NO03G03600, NO03G03600 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G03600 vs. NCBI_GenBank
Match: EWM29827.1 (hypothetical protein Naga_100017g67 [Nannochloropsis gaditana]) HSP 1 Score: 231.9 bits (590), Expect = 2.600e-57 Identity = 126/225 (56.00%), Postives = 158/225 (70.22%), Query Frame = 0 Query: 44 LFYGMAGAVGLLTMASLPFLVVPMLKGNALPYMNIPVAKYKNLFDKILPRHIYHGRPKRALPHRFIDLGHGFGEAVVSAAQRGYFAAGVELNPTLYLLSVWNVWRHRLWWPFDTRVRLVCGDMWKRDLRFGEQDVILMFGVQSLMAQLTAKVLAEAKDGALVVLYRFQLTLPASSPSLSPSSPLSLAVAEERVGAECKSGTVSNNTKAEIELLEVSEDEFSVYRV 269 L YG A VGLLT+ SLPFLV+PML+GN +KYK +FD++LPRH+ R + P RFIDLGHG GEAVV+AAQRGY A GVELNPTLYLLS+ NVWRH L WP + RVRLV G+MW++D+ G QDVILMFGVQSLM +L ++ +EA+ ALVVLYRF+L L S +SP A+ E +G ++ +AEI++LEV+ED FSVYR+ Sbjct: 20 LLYGAASVVGLLTLGSLPFLVIPMLRGNXXXXXXXXXSKYKTIFDEVLPRHMPR-RRAGSPPLRFIDLGHGMGEAVVNAAQRGYIATGVELNPTLYLLSICNVWRHGLLWPLEPRVRLVYGNMWRKDMELGRQDVILMFGVQSLMTRLAERLRSEAQHDALVVLYRFKLDL------RSRASPTGAALRE-------ITGRDGSDEQAEIKILEVTEDGFSVYRI 230
BLAST of NO03G03600 vs. NCBI_GenBank
Match: XP_013761216.1 (hypothetical protein AMSG_02195 [Thecamonas trahens ATCC 50062] >KNC56180.1 hypothetical protein AMSG_02195 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 87.8 bits (216), Expect = 6.200e-14 Identity = 54/166 (32.53%), Postives = 84/166 (50.60%), Query Frame = 0 Query: 47 GMAGAVGLLTMASLPFLVVPMLKGNALPYMNIPVAKYKNLFDKILPRHIYHGRPKRALPHRFIDLGHGFGEAVVSAAQRGYFAAGVELNPTLYLLSVWNVWRHRLWWPFDTRVRLVCGDMWKRDLRFGEQDVILMFGVQSLMAQLTAKVLAEAKDGALVVLYRFQL 213 G A G++ + PFL P+ + +PY+ + + + D+I P+ R +DLG G G V++AA+RG A G E+N L L S W WR +W + D+WK DL D I++FGV ++AQ+ +K+ AE D A V+ RF++ Sbjct: 27 GCAAVTGVMAALAAPFL-TPVFRKFTIPYVPAAPTQVRMVLDQI---------PRLDKGARVVDLGSGDGRVVIAAAKRGAMATGYEINYWLVLYSRWRAWREGVW----AQTTFRKADLWKTDL--SGFDAIVVFGVAEMLAQMESKLKAELADNAQVIACRFKM 176
BLAST of NO03G03600 vs. NCBI_GenBank
Match: XP_011433957.1 (PREDICTED: protein FAM173B [Crassostrea gigas] >EKC21534.1 hypothetical protein CGI_10003828 [Crassostrea gigas]) HSP 1 Score: 76.6 bits (187), Expect = 1.400e-10 Identity = 63/209 (30.14%), Postives = 105/209 (50.24%), Query Frame = 0 Query: 20 SLINTAFQAASRDSSTSNSSTSLFLFYG-MAGAVGLLTMASLPFLVVPMLKGNALPYMNIPVAKYKNLFDKILPRHIYHGRPKRALPHRFIDLGHGFGEAVVSAAQRGYFAAGVELNPTLYLLSVWNVWRHRLWWPFDTRVRLVCGDMWKRDLRFGEQDVILMFGVQSLMAQLTAKVLAEAKDGALVVLYRFQLTLPASSPSLSPSSPL 228 S++N +A+S S S S ++ G +AG V + + + PF + P L+ LP++ + +N+F R + +F+DLG G G V AA+R + A GVE+N L L S + +R L ++ D+WK L+ + D I++FGVQ++M +L K++AE K+ VV RF L P++ P + + Sbjct: 3 SIVN---EASSTSSKPKEKSYSGYIITGTLAGVVFGIHLIAGPF-ITPALRRICLPFVPATEEQVENVF-----------RALKGRKGKFVDLGSGDGRLVREAAKRNFTAHGVEMNIWLVLYSKFKTYRQGL----SSKATYSRTDLWKHSLK--QYDNIVIFGVQNMMKELEKKIIAECKEDVRVVACRFPL------PNIEPEAEI 184
BLAST of NO03G03600 vs. NCBI_GenBank
Match: XP_023719658.1 (protein FAM173B [Cryptotermes secundus]) HSP 1 Score: 75.9 bits (185), Expect = 2.400e-10 Identity = 61/173 (35.26%), Postives = 82/173 (47.40%), Query Frame = 0 Query: 38 SSTSLFLFYGMAGAVGLLTMASLPFLVVPMLKGNALPYMNIPVAKYKNLFDKILPRHIYHGRPKRALPHRFIDLGHGFGEAVVSAAQRGYFAAGVELNPTLYLLSVWNVWRHRLWWPFDTRVRLVCGDMWKRDLRFGEQDVILMFGVQSLMAQLTAKVLAEAKDGALVVLYRF 211 S T L L GA L++ LPF V P L+ LPY+ + KN+ + R R IDLG G G V++AA+ G+ A GVELNP L S + +R F R C D+WK +L+ I++FGVQ +M QL K+ E + VV RF Sbjct: 20 SKTGLILISLSGGAAVTLSVICLPF-VSPALRRFCLPYVPATATQIKNVMSALAGR-----------SGRLIDLGSGDGRIVLTAAKAGFVADGVELNPWLVAYSKFQAFR----LGFCNCARFYCQDLWKFNLK--PYPNIVIFGVQEMMPQLEMKLEKELCNDVHVVACRF 174
BLAST of NO03G03600 vs. NCBI_GenBank
Match: XP_023235730.1 (protein FAM173B-like [Centruroides sculpturatus]) HSP 1 Score: 75.1 bits (183), Expect = 4.100e-10 Identity = 67/212 (31.60%), Postives = 98/212 (46.23%), Query Frame = 0 Query: 44 LFYGMAGAVGL-LTMASLPFLVVPMLKGNALPYMNIPVAKYKNLFDKILPRHIYHGRPKRALPHRFIDLGHGFGEAVVSAAQRGYFAAGVELNPTLYLLSVWNVWRHRLWWPFDTRVRLVCGDMWKRDLRFGEQDVILMFGVQSLMAQLTAKVLAEAKDGALVVLYRFQLTLPASSPSLSPSSPLSLAVAEERVGAECKSGTVSNNTKAEIE 255 + G+ G VG +T+ SLPFL P + LP++ + +F + +GR + +DLG G G V+ AA+RG A G+ELNP L L S + + R C D+WK +L + I++FGV S+MAQL K+ E DG+ V+ RF L PS P + V V S S N++ I+ Sbjct: 10 IMVGLTGFVGFGITLVSLPFL-FPAFRRVCLPFLPATKRQLDLVFTHL------NGR-----KGKLVDLGSGDGRIVIEAAKRGLLAEGIELNPWLVLYSRAKALTNGV----SGNTRFKCQDLWKVNL--SPYNNIVIFGVDSMMAQLEEKLAMELVDGSWVIACRFPL------PSWKPITITEAGVDSVWVYERGISDARSTNSQRNID 197
BLAST of NO03G03600 vs. NCBI_GenBank
Match: XP_007260253.2 (protein FAM173B [Astyanax mexicanus]) HSP 1 Score: 73.6 bits (179), Expect = 1.200e-9 Identity = 51/163 (31.29%), Postives = 79/163 (48.47%), Query Frame = 0 Query: 48 MAGAVGLLTMASLPFLVVPMLKGNALPYMNIPVAKYKNLFDKILPRHIYHGRPKRALPHRFIDLGHGFGEAVVSAAQRGYFAAGVELNPTLYLLSVWNVWRHRLWWPFDTRVRLVCGDMWKRDLRFGEQDVILMFGVQSLMAQLTAKVLAEAKDGALVVLYRF 211 + G+V L + PF V P L+ LP++ A+ N+ + R+ +D+G G G V++AA+ G+ A G ELNP L L S + WR + R D+WK + F + +++FGV +M QL AK+ +E + A VV RF Sbjct: 44 VGGSVCALYALAGPF-VAPALRKVCLPFVPATTAQVSNVLSVL-----------RSRSGALVDIGSGDGRIVIAAAKEGFRAVGFELNPWLVLYSRYRAWREGV----HHRTSFYLSDLWK--VSFSQYSNVVIFGVPQMMEQLEAKLQSELQTSAKVVACRF 188
BLAST of NO03G03600 vs. NCBI_GenBank
Match: XP_012945842.1 (PREDICTED: protein FAM173B-like [Aplysia californica]) HSP 1 Score: 73.2 bits (178), Expect = 1.600e-9 Identity = 62/196 (31.63%), Postives = 92/196 (46.94%), Query Frame = 0 Query: 28 AASRDSSTSNSSTSLFLFYGMAGA-VGLLTMASLPFLVVPMLKGNALPYMNIPVAKYKNLFDKILPRHIYHGRPKRALPHRFIDLGHGFGEAVVSAAQRGYFAAGVELNPTLYLLSVWNVWRHRLWWPFDTRVRLVCGDMWKRDLRFGEQDVILMFGVQSLMAQLTAKVLAEAKDGALVVLYRFQLTLPASSPSLS 223 AA + S S + G++GA V +T PF V+P L+ ALPY+ + N+ R R ID+G G G ++AA+RG+ A+GVELN L S W WR + + D+WK DL + +++FGV+++M L K+ E G VV RF LP+ PS++ Sbjct: 37 AAGKHSQPPKLSRRGAVMLGVSGAFVAGVTAVMAPF-VLPGLRRFALPYIPASSEQVSNVL-----------RALRGRTGSLIDIGSGDGRITIAAAERGFQASGVELNRWLVWYSRWVAWRQNV----HSETNFFRRDLWKTDLSCYKN--VVIFGVETMMPDLEEKMTQELVPGTAVVACRF--PLPSWQPSMT 212
BLAST of NO03G03600 vs. NCBI_GenBank
Match: XP_015812796.1 (PREDICTED: protein FAM173B-like [Nothobranchius furzeri]) HSP 1 Score: 72.8 bits (177), Expect = 2.000e-9 Identity = 56/175 (32.00%), Postives = 86/175 (49.14%), Query Frame = 0 Query: 36 SNSSTSLFLFYGMAGAVGLLTMASLPFLVVPMLKGNALPYMNIPVAKYKNLFDKILPRHIYHGRPKRALPHRFIDLGHGFGEAVVSAAQRGYFAAGVELNPTLYLLSVWNVWRHRLWWPFDTRVRLVCGDMWKRDLRFGEQDVILMFGVQSLMAQLTAKVLAEAKDGALVVLYRF 211 S S L + + G++ L + PF V P L+ LP++ A+ +N+ K+L RA +D+G G G V++AA+RG+ A+G ELNP L S +N WR + + D+WK + F + +++FGV +M QL K+ E D A VV RF Sbjct: 23 SRSRLGLIVTGVVGGSLVALYAVATPF-VAPALRKVCLPFVPATTAQVENVL-KVL----------RARSGTLVDIGSGDGRIVIAAAKRGFQASGFELNPWLVWYSRYNAWREGVHRSTSFHI----SDLWKAN--FAQYSNVVIFGVPQMMDQLELKLANELSDTAKVVACRF 179
BLAST of NO03G03600 vs. NCBI_GenBank
Match: XP_020765695.1 (protein FAM173B isoform X3 [Odocoileus virginianus texanus]) HSP 1 Score: 72.4 bits (176), Expect = 2.700e-9 Identity = 49/167 (29.34%), Postives = 76/167 (45.51%), Query Frame = 0 Query: 44 LFYGMAGAVGLLTMASLPFLVVPMLKGNALPYMNIPVAKYKNLFDKILPRHIYHGRPKRALPHRFIDLGHGFGEAVVSAAQRGYFAAGVELNPTLYLLSVWNVWRHRLWWPFDTRVRLVCGDMWKRDLRFGEQDVILMFGVQSLMAQLTAKVLAEAKDGALVVLYRF 211 LF G+ G + A + P L+ LP++ + +N+ + R +D+G G G V++AA+ G+ A G ELNP L S + WR + R D+WK + F + +++FGV +MAQL K+ E KD A V+ RF Sbjct: 49 LFTGIVGGTLVAVYAVATPFITPALRRICLPFVPATTKQIENVVKMLQCRR-----------GPLVDIGSGDGRIVIAAAKEGFTAVGYELNPWLVWYSRYRAWREGV----QASARFYISDLWK--VTFSQYSNVVIFGVPQMMAQLEEKLELELKDDARVIACRF 198
BLAST of NO03G03600 vs. NCBI_GenBank
Match: XP_020765694.1 (protein FAM173B isoform X2 [Odocoileus virginianus texanus]) HSP 1 Score: 72.4 bits (176), Expect = 2.700e-9 Identity = 49/167 (29.34%), Postives = 76/167 (45.51%), Query Frame = 0 Query: 44 LFYGMAGAVGLLTMASLPFLVVPMLKGNALPYMNIPVAKYKNLFDKILPRHIYHGRPKRALPHRFIDLGHGFGEAVVSAAQRGYFAAGVELNPTLYLLSVWNVWRHRLWWPFDTRVRLVCGDMWKRDLRFGEQDVILMFGVQSLMAQLTAKVLAEAKDGALVVLYRF 211 LF G+ G + A + P L+ LP++ + +N+ + R +D+G G G V++AA+ G+ A G ELNP L S + WR + R D+WK + F + +++FGV +MAQL K+ E KD A V+ RF Sbjct: 72 LFTGIVGGTLVAVYAVATPFITPALRRICLPFVPATTKQIENVVKMLQCRR-----------GPLVDIGSGDGRIVIAAAKEGFTAVGYELNPWLVWYSRYRAWREGV----QASARFYISDLWK--VTFSQYSNVVIFGVPQMMAQLEEKLELELKDDARVIACRF 221 The following BLAST results are available for this feature:
BLAST of NO03G03600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G03600 ID=NO03G03600|Name=NO03G03600|organism=Nannochloropsis oceanica|type=gene|length=897bpback to top protein sequence of NO03G03600.1 >NO03G03600.1-protein ID=NO03G03600.1-protein|Name=NO03G03600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=299bpback to top Synonyms
Publications
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