NO03G02800, NO03G02800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G02800 vs. NCBI_GenBank
Match: CRG90515.1 (Nuclear cap-binding protein subunit 2 [Talaromyces islandicus]) HSP 1 Score: 176.4 bits (446), Expect = 7.700e-41 Identity = 80/141 (56.74%), Postives = 104/141 (73.76%), Query Frame = 0 Query: 14 YWDRKQFTNFQDQINSLRGTKVVYIGNLSFQTTEPQIHQAFSKVGSIKRVIMGLNRFTKEPCGFCFVEYFEHQCALDAVAFLHGTTLDERIVRVELDWGYHPSRRYGRGESGGQVRDEKRLDYDEGRGGYGRAAMYQSMSD 155 Y DR + F+D ++L+ +Y+GNLSF TTE QIH+ F+K G IKR++MGL+RF K PCGFCFVEY+ HQ ALD + ++ GT LDERI+R +LD G+ R+YGRG+SGGQVRDE R +YD GRGGYGR+ Q M + Sbjct: 27 YNDRDEADKFEDPNDNLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFQKTPCGFCFVEYYTHQDALDCLKYIGGTKLDERIIRTDLDPGFQEGRQYGRGKSGGQVRDEYREEYDPGRGGYGRSLEEQRMRE 167
BLAST of NO03G02800 vs. NCBI_GenBank
Match: XP_020121117.1 (Nuclear cap-binding protein subunit 2 [Talaromyces atroroseus] >OKL60996.1 Nuclear cap-binding protein subunit 2 [Talaromyces atroroseus]) HSP 1 Score: 175.6 bits (444), Expect = 1.300e-40 Identity = 78/135 (57.78%), Postives = 102/135 (75.56%), Query Frame = 0 Query: 16 DRKQFTNFQDQINSLRGTKVVYIGNLSFQTTEPQIHQAFSKVGSIKRVIMGLNRFTKEPCGFCFVEYFEHQCALDAVAFLHGTTLDERIVRVELDWGYHPSRRYGRGESGGQVRDEKRLDYDEGRGGYGRAAMYQ 151 DR++ ++D ++LR +Y+GNLSF TTE QIH+ F+K G IKR++MGL+RF K PCGFCFVEY+ HQ ALD + ++ GT LDERI+R +LD G+ R+YGRG+SGGQVRDE R +YD GRGGYGR+ Q Sbjct: 29 DREEAEKYEDPADNLRNATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFQKTPCGFCFVEYYTHQDALDCLKYIGGTKLDERIIRTDLDPGFQEGRQYGRGKSGGQVRDEYREEYDPGRGGYGRSVAEQ 163
BLAST of NO03G02800 vs. NCBI_GenBank
Match: XP_024702424.1 (small subunit of nuclear cap-binding protein complex [Aspergillus steynii IBT 23096] >PLB47122.1 small subunit of nuclear cap-binding protein complex [Aspergillus steynii IBT 23096]) HSP 1 Score: 175.6 bits (444), Expect = 1.300e-40 Identity = 82/149 (55.03%), Postives = 106/149 (71.14%), Query Frame = 0 Query: 5 LDTDPQPLVYWDRKQFTNFQDQIN-------SLRGTKVVYIGNLSFQTTEPQIHQAFSKVGSIKRVIMGLNRFTKEPCGFCFVEYFEHQCALDAVAFLHGTTLDERIVRVELDWGYHPSRRYGRGESGGQVRDEKRLDYDEGRGGYGRA 147 +D +P Y+ K+ +QD++ LRG +Y+GNLSF TTE QIH+ FSK G +KR++MGL+RF K PCGFCFVEY+ HQ ALD + ++ GT LDERI+R +LD G+ R+YGRG+SGGQVRDE R +YD GRGGYGRA Sbjct: 9 VDRLDRPSAYYVGKKKRRYQDEMEEQEDQNAKLRGATTLYVGNLSFYTTEEQIHELFSKCGEVKRLVMGLDRFNKTPCGFCFVEYYTHQDALDCLKYIGGTKLDERIIRTDLDPGFEEGRQYGRGKSGGQVRDEYREEYDPGRGGYGRA 157
BLAST of NO03G02800 vs. NCBI_GenBank
Match: OQD67325.1 (hypothetical protein PENDEC_c039G06918 [Penicillium decumbens]) HSP 1 Score: 173.3 bits (438), Expect = 6.600e-40 Identity = 78/123 (63.41%), Postives = 97/123 (78.86%), Query Frame = 0 Query: 24 QDQINSLRGTKVVYIGNLSFQTTEPQIHQAFSKVGSIKRVIMGLNRFTKEPCGFCFVEYFEHQCALDAVAFLHGTTLDERIVRVELDWGYHPSRRYGRGESGGQVRDEKRLDYDEGRGGYGRA 147 +D I+ L+G +Y+GNLSF TTE QIH+ FSK G IKR++MGL+RF K PCGFCFVEY+ HQ ALD + ++ GT LDERI+R +LD G+ R+YGRG+SGGQVRDE R +YD GRGGYGRA Sbjct: 39 EDPIDKLQGATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRFNKTPCGFCFVEYYIHQDALDCLKYIGGTKLDERIIRADLDPGFEEGRQYGRGKSGGQVRDEYREEYDPGRGGYGRA 161
BLAST of NO03G02800 vs. NCBI_GenBank
Match: EPS40288.1 (hypothetical protein H072_5905 [Dactylellina haptotyla CBS 200.50]) HSP 1 Score: 172.6 bits (436), Expect = 1.100e-39 Identity = 85/152 (55.92%), Postives = 108/152 (71.05%), Query Frame = 0 Query: 10 QPLVYWDRKQFTN---FQDQINSLRGTKVVYIGNLSFQTTEPQIHQAFSKVGSIKRVIMGLNRFTKEPCGFCFVEYFEHQCALDAVAFLHGTTLDERIVRVELDWGYHPSRRYGRGESGGQVRDEKRLDYDEGRGGYGRAAMYQSMSDPLAE 159 +P Y+D+ N Q + + L+ +Y+GNLSF TTE QIH+ FSK G IKR++MGL+RF K PCGFCFVEY+ H+ ALD + ++ GT LDERIVR +LD G+ R+YGRG+SGGQVRDE R DYD GRGGYGR+ QS S+ AE Sbjct: 13 RPSTYYDKSNKRNREEVQHREDPLKDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRFAKTPCGFCFVEYYTHEDALDCMKYVGGTKLDERIVRTDLDPGFKEGRQYGRGKSGGQVRDEYREDYDAGRGGYGRS--LQSASEMGAE 162
BLAST of NO03G02800 vs. NCBI_GenBank
Match: XP_016641353.1 (hypothetical protein SAPIO_CDS7720 [Scedosporium apiospermum] >KEZ41554.1 hypothetical protein SAPIO_CDS7720 [Scedosporium apiospermum]) HSP 1 Score: 172.2 bits (435), Expect = 1.500e-39 Identity = 79/131 (60.31%), Postives = 98/131 (74.81%), Query Frame = 0 Query: 24 QDQINSLRGTKVVYIGNLSFQTTEPQIHQAFSKVGSIKRVIMGLNRFTKEPCGFCFVEYFEHQCALDAVAFLHGTTLDERIVRVELDWGYHPSRRYGRGESGGQVRDEKRLDYDEGRGGYGRAAMYQSMSD 155 Q + L+ +Y+GNLSF TTE Q+++ FSKVG IKR++MGL+RFTK PCGFCFVEY+ HQ ALD + ++ GT LDERI+R +LD G+ R+YGRG+SGGQVRDE R DYDEGRGG GRA M D Sbjct: 46 QSPEDPLKDAATLYVGNLSFYTTEEQVYELFSKVGEIKRLVMGLDRFTKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERIIRTDLDPGFEEGRQYGRGKSGGQVRDEYREDYDEGRGGLGRALQSDRMRD 176
BLAST of NO03G02800 vs. NCBI_GenBank
Match: XP_002378107.1 (small subunit of nuclear cap-binding protein complex [Aspergillus flavus NRRL3357] >EED52943.1 small subunit of nuclear cap-binding protein complex [Aspergillus flavus NRRL3357] >KOC16124.1 small subunit of nuclear cap-binding protein [Aspergillus flavus AF70] >OOO07218.1 RNP-1 like RNA-binding protein [Aspergillus oryzae]) HSP 1 Score: 171.8 bits (434), Expect = 1.900e-39 Identity = 76/123 (61.79%), Postives = 97/123 (78.86%), Query Frame = 0 Query: 24 QDQINSLRGTKVVYIGNLSFQTTEPQIHQAFSKVGSIKRVIMGLNRFTKEPCGFCFVEYFEHQCALDAVAFLHGTTLDERIVRVELDWGYHPSRRYGRGESGGQVRDEKRLDYDEGRGGYGRA 147 +D ++L+ +Y+GNLSF TTE QIH+ FSK G +KR++MGL+RFTK PCGFCFVEY+ HQ ALD + ++ GT LDERI+R +LD G+ R+YGRG+SGGQVRDE R +YD GRGGYGRA Sbjct: 38 EDPTDNLKNATTLYVGNLSFYTTEEQIHELFSKCGEVKRLVMGLDRFTKTPCGFCFVEYYTHQDALDCLKYVGGTKLDERIIRTDLDPGFEEGRQYGRGKSGGQVRDEYREEYDPGRGGYGRA 160
BLAST of NO03G02800 vs. NCBI_GenBank
Match: XP_016612852.1 (hypothetical protein SPPG_00516 [Spizellomyces punctatus DAOM BR117] >KND04813.1 hypothetical protein SPPG_00516 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 171.8 bits (434), Expect = 1.900e-39 Identity = 81/144 (56.25%), Postives = 100/144 (69.44%), Query Frame = 0 Query: 1 MAELLDTDPQPLVYWDRKQFTNFQDQINSLRGTKVVYIGNLSFQTTEPQIHQAFSKVGSIKRVIMGLNRFTKEPCGFCFVEYFEHQCALDAVAFLHGTTLDERIVRVELDWGYHPSRRYGRGESGGQVRDEKRLDYDEGRGGYG 145 M L+ + +P VY D K D + + +YIGNLSF TTE QI++ FSK G IKR+IMGL+RF K PCGFCFVEY+ Q A+D + F++GT LDERI+R +LD GY R +GRG SGGQVRDE R DYDEGRGG+G Sbjct: 1 MTSLVTSLGKPSVYKDNKYLGTDDDWEREIAASSTLYIGNLSFYTTEEQIYELFSKCGEIKRIIMGLDRFKKTPCGFCFVEYYNRQDAMDCMKFINGTKLDERIIRTDLDPGYKEGRNFGRGRSGGQVRDEHREDYDEGRGGWG 144
BLAST of NO03G02800 vs. NCBI_GenBank
Match: OQE20299.1 (hypothetical protein PENSTE_c013G01769 [Penicillium steckii]) HSP 1 Score: 171.8 bits (434), Expect = 1.900e-39 Identity = 76/122 (62.30%), Postives = 96/122 (78.69%), Query Frame = 0 Query: 25 DQINSLRGTKVVYIGNLSFQTTEPQIHQAFSKVGSIKRVIMGLNRFTKEPCGFCFVEYFEHQCALDAVAFLHGTTLDERIVRVELDWGYHPSRRYGRGESGGQVRDEKRLDYDEGRGGYGRA 147 + +N L+G +Y+GNLSF TTE QIH+ F+K G IKR++MGL+RF K PCGFCFVEY+ HQ ALD + ++ GT LDERI+R +LD G+ R+YGRG+SGGQVRDE R +YD GRGGYGRA Sbjct: 37 EPVNKLQGATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFNKTPCGFCFVEYYTHQDALDCLKYVGGTKLDERIIRADLDPGFEEGRQYGRGKSGGQVRDEYREEYDPGRGGYGRA 158
BLAST of NO03G02800 vs. NCBI_GenBank
Match: PIG80837.1 (nuclear cap-binding protein subunit 2 [Aspergillus arachidicola]) HSP 1 Score: 171.8 bits (434), Expect = 1.900e-39 Identity = 76/123 (61.79%), Postives = 97/123 (78.86%), Query Frame = 0 Query: 24 QDQINSLRGTKVVYIGNLSFQTTEPQIHQAFSKVGSIKRVIMGLNRFTKEPCGFCFVEYFEHQCALDAVAFLHGTTLDERIVRVELDWGYHPSRRYGRGESGGQVRDEKRLDYDEGRGGYGRA 147 +D ++L+ +Y+GNLSF TTE QIH+ FSK G +KR++MGL+RFTK PCGFCFVEY+ HQ ALD + ++ GT LDERI+R +LD G+ R+YGRG+SGGQVRDE R +YD GRGGYGRA Sbjct: 38 EDPTDNLKNATTLYVGNLSFYTTEEQIHELFSKCGEVKRLVMGLDRFTKTPCGFCFVEYYTHQDALDCLKYVGGTKLDERIIRTDLDPGFEEGRQYGRGKSGGQVRDEYREEYDPGRGGYGRA 160 The following BLAST results are available for this feature:
BLAST of NO03G02800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G02800 ID=NO03G02800|Name=NO03G02800|organism=Nannochloropsis oceanica|type=gene|length=1190bpback to top protein sequence of NO03G02800.1 >NO03G02800.1-protein ID=NO03G02800.1-protein|Name=NO03G02800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=178bpback to top protein sequence of NO03G02800.2 >NO03G02800.2-protein ID=NO03G02800.2-protein|Name=NO03G02800.2|organism=Nannochloropsis oceanica|type=polypeptide|length=176bpback to top Synonyms
Publications
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