NO03G03780, NO03G03780 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G03780 vs. NCBI_GenBank
Match: EWM29833.1 (elongation of very long chain fatty acids protein 6 [Nannochloropsis gaditana]) HSP 1 Score: 563.1 bits (1450), Expect = 5.700e-157 Identity = 268/320 (83.75%), Postives = 292/320 (91.25%), Query Frame = 0 Query: 1 MSWFLDPAPLYETSEYVTRDPVNPVRFVQVFQSIPALEPLYTEWEKNFNVKESYRIIRDNCWVPVIAVILYLSFLVEGRNYVERRKKAGKGPVNLGRFPAIWNGFLAIFSILGALRVVPHFLFLFTHKDFKETVCEAPDTAGYGDGAAGMWVMLFTVSKVFELMDTVILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNPGLYFVAMNYTVHAVMYSYYFLMEIKLWPKWLSPIFITLMQISQMLVGVGITAAAYIFQRDPSCGVVRDLIPWCAAMYATYLYFFVEFFVERFLAASSTKAGKEEGKGGKSQLAKKDIGTA 321 MSWFLDPAPLYETS+Y+TRDPV PVRFVQVFQ+IPALEP YTEWEK+F+V +R IRD+ WVP++AVILYLSFLVEG+ Y+ERRKK GKGPVNLG FPA+WNGFLA+FSI GALRVVPHFLFLFTHKDFKETVCEAPD AGYGDGAAG+WVMLFTVSKVFELMDTVILVLKGK+PMFLHWYHHVTVLLYTWFSYSARNPGLYF+AMNYTVHAVMYSYYFLME++LWPKWLSP+FITLMQISQMLVGVG+TAAAY +Q DPSC VVRDLIPWCAAMYATYLYFFVEFFVERFLAAS+ + S+LA KDIG A Sbjct: 1 MSWFLDPAPLYETSQYITRDPVKPVRFVQVFQAIPALEPFYTEWEKHFDVSAPFRAIRDSKWVPIMAVILYLSFLVEGKKYIERRKKEGKGPVNLGYFPALWNGFLALFSIAGALRVVPHFLFLFTHKDFKETVCEAPDAAGYGDGAAGLWVMLFTVSKVFELMDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGLYFIAMNYTVHAVMYSYYFLMELRLWPKWLSPVFITLMQISQMLVGVGVTAAAYSYQADPSCAVVRDLIPWCAAMYATYLYFFVEFFVERFLAASTKRT-------PVSKLASKDIGAA 313
BLAST of NO03G03780 vs. NCBI_GenBank
Match: EWM21810.1 (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 469.9 bits (1208), Expect = 6.600e-129 Identity = 214/277 (77.26%), Postives = 246/277 (88.81%), Query Frame = 0 Query: 6 DPAPLYETSEYVTRDPVNPVRFVQVFQSIPALEPLYTEWEKNFNVKESYRIIRDNCWVPVIAVILYLSFLVEGRNYVERRKKAGKGPVNLGRFPAIWNGFLAIFSILGALRVVPHFLFLFTHKDFKETVCEAPDTAGYGDGAAGMWVMLFTVSKVFELMDTVILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNPGLYFVAMNYTVHAVMYSYYFLMEIKLWPKWLSPIFITLMQISQMLVGVGITAAAYIFQRDPSCGVVRDLIPWCAAMYATYLY 283 DP PLY +S Y T DP +PVRFVQVFQS+P LEP Y EWEKNF+V S+++IRDN +P++A ILYLSFL+EG+ Y+ERR++ GKGP+NLG FPA WN FLA FS+LGA RVVPHFLFLFTHKDFK TVCEAPD AGYGDGAAGMWVMLFTVSK+FEL+DTVILVLKGK+PMFLHWYHHVTVLLYTWFSYSARNPG+YFVAMNY+VHA+MYSYYFLME++LWPKW +P++IT+ QI QMLVGVGIT +A+ F RDPSC +VR LIPWCAAMYATYLY Sbjct: 12 DPRPLYASSRYKTADPESPVRFVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNEALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGITVSAFFFSRDPSCALVRGLIPWCAAMYATYLY 288
BLAST of NO03G03780 vs. NCBI_GenBank
Match: EWM25755.1 (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 285.0 bits (728), Expect = 3.000e-73 Identity = 142/267 (53.18%), Postives = 187/267 (70.04%), Query Frame = 0 Query: 27 FVQVFQSIPALEPLYTEWEKNFNVKESYRIIRDNCWVPVIAVILYLSFLVEGRNYVERRKKAGKGPVNLGRFPAIWNGFLAIFSILGALRVVPHFLFLFTHKDFKETVCEAPDTAGYGDGAAGMWVMLFTVSKVFELMDTVILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNPGLYFVAMNYTVHAVMYSYYFLMEIKLWPKWLSPIFITLMQISQMLVGVGITAAAYIFQRDPS-CGVVRDLIPWCAAMYATYLYFFVEFFVERF 293 F+Q +Q P EP YT EK F+V+ Y + N W+PV+++ILY + ++ +R PV A WN LA FSILGALR+VPH L+ T FKETVC P+ GDGA+G+W +LFT+SK+ EL+DT+ + LKG+ P+FLHWYHHVTVL +TW +YSAR+PG+YF+AMNYTVHAVMYSYYFLM IK PKWL+PI+IT +QI QM+ GV IT +I+ RDPS CGVV ++ + + +Y +YLY F+EF V+RF Sbjct: 37 FLQFWQLFPWSEPFYTRLEKEFDVRPWYLFVHANGWLPVVSIILYAAMVLLLPPITSKR------PVKCDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMN-GDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYSARHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIYARDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRF 296
BLAST of NO03G03780 vs. NCBI_GenBank
Match: XP_005852597.1 (fatty-acyl elongase [Nannochloropsis gaditana CCMP526] >EKU23234.1 fatty-acyl elongase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 266.2 bits (679), Expect = 1.400e-67 Identity = 119/163 (73.01%), Postives = 140/163 (85.89%), Query Frame = 0 Query: 6 DPAPLYETSEYVTRDPVNPVRFVQVFQSIPALEPLYTEWEKNFNVKESYRIIRDNCWVPVIAVILYLSFLVEGRNYVERRKKAGKGPVNLGRFPAIWNGFLAIFSILGALRVVPHFLFLFTHKDFKETVCEAPDTAGYGDGAAGMWVMLFTVSKVFELMDTVI 169 DP PLY +S Y T DP +PVRFVQVFQS+P LEP Y EWEKNF+V S+++IRDN +P++A ILYLSFL+EG+ Y+ERR++ GKGP+NLG FPA WN FLA FS+LGA RVVPHFLFLFTHKDFK TVCEAPD AGYGDGAAG+WVMLFTVSK+FEL+DTV+ Sbjct: 12 DPRPLYASSRYKTADPESPVRFVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNQALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGLWVMLFTVSKLFELVDTVL 174
BLAST of NO03G03780 vs. NCBI_GenBank
Match: EWM28304.1 (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 261.9 bits (668), Expect = 2.700e-66 Identity = 140/288 (48.61%), Postives = 182/288 (63.19%), Query Frame = 0 Query: 27 FVQVFQSIPALEPLYTEWEKNFNVKESYRIIRDNCWVPVIAVILYLSFLVEGRNYVERRKKAGKGPVNLGRFPAIWNGFLAIFSILGALRVVPHFLFLFTHKDFKETVCEAPDTAGYGDGAAGMWVMLFTVSKVFELMDTVILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNPGLYFVAMNYTVHAVMYSYYFLMEIKLWPKWLSPIFITLMQISQMLVGVGITAAAYI--FQRDPSCGVVRDLIPWCAAMYATYLYFFVEFFVERFLAASSTKAGKEEGKGGKSQL 313 F Q+FQ IPA+EP Y EWEK ++ Y ++ WVP+ VILY+ + G+ ++ RK P +L A WN L++FSI+G +RVVPH ++L K C AP+ YG+ A G WV F +SK+ EL+DT +VL+ K FLHWYHHVTVLL+TWF Y+ NPG+ FVAMNY+VHA+MY YYFLM +++ P WL P FITLMQISQM+VGV TAA YI + C V +DL+ C MY+TYLY F EF V RF+ K GK G S++ Sbjct: 41 FTQLFQVIPAIEPFYMEWEKKYDSSPVYEWMKSVPWVPIAGVILYVVGIFGGQALMKNRK-----PFDLKWPLAYWNLALSLFSIMGMVRVVPHLIYLTATKGLGVVACGAPEPL-YGNAAVGFWVQAFILSKLAELIDTAFIVLRKKPLQFLHWYHHVTVLLFTWFCYTHENPGIIFVAMNYSVHAIMYGYYFLMAVRVRPSWLKPQFITLMQISQMVVGVA-TAAFYIMKIRAGEECAVDQDLLVACGVMYSTYLYLFCEFAVRRFIL--GPKKETAPGKAGVSKM 319
BLAST of NO03G03780 vs. NCBI_GenBank
Match: EWM25754.1 (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 259.6 bits (662), Expect = 1.300e-65 Identity = 144/317 (45.43%), Postives = 201/317 (63.41%), Query Frame = 0 Query: 3 WFLDPAPLYETSE-YVTRDPVNPVRFVQVFQSIPALEPLYTEWEKNFNVKESYRIIRDNCWVPVIAVILYLSFLVEGRNYVERRKKAGKGPVNLGRFPAIWNGFLAIFSILGALRVVPHFLFLFTHKDFKETVCEAPDTAGYGDGAAGMWVMLFTVSKVFELMDTVILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNPGLYFVAMNYTVHAVMYSYYFLMEIKLWPKWLSPIFITLMQISQMLVGVGITAAAYIF-QRDPSCGVVRDLIPWCAAMYATYLYFFVEFFVERFLAASSTKAGKEEGKGGKSQLAKKDI 318 W+ P L T+ Y R+ F+Q +Q P LE Y +EKNFN + + N WV I++ +Y+ +++R NL A WN FLA++S +GA+RVVPH L+ + FK+TVC AP GDGA G+WV LFT+SKV EL+D++ + LKG+ P+FLHWYHHV+VL +TW ++ A +PG+YF+AMNYTVH+VMY+YYFLM IK PKWL+PI+IT MQI+QMLVGV I+ + + D SC V ++ A +YA+YLY F++F ++RF + +AG +EGK S AKK+I Sbjct: 16 WYCPPETLTATTRVYTARN--TTYSFIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISLAIYMXXXXXLPMIMKKRPLK-----NLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYIN-GDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHEAAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDASCAVDPFVLKVSAVIYASYLYLFMQFMIKRFF-VKNARAG-QEGKVAAS--AKKNI 320
BLAST of NO03G03780 vs. NCBI_GenBank
Match: EWM29442.1 (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 238.8 bits (608), Expect = 2.500e-59 Identity = 133/284 (46.83%), Postives = 168/284 (59.15%), Query Frame = 0 Query: 25 VRFVQVFQSIPALEPLYTEWEKNFNVKESYRIIRDNCW--VPVIAVILYLSFLVEGRNYVERRKKAGKGPVNLGRFPAIWNGFLAIFSILGALRVVPHFLFLFTHKDFKETVCEAPDTAGYGDGAAGMWVMLFTVSKVFELMDTVILVLKGKNPMFLHWYHHVTVLLYTWFSYS-ARNPGLYFVAMNYTVHAVMYSYYFLMEIKLWPKWLSPIFITLMQISQMLVGVGITAAA--YIFQRDPSCGVVRDLIPWCAAMYATYLYFFVEFFVERFLAASSTKAGKE 304 V F Q+FQ P L P YTE+EKNF+ SY N W +P+ +Y +V G +E R K A WN L++FS G LR VPH L T FK+T+C P YG+GA G+WVMLF SKV EL+DTV +V + FLHWYHH+TVLL+ W SY+ + GLYFVAMNY+VHAVMY+YY+L IK WP W+ P IT+ QISQM+VGVGI A+ Y++ C V + A MY +YLY F +FFV RFL + G+E Sbjct: 29 VPFTQLFQHYPVLSPFYTEYEKNFHA-SSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKH-----EWKTALACWNLLLSVFSFCGMLRTVPHLLHNVTTLPFKDTICRHP-AETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRGGKPRLGEE 305
BLAST of NO03G03780 vs. NCBI_GenBank
Match: ACV21066.1 (fatty acid elongase [Nannochloropsis oculata]) HSP 1 Score: 238.4 bits (607), Expect = 3.200e-59 Identity = 139/298 (46.64%), Postives = 178/298 (59.73%), Query Frame = 0 Query: 25 VRFVQVFQSIPALEPLYTEWEKNFNVKESYRIIRDNCWVPVIAVIL----YLSFLVEGRNYVERRKKAGKGPVNLGRFPAIWNGFLAIFSILGALRVVPHFLFLFTHKDFKETVCEAPDTAGYGDGAAGMWVMLFTVSKVFELMDTVILVLKGKNPMFLHWYHHVTVLLYTWFSYS-ARNPGLYFVAMNYTVHAVMYSYYFLMEIKLWPKWLSPIFITLMQISQMLVGVGITAAAYIF-QRDPS-CGVVRDLIPWCAAMYATYLYFFVEFFVERFLAASSTKAGKEEGKGGKSQLAKK 316 V F Q+FQ P L+PLYT++EKNF + +D W PV+ + L L +V + V R K K + A WN L+IFS G +R VPH L FK+T+C P YG+GA GMWVMLF SKV EL+DTV +V + FLHWYHH+TVLL+ W SY+ + GLYFVAMNY+VHA+MY+YY+L I WPKW+ P IT+ QISQM+VGVGI A+++ F DP C V R + A MY +YLY F +FFV RFL + G+E K +AKK Sbjct: 31 VPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDT-W-PVLPLALCGMYALMIIVGTKVMVSRPKHEWKTAL------ACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHP-AETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKPRLGEE--KSAVLTMAKK 317
BLAST of NO03G03780 vs. NCBI_GenBank
Match: XP_005855601.1 (fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU20764.1 fatty-acyl [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 238.0 bits (606), Expect = 4.200e-59 Identity = 133/284 (46.83%), Postives = 168/284 (59.15%), Query Frame = 0 Query: 25 VRFVQVFQSIPALEPLYTEWEKNFNVKESYRIIRDNCW--VPVIAVILYLSFLVEGRNYVERRKKAGKGPVNLGRFPAIWNGFLAIFSILGALRVVPHFLFLFTHKDFKETVCEAPDTAGYGDGAAGMWVMLFTVSKVFELMDTVILVLKGKNPMFLHWYHHVTVLLYTWFSYS-ARNPGLYFVAMNYTVHAVMYSYYFLMEIKLWPKWLSPIFITLMQISQMLVGVGITAAA--YIFQRDPSCGVVRDLIPWCAAMYATYLYFFVEFFVERFLAASSTKAGKE 304 V F Q+FQ P L P YTE+EKNF+ SY N W +P+ +Y +V G +E R K A WN L++FS G LR VPH L T FK+T+C P YG+GA G+WVMLF SKV EL+DTV +V + FLHWYHH+TVLL+ W SY+ + GLYFVAMNY+VHAVMY+YY+L IK WP W+ P IT+ QISQM+VGVGI A+ Y++ C V + A MY +YLY F +FFV RFL + G+E Sbjct: 29 VPFTQLFQHYPVLSPFYTEYEKNFHA-SSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKH-----EWKTALACWNLLLSVFSFCGMLRTVPHLLQNVTTLPFKDTICRHP-AETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRGGKPRLGEE 305
BLAST of NO03G03780 vs. NCBI_GenBank
Match: ASU87515.1 (long-chain fatty acid elongase [Nannochloropsis sp.]) HSP 1 Score: 223.4 bits (568), Expect = 1.100e-54 Identity = 118/301 (39.20%), Postives = 176/301 (58.47%), Query Frame = 0 Query: 25 VRFVQVFQSIPALEPLYTEWEKNFNVKESYRIIRDNCWVPVIAVILYLSFLVEGRNYVERRKKAGKGPVNLGRFPAIWNGFLAIFSILGALRVVPHFLFLFT---HKDFKETVCEAPDTAGYGDGAAGMWVMLFTVSKVFELMDTVILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNPGLYFVAMNYTVHAVMYSYYFLMEIKLWPKWLSPIFITLMQISQMLVGVGITAAAYIFQ---------RDPSCGVVRDLIPWCAAMYATYLYFFVEFFVERFLAASSTKAGKEEGKGGKSQLA 314 V F ++Q IPAL P YT +EK+F+ S+ + + WVP++A LY +F G + RK +L +WN L++ S GA+RV H L+L + F++T+CE+P+ A Y D A G+W ++FTVSK+ EL+DT+ +VL+ K +FLHWYHH TVLL +WF + P LYF+A+NY++H VMY Y+FLM IK P+W +P+++T+ QISQM VG+ + + ++ C + +I MY+TYL FV+FFV+R+ K +E GK A Sbjct: 31 VPFHPIWQLIPALSPFYTSYEKHFDATASFIFLYRHTWVPLLATALYFAFCYYGPKAMRHRK-----AFDLKTILCLWNLSLSLISFAGAVRVGTHLLYLLSPWGGFSFRDTICESPE-ATYADNATGLWCVVFTVSKLLELVDTIFVVLRKKPLIFLHWYHHATVLLCSWFGHVTFTPALYFMAINYSIHGVMYMYFFLMAIKKVPQWFNPMWLTVAQISQMFVGIWVIVMSCYYKYFEGAQGEGMGKGCAIDGRMIVAICLMYSTYLVLFVKFFVQRYAGQQKRKGAREVAVVGKEDKA 325 The following BLAST results are available for this feature:
BLAST of NO03G03780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G03780 ID=NO03G03780|Name=NO03G03780|organism=Nannochloropsis oceanica|type=gene|length=4738bpback to top protein sequence of NO03G03780.1 >NO03G03780.1-protein ID=NO03G03780.1-protein|Name=NO03G03780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=341bpback to top Synonyms
Publications
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