NO03G03670, NO03G03670 (gene) Nannochloropsis oceanica

Overview
NameNO03G03670
Unique NameNO03G03670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4578
Alignment locationchr3:1088660..1093237 -

Link to JBrowse

Properties
Property NameValue
DescriptionNa( )/H( ) antiporter NhaA
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1088660..1093237 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008233peptidase activity
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO:0019538protein metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029045ClpP/crotonase-like_dom
IPR002142Peptidase_S49
Homology
BLAST of NO03G03670 vs. NCBI_GenBank
Match: EWM29816.1 (family s49 [Nannochloropsis gaditana])

HSP 1 Score: 307.0 bits (785), Expect = 6.500e-80
Identity = 150/203 (73.89%), Postives = 176/203 (86.70%), Query Frame = 0
Query:   98 FAEDVAASGGYWLLAAGQEIYADRASIVGSIGVVSGGFGLHAFLEQHGVERRLHTAGKSKARLDPFLAAKAEDVAHLKETLGEIHEVFKDHIKARRGSKIAGHEDVVFSGDFFTGQKGMELGLVDAIGSLQSVARDKLGEKVKINYINARPRFPLLPGLGTAMSYVGGGDGS-FSLTARLVDDMVGAVEERMEERLWRGRVGL 300
            F +DVAASGGYWLLAAGQE+YAD+ASIVGS+GVVSGGFGLH  LE HG+ERRLHTAG SKARLDPFL A+AEDVA+L++TL EIHEVFK H++ARRG+KI+GHE  +FSGDFFTG +G+ELGLVDAIGSLQSV+++KLGEKV+INY+NARPRFP LPGLGT     G GDGS  S +A L D ++ + EER+EERLWR RVGL
Sbjct:   13 FPQDVAASGGYWLLAAGQEVYADKASIVGSVGVVSGGFGLHKLLEHHGIERRLHTAGTSKARLDPFLPARAEDVAYLRDTLAEIHEVFKAHVRARRGAKISGHESTIFSGDFFTGARGVELGLVDAIGSLQSVSKEKLGEKVRINYLNARPRFPFLPGLGT-----GTGDGSRMSWSAHLADAILESAEERIEERLWRSRVGL 210          
BLAST of NO03G03670 vs. NCBI_GenBank
Match: CBS88623.1 (putative serine protease SohB (plasmid) [Azospirillum lipoferum 4B])

HSP 1 Score: 242.3 bits (617), Expect = 2.000e-60
Identity = 135/289 (46.71%), Postives = 182/289 (62.98%), Query Frame = 0
Query:   16 KLGPIVNAVHLQGMIAARSGP--RGMSFASLEQHLERAFKGMGVHTPDAVALVVNSPGGSPVQSNLIGQKILALQEKHKVPVWSFAEDVAASGGYWLLAAGQEIYADRASIVGSIGVVSGGFGLHAFLEQHGVERRLHTAGKSKARLDPFLAAKAEDVAHLKETLGEIHEVFKDHIKARRGSKIAGHEDVVFSGDFFTGQKGMELGLVDAIGSLQSVARDKLGEKVKINYINARPRFPLLPGL---GTAMSYVGGGDGSFSLTARLVDDMVGAVEERMEERLWRGRVGL 300
            K GP+V+ V L G+I  + GP   G+S A +   LERAF         AVAL+VNSPGGSPVQS LI ++I  L E+ KVPV++F ED AASGGYWL  A  EI+AD +SIVGSIGVVS GFGLH  +E+HG+ERRL+TAG  K  LDPF   + + VAHLK    +IHE FK  ++ RRG+++ G E+ +FSG F+ G+K + LGL+D +G L+SV R + GEKV++  +          GL   G+A  +  G   +F+      D +V A    +++   R R+GL
Sbjct:   41 KAGPLVSVVRLTGVI-GQGGPFRSGLSLAGVAPLLERAF---APKDQKAVALIVNSPGGSPVQSALIAKRIRDLAEEKKVPVFAFCEDAAASGGYWLACAADEIWADESSIVGSIGVVSSGFGLHGLIERHGIERRLYTAGDKKVLLDPFSPEREDGVAHLKALQADIHEAFKAMVRDRRGTRLTGSEEELFSGAFWAGRKALALGLIDGLGDLRSVMRGRFGEKVRLRVVQQERGMLRRLGLRTGGSAPLHDAGAPEAFA------DALVAAARASLDDWAARARLGL 319          
BLAST of NO03G03670 vs. NCBI_GenBank
Match: WP_012975804.1 (S49 family peptidase [Azospirillum lipoferum] >BAI73908.1 serine protease (plasmid) [Azospirillum sp. B510])

HSP 1 Score: 242.3 bits (617), Expect = 2.000e-60
Identity = 132/290 (45.52%), Postives = 183/290 (63.10%), Query Frame = 0
Query:   16 KLGPIVNAVHLQGMIAARSGP--RGMSFASLEQHLERAFKGMGVHTPDAVALVVNSPGGSPVQSNLIGQKILALQEKHKVPVWSFAEDVAASGGYWLLAAGQEIYADRASIVGSIGVVSGGFGLHAFLEQHGVERRLHTAGKSKARLDPFLAAKAEDVAHLKETLGEIHEVFKDHIKARRGSKIAGHEDVVFSGDFFTGQKGMELGLVDAIGSLQSVARDKLGEKVKINYINAR----PRFPLLPGLGTAMSYVGGGDGSFSLTARLVDDMVGAVEERMEERLWRGRVGL 300
            K GP+V+ V L G+I  + GP   G++ A +   L+RAF         AVALVVNSPGGSPVQS LI ++I  L E+ KVPV++F ED AASGGYWL  A  EI+AD +SI+GSIGVVS GFGLH  +E+HG+ERRL+TAG  K  LDPF   + + VAHLK    ++HE FK  +++RRG ++ G E+ +FSG F+ G+K + LGL+D +G ++SV R + GEKV++  +        R  L  G G A +   G   +F+      D +V A  + ++E   + R+GL
Sbjct:   17 KAGPLVSVVRLTGVI-GQGGPLRSGLTLAGVAPLLDRAF---APKDQKAVALVVNSPGGSPVQSALIAKRIRDLAEEKKVPVFAFCEDAAASGGYWLACAADEIWADESSILGSIGVVSSGFGLHGLIERHGIERRLYTAGDRKVLLDPFSPEREDGVAHLKALQADVHEAFKAMVRSRRGDRLKGAEEDLFSGAFWAGRKALALGLIDGLGDIRSVMRGRFGEKVRLRVVERERGLLRRAGLKAGYGDAPALTAGASEAFA------DALVSAARQSLDEWAAKARLGL 296          
BLAST of NO03G03670 vs. NCBI_GenBank
Match: WP_044551397.1 (S49 family peptidase [Azospirillum lipoferum])

HSP 1 Score: 242.3 bits (617), Expect = 2.000e-60
Identity = 135/289 (46.71%), Postives = 182/289 (62.98%), Query Frame = 0
Query:   16 KLGPIVNAVHLQGMIAARSGP--RGMSFASLEQHLERAFKGMGVHTPDAVALVVNSPGGSPVQSNLIGQKILALQEKHKVPVWSFAEDVAASGGYWLLAAGQEIYADRASIVGSIGVVSGGFGLHAFLEQHGVERRLHTAGKSKARLDPFLAAKAEDVAHLKETLGEIHEVFKDHIKARRGSKIAGHEDVVFSGDFFTGQKGMELGLVDAIGSLQSVARDKLGEKVKINYINARPRFPLLPGL---GTAMSYVGGGDGSFSLTARLVDDMVGAVEERMEERLWRGRVGL 300
            K GP+V+ V L G+I  + GP   G+S A +   LERAF         AVAL+VNSPGGSPVQS LI ++I  L E+ KVPV++F ED AASGGYWL  A  EI+AD +SIVGSIGVVS GFGLH  +E+HG+ERRL+TAG  K  LDPF   + + VAHLK    +IHE FK  ++ RRG+++ G E+ +FSG F+ G+K + LGL+D +G L+SV R + GEKV++  +          GL   G+A  +  G   +F+      D +V A    +++   R R+GL
Sbjct:   17 KAGPLVSVVRLTGVI-GQGGPFRSGLSLAGVAPLLERAF---APKDQKAVALIVNSPGGSPVQSALIAKRIRDLAEEKKVPVFAFCEDAAASGGYWLACAADEIWADESSIVGSIGVVSSGFGLHGLIERHGIERRLYTAGDKKVLLDPFSPEREDGVAHLKALQADIHEAFKAMVRDRRGTRLTGSEEELFSGAFWAGRKALALGLIDGLGDLRSVMRGRFGEKVRLRVVQQERGMLRRLGLRTGGSAPLHDAGAPEAFA------DALVAAARASLDDWAARARLGL 295          
BLAST of NO03G03670 vs. NCBI_GenBank
Match: PIW27006.1 (S49 family peptidase [Rhodospirillales bacterium CG15_BIG_FIL_POST_REV_8_21_14_020_66_15])

HSP 1 Score: 241.5 bits (615), Expect = 3.300e-60
Identity = 133/271 (49.08%), Postives = 170/271 (62.73%), Query Frame = 0
Query:   19 PIVNAVHLQGMIAARSG-PRGMSFASLEQHLERAFKGMGVHTPDAVALVVNSPGGSPVQSNLIGQKILALQEKHKVPVWSFAEDVAASGGYWLLAAGQEIYADRASIVGSIGVVSGGFGLHAFLEQHGVERRLHTAGKSKARLDPFLAAKAEDVAHLKETLGEIHEVFKDHIKARRGSKIAGHEDVVFSGDFFTGQKGMELGLVDAIGSLQSVARDKLGEKVKINYINARPRFPLLPGLGTAMSYVGGGDGSFSLTARLVDDMVGAVEERM 289
            P+V  + L G+I +     RG+S +     +ERAFK   +    AVAL VNSPGGSPVQS+LI   I  L E+ +VPV +F EDVAASGGYWL  A  EIYAD +SI+GSIGVVSGGFGL   +E+ GVERRLHTAG+ KA LDPF   K  DV HLK+  G+IH  FKD ++ARRG ++ G E  +FSG F+ G K +ELGLVD +G ++SV R++ GE VK+  +  R  +      G       G D +          +V AVEER+
Sbjct:   25 PVVAVLRLSGVIGSIGAFRRGLSLSGQADAIERAFK---LRNLQAVALAVNSPGGSPVQSSLIAGHIRQLAEEKQVPVVAFCEDVAASGGYWLACAADEIYADASSIIGSIGVVSGGFGLQGLIEKLGVERRLHTAGEKKAMLDPFQPEKPADVKHLKDIQGDIHLAFKDMVRARRGKRLKGAEKELFSGAFWAGAKALELGLVDGLGDIRSVMRERFGEDVKLKVVGERRGWLRRLRFGATSEVPAGADWA--------GQLVAAVEERL 284          
BLAST of NO03G03670 vs. NCBI_GenBank
Match: WP_108547853.1 (S49 family peptidase [Azospirillum humicireducens] >AWB07573.1 S49 family peptidase (plasmid) [Azospirillum humicireducens])

HSP 1 Score: 240.7 bits (613), Expect = 5.700e-60
Identity = 133/289 (46.02%), Postives = 183/289 (63.32%), Query Frame = 0
Query:   16 KLGPIVNAVHLQGMIAARSGP--RGMSFASLEQHLERAFKGMGVHTPDAVALVVNSPGGSPVQSNLIGQKILALQEKHKVPVWSFAEDVAASGGYWLLAAGQEIYADRASIVGSIGVVSGGFGLHAFLEQHGVERRLHTAGKSKARLDPFLAAKAEDVAHLKETLGEIHEVFKDHIKARRGSKIAGHEDVVFSGDFFTGQKGMELGLVDAIGSLQSVARDKLGEKVKINYINARPRFPLLPGL---GTAMSYVGGGDGSFSLTARLVDDMVGAVEERMEERLWRGRVGL 300
            K GP+V+ + L G+I  + GP   G++ A +   LERAF         AVAL+VNSPGGSPVQS LI ++I  L E+ K+PV++F ED AASGGYWL  A  EI+AD +SIVGSIGVVS GFGLH  +E+HG+ERRL+TAG  K  LDPF   + + VAHLK    +IHE FK  ++ARRG+++ G E+ +FSG F+ G+K + LGL+D +G L+SV R + GEKV++  +          GL   G+A     G   +F+      + +V AV   +++   R R+GL
Sbjct:   17 KAGPLVSVIRLSGVI-GQGGPLQSGLTLAGIAPLLERAF---APKDQKAVALIVNSPGGSPVQSALIAKRIRDLAEEKKLPVFAFCEDAAASGGYWLACAADEIWADESSIVGSIGVVSSGFGLHGLIERHGIERRLYTAGDKKVLLDPFSPEREDGVAHLKALQADIHEAFKAMVRARRGARLTGSEEELFSGAFWAGRKALALGLIDGLGDLRSVLRGRFGEKVRLRLVQQERGMLRRLGLRAGGSAPIPDAGAPEAFA------EALVAAVRTSLDDWAARARLGL 295          
BLAST of NO03G03670 vs. NCBI_GenBank
Match: WP_085083916.1 (S49 family peptidase [Azospirillum oryzae] >SMF32091.1 signal peptide peptidase SppA [Azospirillum oryzae])

HSP 1 Score: 240.4 bits (612), Expect = 7.400e-60
Identity = 128/262 (48.85%), Postives = 172/262 (65.65%), Query Frame = 0
Query:   16 KLGPIVNAVHLQGMIAARSGP--RGMSFASLEQHLERAFKGMGVHTPDAVALVVNSPGGSPVQSNLIGQKILALQEKHKVPVWSFAEDVAASGGYWLLAAGQEIYADRASIVGSIGVVSGGFGLHAFLEQHGVERRLHTAGKSKARLDPFLAAKAEDVAHLKETLGEIHEVFKDHIKARRGSKIAGHEDVVFSGDFFTGQKGMELGLVDAIGSLQSVARDKLGEKVKINYINAR----PRFPLLPGLGTAMSYVGGGDGSFS 272
            K GP+V+ V L G+I  + GP   G+S A +   LERAF         AVAL++NSPGGSPVQS LI ++I  L E+ KVPV++F ED AASGGYWL  A  EI+AD +SIVGSIGVVS GFGLHA +E+HG+ERRL+TAG  K  LDPF   + + VAHLK    ++HE FK  ++ARRG+++ G E+ +FSG F+ G++ + LGL+D +G L+SV R + GEKV++  +        R  L  G G A +   G   +F+
Sbjct:   17 KAGPLVSVVRLTGVI-GQGGPFRSGLSLAGVAPLLERAF---APKYQKAVALIINSPGGSPVQSALIAKRIRDLAEEKKVPVFAFCEDAAASGGYWLACAADEIWADESSIVGSIGVVSSGFGLHALIERHGIERRLYTAGDKKVLLDPFSPEREDGVAHLKALQADVHEAFKAMVRARRGARLTGPEEELFSGAFWAGRRALALGLIDGLGDLRSVMRGRFGEKVRLRVVQQERGMLRRLGLRTGYGNAPALEAGAHEAFA 274          
BLAST of NO03G03670 vs. NCBI_GenBank
Match: WP_042704160.1 (S49 family peptidase [Azospirillum sp. B506])

HSP 1 Score: 239.6 bits (610), Expect = 1.300e-59
Identity = 131/290 (45.17%), Postives = 183/290 (63.10%), Query Frame = 0
Query:   16 KLGPIVNAVHLQGMIAARSGP--RGMSFASLEQHLERAFKGMGVHTPDAVALVVNSPGGSPVQSNLIGQKILALQEKHKVPVWSFAEDVAASGGYWLLAAGQEIYADRASIVGSIGVVSGGFGLHAFLEQHGVERRLHTAGKSKARLDPFLAAKAEDVAHLKETLGEIHEVFKDHIKARRGSKIAGHEDVVFSGDFFTGQKGMELGLVDAIGSLQSVARDKLGEKVKINYI----NARPRFPLLPGLGTAMSYVGGGDGSFSLTARLVDDMVGAVEERMEERLWRGRVGL 300
            K GP+V+ V L G+I  + GP   G++ A +   LERAF         AVAL+VNSPGGSPVQS LI ++I  L E+ K+PV++F ED AASGGYWL  A  EI+AD +SIVGSIGVVS GFGLH  +E+HG+ERRL+TAG  K  LDPF   + + VAHLK    ++HE FK  ++ARRG+++ G E+ +FSG F+ G++ + LGL+D +G ++SV R + GEKV++  +        R  +  G G A +   G   +F+      D +V A    +++   R R+GL
Sbjct:   17 KAGPLVSVVRLTGVI-GQGGPLRSGLTLAGVAPLLERAF---APKDQKAVALIVNSPGGSPVQSALIAKRIRDLAEERKLPVFAFCEDAAASGGYWLACAADEIWADESSIVGSIGVVSSGFGLHGLIERHGIERRLYTAGDKKVLLDPFSPEREDGVAHLKALQADVHEAFKAMVRARRGTRLTGPEEELFSGAFWAGRRALALGLIDGLGDIRSVLRGRFGEKVRLRVVPQDRGMLRRLGMRAGYGDAPALETGTHEAFA------DALVRAARASLDDWAARARLGL 296          
BLAST of NO03G03670 vs. NCBI_GenBank
Match: GAD56368.1 (LOW QUALITY PROTEIN: peptidase, family S49 [Loktanella cinnabarina LL-001])

HSP 1 Score: 239.2 bits (609), Expect = 1.700e-59
Identity = 133/274 (48.54%), Postives = 173/274 (63.14%), Query Frame = 0
Query:   14 FPKLGPIVNAVHLQGMIAARSGPRGMSFASLEQHLERAFKGMGVHTPDAVALVVNSPGGSPVQSNLIGQKILALQEKHKVPVWSFAEDVAASGGYWLLAAGQEIYADRASIVGSIGVVSGGFGLHAFLEQHGVERRLHTAGKSKARLDPFLAAKAEDVAHLKETLGEIHEVFKDHIKARRGSKIAGHEDVVFSGDFFTGQKGMELGLVDAIGSLQSVARDKLGEKVKINYINARPRFPLLPGLGTAMSYVGGGDGSFSLTARLVDDMVGAVEER 288
            F   GP+V+ + LQG I A  G RG+  A +   +ERAFK      P AVA+ +NSPGGSPVQS LI  +I  L E+  VPV +F EDVAASGGYWL +A  EI+ DR SI+GSIGV+S GFG H FLE+HGVERR+HTAGKSK+ LDPF     EDVA L+  LGE+H+ F DH+K+RRG+K+A   D +F+G+ + G + +E GL D IG L  V   + G+K+++       R PLL  +G A                L  + +GA+EER
Sbjct:   17 FRPKGPVVSVIRLQGAIGA--GGRGLDDAGIAAMIERAFKR---GKPAAVAIEINSPGGSPVQSALIAARIRRLSEEKSVPVIAFVEDVAASGGYWLASAADEIFVDRGSIMGSIGVISAGFGAHVFLERHGVERRVHTAGKSKSFLDPFRPQNPEDVARLERWLGEMHDYFIDHVKSRRGAKLADDPD-LFTGEIWIGARAVEKGLADGIGHLVPVLEARFGDKMRLR--RYAKRRPLLSRIGAA----------------LAGETLGAIEER 266          
BLAST of NO03G03670 vs. NCBI_GenBank
Match: WP_045320092.1 (S49 family peptidase [Loktanella cinnabarina])

HSP 1 Score: 239.2 bits (609), Expect = 1.700e-59
Identity = 133/274 (48.54%), Postives = 173/274 (63.14%), Query Frame = 0
Query:   14 FPKLGPIVNAVHLQGMIAARSGPRGMSFASLEQHLERAFKGMGVHTPDAVALVVNSPGGSPVQSNLIGQKILALQEKHKVPVWSFAEDVAASGGYWLLAAGQEIYADRASIVGSIGVVSGGFGLHAFLEQHGVERRLHTAGKSKARLDPFLAAKAEDVAHLKETLGEIHEVFKDHIKARRGSKIAGHEDVVFSGDFFTGQKGMELGLVDAIGSLQSVARDKLGEKVKINYINARPRFPLLPGLGTAMSYVGGGDGSFSLTARLVDDMVGAVEER 288
            F   GP+V+ + LQG I A  G RG+  A +   +ERAFK      P AVA+ +NSPGGSPVQS LI  +I  L E+  VPV +F EDVAASGGYWL +A  EI+ DR SI+GSIGV+S GFG H FLE+HGVERR+HTAGKSK+ LDPF     EDVA L+  LGE+H+ F DH+K+RRG+K+A   D +F+G+ + G + +E GL D IG L  V   + G+K+++       R PLL  +G A                L  + +GA+EER
Sbjct:    6 FRPKGPVVSVIRLQGAIGA--GGRGLDDAGIAAMIERAFKR---GKPAAVAIEINSPGGSPVQSALIAARIRRLSEEKSVPVIAFVEDVAASGGYWLASAADEIFVDRGSIMGSIGVISAGFGAHVFLERHGVERRVHTAGKSKSFLDPFRPQNPEDVARLERWLGEMHDYFIDHVKSRRGAKLADDPD-LFTGEIWIGARAVEKGLADGIGHLVPVLEARFGDKMRLR--RYAKRRPLLSRIGAA----------------LAGETLGAIEER 255          
The following BLAST results are available for this feature:
BLAST of NO03G03670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29816.16.500e-8073.89family s49 [Nannochloropsis gaditana][more]
CBS88623.12.000e-6046.71putative serine protease SohB (plasmid) [Azospiril... [more]
WP_012975804.12.000e-6045.52S49 family peptidase [Azospirillum lipoferum] >BAI... [more]
WP_044551397.12.000e-6046.71S49 family peptidase [Azospirillum lipoferum][more]
PIW27006.13.300e-6049.08S49 family peptidase [Rhodospirillales bacterium C... [more]
WP_108547853.15.700e-6046.02S49 family peptidase [Azospirillum humicireducens]... [more]
WP_085083916.17.400e-6048.85S49 family peptidase [Azospirillum oryzae] >SMF320... [more]
WP_042704160.11.300e-5945.17S49 family peptidase [Azospirillum sp. B506][more]
GAD56368.11.700e-5948.54LOW QUALITY PROTEIN: peptidase, family S49 [Loktan... [more]
WP_045320092.11.700e-5948.54S49 family peptidase [Loktanella cinnabarina][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005528NSK005528Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G03670.1NO03G03670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572703gene_1562Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100017g61gene832Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G03670.1NO03G03670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G03670 ID=NO03G03670|Name=NO03G03670|organism=Nannochloropsis oceanica|type=gene|length=4578bp
CCCTCCACCCCCTCCTTCTCCACTACCACCACAACTCACATTCGCCAGTC
CTGCGAAAGCCCCCGCAAGCCCTCGGACACTTCCTTGACTGACATCAAAA
TTAAAACTTCCCGTACTACATTGAGAGCCCGTCGGAGAAGTCAGTCCACC
CACACTCCCGATGCTCCCACATAAGCCTGTTGCGACATGGACTTTTCTGT
CTACTTCAGCCAGCTTTTGCTTCAGCAATAAAGCGCGCTGGCGGGATGCT
TCTTGGTCGGGGCTCAGGTCGGTGCTACCTGATTTTTTGTGTTCACTGGA
GATCTGACTTAGAGGCGGGAGACGGGAGGAGCAATCCTGCTCCTGTTGTA
GGTGCCCTTGTTGATTCTGAGGGTCGGTATGGCTGTGGCCCCCAGAGGCA
CTGGTGCTGACGCTACTACTGCTGTCGGACGAGGTTGAAGGTTGATGTTC
CCAGTGATGGAGAGGGGGTGATTGAGAGGCTTCACCATCAGCTTCCCCCG
CGCCCTCCGTCCCCCCCTCCCCTTTCTCCACCCCCAAACAACTATCATAA
TCTAAACCCACAGGTGATAGACATGTCGATCGTTGCTGTCTCTCCTTTCC
CCCTGCCTCGCGTTCTTTTAATAATCGGTCCAGCTGCTGCAGCTGTTGCT
GCTGCAAGGAAGACGACGACGGCGGCGGTAGTGTGAACGAAGAGGAAGAG
GTGGAAGAAGGGGGGGAGGAGGACGAGGAGGATACGTTGCGTGGGGAGGG
ACTAGGCATTTTTTCTGGGGTGGAATCACAGCTGGAGGTAGAAGAGTGAC
GACGTACAGCACTGGGGAGACCGCAGCTGGTGGGCGTGGGTTGGATTGGT
GTGTGGGTGACAGGGTCCATTGGGCTGCTACAAAAGGAGGTTGGCCTGCT
GCTGCTGCTGCTACTGCTGTTGCTGCCACTGCTGCTGCTCCCTGTGCTGC
TGGTGCTGCCTATGGTACTGTTGCTGGCGGCGTTGGTGGAGGTGGGAGTC
GGAGGTCGGCCGAGACTTCTGCTAATACTGTTGCCGTTTTTAAGTGTTTT
GCTGCTTGTCTTGCTGGTGCTACTACAGCTGCTATCCAAACTGTTATTGC
CTCCGGTGCTGGCGCTGCTGGCGCTGCTGGCGCTGCTGGGGCTGCTGCTC
CTGCTTCCACCGGCGCTGTCCAAGGAGTTGCGGTCCGTGTCCTTTCCCTT
CCTCCAGGACAGGGTCCTCCGTATCATAGCAGCTGCTGCTACAACTGCTC
TTCCTCCTGTACTGTGGGTTAGTCGTTGTGGGGAAAAGGGAAAATGAGGA
GGACAAACTTGAGATGGCCAAAGCTTGGCTGGTAAGATGTTCCTGGAGAA
ACGGAATTTTAAATGTGCATGGGTCCTTGGCTTTGCTGCAGGTAGCATGG
CTGGGATGTAGGAGGGTGATACATGACGTTAAGGGAAACAATCAGATCTT
GCGAGCGGACGTCGCACAAAAATGGCCGCATGAAGTCAAGATATGGCCAA
ATGATTATGAAAACGTGTATTTCACATGGATGGCGACGTCGGGTTATGTA
TTATACGGTCAGGCGGGGGTAGATCTAACGTCGATGATGCCCGCGTCGGG
CAAAAATGACGGCTGCACGCAGAGGACATCCCAGCTACCGGTTCTGACTG
CGATAAACCGCAGTCGAAGATGTGTCACCTGCAAGGGGGGACAACGCCTC
TGTTAGCATGGTTGGCCGGCTCGCAAGTGCTCAAGCTCTCTTGCATCGAA
GCAGAAGTTGTTCTCACAGCTCTGTGCGTCTTACACGCCTAAGCAACCAC
AAAAGCAACTCAGGTACCCAAATATCTTGCTTGAGGGATCACTGCATCTG
CCACTCATTTCCAGGCCTCGGTGGTGCTCTGTGTGTGTTGTGATGTTCGA
ACATAGTCGGATGGGGACAGGAGCGTGTCGACCGAAAAGGTGAAGCCTCG
CTATCATGTGAAGGGGGCAGAGTAGCGACACGTAAGCAATGAGATCACAT
GTATGGGGCCAACAAAGTTGCCCCTCAGCGGTGGTATATATCCTTGGTCG
AACAAGGAAAAGATAACGACAAGAAGGGCTATAGATCTTGTTATGAGGCA
TTACCTGCTGTCTAGCTGTCCCAGACAGGACCTGTCGATGAGTGACCTTG
GGTGTGTTTCTCGAACCTCTTGCTCGTTTTGCAAGTGCTCTACTCCTGAC
TTTTGTAAAACACTAAAACACTGCACAAGATCTGGTCGGCGCGAGACTTA
AAAAACAGCCAAATATGAATTGCATATCATTGGCTTCCTGCTCGCTTTCG
AAACGGGGCGACTAGGCTGACAGCAAAACAGGAGAAGCAGGAGGCTCCGG
ATGGGAACGTCATGACTGCCTCAATTGCCCTTCTTCCTTGCTTGCCCGGC
TGCGACAGGGTGCTGGGTTTGTACAAGCTAACTTTTAGAAGGGCAGGTGG
AAGCTACGTGGTCATTTTGATGCTTTTCAGGGAGCACCCTTAGTATTTTG
TCCTCAAATGCTTCGGTTTGCTGGGTGGGGTGGTATTGGGACTGACTACC
TCCTGCTTCTGCTAACCCCTCCTGGGCTTACAGAGCCAAGGAAAAGAAGG
CATATTTATGTCGGGCATCGATCTTGTGTATGTTCACTTCGAGCCTAAAT
CTGGCGGTGTCCTACTGCTCTTACGGGTCTGCCCTCTCTTGCTTATCCCT
CTGACACAAACCGCCGAAGACATGCCATGACTTCATTTTGTTGTCATCTT
GATTGATTTATGAACCCACCTTTCTCACACCTCCACGCACAGCTTTGAAG
ACAAGATGGGATTCTCTTGGTTTCAAAAAGCCAAGGGCGCGGTTTTTCCC
AAGCTCGGCCCTATTGTCAATGCCGTCCATTTGCAGGGGATGATTGCTGC
ACGCTCAGGACCCCGTGGCATGTCATTCGCCTCGCTCGAGCAGCATCTAG
gtacgccaaggaagaggggataggggtcatagagccatgtcggtcttgct
ccatgggaggcgacccctctttctttctcttttctatttcttgtttttgg
tcgcttgttcattttcttttccttgttttttttttttcggtttccttgga
aagtatgtcatcgcacagccatatgtgctcaatcaaacacgtatgcgtag
ccctacttacccgccacgccccactccctttctccctctctccctccctc
cgtcctagAGCGCGCATTCAAAGGCATGGGCGTCCACACACCAGATGCCG
TCGCTCTGGTAGTGAACTCTCCCGGTGGCAGCCCTGTGCAGAGTAATCTG
ATCGGACAGAAGATTCTGGCGCTGCAGGAGAAGCACAAAGTGCCCGTCTG
GTCGTTTGCGGAGgtatggaggaggggaggggggcagggagagagggaga
gagagagagatggatgttcttgactccctccatccccctgagcgtttccc
tctcaatttcagtgtggctgccacgtttcgccactggctttccatgggga
ggaaagatctccttaatgatttcacggcttcgttgatgccacttttgaaa
ccgtttttttcaatttatcttttcctccctccctccttccctccgttctt
ccgtgcctccctaagGATGTTGCTGCCAGTGGTGGCTACTGGCTTCTCGC
GGCTGGGCAAGAGATCTACGCCGACAGGGCTAGTATTGTTGGCTCCATTG
GAGTGGTTTCTGGAGGGTTTGGTTTGCATGCATTTTTAGAGCAGCATGGT
GTTGAACGAAGGCTGCACACGGCGGGGAAGTCCAAAGCACGGCTCGATCC
GTTTCTGGCCGCTAAAGCGGAGGATGTGGCCCATTTGAAGGAGACGCTGG
GGGAGATCCATGAGgtaggggcggagagagaaagggattgagggattgta
ggactgagcattaaccgtcgcggggccgtcgaaaacgggccttgatccgt
gtttcttgtcaagtcattagatacggtacgacgtatttgacgatgggcat
gcattttacccacctgtttgccccagtacagGTGTTTAAAGACCATATTA
AGGCCCGGCGGGGCAGCAAGATTGCCGGGCACGAAGACGTGGTGTTTTCT
GGGGATTTTTTCACCGGCCAAAAGGGGATGGAACTCGGGCTGGTCGATGC
CATCGGGAGCTTGCAGTCCGTGGCGAGGGATAAGTTGGGGGAGAAAGTGA
AGATAAATTACATTAATGCTCGGCCAAGGTTCCCTCTCCTTCCAGGGCTG
GGCACGGCTATGAGCTATGTGGGAGGAGGGGACGGTTCGTTTTCGTTGAC
TGCACGGCTGGTGGATGATATGGTGGGGGCAGTGGAGGAGAGGATGGAGG
AGAGGCTGTGGCGAGGTCGGGTCGGTCTGTGAGGATTTTCCACGGATGGG
GGGGAGGGGAGATGGATTAAAATATAGATTGAGAAGGGTGGAGATAGATG
AGGTTTACTGATACGTCCGTGCTGCCCAGATTGTGGAGATGGTGGGGCGG
ACGGTGGATGTGGGATGTGCTACTGTAAAGCAGAAAATTGAAAGGGTGAG
AGGGAAACTAGCAGCATCAGCAGTGGCA
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protein sequence of NO03G03670.1

>NO03G03670.1-protein ID=NO03G03670.1-protein|Name=NO03G03670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=300bp
MGFSWFQKAKGAVFPKLGPIVNAVHLQGMIAARSGPRGMSFASLEQHLER
AFKGMGVHTPDAVALVVNSPGGSPVQSNLIGQKILALQEKHKVPVWSFAE
DVAASGGYWLLAAGQEIYADRASIVGSIGVVSGGFGLHAFLEQHGVERRL
HTAGKSKARLDPFLAAKAEDVAHLKETLGEIHEVFKDHIKARRGSKIAGH
EDVVFSGDFFTGQKGMELGLVDAIGSLQSVARDKLGEKVKINYINARPRF
PLLPGLGTAMSYVGGGDGSFSLTARLVDDMVGAVEERMEERLWRGRVGL*
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Synonyms
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