NO03G03200, NO03G03200 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G03200 vs. NCBI_GenBank
Match: EWM29762.1 (atp-dependent protease la [Nannochloropsis gaditana]) HSP 1 Score: 355.1 bits (910), Expect = 4.000e-94 Identity = 202/363 (55.65%), Postives = 247/363 (68.04%), Query Frame = 0 Query: 42 TRTHDGLRLMQTQSTALTLPAILAEAETAWQ-QQEKGIPTVRVLLLHDELDHPE---VTESNVPILGATAERNQLLDKDMMTGIKEDDDREEVTGAKSEAEFPCLLDDPTTATCISVGVRDVEEIVLFRSHDASFPVLRRKGAALGTTD--VSSSLAEMVTQKQPRVLMLFAEPKFPLAELTSRLESIFDKSHVMAAYARAVLPALRSPRILVLGXXXXXXXXXXXXXXXXXXXXIPHAVGFALFGENALSTEDVGRLACSLFGSSWLGNFSLDERLTRHLFVPSNITLGKQPPCCKYQAVEETHAHDLPLFRLHSVLFPGCSLMLKIFEPRYRRMVKQALERNEPFGLLNADASVGTLASIT 399 T L +++TQS L IL EAE AWQ Q T ++L LHDEL+ + ++ P L ATAERNQLLD D+MT + + RE K E + P+TATCISV + +E+VLFR HDASFP LRRKG +D +S+L +MV Q+QP++L+L AEP FPLAEL+SRLE IFDKS+V+AAYARAVLPALR PRIL LG +P A+G A+FG+ LS +D GRLAC L GSSWLGNFSLD+ LTR LFVP + TLG+QPP +Y++V +T A DLPLFRL SVLFPGCSL+LK+FEPRYRRMVKQ LERNEPFGL++A +VGTLASIT Sbjct: 53 TGADTALSIVRTQSGNRKLSEILNEAEKAWQDSQYPSKITFQLLHLHDELEDQDTDGAIQATAPTLIATAERNQLLDTDLMTTERGNPARE-----KEELSW----KHPSTATCISVALPHAQEVVLFRCHDASFPQLRRKGVQGAGSDGADASALQDMVLQRQPQLLLLIAEPNFPLAELSSRLECIFDKSYVLAAYARAVLPALRPPRILALG-GAETPAPGPEGGAEGGDATVPRALGLAVFGDQTLSADDAGRLACCLLGSSWLGNFSLDQALTRQLFVPRHWTLGRQPPTHRYRSVSDTQARDLPLFRLQSVLFPGCSLILKVFEPRYRRMVKQCLERNEPFGLVHARDTVGTLASIT 405
BLAST of NO03G03200 vs. NCBI_GenBank
Match: WP_053151797.1 (ATP-dependent protease [Pseudomonas sp. Pf153]) HSP 1 Score: 72.4 bits (176), Expect = 5.100e-9 Identity = 48/135 (35.56%), Postives = 75/135 (55.56%), Query Frame = 0 Query: 344 LPLFRLHSVLFPGCSLMLKIFEPRYRRMVKQALERNEPFG---LLNAD---------ASVGTLASITEVYRMEEDTGISIIKITGTRRFEVQASHVADDSFGLLRATTAKFFEEDPVEDMEELESLRVQARACLA 467 LPLF L++VLFPGC L L+IFE RY M+ + +++ E FG +LN + A VG A IT+ ++D G+ I++ G RRF V +SHV D L ++ E++P + +++ ++ V LA Sbjct: 3 LPLFPLNTVLFPGCILDLQIFEARYLDMIGRCMKQGEGFGVVCILNGEEVGIAPEGYARVGCEALITDF--SQQDNGLLGIRVQGGRRFIVHSSHVQPDQ---LTVAEVEWLEDEPEQPLQDEDADLVALLKALA 132
BLAST of NO03G03200 vs. NCBI_GenBank
Match: WP_013061736.1 (ATP-dependent protease [Salinibacter ruber] >CBH24313.1 ATP-dependent protease [Salinibacter ruber M8]) HSP 1 Score: 72.0 bits (175), Expect = 6.700e-9 Identity = 46/113 (40.71%), Postives = 58/113 (51.33%), Query Frame = 0 Query: 344 LPLFRLHSVLFPGCSLMLKIFEPRYRRMVKQALERNEPFGLLNAD----ASVGTLASITEVYRMEEDTGISIIKITGTRRFEVQASHVADDSFGLLRATTAKFFEEDPVEDME 453 LPLF L VL+PG L L IFE RYR + LE PFG++ D A VGT A I EV + +D G S I + G RF++ V DD A A +ED D++ Sbjct: 7 LPLFPLSLVLYPGEQLSLHIFEDRYRALTAYCLEHEVPFGIVRTDGESWADVGTTARIEEVVKQYDD-GRSDIVVRGEERFQIDT--VRDDQASYYTADVALIEDEDTTVDLD 116
BLAST of NO03G03200 vs. NCBI_GenBank
Match: WP_011403957.1 (ATP-dependent protease [Salinibacter ruber] >YP_445329.1 ATP-dependent protease La [Salinibacter ruber DSM 13855] >ABC45128.1 ATP-dependent protease La domain protein [Salinibacter ruber DSM 13855]) HSP 1 Score: 72.0 bits (175), Expect = 6.700e-9 Identity = 46/113 (40.71%), Postives = 58/113 (51.33%), Query Frame = 0 Query: 344 LPLFRLHSVLFPGCSLMLKIFEPRYRRMVKQALERNEPFGLLNAD----ASVGTLASITEVYRMEEDTGISIIKITGTRRFEVQASHVADDSFGLLRATTAKFFEEDPVEDME 453 LPLF L VL+PG L L IFE RYR + LE PFG++ D A VGT A I EV + +D G S I + G RF++ V DD A A +ED D++ Sbjct: 7 LPLFPLSLVLYPGEQLTLHIFEDRYRALTAYCLEHEVPFGIVRTDGESWADVGTTARIEEVVKQYDD-GRSDIVVRGEERFQIDT--VRDDQASYYTADVALIEDEDTTVDLD 116
BLAST of NO03G03200 vs. NCBI_GenBank
Match: OLB43620.1 (hypothetical protein AUH05_05840 [Ktedonobacter sp. 13_2_20CM_53_11] >OLB58096.1 hypothetical protein AUI01_03090 [Ktedonobacter sp. 13_2_20CM_2_56_8] >OLE04722.1 hypothetical protein AUG82_05640 [Ktedonobacter sp. 13_1_20CM_4_53_11]) HSP 1 Score: 72.0 bits (175), Expect = 6.700e-9 Identity = 46/124 (37.10%), Postives = 65/124 (52.42%), Query Frame = 0 Query: 341 AHDLPLFRLHSVLFPGCSLMLKIFEPRYRRMVKQALERNEPFG----------LLNADASVGTLASITEVYRMEEDTGISIIKITGTRRFEVQASHVADDSFGLLRATTAKFFE--EDPVEDME 453 A +LPLF L+ VLFPG L L IFEPRYR+M+ E+ PFG LL VGT+A I E+ R+E+ G ++ G +RF + + H L + +E ++P ED+E Sbjct: 5 ASELPLFPLNVVLFPGVVLPLHIFEPRYRQMIADCQEQTTPFGIVLARPESQPLLEEPYPVGTMAEIRELDRLED--GRYVLMAVGVQRFRILSQHREKPYLSAL----VELYEDVDEPAEDVE 122
BLAST of NO03G03200 vs. NCBI_GenBank
Match: OFW01111.1 (hypothetical protein A3H94_07530 [Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20]) HSP 1 Score: 71.6 bits (174), Expect = 8.800e-9 Identity = 52/122 (42.62%), Postives = 65/122 (53.28%), Query Frame = 0 Query: 344 LPLFRLHSVLFPGCSLMLKIFEPRYRRMVKQALERNEPFGLL----NADASVGTLASITEVYRMEEDTGISIIKITGTRRFEVQASHVADDSFGLLRATTAKFFEEDPVEDMEELESLRVQA 462 LPLF L VLFP L L IFE RY+ M+ + LE FG++ AS G ASI EV R ED + I+ + G RRFE+ D LR A+FFE+D ED+ +S R QA Sbjct: 6 LPLFPLKVVLFPATELPLHIFEERYKEMIGECLEHRSEFGIVLVLDEGLASTGCTASIAEVLRKFEDGRMDIL-VRGQRRFELVR---IDQGKSYLRG-EAQFFEDDQ-EDLRREDSRRQQA 121
BLAST of NO03G03200 vs. NCBI_GenBank
Match: WP_012844288.1 (ATP-dependent protease [Rhodothermus marinus] >ACY48677.1 peptidase S16 lon domain protein [Rhodothermus marinus DSM 4252]) HSP 1 Score: 70.9 bits (172), Expect = 1.500e-8 Identity = 41/83 (49.40%), Postives = 53/83 (63.86%), Query Frame = 0 Query: 344 LPLFRLHSVLFPGCSLMLKIFEPRYRRMVKQALERNEPFGLLNADAS----VGTLASITEVYRMEEDTGISIIKITGTRRFEV 423 LPLF L VL+PG L L IFEPRYRR+V + LE + PFG++ A+AS VG+LA IT V D + I+ +TG RF + Sbjct: 6 LPLFPLEVVLYPGEQLPLHIFEPRYRRLVTRCLEEDRPFGIVLAEASKLAQVGSLARITRVLARYGDGRMDIL-VTGEDRFRI 87
BLAST of NO03G03200 vs. NCBI_GenBank
Match: WP_024619114.1 (ATP-dependent protease [Pseudomonas fluorescens]) HSP 1 Score: 70.9 bits (172), Expect = 1.500e-8 Identity = 48/135 (35.56%), Postives = 72/135 (53.33%), Query Frame = 0 Query: 344 LPLFRLHSVLFPGCSLMLKIFEPRYRRMVKQALERNEPFGLL------------NADASVGTLASITEVYRMEEDTGISIIKITGTRRFEVQASHVADDSFGLLRATTAKFFEEDPVEDMEELESLRVQARACLA 467 LPLF L++VLFPGC L L+IFE RY M+ + +++ E FG++ A VG A IT+ ++D G+ I++ G RRF V AS V D L ++ EE+P + ++E ++ V LA Sbjct: 3 LPLFPLNTVLFPGCILDLQIFEARYLDMIGRCMKKGEGFGVVCILDGEEVGIAPEGYARVGCEARITDF--SQQDNGLLGIRVQGGRRFIVHASAVQADQ---LTVAEVEWLEEEPEQPLQEEDADLVALLKALA 132
BLAST of NO03G03200 vs. NCBI_GenBank
Match: WP_006048031.1 (MULTISPECIES: ATP-dependent protease [Burkholderiaceae] >EDT11866.1 peptidase S16 lon domain protein [Paraburkholderia graminis C4D1M] >ALE53589.1 ATP-dependent protease [Burkholderia sp. HB1] >PTQ93302.1 hypothetical protein C8K19_11749 [Paraburkholderia sp. GV072] >PUA99948.1 hypothetical protein C8K18_11749 [Paraburkholderia sp. GV068]) HSP 1 Score: 70.9 bits (172), Expect = 1.500e-8 Identity = 50/126 (39.68%), Postives = 66/126 (52.38%), Query Frame = 0 Query: 343 DLPLFRLHSVLFPGCSLMLKIFEPRYRRMVKQALERNEPFG--LLNADA------------SVGTLASITEVYRMEEDTGISIIKITGTRRFEVQASHVADDSFGLLRATTAKFFEEDPVEDMEEL 455 D+PLF LH+VLFPG L LKIFE RY M + L PFG LL + A S+G LA I E E G+ +I+ GTRRF + + V +S GLL E++P+E ++L Sbjct: 10 DVPLFPLHTVLFPGGILPLKIFEARYLDMARDCLREKTPFGVCLLKSGAEVARENEPSVPESIGCLAEIDEC--DVEAFGMLLIRARGTRRFRLLSHRV--ESSGLLVGMAEPLGEDEPLEGNQQL 131
BLAST of NO03G03200 vs. NCBI_GenBank
Match: WP_025597833.1 (ATP-dependent protease [Burkholderia sp. WSM2230]) HSP 1 Score: 70.5 bits (171), Expect = 2.000e-8 Identity = 46/124 (37.10%), Postives = 67/124 (54.03%), Query Frame = 0 Query: 343 DLPLFRLHSVLFPGCSLMLKIFEPRYRRMVKQALERNEPFG--LLNADASVG---------TLASITEVYRMEEDT-GISIIKITGTRRFEVQASHVADDSFGLLRATTAKFFEEDPVEDMEEL 455 D+PLF LH+VLFP L LKIFE RY M + L PFG LL + A V ++ + E+ + + +T G+ +I+ GTRRF + + V +S GLL E+ P+ED ++L Sbjct: 10 DVPLFPLHTVLFPDGILPLKIFEARYLDMARDCLREKTPFGVCLLKSGAEVARENEPSVPESIGCLAEIDQCDVETFGMLLIRARGTRRFRLLSHRV--ESSGLLVGMAEPLGEDQPLEDNQQL 131 The following BLAST results are available for this feature:
BLAST of NO03G03200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G03200 ID=NO03G03200|Name=NO03G03200|organism=Nannochloropsis oceanica|type=gene|length=2368bpback to top protein sequence of NO03G03200.1 >NO03G03200.1-protein ID=NO03G03200.1-protein|Name=NO03G03200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=574bpback to top Synonyms
Publications
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