASLNLLPGASPNAQRIELFWNARSVLPSPPGPDSSSSTGSFRFLEDVRQVSLTPQLAETSTVG-------DYRHLWEFYPAGPGLIKAYLSTVAYATPQDPLFQTSGLQPLVVYFHLLT 329 D A + +LF PP YP WM G W + F G FPS + K ++ D G+ GF++ SIA + DVGK+ + + + G ED+IFNL+ +++ LG AV + Y+ KNPNR +N + + NA+RIELF NAR ++ T F E +RQV+ STVG +Y H W + G I+ L T AY PQDPL+ P+V+Y HLLT Sbjct: 54 DPAALKNRLFNLPPAQQVYPKWMRGLWNIEMSFSGFLFPSQT------IAKETLLRDFGIAGFQKCSIAHIADVGKEKVMQQMAIDRETG--WEDRIFNLRQTIDAHLGYTAVQEVVYDGKKNPNRIGINFVDYRTTNAERIELFCNAREA-----EEYETNGTSYFVHSEYIRQVT----FGTGSTVGVPRQVSTNYGHFWTWKKESDGSIRGNLLTAAYLDPQDPLYFQEPALPVVIYSHLLT 281
BLAST of NO03G04120 vs. NCBI_GenBank
Match: EJK56237.1 (hypothetical protein THAOC_23914 [Thalassiosira oceanica]) HSP 1 Score: 145.6 bits (366), Expect = 2.800e-31 Identity = 90/260 (34.62%), Postives = 138/260 (53.08%), Query Frame = 0 Query: 70 AALIHPRSASAATGAAVPHTVDYTAFQKKLFQKPPGLLTYPAWMEGEWQVSCKFIGADFPSSAAEASPFVPKGRIVSDTGLPGFRRLSIAMVPDVGKDHAFRMRFVSKNGGRVEEDKIFNLKNALESELGKAAVTTIEYNPDKNPNRASLNLLPGASPNAQRIELFWNARSVLPSPPGPDSSSSTGSFRFLEDVRQVS--LTPQL-AETSTVGDYRHLWEFYPAG-PGLIKAYLSTVAYATPQDPLFQTSGLQPLVVYFH 326 A+ I+P++ SA A+ D + +F PP TYP +M G+W V ++ G FPS +PK ++V++ G+PGF++LSIA + DVGK+ A + ++ G ED+ +L ++++S LG AV + Y+ NPNR S++ +P + NA RIELF+N R +S+S F E RQV+ L+ + V +Y H W + G P + L T AY PQDP+F +P+VVY H Sbjct: 60 ASGINPQACSAEGLASKLSLRDPAQLKNSVFNIPPAAQTYPEFMRGDWDVEMRYRGFVFPSKT------IPKDKLVANVGIPGFQKLSIAQIGDVGKESANYRLMIDESTGL--EDRKLSLSSSIDSHLGYEAVREVVYDVKDNPNRLSVDFIPQRTRNANRIELFYNGRDA-ELVASTESASGKTVFVCSEFTRQVTFGLSQEFGVARQAVTNYGHFWTWKSGGRPDELTGNLLTAAYLDPQDPMFFDEPSKPVVVYSH 310
BLAST of NO03G04120 vs. NCBI_GenBank
Match: GAX27186.1 (hypothetical protein FisN_13Lh264 [Fistulifera solaris]) HSP 1 Score: 143.7 bits (361), Expect = 1.100e-30 Identity = 86/245 (35.10%), Postives = 121/245 (49.39%), Query Frame = 0 Query: 91 DYTAFQKKLFQKPPGLLTYPAWMEGEWQVSCKFIGADFPSSAAEASPFVPKGRIVSDTGLPGFRRLSIAMVPDVGKDHAFRMRFVSKNGGRVEEDKIFNLKNALESELGKAAVTTIEYNPDKNPNRASLNLLPGASPNAQRIELFWNARSVLPSPPGPDSSSSTGSFRFLEDVRQVSLTPQLAETSTVG-------DYRHLWEFYPAGPGLIKAYLSTVAYATPQDPLFQTSGLQPLVVYFHLLT 329 D A + +LF PP YP WM G W + F G FPS + K ++ D + GF++ SIA + DVGK+ + + G ED++FNL+ +++ LG AAV + Y+ KNPNR +N + + NA+RIELF NAR ++ T F E +RQV+ STVG +Y H W + I+ L T AY PQDPL+ P+V+Y HLLT Sbjct: 56 DPAALKNRLFNLPPTQQLYPTWMRGLWNIEMSFSGFLFPSQT------ITKETLLRDFAIAGFQKCSIAHIADVGKEKVTMPMAIDRETG--WEDRVFNLRQTIDAHLGYAAVQEVLYDGKKNPNRIGINFVNYRTTNAERIELFCNAREA-----EEYETNGTSYFVHGEYIRQVT----FGTGSTVGVPRQVSTNYGHFWTWQKESDNSIRGNLLTAAYLDPQDPLYFQEPTLPVVIYSHLLT 283
BLAST of NO03G04120 vs. NCBI_GenBank
Match: XP_002296594.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED87290.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 141.0 bits (354), Expect = 7.000e-30 Identity = 96/273 (35.16%), Postives = 143/273 (52.38%), Query Frame = 0 Query: 67 LPAAALIHPRS--ASAATGAAVPHTV-DYTAFQKKLFQKPPGLLTYPAWMEGEWQVSCKFIGADFPSSAAEASPFVPKGRIVSDTGLPGFRRLSIAMVPDVGKDHAFRMRFVSKNGGRVEEDKIFNLKNALESELGKAAVTTIEYNPDKNPNRASLNLLPGASPNAQRIELFWNAR-SVLPSPPGPDSSSSTGSFRFLEDVRQVS--LTPQL-AETSTVGDYRHL--WEFYPAGPGLIKAYLSTVAYATPQDPLFQTSGLQPLVVYFHLLTMR 331 L AAAL + A+AA G A + D + + +F PPG+ TYP+++ G+W VS K+ G FPS +PK ++V + +PGF++LSIAMV DVG++ + NG ED+ ++ LG AV + Y+ +NPNR S++ +P + NA RIELF+N R S L + P ++ F E +RQV+ L+ + +G+Y H W P L+K + T AY QDP+F +P+VVY H L R Sbjct: 59 LVAAALASTSTLPANAANGLAFKLSQRDPSQLKNSMFNIPPGVQTYPSFLRGQWDVSSKYRGFIFPSQN------IPKEKLVQNVAIPGFQKLSIAMVGDVGRELTNYSMNIDANG---LEDRETTFLTSINGHLGIDAVKEVIYDAKENPNRLSIDFIPQRTRNANRIELFFNGRESELVTTP---NAYEANIFVCSEYIRQVTFGLSQEFGVARQVIGNYAHFYTWRSQPDDASLVKGNVLTAAYLDAQDPMFFDEPSKPVVVYSHDLVAR 319
BLAST of NO03G04120 vs. NCBI_GenBank
Match: XP_002508527.1 (predicted protein [Micromonas commoda] >ACO69785.1 predicted protein [Micromonas commoda]) HSP 1 Score: 138.3 bits (347), Expect = 4.500e-29 Identity = 100/338 (29.59%), Postives = 157/338 (46.45%), Query Frame = 0 Query: 40 SSRAKPMERRDLLKDGLLLLGGVMGLGLPAAALIHPRSASAATGAAVPHTVDYTAFQKKLFQKP-PGLLTYPAWMEGEWQVSCKFIGADFPSSAAEASPFVPKGRIVSDTGLPGFRRLSIAMVPDVG-KDHAFRMRFVSKNG-GRVEEDKIFNLKNALESELGKAAVTTIEYNPDKNPNRASLNLLPGASPNAQRIELFWNARSVLPSPPGPDSSSSTGSFRFLEDVRQVSL-------TPQLAETSTVGDYRHLWEFYPAG------------------PGLIKAYLSTVAYATPQDPLFQT-------------------SGLQPLVVYFHLLTMR 331 ++RA+ + ++ L + L L A + S + A+ A + ++ K +F K PG YP W+EG W+ + F G +FPS + K ++ + +PGF++LS+ VPDVG D ++ +RF G V ED+ FNLK+ + + LGK AV ++EY P ++ NR ++N+ PGASPNA+RIELF NAR ++ + +F E RQV+L T ++ T DY+H+W F P + LST Y D L T + +P V+Y H++T+R Sbjct: 31 AARARHDDEAEVRGADLAVFDRRRALALSAGLALLDPSPALASSALLSERLERKDLSKPVFNKARPGPQRYPDWLEGTWRCTATFAGFEFPSKT------MSKSALIKEPTIPGFQKLSLVYVPDVGTSDVSYDVRFAKFEGIEGVLEDRAFNLKSIVNAYLGKDAVESVEYEPTRDANRTTVNIRPGASPNAERIELFCNARE-------SETRVADRTFFASEASRQVTLGYGKDFGTARVVNT----DYQHVWTFTPTAWRSSNGDXXXXXXXXXXXXXEARVTLSTAGYVQANDALRFTAAPSATGGAPMPSLGGAAGAAFEPAVLYSHVMTLR 351
BLAST of NO03G04120 vs. NCBI_GenBank
Match: XP_003056810.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH58455.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 137.9 bits (346), Expect = 5.900e-29 Identity = 100/326 (30.67%), Postives = 155/326 (47.55%), Query Frame = 0 Query: 36 PLPASSRAKPMERRDLLKDGLLLLGGVMGLGLPAAALIHPRSASAATGAAVPHTVDYTAFQKKLFQKP-PGLLTYPAWMEGEWQVSCKFIGADFPSSAAEASPFVPKGRIVSDTGLPGFRRLSIAMVPDVG-KDHAFRMRFVSKN--GGRVEEDKIFNLKNALESELGKA-AVTTIEYNPDKNPNRASLNLLPGASPNAQRIELFWNARSVLPSPPGPDSSSSTGSFRFLEDVRQVSL--TPQLAETSTVG-DYRHLWEFYPAGPG-----LIKAYLSTVAYATPQDPLFQT-------------------SGLQPLVVYFHLLTM 330 P SRA+ RD ++ GL A+ L P A+ A ++ V+ K +F K PG +P W+EG W+ + F G DFPS + K ++ + +PGF+++S+ VPDVG D + +RFV N G V ED++FNLK+ +++ L + AV +EY+ + NR ++ L PG S NA+RIELF NAR ++ +S G+F E +RQV+L + + V DY+H+W + P ++ LST Y P D + T + +P V+Y H + M Sbjct: 20 PRARVSRARAFVARDGADYDFDRRAALLAGGLLASTLALPEPAALAASTSLAERVERRDLSKPVFNKARPGPTRFPDWLEGTWRCTSTFEGFDFPSKN------INKNALLKEPTVPGFQKMSLVYVPDVGTSDVEYLVRFVRANDGDGGVCEDRVFNLKSIVDAYLKRPDAVEAVEYDAASDANRVTVRLAPGVSNNAERIELFSNARE-------SETRASDGTFFAAEALRQVTLGYSKDYNKARVVNTDYQHVWSYTPTYESDGSIRRVRCALSTAGYIQPSDAMRLTAMPNLGGGAPVPSMGNMGNASFEPAVLYSHTIVM 332
BLAST of NO03G04120 vs. NCBI_GenBank
Match: XP_009034597.1 (hypothetical protein AURANDRAFT_62188 [Aureococcus anophagefferens] >EGB11040.1 hypothetical protein AURANDRAFT_62188 [Aureococcus anophagefferens]) HSP 1 Score: 136.7 bits (343), Expect = 1.300e-28 Identity = 87/245 (35.51%), Postives = 125/245 (51.02%), Query Frame = 0 Query: 91 DYTAFQKKLFQKPPGLLTYPAWMEGEWQVSCKFIGADFPSSAAEASPFVPKGRIVSDTGLPGFRRLSIAMVPDVGKDHA-FRMRFVSKNGGRVEEDKIFNLKNALESELGKA-AVTTIEYNPDKNPNRASLNLLPGASPNAQRIELFWNARSVLPSPPGPDSSSSTGSFRFL--EDVRQVSL------TPQLAETSTVGDYRHLWEFYPAGPGLIKAYLSTVAYATPQDPLFQTSGLQPLVVYFH 326 D +K PPG YPAW+EG W+ F G + PS + K R+V++T LPGF +LS+A DVG++ + MRF G V ED ++ ++L + G A V ++ Y+ KN NRA++ L PG + N +RIELF N R S + G FL E+VRQV+L P A +G+Y+H + +GP + + T Y PQDP+F + P+VVY H Sbjct: 49 DANLLRKPFIAVPPGPTAYPAWLEGTWRCDAAFAGFELPSKK------ISKQRVVANTDLPGFTKLSVARFGDVGRESTRYEMRFYRTPSGAVYEDYARDVASSLNAHAGDARLVESVSYDVAKNANRATVTLRPG-TRNGERIELFVNGR----------RSEALGDDVFLSSENVRQVTLGYGTTSNPSAARV-VIGEYQHYATWRRSGPDAARCNVLTAVYVEPQDPMFGDAFDLPVVVYAH 275
BLAST of NO03G04120 vs. NCBI_GenBank
Match: XP_001419774.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO98067.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 136.7 bits (343), Expect = 1.300e-28 Identity = 91/280 (32.50%), Postives = 135/280 (48.21%), Query Frame = 0 Query: 104 PGLLTYPAWMEGEWQVSCKFIGADFPSSAAEASPFVPKGRIVSDTGLPGFRRLSIAMVPDVGKD--HAFRMRFVSKNGGRVEEDKIFNLKNALESELGKAAVTTIEYNPDKNPNRASLNLLPGASPNAQRIELFWNARSVLPSPPGPDSSSSTGSFRFLEDVRQVSL---TPQLAETSTVGDYRHLWEFYP-----------AGP-----------GLIKAYLSTVAYATPQDPLFQTS--------------------GLQPLVVYFHLLTMRSAPAPP 337 P YP W+EGEW+ + F G +FPS+ V + + + PGF++LS+A PDVG++ +RMRF +++GG V ED+ FNL+ +++ +G+ AV +EY+ ++ NR ++ L GAS NA+RIELF NAR ++ S G+F LE +RQV+L T DY H+W F P AG +KA LST Y P D L T+ +P+V+Y H+L + P Sbjct: 69 PRAQAYPDWLEGEWRATIDFAGYEFPSAV------VAREAVAREATTPGFQKLSLAYAPDVGREGKTEYRMRF-ARDGGDVIEDRGFNLREIVDAYVGEGAVEAVEYDARRDANRTTIRLKRGASNNAERIELFTNARD-------SETRESDGTFFALESLRQVTLGYSTSYGVARMVPTDYTHVWTFTPLPDVDGVDGASAGEPRIGVTGVKVVNRVKATLSTAGYLQPNDALKYTASDAANPNGAPVPRVGAASQVAFEPVVLYSHVLYLERVGCVP 334
BLAST of NO03G04120 vs. NCBI_GenBank
Match: KOO53222.1 (hypothetical protein Ctob_010400 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 127.9 bits (320), Expect = 6.100e-26 Identity = 80/239 (33.47%), Postives = 120/239 (50.21%), Query Frame = 0 Query: 107 LTYPAWMEGEWQVSCKFIGADFPSSAAEASPFVPKGRIVSDTGLPGFRRLSIAMVPDVGKDHA-FRMRFVSKNGGRVEEDKIFNLKNALESELGKAAVTTIEYNPDK-----------NPNRASLNLLPGASPNAQRIELFWNARSVLPSPPGPDSSSSTGSFRFLEDVRQVSLTPQLAETSTV-GDYRHLWEFYPAGPGLIKAYLSTVAYATP---QDPLFQTSGLQPLVVYFHLLTM 330 L +P W+EGEWQ S +F G + P A +P+ + + +PGF++LSIA +PDVGK+ ++MR+ + G V ED+IFN ++A+ LG A+ ++Y D NPNR L PG +PNA+RIELF N P G D T E +RQV+ + +T V G+Y H + + A T YA P + Q +PL+V+ H +++ Sbjct: 3 LAFPKWLEGEWQASQQFAGYELP-----AKDVIPRDALFKEVDVPGFKKLSIAFLPDVGKEGVRYQMRWAADAAGVVREDRIFNFRSAIRGGLGYDAIERVDYKTDPNNQFGLGSNTGNPNRLKLVFAPGLTPNAERIELFINEHE-SEQPEGRDDLFYTS-----EALRQVTFS--AGQTRQVNGEYAHFISYRRVSETQVNAICVTACYADPLQLERFFIQVGPNRPLIVFSHGISL 228 The following BLAST results are available for this feature:
BLAST of NO03G04120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G04120 ID=NO03G04120|Name=NO03G04120|organism=Nannochloropsis oceanica|type=gene|length=1099bpback to top protein sequence of NO03G04120.1 >NO03G04120.1-protein ID=NO03G04120.1-protein|Name=NO03G04120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=342bpback to top Synonyms
Publications
|