NO03G03930, NO03G03930 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G03930 vs. NCBI_GenBank
Match: XP_005832831.1 (hypothetical protein GUITHDRAFT_108300 [Guillardia theta CCMP2712] >EKX45851.1 hypothetical protein GUITHDRAFT_108300 [Guillardia theta CCMP2712]) HSP 1 Score: 96.3 bits (238), Expect = 1.100e-16 Identity = 42/74 (56.76%), Postives = 53/74 (71.62%), Query Frame = 0 Query: 6 VYVGNLDPDATDRDLDKEFARYGKIAHIWIARKPPGFAFVTYEDERDAMDACAELNGKSILAQRVRVEISQNTR 80 V+VGNL PDA RDL F +YG+I W+ARKPPGF FV ++D+RDA DAC +L+G ++ RVRVEIS R Sbjct: 2 VFVGNLPPDAEGRDLQDFFRKYGQINDAWVARKPPGFGFVWFDDDRDARDACQDLDGTDLMGNRVRVEISTGRR 75
BLAST of NO03G03930 vs. NCBI_GenBank
Match: XP_012769827.1 (splicing factor, arginine/serine-rich 3, putative [Babesia bigemina] >CDR97641.1 splicing factor, arginine/serine-rich 3, putative [Babesia bigemina]) HSP 1 Score: 96.3 bits (238), Expect = 1.100e-16 Identity = 40/75 (53.33%), Postives = 58/75 (77.33%), Query Frame = 0 Query: 5 KVYVGNLDPDATDRDLDKEFARYGKIAHIWIARKPPGFAFVTYEDERDAMDACAELNGKSILAQRVRVEISQNTR 80 KVY+GNL+P+AT D++ F+++G IA++W+AR+PPGFAFVT+ED RDA DA EL+G Q ++VE+S+ R Sbjct: 12 KVYIGNLNPEATVDDVESLFSKFGTIANVWVARRPPGFAFVTFEDSRDASDAIDELDGTEFKGQNLKVELSKGPR 86
BLAST of NO03G03930 vs. NCBI_GenBank
Match: XP_001610609.1 (splicing factor, arginine/serine-rich 3 [Babesia bovis T2Bo] >EDO07041.1 splicing factor, arginine/serine-rich 3, putative [Babesia bovis] >BAN64825.1 splicing factor, arginine/serine-rich 3, putative [Babesia bovis] >BAN66124.1 splicing factor, arginine/serine-rich 3, putative [Babesia bovis]) HSP 1 Score: 95.9 bits (237), Expect = 1.500e-16 Identity = 40/75 (53.33%), Postives = 57/75 (76.00%), Query Frame = 0 Query: 5 KVYVGNLDPDATDRDLDKEFARYGKIAHIWIARKPPGFAFVTYEDERDAMDACAELNGKSILAQRVRVEISQNTR 80 KVY+GNL+P+AT D++ F+++G I +IW+AR+PPGFAFVT+ED RDA DA EL+G Q ++VE+S+ R Sbjct: 12 KVYIGNLNPEATVEDVESLFSKFGTIGNIWVARRPPGFAFVTFEDPRDATDAIEELDGSEYKGQNLKVELSKGPR 86
BLAST of NO03G03930 vs. NCBI_GenBank
Match: XP_787177.1 (PREDICTED: probable splicing factor, arginine/serine-rich 6 [Strongylocentrotus purpuratus]) HSP 1 Score: 95.5 bits (236), Expect = 2.000e-16 Identity = 40/73 (54.79%), Postives = 56/73 (76.71%), Query Frame = 0 Query: 3 EAKVYVGNLDPDATDRDLDKEFARYGKIAHIWIARKPPGFAFVTYEDERDAMDACAELNGKSILAQRVRVEIS 76 E KVYVGNL A+ +L++ F+RYG++ ++W+AR PPGFAFV +EDERDA DAC L+ +++ RVRVE+S Sbjct: 15 ECKVYVGNLPSGASRTELEEAFSRYGRVKNVWVARNPPGFAFVMFEDERDASDACKALDDRNVCGVRVRVEMS 87
BLAST of NO03G03930 vs. NCBI_GenBank
Match: XP_022187740.1 (serine/arginine-rich splicing factor 7-like isoform X2 [Nilaparvata lugens]) HSP 1 Score: 94.0 bits (232), Expect = 5.700e-16 Identity = 40/78 (51.28%), Postives = 57/78 (73.08%), Query Frame = 0 Query: 2 PEAKVYVGNLDPDATDRDLDKEFARYGKIAHIWIARKPPGFAFVTYEDERDAMDACAELNGKSILAQRVRVEISQNTR 80 P+ K+YVG+L A+ +DL+ F+ YG I ++W+AR PPGFAFV +ED RDA DA L+G+S+ +RVRVE+S +R Sbjct: 11 PDCKIYVGDLGSSASKQDLEDAFSYYGPIRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGRSVCGRRVRVEMSNGSR 88
BLAST of NO03G03930 vs. NCBI_GenBank
Match: XP_020602298.1 (serine/arginine-rich splicing factor 7-like [Orbicella faveolata]) HSP 1 Score: 93.2 bits (230), Expect = 9.700e-16 Identity = 38/72 (52.78%), Postives = 56/72 (77.78%), Query Frame = 0 Query: 5 KVYVGNLDPDATDRDLDKEFARYGKIAHIWIARKPPGFAFVTYEDERDAMDACAELNGKSILAQRVRVEISQ 77 +VYVGNL + + R+L++EF R+G + +W+AR PPGFAFV +ED RDA DAC E++GK I ++VRVE+++ Sbjct: 3 RVYVGNLGKNGSRRELEREFERFGPLRDVWVARNPPGFAFVLFEDARDAEDACHEMDGKYICGEKVRVEMAR 74
BLAST of NO03G03930 vs. NCBI_GenBank
Match: XP_001952396.1 (PREDICTED: serine/arginine-rich splicing factor 7-like [Acyrthosiphon pisum] >XP_022174683.1 serine/arginine-rich splicing factor 7-like [Myzus persicae]) HSP 1 Score: 92.8 bits (229), Expect = 1.300e-15 Identity = 40/74 (54.05%), Postives = 55/74 (74.32%), Query Frame = 0 Query: 2 PEAKVYVGNLDPDATDRDLDKEFARYGKIAHIWIARKPPGFAFVTYEDERDAMDACAELNGKSILAQRVRVEIS 76 P+ K+YVG+L A+ +DL+ F+ YG I ++W+AR PPGFAFV +ED RDA DA L+G+SI +RVRVE+S Sbjct: 13 PDCKIYVGDLGSSASKQDLEDAFSYYGSIRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGRSICGRRVRVELS 86
BLAST of NO03G03930 vs. NCBI_GenBank
Match: XP_015375652.1 (PREDICTED: serine/arginine-rich splicing factor 7-like [Diuraphis noxia]) HSP 1 Score: 92.8 bits (229), Expect = 1.300e-15 Identity = 40/74 (54.05%), Postives = 55/74 (74.32%), Query Frame = 0 Query: 2 PEAKVYVGNLDPDATDRDLDKEFARYGKIAHIWIARKPPGFAFVTYEDERDAMDACAELNGKSILAQRVRVEIS 76 P+ K+YVG+L A+ +DL+ F+ YG I ++W+AR PPGFAFV +ED RDA DA L+G+SI +RVRVE+S Sbjct: 13 PDCKIYVGDLGSSASKQDLEDAFSYYGSIRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGRSICGRRVRVELS 86
BLAST of NO03G03930 vs. NCBI_GenBank
Match: XP_021608202.1 (serine/arginine-rich splicing factor RSZ22A-like [Manihot esculenta] >OAY53546.1 hypothetical protein MANES_03G004900 [Manihot esculenta]) HSP 1 Score: 92.8 bits (229), Expect = 1.300e-15 Identity = 41/76 (53.95%), Postives = 58/76 (76.32%), Query Frame = 0 Query: 4 AKVYVGNLDPDATDRDLDKEFARYGKIAHIWIARKPPGFAFVTYEDERDAMDACAELNGKSILAQRVRVEISQNTR 80 ++VYVGNLDP T+RDL+ EF R+G I +W+AR+PPG+AF+ ++D+RDA DA EL+GK+ RVE+S N+R Sbjct: 2 SRVYVGNLDPRVTERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAEDAIHELDGKN----GWRVELSHNSR 73
BLAST of NO03G03930 vs. NCBI_GenBank
Match: XP_020613936.1 (probable splicing factor, arginine/serine-rich 6 [Orbicella faveolata]) HSP 1 Score: 92.8 bits (229), Expect = 1.300e-15 Identity = 38/73 (52.05%), Postives = 56/73 (76.71%), Query Frame = 0 Query: 5 KVYVGNLDPDATDRDLDKEFARYGKIAHIWIARKPPGFAFVTYEDERDAMDACAELNGKSILAQRVRVEISQN 78 KVYVGNL + + ++L++EF R+G++ +W+AR PPGFAFV +E+ RDA DAC L+G I +RVRVE+++N Sbjct: 11 KVYVGNLGNNGSKKELEREFERFGRLHDVWVARNPPGFAFVEFEEYRDAEDACKSLDGARICGERVRVEMARN 83 The following BLAST results are available for this feature:
BLAST of NO03G03930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G03930 ID=NO03G03930|Name=NO03G03930|organism=Nannochloropsis oceanica|type=gene|length=2828bpback to top protein sequence of NO03G03930.1 >NO03G03930.1-protein ID=NO03G03930.1-protein|Name=NO03G03930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=198bpback to top Synonyms
Publications
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