NO03G03560, NO03G03560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G03560 vs. NCBI_GenBank
Match: XP_005856179.1 (guanylate kinase, partial [Nannochloropsis gaditana CCMP526] >EKU20183.1 guanylate kinase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 352.8 bits (904), Expect = 1.400e-93 Identity = 168/210 (80.00%), Postives = 191/210 (90.95%), Query Frame = 0 Query: 187 LDQPVEGLAMRRPLIITGPSGVGKGTLIRRLLGEYPARFGFSCSHTTRGPRPGEQHGIDYFFTTREKLQAEIDEGKFLEHATVHNNLYGTSFDAVREVQDDGKICVLDIDVQGVLSVKKAAAMGLVHDLRPIYVFISPPSLEVLEKRLRGRETEKEEDVLRRLGNARRELEYGCAKGNFDKIVVNGEFDEAYRDLVGYIERMYYGEEGVE 397 LDQPV+ +A+RRPLIITGPSGVGKGTLIRRLLGEYP RFGFSCSHTTRGPRPGE+ G+DYFFTTRE+LQAEIDEGKFLEHATVHNNLYGTSF+A+++VQ++GKIC+LDIDVQGV+SVK A A G +HDLRP+YVFISPPSL VLE RLRGRETEKEEDVLRRL NA+RE+EYG A GNFDK+VVN + D+AY DL YIE MYYG+E V+ Sbjct: 114 LDQPVDRMAVRRPLIITGPSGVGKGTLIRRLLGEYPLRFGFSCSHTTRGPRPGEKEGVDYFFTTRERLQAEIDEGKFLEHATVHNNLYGTSFEAIQKVQEEGKICILDIDVQGVISVKGALARGALHDLRPLYVFISPPSLAVLESRLRGRETEKEEDVLRRLKNAKREVEYGVAPGNFDKVVVNADLDDAYIDLRTYIETMYYGDEEVQ 323
BLAST of NO03G03560 vs. NCBI_GenBank
Match: EWM29804.1 (gualynate kinase-1 [Nannochloropsis gaditana]) HSP 1 Score: 352.8 bits (904), Expect = 1.400e-93 Identity = 168/210 (80.00%), Postives = 191/210 (90.95%), Query Frame = 0 Query: 187 LDQPVEGLAMRRPLIITGPSGVGKGTLIRRLLGEYPARFGFSCSHTTRGPRPGEQHGIDYFFTTREKLQAEIDEGKFLEHATVHNNLYGTSFDAVREVQDDGKICVLDIDVQGVLSVKKAAAMGLVHDLRPIYVFISPPSLEVLEKRLRGRETEKEEDVLRRLGNARRELEYGCAKGNFDKIVVNGEFDEAYRDLVGYIERMYYGEEGVE 397 LDQPV+ +A+RRPLIITGPSGVGKGTLIRRLLGEYP RFGFSCSHTTRGPRPGE+ G+DYFFTTRE+LQAEIDEGKFLEHATVHNNLYGTSF+A+++VQ++GKIC+LDIDVQGV+SVK A A G +HDLRP+YVFISPPSL VLE RLRGRETEKEEDVLRRL NA+RE+EYG A GNFDK+VVN + D+AY DL YIE MYYG+E V+ Sbjct: 122 LDQPVDRMAVRRPLIITGPSGVGKGTLIRRLLGEYPLRFGFSCSHTTRGPRPGEKEGVDYFFTTRERLQAEIDEGKFLEHATVHNNLYGTSFEAIQKVQEEGKICILDIDVQGVISVKGALARGALHDLRPLYVFISPPSLAVLESRLRGRETEKEEDVLRRLKNAKREVEYGVAPGNFDKVVVNADLDDAYIDLRTYIETMYYGDEEVQ 331
BLAST of NO03G03560 vs. NCBI_GenBank
Match: XP_002288328.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93764.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 226.9 bits (577), Expect = 1.100e-55 Identity = 119/214 (55.61%), Postives = 147/214 (68.69%), Query Frame = 0 Query: 176 KGMTSSLSCSSLDQPVEGLAMRRPLIITGPSGVGKGTLIRRLLGEYPARFGFSCSHTTRGPRPGEQHGIDYFFTTREKLQAEIDEGKFLEHATVHNNLYGTSFDAVREVQDDGKICVLDIDVQGVLSVKKAAAMGLVHDLRPIYVFISPPSLEVLEKRLRGRETEKEEDVLRRLGNARRELEYGCAKGNFDKIVVNGEFDEAYRDLVGYIERMY 390 K T S S +S DQP RP++I GPSGVGKGTLI L +YP FGFS SHTTR PR GEQ G+ Y FTT E ++ EIDEGKF+E+A VH N YGTS AV VQ GKIC+LDIDVQGV +VKK+A L IYVF++PPS++ LEKRLRGR TE EE VL+RLGNA+ EL++G +GNFD++ N + D+ + +V + Y Sbjct: 41 KNETKSAS-TSTDQP-------RPVVIAGPSGVGKGTLIELLRKKYPTEFGFSVSHTTRKPREGEQDGVHYNFTTVETIKGEIDEGKFVEYANVHGNYYGTSVQAVESVQKQGKICILDIDVQGVRNVKKSA-------LDAIYVFVAPPSMDELEKRLRGRGTETEEAVLKRLGNAKVELDFGLGEGNFDRVFTNDDLDKTFEAMVEQFKSWY 239
BLAST of NO03G03560 vs. NCBI_GenBank
Match: XP_005854246.1 (guanylate kinase [Nannochloropsis gaditana CCMP526] >EKU22112.1 guanylate kinase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 223.0 bits (567), Expect = 1.600e-54 Identity = 111/184 (60.33%), Postives = 136/184 (73.91%), Query Frame = 0 Query: 198 RPLIITGPSGVGKGTLIRRLLGEYPARFGFSCSHTTRGPRPGEQHGIDYFFTTREKLQAEIDEGKFLEHATVHNNLYGTSFDAVREVQDDGKICVLDIDVQGVLSVKKAAAMGLVHDLRPIYVFISPPSLEVLEKRLRGRETEKEEDVLRRLGNARRELEYGCAKGNFDKIVVNGEFDEAYRDL 382 RPL+I GPSGVGKGTL+ L E+ FGFS SHTTR PRPGE G+ Y FT+R+ ++A I+EG+FLE A VH NLYGTS +AVR+VQ GK+CVLDIDVQGV+ VK+ D+ P YVFI+PPS+E LE RLRGR TE +D+ RLG AR E+EYG AKGNF+ +VVN ++AY DL Sbjct: 146 RPLVICGPSGVGKGTLMNMLFEEFGGYFGFSVSHTTRAPRPGEVEGVHYNFTSRDAMEAAIEEGRFLEFARVHTNLYGTSLEAVRQVQRAGKVCVLDIDVQGVIKVKET-------DVNPHYVFIAPPSVEHLEARLRGRGTESAKDIETRLGAARTEIEYGLAKGNFEHVVVNDTLEKAYADL 322
BLAST of NO03G03560 vs. NCBI_GenBank
Match: EWM28540.1 (gualynate kinase-1 [Nannochloropsis gaditana]) HSP 1 Score: 223.0 bits (567), Expect = 1.600e-54 Identity = 111/184 (60.33%), Postives = 136/184 (73.91%), Query Frame = 0 Query: 198 RPLIITGPSGVGKGTLIRRLLGEYPARFGFSCSHTTRGPRPGEQHGIDYFFTTREKLQAEIDEGKFLEHATVHNNLYGTSFDAVREVQDDGKICVLDIDVQGVLSVKKAAAMGLVHDLRPIYVFISPPSLEVLEKRLRGRETEKEEDVLRRLGNARRELEYGCAKGNFDKIVVNGEFDEAYRDL 382 RPL+I GPSGVGKGTL+ L E+ FGFS SHTTR PRPGE G+ Y FT+R+ ++A I+EG+FLE A VH NLYGTS +AVR+VQ GK+CVLDIDVQGV+ VK+ D+ P YVFI+PPS+E LE RLRGR TE +D+ RLG AR E+EYG AKGNF+ +VVN ++AY DL Sbjct: 146 RPLVICGPSGVGKGTLMNMLFEEFGGYFGFSVSHTTRAPRPGEVEGVHYNFTSRDAMEAAIEEGRFLEFARVHTNLYGTSLEAVRQVQRAGKVCVLDIDVQGVIKVKET-------DVNPHYVFIAPPSVEHLEARLRGRGTESAKDIETRLGAARAEIEYGLAKGNFEHVVVNDTLEKAYADL 322
BLAST of NO03G03560 vs. NCBI_GenBank
Match: AKL71445.1 (Anc-gkdup Bayes1, partial [synthetic construct]) HSP 1 Score: 221.9 bits (564), Expect = 3.700e-54 Identity = 106/188 (56.38%), Postives = 140/188 (74.47%), Query Frame = 0 Query: 198 RPLIITGPSGVGKGTLIRRLLGEYPARFGFSCSHTTRGPRPGEQHGIDYFFTTREKLQAEIDEGKFLEHATVHNNLYGTSFDAVREVQDDGKICVLDIDVQGVLSVKKAAAMGLVHDLRPIYVFISPPSLEVLEKRLRGRETEKEEDVLRRLGNARRELEYGCAKGNFDKIVVNGEFDEAYRDLVGYI 386 RP++++GPSG GK TL+++LL E+P FGFS SHTTR PRPGE +G DY+F TRE+++ I++G+F+EHA NLYGTS AVR+VQ GKIC+LDID+QGV ++KK DL PIY+FI PPS+E LEKRLRGR TE EE + +RL AR E+EYG G+FD I+VN + ++AY +L +I Sbjct: 3 RPVVLSGPSGSGKSTLLKKLLKEFPDEFGFSVSHTTRKPRPGEVNGKDYYFVTREEMEEAIEKGEFIEHAEFSGNLYGTSKKAVRDVQAQGKICILDIDMQGVKNIKKT-------DLNPIYIFIQPPSMEELEKRLRGRGTETEESLQKRLAAAREEMEYGKEPGSFDHIIVNDDLEKAYEELKDFI 183
BLAST of NO03G03560 vs. NCBI_GenBank
Match: CBN75825.1 (Guanylate kinase (IC) [Ectocarpus siliculosus]) HSP 1 Score: 219.9 bits (559), Expect = 1.400e-53 Identity = 115/202 (56.93%), Postives = 143/202 (70.79%), Query Frame = 0 Query: 180 SSLSCSSLDQPVEGLAMRRPLIITGPSGVGKGTLIRRLLGEYPARFGFSCSHTTRGPRPGEQHGIDYFFTTREKLQAEIDEGKFLEHATVHNNLYGTSFDAVREVQDDGKICVLDIDVQGVLSVKKAAAMGLVHDLRPIYVFISPPSLEVLEKRLRGRETEKEEDVLRRLGNARRELEYGCAKGNFDKIVVNGEFDEAYRDL 382 S+++CS+ + A +PL+I GPSGVGKGTLI L ++P RFGFS SHTTR PRPGE G Y+F+ + ++QAEID+ KF+EHA VH NLYGTS AV+ V GKIC+LDIDVQGV SV + A G+ L P Y+FIS PS+EVLE RLRGR TE EE + RRL NA E+EYG NF+K+VVN +EAY +L Sbjct: 49 STVTCSAGNAAGGDAASLKPLVICGPSGVGKGTLINMLREDFPGRFGFSVSHTTRKPRPGEVDGTHYYFSDKREMQAEIDDNKFIEHANVHANLYGTSIAAVQTVTASGKICILDIDVQGVKSV-RGAGRGV---LDPHYLFISAPSMEVLEARLRGRGTETEEALQRRLANANAEMEYGLEADNFEKVVVNDGLEEAYAEL 246
BLAST of NO03G03560 vs. NCBI_GenBank
Match: AJP08514.1 (reconstructed ancestral guanylate kinase, partial [synthetic construct]) HSP 1 Score: 219.5 bits (558), Expect = 1.800e-53 Identity = 104/188 (55.32%), Postives = 139/188 (73.94%), Query Frame = 0 Query: 198 RPLIITGPSGVGKGTLIRRLLGEYPARFGFSCSHTTRGPRPGEQHGIDYFFTTREKLQAEIDEGKFLEHATVHNNLYGTSFDAVREVQDDGKICVLDIDVQGVLSVKKAAAMGLVHDLRPIYVFISPPSLEVLEKRLRGRETEKEEDVLRRLGNARRELEYGCAKGNFDKIVVNGEFDEAYRDLVGYI 386 RP++++GPSG GK TL+++LL E+P FGFS SHTTR PRPGE +G DY+F TRE+++ I++G+F+EHA NLYGTS AV++VQ GKIC+LDID+QGV ++KK DL PIY+FI PPS+E LEKRLRGR TE EE + +RL A+ E+EYG G FD I+VN + ++AY +L +I Sbjct: 3 RPVVLSGPSGSGKSTLLKKLLKEFPDEFGFSVSHTTRKPRPGEVNGKDYYFVTREEMEQAIEKGEFIEHAEFSGNLYGTSKKAVQDVQSQGKICILDIDMQGVKNIKKT-------DLNPIYIFIQPPSMEELEKRLRGRGTETEESLQKRLATAKEEMEYGKEPGAFDHIIVNDDLEKAYEELKDFI 183
BLAST of NO03G03560 vs. NCBI_GenBank
Match: AKL71446.1 (Anc-gkdup Bayes2, partial [synthetic construct]) HSP 1 Score: 218.0 bits (554), Expect = 5.300e-53 Identity = 103/188 (54.79%), Postives = 138/188 (73.40%), Query Frame = 0 Query: 198 RPLIITGPSGVGKGTLIRRLLGEYPARFGFSCSHTTRGPRPGEQHGIDYFFTTREKLQAEIDEGKFLEHATVHNNLYGTSFDAVREVQDDGKICVLDIDVQGVLSVKKAAAMGLVHDLRPIYVFISPPSLEVLEKRLRGRETEKEEDVLRRLGNARRELEYGCAKGNFDKIVVNGEFDEAYRDLVGYI 386 RP++++GPSG GK TL+++LL E+P FGFS SHTTR PRPGE +G DY+F TRE+++ I +G+F+EHA NLYGTS AV++VQ GKIC+LDID+QGV ++KK DL PIY+FI PPS+E LEKRLRGR TE EE + +RL A+ E+EYG G FD I++N + ++AY +L +I Sbjct: 3 RPVVLSGPSGSGKSTLLKKLLKEFPDEFGFSVSHTTRKPRPGEVNGKDYYFVTREEMERAIKKGEFIEHAEFSGNLYGTSKKAVQDVQSQGKICILDIDMQGVKNIKKT-------DLNPIYIFIQPPSMEELEKRLRGRGTETEESLQKRLATAKEEMEYGKKPGAFDHIIINDDLEKAYEELKDFI 183
BLAST of NO03G03560 vs. NCBI_GenBank
Match: XP_002681860.1 (guanylate kinase [Naegleria gruberi] >EFC49116.1 guanylate kinase [Naegleria gruberi]) HSP 1 Score: 216.9 bits (551), Expect = 1.200e-52 Identity = 109/190 (57.37%), Postives = 138/190 (72.63%), Query Frame = 0 Query: 194 LAMRRPLIITGPSGVGKGTLIRRLLGEYPARFGFSCSHTTRGPRPGEQHGIDYFFTTREKLQAEIDEGKFLEHATVHNNLYGTSFDAVREVQDDGKICVLDIDVQGVLSVKKAAAMGLVHDLRPIYVFISPPSLEVLEKRLRGRETEKEEDVLRRLGNARREL-EYGCAKGN-FDKIVVNGEFDEAYRDL 382 L + RP++I GPSGVGKGTLI++L EYP FGFS SHTTRGPRPGE++G+ Y+F+T+E +Q EIDEGKF+EHA VH NLYGTSF AV+EVQ GK CVLDID+QG V+ +L P+ +F+ PPS+++LE+RLRGR TE EE + RL NAR+EL E+ N FD V N + DE+Y L Sbjct: 9 LQLFRPIVICGPSGVGKGTLIQKLFKEYPNIFGFSVSHTTRGPRPGEENGVHYYFSTKEIMQKEIDEGKFIEHANVHGNLYGTSFQAVKEVQTKGKCCVLDIDIQGARQVRNN------KELNPLVLFVKPPSMDILEQRLRGRATETEESIQLRLKNARKELEEFEQDNTNLFDDSVENNDLDESYASL 192 The following BLAST results are available for this feature:
BLAST of NO03G03560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G03560 ID=NO03G03560|Name=NO03G03560|organism=Nannochloropsis oceanica|type=gene|length=1563bpback to top protein sequence of NO03G03560.1 >NO03G03560.1-protein ID=NO03G03560.1-protein|Name=NO03G03560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=400bpback to top Synonyms
Publications
|