NO03G04050, NO03G04050 (gene) Nannochloropsis oceanica

Overview
NameNO03G04050
Unique NameNO03G04050
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3070
Alignment locationchr3:1179674..1182743 -

Link to JBrowse

Properties
Property NameValue
DescriptionFad-dependent pyridine nucleotide-disulfide oxidoreductase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1179674..1182743 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
IPR015904Sulphide_quinone_reductase
IPR023753Pyr_nucl-diS_OxRdtase_FAD/NAD
Homology
BLAST of NO03G04050 vs. NCBI_GenBank
Match: EWM29872.1 (fad-dependent pyridine nucleotide-disulfide oxidoreductase [Nannochloropsis gaditana])

HSP 1 Score: 724.5 bits (1869), Expect = 2.200e-205
Identity = 345/497 (69.42%), Postives = 406/497 (81.69%), Query Frame = 0
Query:    1 MKIFIILAVLTAASMVEDVQAFILRPCL-----SCGTYQPQQSRKRLAVTTLASPSTISDTIYAASTDHHKIMILGGGTGGCGVAAQLLNEGVLAKDICILEPATTHYYQPLWTMVGAGIFDVAVSARPMSSTIPNGVTWLRDSAIKVAPDDNQVQCASGRKLSYDYLVVATGLQCDWDKVPGLAEALVDHEKTGVCSNYHPQYAQNTWRVLEGLRNGSALFTQPKTPVKCGGAPQKIMWLTDDYLRRQNRRGDVDIHFVLPQKVHFGVSKYAEVLKTEATTRDIDFMFETTLVSVDGVQHRATFRRLSDGSEFELPFAMLHVTPPMSAPDFLKGSPLANEQGFVAVDKYTTQHITYPNVFSLGDSSSLPTSKTMAAITGEAPVLTHNLLRVMQGKRPTAEYDGFTSCPIVLGYGKLLMTEFVYDCIPQESFTKIPLPFLDQGKPSYFYFLVKKYVFPFVYWNLFMKGRWFGSKLVFKPDFSEVDRRADEEDKKNAV 493
            MK   +L   +   +  +  AF+  PCL       GTY  Q+S   L  + L++ ST +D I +  T HHKI+ILGGGTGGCG AA L+NEG+ A DICI+EPA+THYYQPLWT+VGAGIFD A SARPMS  IP GV W RD+A K+ P+ N VQCASGR+L+YDYL+VATGLQCDWDK+PGL +AL + E + VCSNYHP+YA+NTWRVL GL  GSALFTQP +PVKCGGAPQKIMWL DDYLRR NRR  VDI+F +PQKV+FGV +YAEVL++E+  R + F+FET LV V+G +  ATF+R+ DGSE+ LP+AMLHVTPPMSAPDFLK SPLA+ +GFV VDKYTTQH+ YPNVF+LGDSSSLPTSKTMAAITG+APVL HNLLRVM+GKR TA YDGFTSCPIVLGY KLLMTEFVYDC+PQE+FTKIPLPFLDQGKPS+F+FLVKKYVFPFVYWNLFMKGRW+GS+L+FKPD+SE DRRAD E++   V
Sbjct:    1 MKGSDVLGFFSVFLVAHNAAAFLRPPCLKDASHGRGTYPHQRSVFTLVASPLSATSTAND-INSGPTSHHKILILGGGTGGCGSAAHLINEGMQAADICIVEPASTHYYQPLWTLVGAGIFDRATSARPMSDIIPKGVAWARDAASKIDPEINTVQCASGRQLTYDYLIVATGLQCDWDKIPGLQDALHNSETSHVCSNYHPEYAENTWRVLRGLSEGSALFTQPPSPVKCGGAPQKIMWLADDYLRRNNRRNAVDINFFMPQKVYFGVPRYAEVLESESKARGVGFVFETLLVGVNGERREATFQRVKDGSEYTLPYAMLHVTPPMSAPDFLKTSPLADPKGFVEVDKYTTQHVRYPNVFALGDSSSLPTSKTMAAITGQAPVLVHNLLRVMRGKRATATYDGFTSCPIVLGYDKLLMTEFVYDCVPQETFTKIPLPFLDQGKPSFFFFLVKKYVFPFVYWNLFMKGRWYGSRLIFKPDYSEADRRADMEEESKDV 496          
BLAST of NO03G04050 vs. NCBI_GenBank
Match: XP_005853537.1 (fad-dependent pyridine nucleotide-disulfide oxidoreductase [Nannochloropsis gaditana CCMP526] >EKU22825.1 fad-dependent pyridine nucleotide-disulfide oxidoreductase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 602.4 bits (1552), Expect = 1.200e-168
Identity = 276/368 (75.00%), Postives = 320/368 (86.96%), Query Frame = 0
Query:  125 MSSTIPNGVTWLRDSAIKVAPDDNQVQCASGRKLSYDYLVVATGLQCDWDKVPGLAEALVDHEKTGVCSNYHPQYAQNTWRVLEGLRNGSALFTQPKTPVKCGGAPQKIMWLTDDYLRRQNRRGDVDIHFVLPQKVHFGVSKYAEVLKTEATTRDIDFMFETTLVSVDGVQHRATFRRLSDGSEFELPFAMLHVTPPMSAPDFLKGSPLANEQGFVAVDKYTTQHITYPNVFSLGDSSSLPTSKTMAAITGEAPVLTHNLLRVMQGKRPTAEYDGFTSCPIVLGYGKLLMTEFVYDCIPQESFTKIPLPFLDQGKPSYFYFLVKKYVFPFVYWNLFMKGRWFGSKLVFKPDFSEVDRRADEEDKKNAV 493
            MS  IP GV W RD+A K+ P+ N VQCASGR+L+YDYL+VATGLQCDWDK+PGL +AL + E + VCSNYHP+YA+NTWRVL GL  GSALFTQP +PVKCGGAPQKIMWL DDYLRR NRR  VDI+F +PQKV+FGV +YAEVL++E+  R + F+FET LV V+G +  ATF+R+ DGSE+ LP+AMLHVTPPMSAPDFLK SPLA+ +GFV VDKYTTQH+ YPNVF+LGDSSSLPTSKTMAAITG+APVL HNLLRVM+GKR TA YDGFTSCPIVLGY KLLMTEFVYDC+PQE+FTKIPLPFLDQGKPS+F+FLVKKYVFPFVYWNLFMKGRW+GS+L+FKPD+SE DRRAD E++   V
Sbjct:    1 MSDIIPKGVAWARDAASKIDPEINTVQCASGRQLTYDYLIVATGLQCDWDKIPGLQDALHNSETSHVCSNYHPEYAENTWRVLRGLSEGSALFTQPPSPVKCGGAPQKIMWLADDYLRRNNRRNAVDINFFMPQKVYFGVPRYAEVLESESKARGVGFVFETLLVGVNGERREATFQRVKDGSEYTLPYAMLHVTPPMSAPDFLKTSPLADPKGFVEVDKYTTQHVRYPNVFALGDSSSLPTSKTMAAITGQAPVLVHNLLRVMRGKRATATYDGFTSCPIVLGYDKLLMTEFVYDCVPQETFTKIPLPFLDQGKPSFFFFLVKKYVFPFVYWNLFMKGRWYGSRLIFKPDYSEADRRADMEEESKDV 368          
BLAST of NO03G04050 vs. NCBI_GenBank
Match: WP_026609605.1 (NAD(P)/FAD-dependent oxidoreductase [Methylocaldum szegediense])

HSP 1 Score: 406.0 bits (1042), Expect = 1.700e-109
Identity = 194/404 (48.02%), Postives = 263/404 (65.10%), Query Frame = 0
Query:   64 HHKIMILGGGTGGCGVAAQLLNEGVLAKDICILEPATTHYYQPLWTMVGAGIFDVAVSARPMSSTIPNGVTWLRDSAIKVAPDDNQVQCASGRKLSYDYLVVATGLQCDWDKVPGLAEALVDHEKTGVCSNYHPQYAQNTWRVLEGLRNGSALFTQPKTPVKCGGAPQKIMWLTDDYLRRQNRRGDVDIHFVLPQKVHFGVSKYAEVLKTEAT-TRDIDFMFETTLVSVDGVQHRATFRRLSDGSEFELPFAMLHVTPPMSAPDFLKGSPLANEQGFVAVDKYTTQHITYPNVFSLGDSSSLPTSKTMAAITGEAPVLTHNLLRVMQGKRPTAEYDGFTSCPIVLGYGKLLMTEFVYDCIPQESFTKIPLPFLDQGKPSYFYFLVKKYVFPFVYWNLFMKG-RW 466
            HH+++++GGG  G G+AA++L+ GV  KD+ I+EP+  HYYQP WT VG G+ +   S +PM+  IP G  W++D+A +  PD+N V+   G+++ YDYLVV  GLQ DWDK+PG+ EAL    K GVCSNY      +TW  +   + G+A+FT P  P+KC GAPQKIM+L +DY R+Q  R    + +       F   KYA  L  +    R+I+  F+  LV +      A F+ L  G     P+ M+HV PPMSAPDFLK SPL NE G+V V+K T QH+ YPNVFSLGD+SSLPTSKT AAI  ++PVL  NLL VM G +P A+YDG+TSCP++ GYGKL++ EF YD  P+E+F     PF DQGK  Y  +L+K+Y+ P +YW   ++G +W
Sbjct:    6 HHRVVVIGGGAAGLGIAARMLHAGV--KDVAIIEPSDKHYYQPFWTFVGGGVVNREQSVKPMADLIPKGAAWIQDAAEEFDPDNNLVKTRGGKQVGYDYLVVCPGLQIDWDKIPGVKEAL---GKNGVCSNYSYDTVNSTWENIRNFKGGNAVFTFPPPPIKCAGAPQKIMYLAEDYFRKQGIRDKSRVVYYCATPTIFSAPKYATSLMEQVVKPRNIEVHFKHNLVELRPDSKEAVFKNLDTGENVVQPYDMIHVVPPMSAPDFLKKSPLGNEGGWVDVNKETLQHVRYPNVFSLGDASSLPTSKTAAAIRAQSPVLAANLLSVMNGGQPVAKYDGYTSCPLITGYGKLILAEFDYDLKPKETF-----PF-DQGKERYSMYLLKRYIIPVIYWKGLIRGYKW 398          
BLAST of NO03G04050 vs. NCBI_GenBank
Match: WP_077730346.1 (NAD(P)/FAD-dependent oxidoreductase [Methylocaldum sp. 14B])

HSP 1 Score: 404.4 bits (1038), Expect = 5.000e-109
Identity = 190/401 (47.38%), Postives = 258/401 (64.34%), Query Frame = 0
Query:   64 HHKIMILGGGTGGCGVAAQLLNEGVLAKDICILEPATTHYYQPLWTMVGAGIFDVAVSARPMSSTIPNGVTWLRDSAIKVAPDDNQVQCASGRKLSYDYLVVATGLQCDWDKVPGLAEALVDHEKTGVCSNYHPQYAQNTWRVLEGLRNGSALFTQPKTPVKCGGAPQKIMWLTDDYLRRQNRRGDVDIHFVLPQKVHFGVSKYAEVLKTEAT-TRDIDFMFETTLVSVDGVQHRATFRRLSDGSEFELPFAMLHVTPPMSAPDFLKGSPLANEQGFVAVDKYTTQHITYPNVFSLGDSSSLPTSKTMAAITGEAPVLTHNLLRVMQGKRPTAEYDGFTSCPIVLGYGKLLMTEFVYDCIPQESFTKIPLPFLDQGKPSYFYFLVKKYVFPFVYWNLFMKG 464
            HH+++++GGG  G G+AA+LL+ G+   D+ I+EP+  HYYQP WT VG G+     S +PM+  IP G TW+RD+A +  P +N ++   G+++ YDYLVV  GLQ DWDK+PG+ EA+    K GVCSNY       TW  +   + G+A+FT P  P+KC GAPQKIM+L +DY R+   R    + +       F   KYA  L  +    R+I+  F+  LV +      A F+ L  G     P+ M+HV PPMSAPDFLK SPL NE G+V V+K T QH+ YPNVFSLGD+SSLPTSKT AA+  ++P+LT NLL VM G +P A+YDG+TSCP++ GYGKL++ EF YD  P+E+F     PF DQGK  Y  +L+K+Y+ P +YW   +KG
Sbjct:    6 HHRVVVIGGGAAGLGIAARLLHAGI--TDVAIIEPSEKHYYQPFWTFVGGGVVTREQSVKPMAELIPKGATWIRDAAAEFDPANNSLKTEGGKEIGYDYLVVCPGLQIDWDKIPGVKEAV---GKDGVCSNYSYDTVNTTWENIRNFKGGNAVFTFPPPPIKCAGAPQKIMYLAEDYFRKHGLRDKSRVVYYCATPTIFSAPKYAASLMEQVVKPRNIEVHFKHNLVELRPASKEAVFKNLDTGENVVQPYDMIHVVPPMSAPDFLKKSPLGNEGGWVDVNKDTLQHVRYPNVFSLGDASSLPTSKTAAAVRAQSPILTANLLSVMNGGQPVAKYDGYTSCPLITGYGKLILAEFDYDLKPKETF-----PF-DQGKERYSMYLLKRYIIPVIYWQGLLKG 395          
BLAST of NO03G04050 vs. NCBI_GenBank
Match: WP_086135751.1 (NAD(P)/FAD-dependent oxidoreductase [Methylocaldum sp. SAD2])

HSP 1 Score: 404.1 bits (1037), Expect = 6.500e-109
Identity = 190/401 (47.38%), Postives = 258/401 (64.34%), Query Frame = 0
Query:   64 HHKIMILGGGTGGCGVAAQLLNEGVLAKDICILEPATTHYYQPLWTMVGAGIFDVAVSARPMSSTIPNGVTWLRDSAIKVAPDDNQVQCASGRKLSYDYLVVATGLQCDWDKVPGLAEALVDHEKTGVCSNYHPQYAQNTWRVLEGLRNGSALFTQPKTPVKCGGAPQKIMWLTDDYLRRQNRRGDVDIHFVLPQKVHFGVSKYAEVLKTEAT-TRDIDFMFETTLVSVDGVQHRATFRRLSDGSEFELPFAMLHVTPPMSAPDFLKGSPLANEQGFVAVDKYTTQHITYPNVFSLGDSSSLPTSKTMAAITGEAPVLTHNLLRVMQGKRPTAEYDGFTSCPIVLGYGKLLMTEFVYDCIPQESFTKIPLPFLDQGKPSYFYFLVKKYVFPFVYWNLFMKG 464
            HH+++++GGG  G G+AA+LL+ G+   D+ I+EP+  HYYQP WT VG G+     S +PM+  IP G TW+RD+A +  P +N ++   G+++ YDYLVV  GLQ DWDK+PG+ EA+    K GVCSNY       TW  +   + G+A+FT P  P+KC GAPQKIM+L +DY R+   R    + +       F   KYA  L  +    R+I+  F+  LV +      A F+ L  G     P+ M+HV PPMSAPDFLK SPL NE G+V V+K T QH+ YPNVFSLGD+SSLPTSKT AA+  ++P+LT NLL VM G +P A+YDG+TSCP++ GYGKL++ EF YD  P+E+F     PF DQGK  Y  +L+K+Y+ P +YW   +KG
Sbjct:    6 HHRVVVIGGGAAGLGIAARLLHAGI--TDVAIIEPSEKHYYQPFWTFVGGGVVTREQSVKPMAELIPKGATWIRDAAAEFDPANNSLKTEGGKEIGYDYLVVCPGLQIDWDKIPGVKEAV---GKDGVCSNYSYDTVNTTWENIRNFKGGNAVFTFPPPPIKCAGAPQKIMYLAEDYFRKHGLRDKSRVVYYCATPTIFSAPKYAASLMEQVVKPRNIEVHFKHNLVELRPASKEAVFKNLDTGESVVQPYDMIHVVPPMSAPDFLKKSPLGNEGGWVDVNKDTLQHVRYPNVFSLGDASSLPTSKTAAAVRAQSPILTANLLSVMNGGQPVAKYDGYTSCPLITGYGKLILAEFDYDLKPKETF-----PF-DQGKERYSMYLLKRYIIPVIYWQGLVKG 395          
BLAST of NO03G04050 vs. NCBI_GenBank
Match: BBA34351.1 (NAD(FAD)-dependent dehydrogenase [Methylocaldum marinum])

HSP 1 Score: 402.1 bits (1032), Expect = 2.500e-108
Identity = 191/401 (47.63%), Postives = 257/401 (64.09%), Query Frame = 0
Query:   64 HHKIMILGGGTGGCGVAAQLLNEGVLAKDICILEPATTHYYQPLWTMVGAGIFDVAVSARPMSSTIPNGVTWLRDSAIKVAPDDNQVQCASGRKLSYDYLVVATGLQCDWDKVPGLAEALVDHEKTGVCSNYHPQYAQNTWRVLEGLRNGSALFTQPKTPVKCGGAPQKIMWLTDDYLRRQNRRGDVDIHFVLPQKVHFGVSKYA-EVLKTEATTRDIDFMFETTLVSVDGVQHRATFRRLSDGSEFELPFAMLHVTPPMSAPDFLKGSPLANEQGFVAVDKYTTQHITYPNVFSLGDSSSLPTSKTMAAITGEAPVLTHNLLRVMQGKRPTAEYDGFTSCPIVLGYGKLLMTEFVYDCIPQESFTKIPLPFLDQGKPSYFYFLVKKYVFPFVYWNLFMKG 464
            HH+++++GGG  G G+AA++L+ G+   D+ I+EP+  HYYQP WT VG G+     S +PM+  IP G TW+RD+A +  P +N ++   G+++SYDYLVV  GLQ DWDK+PG+ EA+    K GVCSNY       TW  +   + G+A+FT P  P+KC GAPQKIM+L +D+ R+   R    I F       F V KYA  +++     R I+  F+  LV +      A F+ L  G     P+ M+HV PPMSAPDFLK SPL NE G+V V K T QH+ YPNVF +GD+SSLPTSKT AAI  ++PVL  NLL VM G +P A+YDG+TSCP++ GYGKL++ EF YD  PQE+F     PF DQGK  Y  +L+K+Y+ P +YW   +KG
Sbjct:    6 HHRVVVIGGGAAGLGIAARVLHAGI--TDVAIVEPSDKHYYQPFWTFVGGGVVSREQSVKPMADLIPKGATWIRDAAAEFDPANNSLKTQGGKEISYDYLVVCPGLQIDWDKIPGVKEAV---GKDGVCSNYSYDTVNTTWENIRNFKGGNAVFTFPPPPIKCAGAPQKIMYLAEDHFRKHGLRDKSRIIFYCATPTIFSVPKYAISLMEQVVKPRHIEVHFKHNLVELRPASKEAVFKNLDTGDTIVQPYDMIHVVPPMSAPDFLKKSPLGNEGGWVDVSKDTLQHVRYPNVFGIGDASSLPTSKTAAAIRAQSPVLAANLLSVMNGGQPVAKYDGYTSCPLITGYGKLILAEFDYDLKPQETF-----PF-DQGKERYSMYLLKRYIIPAIYWKGLLKG 395          
BLAST of NO03G04050 vs. NCBI_GenBank
Match: OJW10279.1 (pyridine nucleotide-disulfide oxidoreductase [Planctomycetales bacterium 71-10])

HSP 1 Score: 397.5 bits (1020), Expect = 6.100e-107
Identity = 197/401 (49.13%), Postives = 252/401 (62.84%), Query Frame = 0
Query:   64 HHKIMILGGGTGGCGVAAQLLNEGVLAKDICILEPATTHYYQPLWTMVGAGIFDVAVSARPMSSTIPNGVTWLRDSAIKVAPDDNQVQCASGRKLSYDYLVVATGLQCDWDKVPGLAEALVDHEKTGVCSNYHPQYAQNTWRVLEGLRNGSALFTQPKTPVKCGGAPQKIMWLTDDYLRRQNRRGDVDIHFVLPQKVHFGVSKYAEVLKTEATTRDIDFMFETTLVSVDGVQHRATFRRLSDGSEFELPFAMLHVTPPMSAPDFLKGSPLANEQGFVAVDKYTTQHITYPNVFSLGDSSSLPTSKTMAAITGEAPVLTHNLLRVMQGKRPTAEYDGFTSCPIVLGYGKLLMTEFVYDCIPQESFTKIPLPFLDQGKPSYFYFLVKKYVFPFVYWNLFMKGR 465
            HH+I+I+GGGT G  VAA+L  + +   DI ++EP+  HYYQPLWT+VG G+F    S R  +  IP G TW+RD+     PD+N V    GR++ YDYLVVA G+Q DW  V GL E L  H   GVCSNYH +    TW  +   R G+ALFT P TPVKCGGAPQKIM+L DD  RR   R    + F       F V KYA  L+     R I+ +F   L++V      A FRR + G E  L + M+HVTPPMSAPDF+K SPLA+  G+V VDK+T +H+ YPNVF LGD+S+LPTSKT AA+  +APV+  NL   M+G+ P A YDG+TSCP+V GYGKL++ EF YD   QE+F       LDQ +     +L+KKY  P  YW+  ++GR
Sbjct:    6 HHRIVIVGGGTAGLTVAARLARK-LKRPDIAVIEPSAKHYYQPLWTLVGGGVFPKQASERDEADFIPKGATWVRDAVDGFRPDENSVTTRGGREIGYDYLVVAPGIQIDWGAVEGLKEHLGSH---GVCSNYHYRTVDYTWECIRSFRGGTALFTNPSTPVKCGGAPQKIMYLADDRFRRAGVRDGARVAFASAAGSIFAVEKYARTLEGVIARRGIETLFGHDLIAVRPEAKEAVFRRTASGDEVVLAYDMIHVTPPMSAPDFIKRSPLADAAGWVDVDKHTLRHVRYPNVFGLGDASNLPTSKTGAAVRKQAPVVVTNLASAMRGEPPVARYDGYTSCPLVTGYGKLVLAEFDYDKNSQETFP------LDQSEERLSMYLLKKYGLPAFYWHGMLRGR 396          
BLAST of NO03G04050 vs. NCBI_GenBank
Match: WP_068422481.1 (NAD(P)/FAD-dependent oxidoreductase [Planctomyces sp. SH-PL62] >AMV40211.1 Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor [Planctomyces sp. SH-PL62])

HSP 1 Score: 397.1 bits (1019), Expect = 8.000e-107
Identity = 195/405 (48.15%), Postives = 259/405 (63.95%), Query Frame = 0
Query:   60 ASTDHHKIMILGGGTGGCGVAAQLLNEGVLAKDICILEPATTHYYQPLWTMVGAGIFDVAVSARPMSSTIPNGVTWLRDSAIKVAPDDNQVQCASGRKLSYDYLVVATGLQCDWDKVPGLAEALVDHEKTGVCSNYHPQYAQNTWRVLEGLRNGSALFTQPKTPVKCGGAPQKIMWLTDDYLRRQNRRGDVDIHFVLPQKVHFGVSKYAEVLKTEATTRDIDFMFETTLVSVDGVQHRATFRRLSDGSEFELPFAMLHVTPPMSAPDFLKGSPLANEQGFVAVDKYTTQHITYPNVFSLGDSSSLPTSKTMAAITGEAPVLTHNLLRVMQGKRPTAEYDGFTSCPIVLGYGKLLMTEFVYDCIPQESFTKIPLPFLDQGKPSYFYFLVKKYVFPFVYWNLFMKGR 465
            A   HH I+I+GGGT G  VAA+L+ + +   DI ++EP+  HYYQPLWT+VG G+F    S R  +  IP GVTW+RD+  +  PD+N V    GR++ YD+LVVA G+Q DW KV GL E +  H   GVCSNY  +    TW  +   R G+ALFT P TPVKCGGAPQKIM+L DD+ R+   RG   + F       F V +YA  L+     R I+ +F   L++V      A FRR   G E  L + M+HVTPPMSAPDF+K SPLA++ G+V VDK+T +H  YPNVF LGD+S+LPTSKT AA+  +APV+  NL+  M+G+ P A YDG+TSCP+V G+G+L++ EF YD  P E+F     PF DQ +     +L+KKY  P +YW+  ++GR
Sbjct:    2 AGDSHHGIVIVGGGTAGITVAARLVRK-LKRPDIAVIEPSAKHYYQPLWTLVGGGVFPKRASEREEADFIPKGVTWVRDAVTEFRPDENLVLTRDGREIGYDFLVVAPGIQLDWSKVEGLKEGVGSH---GVCSNYDYRTVDYTWECIRSFRGGTALFTNPSTPVKCGGAPQKIMYLADDHFRKAGVRGGSKVAFASAVGSIFAVERYARTLEGVIARRGIETLFGHDLIAVRPEAKEAVFRRTGSGDEVVLAYDMIHVTPPMSAPDFIKRSPLADDSGWVDVDKHTLRHARYPNVFGLGDASNLPTSKTGAAVRKQAPVVVGNLVSAMRGEPPVARYDGYTSCPLVTGHGRLVLAEFDYDKAPAETF-----PF-DQSRERRSMYLLKKYGLPALYWHGMLRGR 396          
BLAST of NO03G04050 vs. NCBI_GenBank
Match: KRF59442.1 (pyridine nucleotide-disulfide oxidoreductase [Bacillus sp. Soil745])

HSP 1 Score: 395.6 bits (1015), Expect = 2.300e-106
Identity = 189/402 (47.01%), Postives = 257/402 (63.93%), Query Frame = 0
Query:   64 HHKIMILGGGTGGCGVAAQLLNEG-VLAKDICILEPATTHYYQPLWTMVGAGIFDVAVSARPMSSTIPNGVTWLRDSAIKVAPDDNQVQCASGRKLSYDYLVVATGLQCDWDKVPGLAEALVDHEKTGVCSNYHPQYAQNTWRVLEGLRNGSALFTQPKTPVKCGGAPQKIMWLTDDYLRRQNRRGDVDIHFVLPQKVHFGVSKYAEVLKTEATTRDIDFMFETTLVSVDGVQHRATFRRLSDGSEFELPFAMLHVTPPMSAPDFLKGSPLANEQGFVAVDKYTTQHITYPNVFSLGDSSSLPTSKTMAAITGEAPVLTHNLLRVMQGKRPTAEYDGFTSCPIVLGYGKLLMTEFVYDCIPQESFTKIPLPFLDQGKPSYFYFLVKKYVFPFVYWNLFMKGR 465
            H+KI+I+GGG+ G  VAA+LL E   L+ ++ I+EPAT HYYQPLWT+VGAG  D  V+ R  +S IP+G  W++D+     PD+N V  ASG+KL Y+YLVVA G+Q DW K+ GL E++    K GVCSNY   Y   TW  +   + G+++FT P TPVKCGGAPQKIM++ +DY R+   R    + FV      F V KY + L      ++I+  F   L+ +DG   RATF  L+      + + M+HV PPMSAPDF+K S LA   G++ VDKYT QH  Y N+F +GD ++LPTSKT AAI  +APVL  NLL  M+ K    +YDG+TSCP+V GYG+L++ EF YD  PQE+F       +DQ +  +  +L+KK + P +YWN  +KG+
Sbjct:    6 HYKILIVGGGSAGITVAARLLRESRTLSGNVAIIEPATKHYYQPLWTLVGAGEADKTVTQREEASVIPSGAVWVQDAITTFEPDENAVVTASGKKLHYEYLVVAAGIQIDWHKIKGLKESI---GKNGVCSNYSYDYVDGTWEAIRNFKGGTSIFTNPNTPVKCGGAPQKIMYMAEDYFRKSGVREQSSVIFVSGSPSIFNVKKYEQALNKIIERKEIETYFMHHLIEIDGENKRATFENLNTKERVNMHYDMIHVVPPMSAPDFIKNSSLAASNGWLNVDKYTLQHQHYDNIFGIGDCTNLPTSKTGAAIRKQAPVLVKNLLHRMRAKLMVHKYDGYTSCPLVTGYGRLILAEFNYDLQPQETFP------IDQSRERFSMYLLKKNLLPIMYWNGMLKGK 398          
BLAST of NO03G04050 vs. NCBI_GenBank
Match: WP_082609219.1 (NAD(P)/FAD-dependent oxidoreductase [Bacillus sp. Soil745])

HSP 1 Score: 395.6 bits (1015), Expect = 2.300e-106
Identity = 189/402 (47.01%), Postives = 257/402 (63.93%), Query Frame = 0
Query:   64 HHKIMILGGGTGGCGVAAQLLNEG-VLAKDICILEPATTHYYQPLWTMVGAGIFDVAVSARPMSSTIPNGVTWLRDSAIKVAPDDNQVQCASGRKLSYDYLVVATGLQCDWDKVPGLAEALVDHEKTGVCSNYHPQYAQNTWRVLEGLRNGSALFTQPKTPVKCGGAPQKIMWLTDDYLRRQNRRGDVDIHFVLPQKVHFGVSKYAEVLKTEATTRDIDFMFETTLVSVDGVQHRATFRRLSDGSEFELPFAMLHVTPPMSAPDFLKGSPLANEQGFVAVDKYTTQHITYPNVFSLGDSSSLPTSKTMAAITGEAPVLTHNLLRVMQGKRPTAEYDGFTSCPIVLGYGKLLMTEFVYDCIPQESFTKIPLPFLDQGKPSYFYFLVKKYVFPFVYWNLFMKGR 465
            H+KI+I+GGG+ G  VAA+LL E   L+ ++ I+EPAT HYYQPLWT+VGAG  D  V+ R  +S IP+G  W++D+     PD+N V  ASG+KL Y+YLVVA G+Q DW K+ GL E++    K GVCSNY   Y   TW  +   + G+++FT P TPVKCGGAPQKIM++ +DY R+   R    + FV      F V KY + L      ++I+  F   L+ +DG   RATF  L+      + + M+HV PPMSAPDF+K S LA   G++ VDKYT QH  Y N+F +GD ++LPTSKT AAI  +APVL  NLL  M+ K    +YDG+TSCP+V GYG+L++ EF YD  PQE+F       +DQ +  +  +L+KK + P +YWN  +KG+
Sbjct:    9 HYKILIVGGGSAGITVAARLLRESRTLSGNVAIIEPATKHYYQPLWTLVGAGEADKTVTQREEASVIPSGAVWVQDAITTFEPDENAVVTASGKKLHYEYLVVAAGIQIDWHKIKGLKESI---GKNGVCSNYSYDYVDGTWEAIRNFKGGTSIFTNPNTPVKCGGAPQKIMYMAEDYFRKSGVREQSSVIFVSGSPSIFNVKKYEQALNKIIERKEIETYFMHHLIEIDGENKRATFENLNTKERVNMHYDMIHVVPPMSAPDFIKNSSLAASNGWLNVDKYTLQHQHYDNIFGIGDCTNLPTSKTGAAIRKQAPVLVKNLLHRMRAKLMVHKYDGYTSCPLVTGYGRLILAEFNYDLQPQETFP------IDQSRERFSMYLLKKNLLPIMYWNGMLKGK 401          
The following BLAST results are available for this feature:
BLAST of NO03G04050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29872.12.200e-20569.42fad-dependent pyridine nucleotide-disulfide oxidor... [more]
XP_005853537.11.200e-16875.00fad-dependent pyridine nucleotide-disulfide oxidor... [more]
WP_026609605.11.700e-10948.02NAD(P)/FAD-dependent oxidoreductase [Methylocaldum... [more]
WP_077730346.15.000e-10947.38NAD(P)/FAD-dependent oxidoreductase [Methylocaldum... [more]
WP_086135751.16.500e-10947.38NAD(P)/FAD-dependent oxidoreductase [Methylocaldum... [more]
BBA34351.12.500e-10847.63NAD(FAD)-dependent dehydrogenase [Methylocaldum ma... [more]
OJW10279.16.100e-10749.13pyridine nucleotide-disulfide oxidoreductase [Plan... [more]
WP_068422481.18.000e-10748.15NAD(P)/FAD-dependent oxidoreductase [Planctomyces ... [more]
KRF59442.12.300e-10647.01pyridine nucleotide-disulfide oxidoreductase [Baci... [more]
WP_082609219.12.300e-10647.01NAD(P)/FAD-dependent oxidoreductase [Bacillus sp. ... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL066nonsL066Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR048ngnoR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005455NSK005455Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G04050.1NO03G04050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572847gene_1601Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100106g13gene765Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G04050.1NO03G04050.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G04050 ID=NO03G04050|Name=NO03G04050|organism=Nannochloropsis oceanica|type=gene|length=3070bp
GTCGCGATGTCTCAGTTGCATTTTTTTTGTCTTTTACCTGCTTCTCATCT
CTCATCTCCGCCTCCTTTCATAAGTGCACTAGCACAGTGCAAATCATCTT
CCCCTACTCATCTGCCGACCTTTCTCCATTTCGCTTCCTTCAGTCAGTCC
GCTGGCCTCTTCTCGTTCTCCCGGCAAGCCTCTCACACACTTTTCCTGGT
TACCATCCTCCCATTTCTCCTTCCTTCTCCTCCCCAGACTCCTCTTTTTA
GGGTTTCAACGTCAAGGGTCCCGCAGCCTTGGGCACCTTGGTGATGCAGA
CTCGGTACTTCTTCCCATCGCTGCCTTTGAGCTCGCATGAGCCGCACTTT
CCCTCCTCACAGCCATAGTTGGGGCTAAATTTCGCTTTCGCAGCCACGGC
TTTGAGTGCTTCACCTGGCTTGGCCTTGGCCTTCTTATTTCCGGGGAAGA
TTACCTCGACGTCGCCATTGAAAACGGGGCCGCCACGCTTCACGCCATAT
GTGTGGGGGGCTTGCGGGAGGAAAAAGGCAGAAGTGGTCAGCACCAAGGC
CAAGGTTTGGACGAAACGAAAGGCCATCATCTTGCCTCGGGTGATCTGTG
TTGACATGTGTGTGGAAGGAGAAGATCGACGAGTTGAGACGTCCTTTTGC
AGTGTGTTTGCCCGATGATTGTGAAGCGTGGGAGAAGGGGAGGCGAATAG
GCCTTGCTGCGGGTGGAGCCGAGTTATAAGGCTGTTGGGGTTGACCTTGC
GAGTCCATTGCTTGTTAGATGGCATCGGGTGCTTGCTTCTGTCCTTTCGT
GTAAGTACGTTGCTCAGTGGATTGGGAAGAGAAGGCATTCCAAGTGTTTG
GGTCAGTGTACCACTCTGCCAAGGGGTGGGGAGGTCGAGGGGTTTGTTGT
TGCTACTTAATCAAAGTGCACCAAGCAAATGCCACAACAAAAAGACAAAA
CACCTCGCTTTAAACTCTGACAGTACATCAACCTGTCTGCCACTTCTGTC
CGCCCGATCCGCCGTCAGATGGAGCGACTCGCTGATATTTGAGGCGAGAG
ACCGCGGTGCTCCACTTGGCTACGGGGTTCGACTTGAGGCTTTGCACTCG
GTTTTCGTAATCCAATCGGCAGACGATCGGAAAAAGTATACTACGGTAGG
AAGAATCAAGTCCTTTGTTTCATTTTGGTGGCTGTGCTGAAGGCCTTTCG
TCTTCTTTTTCATTTCTATTTATGCAATCCGGTAGGAGCTCATCCCTCCC
CTCAGAAGAACCATATGCTCCTTGGCTGCTGCTATATTCAATCATTTTTA
TAAGACCGATCAATCTCTTGTATGTATCCATCCATTGAACACTAGATATA
AGATGAAAATTTTCATCATTCTTGCCGTCCTCACTGCCGCCTCAATGGTA
GAAGATGTACAAGCATTTATCCTGCGACCGTGCCTGTCCTGCGGGACATA
CCAACCTCAACAATCCCGCAAGCGTCTTGCAGTCACTACCCTCGCCTCCC
CCTCCACCATCAGCGACACCATTTACGCAGCTTCAACGGACCATCATAAA
ATAATGATCCTGGGTGGGGGGACCGGCGGGTGCGGTGTGGCGGCCCAGTT
GCTCAACGAGGGTGTGCTGGCCAAAGACATCTGCATTCTGGAGCCCGCTA
CAACACATTACTATCAGCCGCTGTGGACCATGGTTGGTGCCGGCATATTC
GATGTGGCTGTGTCCGCTCGGCCAATGTCTAGCACTATCCCAAACGGCGT
CACGTGGCTCAGAGACTCCGCTATTAAAGTGGCACCTGACGATAACCAGG
TGCAATGCGCCAGCGGGCGGAAGCTTTCGTATGACTATTTGGTTGTGGCG
ACCGGCCTGCAATGCGACTGGGATAAGGTCCCGGGACTGGCAGAGGCCTT
AGTTGACCATGAAAAGACGGGTGTTTGCTCCAATTACCATCCACAGTACG
CTCAAAATACCTGGCGCGTTTTGGAAGGCCTGCGAAACGGCAGCGCCCTC
TTCACCCAGCCCAAGACGCCTGTCAAGTGTGGAGgtgagaaatttagtat
ctatctctcaatttgctgatgaacgatgaagattcttcacaccatcattc
cttcaccatgcacaagcagGCGCTCCGCAAAAAATCATGTGGCTCACCGA
CGATTACTTGCGCCGGCAAAACCGCCGAGGAGATGTGGATATTCATTTTG
TTTTGCCTCAAAAGGTCCACTTTGGCGTCTCTAAGTACGCAGAGGTGCTG
AAAACCGAAGCCACGACCCGGGATATAGACTTCATGTTTGAGACGACGCT
GGTTTCTGTGGATGGAGTGCAGCACCGAGCGACCTTCCGACGCCTTTCTG
ATGGGAGCGAGTTCGAGTTGCCCTTTGCCATGCTTCATGTGACCCCTCCC
ATGTCCGCACCGGACTTCCTCAAAGGCAGTCCTCTGGCCAATGAGCAAGG
TTTTGTGGCGGTTGACAAATATACGACTCAGCACATCACCTACCCCAACG
TTTTTTCCCTCGGCGACTCCTCCTCCTTACCCACCTCCAAGACCATGGCG
GCCATCACCGGCGAAGCACCGGTATTAACCCACAACCTTTTACGTGTCAT
GCAAGGAAAGCGACCCACGGCCGAGTACGACGGGTTCACTTCATGTCCGA
TTGTTTTGGGTTATGGGAAGCTTTTGATGACAGAGTTTGTGTATGATTGC
ATTCCACAGGAATCCTTCACCAAGATCCCTTTGCCGTTTTTGGATCAGGG
GAAGCCCTCATACTTTTATTTTCTCGTGAAAAAATACGTGTTCCCCTTTG
TGTACTGGAATTTGTTTATGAAGGGAAGATGGTTTGGCAGCAAATTAGTG
TTTAAGCCCGACTTCTCCGAGGTGGACCGCCGGGCGGACGAAGAGGACAA
AAAGAATGCTGTGGCGAGAGGACGCTTGGGCGAGAAGTTTTAGGAGAGAA
AGAGAGAGCGGTGTTGCTTCTTTATGGCATTATGTACATAGCCGAGGACA
GGAACGAGTCAAGGAAATAGGCAGCTCATAGTTAATGCAAGACAGACCCA
TCGGATGCTGCACATTTATT
back to top

protein sequence of NO03G04050.1

>NO03G04050.1-protein ID=NO03G04050.1-protein|Name=NO03G04050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=502bp
MKIFIILAVLTAASMVEDVQAFILRPCLSCGTYQPQQSRKRLAVTTLASP
STISDTIYAASTDHHKIMILGGGTGGCGVAAQLLNEGVLAKDICILEPAT
THYYQPLWTMVGAGIFDVAVSARPMSSTIPNGVTWLRDSAIKVAPDDNQV
QCASGRKLSYDYLVVATGLQCDWDKVPGLAEALVDHEKTGVCSNYHPQYA
QNTWRVLEGLRNGSALFTQPKTPVKCGGAPQKIMWLTDDYLRRQNRRGDV
DIHFVLPQKVHFGVSKYAEVLKTEATTRDIDFMFETTLVSVDGVQHRATF
RRLSDGSEFELPFAMLHVTPPMSAPDFLKGSPLANEQGFVAVDKYTTQHI
TYPNVFSLGDSSSLPTSKTMAAITGEAPVLTHNLLRVMQGKRPTAEYDGF
TSCPIVLGYGKLLMTEFVYDCIPQESFTKIPLPFLDQGKPSYFYFLVKKY
VFPFVYWNLFMKGRWFGSKLVFKPDFSEVDRRADEEDKKNAVARGRLGEK
F*
back to top
Synonyms
Publications