NO03G03230, NO03G03230 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO03G03230
Unique Name	NO03G03230
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1396
Alignment location	chr3:958719..960114 +

Link to JBrowse

Properties


Property Name	Value
Description	Mitochondrial carrier family

Mutants

Expression

Analysis:

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr3	genome	chr3:958719..960114 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023395	Mt_carrier_dom
IPR018108	Mitochondrial_sb/sol_carrier

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Homology

[Close]

BLAST of NO03G03230 vs. NCBI_GenBank
Match: EWM29749.1 (mitochondrial carrier family [Nannochloropsis gaditana])

HSP 1 Score: 444.9 bits (1143), Expect = 2.600e-121
Identity = 238/399 (59.65%), Postives = 289/399 (72.43%), Query Frame = 0

Query:    6 PSAFAEATGGAIGALWTTLLFHPLDVAKLRLQAEADXXXXXXXLXXXXXXXXXXXXXRLPXXXXXXXXXXXXXXXXXXXXXPPGDGAMKKGPKTFLGEALVVLKQPDLWYAGLGLKLQLSILSTFVYFYVYSSLKRSFARVFKRPVTFLPNLLLASLAGVVNILITMPLDTIVTRLQVAPRGQRPSFQEMVRLLWEEQQQQRQPASQKQ------------ALLQITRRLSRFWHGLLPALLLTSNPAINYAAYDAMKALIPLPSQRKYHNVKETFLIGILSKFLATILTYPLIRAKVMMMSEGKG--------GIKGGKDEEPEVSLMTLSPSFMLAQERKGLGSILRQLVKQGGLRELYVGLDGQIINTALKNATLLNTKDRVSRITSYIMRHFASF 385
            PSAFAEA GGAIGALWTTLLF+PLDVAKLRLQAEAD                     ++                             KKGP+TFLGE LVVLKQP+LWYAGLGLKLQLS+LSTF+YFYVY++LKR F R FKRPVTFLPNL LAS+AGVVN+L+TMPLDT+VTRLQVAP G+RPS  EM+RL+WEE    R+P  +               ++ + RRL+RFWHG LPALLLTSNPAINYAAYDAMK L+PLP  R++HNV+ETFLIG+LSKFLAT++TYPLIRAKV+MMS+ K         G+    +E+ E   + LSP  +LAQER+GL SIL+QL+++GG+RELYVGLDGQ++NTALKNATLLNTKDR+SR+TS+++R F ++
Sbjct:    8 PSAFAEAMGGAIGALWTTLLFYPLDVAKLRLQAEADSEEEGRKDEEYDVGREKGCTPKVNTDICEDASRLDAPDALTT--------VQKKGPRTFLGEVLVVLKQPELWYAGLGLKLQLSVLSTFIYFYVYTALKRVFTRAFKRPVTFLPNLALASMAGVVNVLLTMPLDTLVTRLQVAPAGRRPSLGEMLRLVWEEDGPDREPVVKPSGHEAGAYGVGMGGVMPVLRRLARFWHGCLPALLLTSNPAINYAAYDAMKTLVPLPQGRRHHNVRETFLIGMLSKFLATLITYPLIRAKVIMMSDTKRAHYLETHFGVNDHSEEDAESIPLGLSPRLLLAQERQGLCSILKQLIREGGVRELYVGLDGQVLNTALKNATLLNTKDRISRVTSFLLRRFFAY 398

[Close]

BLAST of NO03G03230 vs. NCBI_GenBank
Match: CCI48093.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 137.9 bits (346), Expect = 6.700e-29
Identity = 113/378 (29.89%), Postives = 176/378 (46.56%), Query Frame = 0

Query:    7 SAFAEATGGAIGALWTTLLFHPLDVAKLRLQAEADXXXXXXXLXXXXXXXXXXXXXRLPXXXXXXXXXXXXXXXXXXXXXPPGDGAMKKGPKTFLGEALVVLKQPDLWYAGLGLKLQLSILSTFVYFYVYSSLKRSFARVFK--RPVTFLPNLLLASLAGVVNILITMPLDTIVTRLQVAPRGQRPSFQEMVRLLWEEQQQQRQPASQKQALLQITRRLSRFWHGLLPALLLTSNPAINYAAYDAMK--------ALIPLPSQRKYHNVKETFLIGILSKFLATILTYPLIRAKVMMMSEGKGGIKGGKDEEPEVSLMTLSPSFMLAQERKGLGSILRQLVKQGGLRELYVGLDGQIINTALKNATLLNTKDRVSRIT 375
            +AF +A+ GA+GAL   +L +PLDV K R QAE                                                 G    K G K+ L   +   + P   YAGL  K+  +++S F YFY YS LK    + +   + +T   +LL+A+LAG +N+ +T+PL+ I TR Q++ + +     + V  L  E   +                L+ FW G  PAL+LTSNP+INY  +D +K          +    QR      E FL+  +SK +AT++TYP+IRAKV+M SE     K  KDE                Q+++ +   ++ + ++ GLR  Y G   Q++NT LK+A L+ TK++++++T
Sbjct:   10 AAFVDASAGAMGALVAAILLYPLDVVKTRHQAE-----------------------------------------RTYPDSKSGAIVRKNGIKSML-YRIYKEEGPSGLYAGLNSKILHTMISNFAYFYWYSFLKHFTQKRWTKGKQLTTSLSLLVATLAGAINMTMTLPLEVINTRAQLSAKNETKFKSKGVFALGSEIYHE--------------DGLTAFWRGYAPALVLTSNPSINYTIFDTLKDTLQRWKRTALTKHCQRATFTALEAFLLAAISKAIATVVTYPIIRAKVLMQSE-----KHSKDEN-------------TTQKKRTMMQTMKHIYEEQGLRGYYKGCFEQLLNTVLKSAFLIMTKEQIAQVT 313

[Close]

BLAST of NO03G03230 vs. NCBI_GenBank
Match: CCA18786.1 (Mitochondrial Carrier (MC) Family putative [Albugo laibachii Nc14])

HSP 1 Score: 126.7 bits (317), Expect = 1.500e-25
Identity = 110/389 (28.28%), Postives = 172/389 (44.22%), Query Frame = 0

Query:    7 SAFAEATGGAIGALWTTLLFHPLDVAKLRLQAEADXXXXXXXLXXXXXXXXXXXXXRLPXXXXXXXXXXXXXXXXXXXXXPPGDGAMKKGPKTFLGEALVVLKQPDLWYAGLGLKLQLSILSTFVYFYVYSSLKRSFARVFK--RPVTFLPNLLLASLAGVVNILITMPLDTIVTRLQVAPRGQ-RPSFQEMVRLLWEEQQQQRQPASQKQALLQITRRLSRFWHGLLPALLLTSNPAINYAAYDAMK--------ALIPLPSQRKYHNVKETFLIGILSKFLATILTYPLIRAKVMMMSEGKGGIKGGKDEEPEVSLMTLSPSFMLAQERKGLGSILRQLVKQGGLRELYVGLDGQIINTALKNATLLNTKDRVSRITSYIMRHFASF 385
            +AF +A+ GA+GAL   +L +PLD+ K R QA+                                                  +G +    + +  E L  L      YAGL  K+  +++S F YFY YS LK    + +   + +T    LL+A+LAG +N+ +T+PL+ I TR Q++      P  + ++ L  E   +                 L  FW G +PAL+LTSNP+INY  +D +K        + +   SQ+      E FL+  +SK +ATI TYP+IRAKV+M SE +                  S       E+  +   ++++  Q GLR  Y G   Q++NT LK+A L+ TK++++ IT   +     F
Sbjct:   11 AAFVDASAGAMGALVAAILLYPLDIVKTRHQADRTYSESKLQAVSRK------------------------------------NGIVSMLYRIYKEEGLSGL------YAGLNSKILHTMISNFAYFYWYSFLKHLTQKRWMKGKQITTSLRLLIATLAGAINMTMTLPLEVINTRAQLSTENDTSPKTKGILPLSSEIYHED---------------GLMAFWRGYVPALVLTSNPSINYTIFDQLKDTLQRWKQSNMTKHSQQATFTALEAFLLAAISKAIATIATYPIIRAKVLMQSEKQ------------------STHDNTTHEKSTMIQTMKRIYDQQGLRGYYKGCSEQLLNTVLKSAFLIMTKEQIALITMQFLCAIGGF 324

[Close]

BLAST of NO03G03230 vs. NCBI_GenBank
Match: GAY04208.1 (Hypothetical protein PINS_012031 [Pythium insidiosum])

HSP 1 Score: 126.7 bits (317), Expect = 1.500e-25
Identity = 104/401 (25.94%), Postives = 175/401 (43.64%), Query Frame = 0

Query:    8 AFAEATGGAIGALWTTLLFHPLDVAKLRLQAEADXXXXXXXLXXXXXXXXXXXXXRLPXXXXXXXXXXXXXXXXXXXXXPPGDGAMKKGPKTFLGEALVVLKQPDLW---------------YAGLGLKLQLSILSTFVYFYVYSSLKRSFARVFKRPVTFLPNLLLASLAGVVNILITMPLDTIVTRLQVA--------PRGQRPSFQEMVRLLWEEQQQQRQPASQKQALLQITRRLSRFWHGLLPALLLTSNPAINYAAYDAMKALIPLPSQRKYH-------NVKETFLIGILSKFLATILTYPLIRAKVMMMSEGKGGIKGGKDEEPEVSLMTLSPSFMLAQERKGLGSILRQLVKQGGLRELYVGLDGQIINTALKNATLLNTKDRVSRITSYIM 379
            AF +A+ GA+GAL+  +L +PLDV K R Q   D                                                DG     PK          +Q ++W               +AGL  K+  ++ S+F YFY YS LK++  R     ++   NLL+A+LAG +N+ +T+PL+ I TR Q+            Q+P+ +    ++ E               +     +  FW G +P+L+L SNP+INY  +D++K  +    Q++ +        + E F++  ++K +ATI+TYP+IRAKV+M ++ K    G K +  + +      S +          +LR +  + G+   + G   Q+ NT LK+A LL TK+++   T  ++
Sbjct:   14 AFVDASAGAMGALFAAVLLYPLDVVKTRQQVAQD---------------------------------ADRKSGTGADGSKRDDGTRALAPKP---------RQRNMWLLCWAIYRHEGLEGLFAGLSSKMAHTVFSSFAYFYWYSFLKQATERRTGHAISTGANLLVAALAGALNMSMTLPLEMINTRAQITDXXXXXXXXXXQKPAHKSTWAIVQE---------------IYAENGVLSFWKGYVPSLVLVSNPSINYTVFDSLKLRVQQWKQQRTNAKRLVALTMLEAFVLAAVAKAIATIITYPVIRAKVLMQAQKKTVEDGDKSQHHKHARREYGDSMV---------QVLRTIGAREGVAGYFKGCSAQLFNTVLKSALLLMTKEQIYSFTMRVL 348

[Close]

BLAST of NO03G03230 vs. NCBI_GenBank
Match: XP_002900592.1 (Mitochondrial Carrier (MC) Family [Phytophthora infestans T30-4] >EEY59907.1 Mitochondrial Carrier (MC) Family [Phytophthora infestans T30-4])

HSP 1 Score: 125.2 bits (313), Expect = 4.500e-25
Identity = 105/385 (27.27%), Postives = 175/385 (45.45%), Query Frame = 0

Query:    8 AFAEATGGAIGALWTTLLFHPLDVAKLRLQAEADXXXXXXXLXXXXXXXXXXXXXRLPXXXXXXXXXXXXXXXXXXXXXPPGDGAMKKGPKTFLGEALVVLKQPDL--WYAGLGLKLQLSILSTFVYFYVYSSLKRSFARVFKRPVTFLPNLLLASLAGVVNILITMPLDTIVTRLQVAPRGQRPSFQEMVRLLWEEQQQQRQPASQKQ----ALLQITRRLSRFWHGLLPALLLTSNPAINYAAYDAMKALIPLPSQRKYHNVK-------ETFLIGILSKFLATILTYPLIRAKVMMMSEGKGGIKGGKDEEPEVSLMTLSP-SFMLAQERKGLGSILRQLVKQGGLRELYVGLDGQIINTALKNATLLNTKDRVSRITSYIM 379
            AF +A+ GA+GAL+  +L +PLDV K R Q + D                                                    KK     L    ++ +Q  +   +AGL  K+  ++ S F YFY YS LK +  +   +P+T   +LL+AS AG +N+ +T+PL+ I TR Q+ P     S         +E+ +   P S+        +     L+ FW G +P+L+L SNP+INY  +D +K  +        +  +       E F++  ++K +ATI+TYP+IRAKV+M ++ K  I G K           SP     A+    +  +L+++ +  G    + G   Q+ NT LK+A L+ TK+++++ T  ++
Sbjct:   13 AFVDASAGAMGALFAAVLLYPLDVVKTRRQVDVDDSKEEETEEAKNKAIE----------------------------------LRKKKAHNLLAAVWLIYRQEGVEGIFAGLSSKVVHTVSSNFAYFYWYSFLKTAVEKHSSKPITTGMSLLMASTAGALNMSMTLPLEMINTRAQIQPSDDESSDS-------DEKNKDTTPPSRTMWGIAKEIYAEDGLTSFWKGFIPSLVLVSNPSINYTIFDKLKLQLQHSKMVATNATRMSSLTALEAFILAAIAKAVATIITYPVIRAKVLMQAQ-KKHITGQKK----------SPHGHHHAEMGNSMVQVLKRIGELEGPSGYFKGCSAQLFNTVLKSALLVMTKEQITKYTMRVL 345

[Close]

BLAST of NO03G03230 vs. NCBI_GenBank
Match: ETI46152.1 (hypothetical protein F443_09426 [Phytophthora parasitica P1569] >ETK86099.1 hypothetical protein L915_09245 [Phytophthora parasitica] >ETL92651.1 hypothetical protein L917_09083 [Phytophthora parasitica] >ETM45949.1 hypothetical protein L914_09107 [Phytophthora parasitica] >ETO74829.1 hypothetical protein F444_09511 [Phytophthora parasitica P1976])

HSP 1 Score: 124.8 bits (312), Expect = 5.800e-25
Identity = 113/380 (29.74%), Postives = 184/380 (48.42%), Query Frame = 0

Query:    8 AFAEATGGAIGALWTTLLFHPLDVAKLRLQAEADXXXXXXXLXXXXXXXXXXXXXRLPXXXXXXXXXXXXXXXXXXXXXPPGDGAMKKGPKTFLGEALVVLKQ-PDLWYAGLGLKLQLSILSTFVYFYVYSSLKRSFARVFKRPVTFLPNLLLASLAGVVNILITMPLDTIVTRLQVAPRGQRPSFQEMVRLLWEEQQQQRQPASQKQALLQITRRLSRFWHGLLPALLLTSNPAINYAAYDAMKALIPLPSQRKYHNVK--------ETFLIGILSKFLATILTYPLIRAKVMMMSEGKGGIKGGKDEEPEVSLMTLSPSFMLAQERKGLGSILRQLVKQGGLRELYVGLDGQIINTALKNATLLNTKDRVSRITSYIM 379
            AF +A+ GA+GAL+  +L +PLDV K R Q + D                                   XXXXXXXXXX   +   KK     +   L+  K+  +   AGL  K+  ++ S F YFY YS LK +  +    P+T   +LL+AS AG +N+ +T+PL+ I TR Q+ P     S         E Q++     +++   +     L  FW G +P+L+L SNP+INY  +D +K  +   S+    N K        E F++  ++K +ATI+TYP+IRAKV+M ++ K           +++    S     A+    +  +L+++ +  G    + G   Q+ NT LK+A L+ TK+++++ T  ++
Sbjct:   13 AFVDASAGAMGALFAAVLLYPLDVVKTRRQVDVD---------------------------------DSXXXXXXXXXXXXXELRKKKAHNLLVAVWLIYRKEGVEGLLAGLSSKVVHTVSSNFAYFYWYSFLKTAVEKHSSTPITTGMSLLMASTAGALNMSMTLPLEMINTRAQIQPSDDESSDXXXXNKTSEPQRRTMWGIAKE---IYAEDGLMSFWKGFIPSLVLVSNPSINYTIFDKLKLQLQ-HSKMAASNAKRVSSLTALEAFILAAIAKAVATIITYPVIRAKVLMQAQKK-----------QIAGQKSSHGHHHAEMGTSMLQVLKRIGELEGPSGYFKGCSAQLFNTVLKSALLVMTKEQITKYTMRVL 344

[Close]

BLAST of NO03G03230 vs. NCBI_GenBank
Match: ETL39521.1 (hypothetical protein L916_09158 [Phytophthora parasitica] >ETP15962.1 hypothetical protein F441_09386 [Phytophthora parasitica CJ01A1] >ETP44012.1 hypothetical protein F442_09349 [Phytophthora parasitica P10297])

HSP 1 Score: 124.8 bits (312), Expect = 5.800e-25
Identity = 113/380 (29.74%), Postives = 184/380 (48.42%), Query Frame = 0

Query:    8 AFAEATGGAIGALWTTLLFHPLDVAKLRLQAEADXXXXXXXLXXXXXXXXXXXXXRLPXXXXXXXXXXXXXXXXXXXXXPPGDGAMKKGPKTFLGEALVVLKQ-PDLWYAGLGLKLQLSILSTFVYFYVYSSLKRSFARVFKRPVTFLPNLLLASLAGVVNILITMPLDTIVTRLQVAPRGQRPSFQEMVRLLWEEQQQQRQPASQKQALLQITRRLSRFWHGLLPALLLTSNPAINYAAYDAMKALIPLPSQRKYHNVK--------ETFLIGILSKFLATILTYPLIRAKVMMMSEGKGGIKGGKDEEPEVSLMTLSPSFMLAQERKGLGSILRQLVKQGGLRELYVGLDGQIINTALKNATLLNTKDRVSRITSYIM 379
            AF +A+ GA+GAL+  +L +PLDV K R Q + D                                   XXXXXXXXXX   +   KK     +   L+  K+  +   AGL  K+  ++ S F YFY YS LK +  +    P+T   +LL+AS AG +N+ +T+PL+ I TR Q+ P     S         E Q++     +++   +     L  FW G +P+L+L SNP+INY  +D +K  +   S+    N K        E F++  ++K +ATI+TYP+IRAKV+M ++ K           +++    S     A+    +  +L+++ +  G    + G   Q+ NT LK+A L+ TK+++++ T  ++
Sbjct:   13 AFVDASAGAMGALFAAVLLYPLDVVKTRRQVDVD---------------------------------DSXXXXXXXXXXXXXELRKKKAHNLLVAVWLIYRKEGVEGLLAGLSSKVVHTVSSNFAYFYWYSFLKTAVEKHSSMPITTGMSLLMASTAGALNMSMTLPLEMINTRAQIQPSDDESSDXXXXNKTSEPQRRTMWGIAKE---IYAEDGLMSFWKGFIPSLVLVSNPSINYTIFDKLKLQLQ-HSKMAASNAKRVSSLTALEAFILAAIAKAVATIITYPVIRAKVLMQAQKK-----------QIAGQKSSHGHHHAEMGTSMLQVLKRIGELEGPSGYFKGCSAQLFNTVLKSALLVMTKEQITKYTMRVL 344

[Close]

BLAST of NO03G03230 vs. NCBI_GenBank
Match: KUF94674.1 (hypothetical protein AM588_10005645 [Phytophthora nicotianae])

HSP 1 Score: 124.8 bits (312), Expect = 5.800e-25
Identity = 113/380 (29.74%), Postives = 184/380 (48.42%), Query Frame = 0

Query:    8 AFAEATGGAIGALWTTLLFHPLDVAKLRLQAEADXXXXXXXLXXXXXXXXXXXXXRLPXXXXXXXXXXXXXXXXXXXXXPPGDGAMKKGPKTFLGEALVVLKQ-PDLWYAGLGLKLQLSILSTFVYFYVYSSLKRSFARVFKRPVTFLPNLLLASLAGVVNILITMPLDTIVTRLQVAPRGQRPSFQEMVRLLWEEQQQQRQPASQKQALLQITRRLSRFWHGLLPALLLTSNPAINYAAYDAMKALIPLPSQRKYHNVK--------ETFLIGILSKFLATILTYPLIRAKVMMMSEGKGGIKGGKDEEPEVSLMTLSPSFMLAQERKGLGSILRQLVKQGGLRELYVGLDGQIINTALKNATLLNTKDRVSRITSYIM 379
            AF +A+ GA+GAL+  +L +PLDV K R Q + D                                   XXXXXXXXXX   +   KK     +   L+  K+  +   AGL  K+  ++ S F YFY YS LK +  +    P+T   +LL+AS AG +N+ +T+PL+ I TR Q+ P     S         E Q++     +++   +     L  FW G +P+L+L SNP+INY  +D +K  +   S+    N K        E F++  ++K +ATI+TYP+IRAKV+M ++ K           +++    S     A+    +  +L+++ +  G    + G   Q+ NT LK+A L+ TK+++++ T  ++
Sbjct:   13 AFVDASAGAMGALFAAVLLYPLDVVKTRRQVDVD---------------------------------DSXXXXXXXXXXXXXELRKKKAHNLLVAVWLIYRKEGVEGLLAGLSSKVVHTVSSNFAYFYWYSFLKTAVEKHSSTPITTGMSLLMASTAGALNMSMTLPLEMINTRAQIQPSDDESSDXXXXNKTSEPQRRTMWGIAKE---IYAEDGLMSFWKGFIPSLVLVSNPSINYTIFDKLKLQLQ-HSKMAASNAKRVSSLTALEAFILAAIAKAVATIITYPVIRAKVLMQAQKK-----------QIAGQKSSHGHHHAEMGTSMLQVLKRIGELEGPSGYFKGCSAQLFNTVLKSALLVMTKEQITKYTMRVL 344

[Close]

BLAST of NO03G03230 vs. NCBI_GenBank
Match: XP_008906339.1 (hypothetical protein PPTG_12354 [Phytophthora parasitica INRA-310] >ETN08591.1 hypothetical protein PPTG_12354 [Phytophthora parasitica INRA-310])

HSP 1 Score: 124.4 bits (311), Expect = 7.600e-25
Identity = 113/380 (29.74%), Postives = 183/380 (48.16%), Query Frame = 0

Query:    8 AFAEATGGAIGALWTTLLFHPLDVAKLRLQAEADXXXXXXXLXXXXXXXXXXXXXRLPXXXXXXXXXXXXXXXXXXXXXPPGDGAMKKGPKTFLGEALVVLKQ-PDLWYAGLGLKLQLSILSTFVYFYVYSSLKRSFARVFKRPVTFLPNLLLASLAGVVNILITMPLDTIVTRLQVAPRGQRPSFQEMVRLLWEEQQQQRQPASQKQALLQITRRLSRFWHGLLPALLLTSNPAINYAAYDAMKALIPLPSQRKYHNVK--------ETFLIGILSKFLATILTYPLIRAKVMMMSEGKGGIKGGKDEEPEVSLMTLSPSFMLAQERKGLGSILRQLVKQGGLRELYVGLDGQIINTALKNATLLNTKDRVSRITSYIM 379
            AF +A+ GA+GAL+  +L +PLDV K R Q + D                                   XXXXXXXXXX   +   KK     +   L+  K+  +   AGL  K+  ++ S F YFY YS LK +  +    P+T   +LL+AS AG +N+ +T+PL+ I TR Q+ P     S         E Q++      ++   +     L  FW G +P+L+L SNP+INY  +D +K  +   S+    N K        E F++  ++K +ATI+TYP+IRAKV+M ++ K           +++    S     A+    +  +L+++ +  G    + G   Q+ NT LK+A L+ TK+++++ T  ++
Sbjct:   13 AFVDASAGAMGALFAAVLLYPLDVVKTRRQVDVD---------------------------------DSXXXXXXXXXXXXXELRKKKAHNLLVAVWLIYRKEGVEGLLAGLSSKVVHTVSSNFAYFYWYSFLKTAVEKHSSTPITTGMSLLMASTAGALNMSMTLPLEMINTRAQIQPSDDESSDXXXXNKTSEPQRRTMWGIGKE---IYAEDGLMSFWKGFIPSLVLVSNPSINYTIFDKLKLQLQ-HSKMAASNAKRVSSLTALEAFILAAIAKAVATIITYPVIRAKVLMQAQKK-----------QIAGQKSSHGHHHAEMGTSMLQVLKRIGELEGPSGYFKGCSAQLFNTVLKSALLVMTKEQITKYTMRVL 344

[Close]

BLAST of NO03G03230 vs. NCBI_GenBank
Match: KUF90984.1 (Mitochondrial Carrier (MC) Family [Phytophthora nicotianae])

HSP 1 Score: 124.0 bits (310), Expect = 1.000e-24
Identity = 104/380 (27.37%), Postives = 175/380 (46.05%), Query Frame = 0

Query:    8 AFAEATGGAIGALWTTLLFHPLDVAKLRLQAEADXXXXXXXLXXXXXXXXXXXXXRLPXXXXXXXXXXXXXXXXXXXXXPPGDGAMKKGPKTFLGEALVVLKQ-PDLWYAGLGLKLQLSILSTFVYFYVYSSLKRSFARVFKRPVTFLPNLLLASLAGVVNILITMPLDTIVTRLQVAPRGQRPSFQEMVRLLWEEQQQQRQPASQKQALLQITRRLSRFWHGLLPALLLTSNPAINYAAYDAMKALIPLPSQRKYHNVK--------ETFLIGILSKFLATILTYPLIRAKVMMMSEGKGGIKGGKDEEPEVSLMTLSPSFMLAQERKGLGSILRQLVKQGGLRELYVGLDGQIINTALKNATLLNTKDRVSRITSYIM 379
            AF +A+ GA+GAL+  +L +PLDV K R Q + D                                         X      +   KK     +   L+  K+  +   AGL  K+  ++ S F YFY YS LK +  +    P+T   +LL+AS AG +N+ +T+PL+ I TR Q+ P     S         E Q++     +++   +     L  FW G +P+L+L SNP+INY  +D +K  +   S+    N K        E F++  ++K +ATI+TYP+IRAKV+M ++ K           +++    S     A+    +  +L+++ +  G    + G   Q+ NT LK+A L+ TK+++++ T  ++
Sbjct:   13 AFVDASAGAMGALFAAVLLYPLDVVKTRRQVDVD---------------------------------DSKEEETEXAKAKAVELRKKKAHNLLVAVWLIYRKEGVEGLLAGLSSKVVHTVSSNFAYFYWYSFLKTAVEKHSSTPITTGMSLLMASTAGALNMSMTLPLEMINTRAQIQPSDDESSDXXXXNKTSEPQRRTMWGIAKE---IYAEDGLMSFWKGFIPSLVLVSNPSINYTIFDKLKLQLQ-HSKMAASNAKRVSSLTALEAFILAAIAKAVATIITYPVIRAKVLMQAQKK-----------QIAGQKSSHGHHHAEMGTSMLQVLKRIGELEGPSGYFKGCSAQLFNTVLKSALLVMTKEQITKYTMRVL 344

The following BLAST results are available for this feature:

BLAST of NO03G03230 vs. NCBI_GenBank

BLAST of NO03G03230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM29749.1	2.600e-121	59.65	mitochondrial carrier family [Nannochloropsis gadi...	[more]
CCI48093.1	6.700e-29	29.89	unnamed protein product [Albugo candida]	[more]
CCA18786.1	1.500e-25	28.28	Mitochondrial Carrier (MC) Family putative [Albugo...	[more]
GAY04208.1	1.500e-25	25.94	Hypothetical protein PINS_012031 [Pythium insidios...	[more]
XP_002900592.1	4.500e-25	27.27	Mitochondrial Carrier (MC) Family [Phytophthora in...	[more]
ETI46152.1	5.800e-25	29.74	hypothetical protein F443_09426 [Phytophthora para...	[more]
ETL39521.1	5.800e-25	29.74	hypothetical protein L916_09158 [Phytophthora para...	[more]
KUF94674.1	5.800e-25	29.74	hypothetical protein AM588_10005645 [Phytophthora ...	[more]
XP_008906339.1	7.600e-25	29.74	hypothetical protein PPTG_12354 [Phytophthora para...	[more]
KUF90984.1	1.000e-24	27.37	Mitochondrial Carrier (MC) Family [Phytophthora ni...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL068	nonsL068	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR000	ncniR000	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR052	ngnoR052	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK005571	NSK005571	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO03G03230.1	NO03G03230.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|572492	gene_1517	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100022g19	gene871	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO03G03230.1	NO03G03230.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO03G03230 ID=NO03G03230|Name=NO03G03230|organism=Nannochloropsis oceanica|type=gene|length=1396bp
ATGGTGCGCGTTCCTCCCTCTGCCTTTGCCGAGGCCACGGGCGGCGCCAT
TGGTGCGCTATGGACAACGCTGCTGTTTCATCCCCTAGATGTCGCCAAGC
TCCGCCTCCAAGCAGAGGCCGACGCAGAGGAGGATGAGAAAGGGTTGGGG
GGTAGGGAAGAGGACGAGGAGGGCAAGACGGACGAGCGATTGCCCGTGGT
GATGGAGCAAGGCACCAGCACCAGTGCGAGTAGCAGCAGTGCTTCCTCGA
GTTACACGCCTCCTGGTGATGGTGCAATGAAGAAGGGGCCCAAGACCTTT
TTGGGAGAGGCATTGGTGGTGCTCAAGCAACCCGACTTGTGGTACGCGGG
ACTAGgtatgttaaaatgggtaggatggtttagttgggtctcgtgttttg
tttgttggttcaattgactgaatgagatgtagttctctgtgtttcttgac
agtttttatcgtatctccttgcaattgtctttcgcagcgagcaattatcg
ctaagtgtgagagggattgctgactatgctgatactccttcttcctcctc
ccactactcctcctcctcctcctcctttcgctcaatcaatctacagGCTT
GAAACTTCAACTATCCATCCTTTCCACCTTCGTTTACTTCTACGTCTACA
GTTCCCTTAAACGCAGCTTCGCACGCGTATTCAAGCGTCCCGTCACCTTC
CTCCCCAATCTTCTCCTTGCCTCTCTGGCTGGAGTGGTGAACATTTTAAT
CACCATGCCACTGGACACAATAGTCACTCGCCTCCAAGTCGCTCCTCGAG
GGCAACGTCCCTCTTTCCAAGAAATGGTGCGTTTATTATGGGAGGAGCAG
CAGCAACAACGGCAGCCGGCTTCGCAAAAGCAAGCCTTGCTTCAAATTAC
TCGTCGACTCTCCCGCTTCTGGCACGGCCTCCTTCCTGCCCTCCTCCTTA
CATCCAATCCGGCCATTAATTACGCTGCCTACGATGCAATGAAGGCGCTA
ATTCCCCTCCCTTCTCAACGGAAATACCACAACGTCAAAGAAACGTTTTT
AATCGGAATTCTCTCTAAATTCCTTGCCACGATACTTACATATCCTCTCA
TCCGGGCAAAAGTCATGATGATGTCTGAGGGGAAAGGTGGTATAAAGGGA
GGCAAAGATGAAGAGCCTGAAGTCAGCTTGATGACGTTGTCCCCTAGCTT
TATGCTGGCGCAGGAGAGGAAGGGTTTAGGAAGTATTTTGAGACAGTTGG
TGAAGCAGGGAGGGTTGCGGGAGCTCTATGTGGGCTTAGATGGGCAAATT
ATAAATACGGCATTGAAGAATGCGACACTGTTGAATACGAAGGATAGGGT
TAGTCGGATCACGAGCTATATCATGCGGCATTTCGCGTCGTTCTAG

protein sequence of NO03G03230.1

>NO03G03230.1-protein ID=NO03G03230.1-protein|Name=NO03G03230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=385bp
MVRVPPSAFAEATGGAIGALWTTLLFHPLDVAKLRLQAEADAEEDEKGLG
GREEDEEGKTDERLPVVMEQGTSTSASSSSASSSYTPPGDGAMKKGPKTF
LGEALVVLKQPDLWYAGLGLKLQLSILSTFVYFYVYSSLKRSFARVFKRP
VTFLPNLLLASLAGVVNILITMPLDTIVTRLQVAPRGQRPSFQEMVRLLW
EEQQQQRQPASQKQALLQITRRLSRFWHGLLPALLLTSNPAINYAAYDAM
KALIPLPSQRKYHNVKETFLIGILSKFLATILTYPLIRAKVMMMSEGKGG
IKGGKDEEPEVSLMTLSPSFMLAQERKGLGSILRQLVKQGGLRELYVGLD
GQIINTALKNATLLNTKDRVSRITSYIMRHFASF*

Synonyms

Publications