NO03G02680, NO03G02680 (gene) Nannochloropsis oceanica

Overview
NameNO03G02680
Unique NameNO03G02680
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1697
Alignment locationchr3:764947..766643 -

Link to JBrowse

Properties
Property NameValue
DescriptionMitochondrial protein translocase family
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:764947..766643 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008320protein transmembrane transporter activity
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0030150protein import into mitochondrial matrix
GO:0055085transmembrane transport
GO:0016043cellular component organization
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0005741mitochondrial outer membrane
GO:0016020membrane
GO:0005739mitochondrion
Vocabulary: INTERPRO
TermDefinition
IPR037930Tom40
IPR027246Porin_Euk/Tom40
Homology
BLAST of NO03G02680 vs. NCBI_GenBank
Match: EWM29712.1 (mitochondrial protein translocase family [Nannochloropsis gaditana])

HSP 1 Score: 540.0 bits (1390), Expect = 5.300e-150
Identity = 274/356 (76.97%), Postives = 301/356 (84.55%), Query Frame = 0
Query:    1 MSFLRAGRRGLLSFGS-----VPVVGLAVAXXXXXXXXXXXXXXXXXXXXXXXXXXISVEMPELVKQAAEERRRQSQLKNPGSFEKIIEEGKRLSSVDCFEGFRLEIQKMVTPHFYMAHSFMLGVKLPHVDTSALYDFSTHVVLPGNQLLMARLGHGGSMDGRIHFGLGDKTLVKMIASLQPNPAKDTFQMDAEHHGTDHSLTFRMTKGPQVYASYLQSITPSLALGGDTLFDFSEGGGVFSFGGKYTGGDWTGVAMLAQYGQICLVQYIKHVSPGRMALVADLVVNPLTLDSQTVLGAEVNMKQSRFVTTVDNGGKISALLESRVVPNAVTLLLSGEVDQAKDEYKFGYGFQLNL 352
            MSF RAG+R   SFG+       +VGLAV                            S+E+P LVKQA EERR+ +QLKNPGSFEK+IE+GKRLSSVD FEGFRLE+QKMVTPHFY+AHSFMLGVKLP VDT+ALYDFSTHVVLPGNQL+MAR+GH GSMDGRIHFGLG+ TLVK+IASLQPN AKDT+Q+DAE HG DHSLTFR++KGPQ+YASYLQSITP LALGGDTLFDF+EGGGVFS GGKYTG DW GVAMLAQYGQICL+QYIKHVSPGRMALVADLV+NPLTLDSQTVLGAEVNMKQSRF+TTVDNGGKI+ALLE+RVVPNAVTLLLSGEVD  KDEYKFGYGFQLNL
Sbjct:    1 MSFFRAGKRCAASFGARALPPTMIVGLAVT-AEYYNQGLQNYSTTLCDAAVVNNEDTSIEVPALVKQAEEERRKVAQLKNPGSFEKLIEDGKRLSSVDSFEGFRLEVQKMVTPHFYLAHSFMLGVKLPQVDTNALYDFSTHVVLPGNQLIMARMGHAGSMDGRIHFGLGENTLVKVIASLQPNAAKDTYQVDAERHGRDHSLTFRLSKGPQLYASYLQSITPGLALGGDTLFDFAEGGGVFSLGGKYTGPDWVGVAMLAQYGQICLLQYIKHVSPGRMALVADLVLNPLTLDSQTVLGAEVNMKQSRFLTTVDNGGKIAALLEARVVPNAVTLLLSGEVDGVKDEYKFGYGFQLNL 355          
BLAST of NO03G02680 vs. NCBI_GenBank
Match: GAY00447.1 (Hypothetical protein PINS_008312 [Pythium insidiosum])

HSP 1 Score: 159.5 bits (402), Expect = 2.000e-35
Identity = 93/299 (31.10%), Postives = 164/299 (54.85%), Query Frame = 0
Query:   55 EMPELVKQAAEERRRQSQLKNPGSFEKIIEEGKRLSSVDCFEGFRLEIQKMVTPHFYMAHSFMLGVKLPHVDTSALYDFSTHVV----LPGNQLLMARLGHGGSMDGRIHFGLGDKTLVKMIASLQPNPAKDTFQMDAEHHGTDHSLTFRMTKGPQVYASYLQSITPSLALGGDTLFDFSEGGGVFSFGGKYTGGDWTGVAMLAQYGQICLVQYIKHVSPGRMALVADLVVNPLTLDSQTVLGAEVNMKQSRFVTTVDNGGKISALLESRVVPNAVTLLLSGEVDQAKDEYKFGYGFQL 350
            E+P  ++Q  E  R +++L NPG +E    E K   S D F+GFR +  +++   F  +HSF+LG  +       LY F  +VV    +  +  LM+++   G +D R +  L  +  +++ + L+          D ++ G D +   +++ GP +  +Y QS+T  LALGG+  +       + ++  KY+  DW G A +   G + L QY++ V   RM   +++V N ++ +SQ+ +G EV++ Q+  VT++D  G+++  +E+RV+PN + L LS E   AKD++KFGYG Q+
Sbjct:   29 ELPVFMQQVEEIERERARLPNPGLYENATNELKGPVSPDAFDGFRFDFTRILGQRFSTSHSFLLGTPM---IPGGLYQFGANVVMGDAMDPSTFLMSKITPDGYLDARWNQRLSQRWKMRVKSQLKAEEDGSQVLADFDYTGDDFTWNMKLSNGPLLGLTYFQSVTQHLALGGEGYYHGQHRKVIAAYTAKYSTPDWVGAATMGAMGTLQL-QYVRKVG-NRMRYGSEMVYNHMSGESQSTVGVEVDLNQTHIVTSLDQTGRVATSVETRVLPNFM-LTLSAEAYPAKDDFKFGYGAQI 321          
BLAST of NO03G02680 vs. NCBI_GenBank
Match: GAX98165.1 (Hypothetical protein PINS_006006 [Pythium insidiosum])

HSP 1 Score: 159.5 bits (402), Expect = 2.000e-35
Identity = 93/299 (31.10%), Postives = 164/299 (54.85%), Query Frame = 0
Query:   55 EMPELVKQAAEERRRQSQLKNPGSFEKIIEEGKRLSSVDCFEGFRLEIQKMVTPHFYMAHSFMLGVKLPHVDTSALYDFSTHVV----LPGNQLLMARLGHGGSMDGRIHFGLGDKTLVKMIASLQPNPAKDTFQMDAEHHGTDHSLTFRMTKGPQVYASYLQSITPSLALGGDTLFDFSEGGGVFSFGGKYTGGDWTGVAMLAQYGQICLVQYIKHVSPGRMALVADLVVNPLTLDSQTVLGAEVNMKQSRFVTTVDNGGKISALLESRVVPNAVTLLLSGEVDQAKDEYKFGYGFQL 350
            E+P  ++Q  E  R +++L NPG +E    E K   S D F+GFR +  +++   F  +HSF+LG  +       LY F  +VV    +  +  LM+++   G +D R +  L  +  +++ + L+          D ++ G D +   +++ GP +  +Y QS+T  LALGG+  +       + ++  KY+  DW G A +   G + L QY++ V   RM   +++V N ++ +SQ+ +G EV++ Q+  VT++D  G+++  +E+RV+PN + L LS E   AKD++KFGYG Q+
Sbjct:   29 ELPVFMQQVEEIERERARLPNPGLYENATNELKGPVSPDAFDGFRFDFTRILGQRFSTSHSFLLGTPM---IPGGLYQFGANVVMGDAMDPSTFLMSKITPDGYLDARWNQRLSQRWKMRVKSQLKAEEDGSQVLADFDYTGDDFTWNMKLSNGPLLGLTYFQSVTQHLALGGEGYYHGQHRKVIAAYTAKYSTPDWVGAATMGAMGTLQL-QYVRKVG-NRMRYGSEMVYNHMSGESQSTVGVEVDLNQTHIVTSLDQTGRVATSVETRVLPNFM-LTLSAEAYPAKDDFKFGYGAQI 321          
BLAST of NO03G02680 vs. NCBI_GenBank
Match: XP_002899904.1 (Mitochondrial Protein Translocase (MPT) Family [Phytophthora infestans T30-4] >EEY60531.1 Mitochondrial Protein Translocase (MPT) Family [Phytophthora infestans T30-4])

HSP 1 Score: 154.1 bits (388), Expect = 8.200e-34
Identity = 95/300 (31.67%), Postives = 165/300 (55.00%), Query Frame = 0
Query:   55 EMPELVKQAAEERRRQSQLKNPGSFEKIIEEGKRLSSVDCFEGFRLEIQKMVTPHFYMAHSFMLGVKLPHVDTSALYDFSTHVV----LPGNQLLMARLGHGGSMDGRIHFGLGDKTLVKMIASLQPNPAKDTFQMDAEHHGTDHSLTFRMTKGPQVYASYLQSITPSLALGGDTLFDFSEGGGVFSFGGKYTGGDWTGVAMLAQYGQICLVQYIKHVSPGRMALVADLVVNPLTLDSQTVLGAEVNMKQSRFVTTVDNGGKISALLESRVVPNAVTLLLSGEVDQAKDEYKFGYGFQLN 351
            ++P  ++Q  +  + +++L NPG +E    E K   S D F+GFR +  +++      +HSF+LG  +       LY F  +VV    +  +  LM+++   G +D R +  L D   +++ A L+          D ++ G D +   +++ GP +  SYLQS+T +LALGG+  +       + ++ GK+T  DW G+A     G + L  Y++ V   R+   ++LV N  + ++QT  G E+++ Q+RFV++VD+  +++  +ESRV+PN V L LS E    KD++KFGYG QL+
Sbjct:   28 DLPVFMQQVEDIEKERAKLPNPGLYESAPNELKGPVSPDAFDGFRFDFTRILGQTCSTSHSFLLGTPM---IPGGLYQFGANVVMGDPMDPSTFLMSKITPDGYLDARWNQKLSDNWKMRVKAQLKNEEHGSQALADFDYTGEDFTWNMKVSNGPLLGVSYLQSVTQNLALGGEAYYHGKHRKVISAYAGKWTDRDWVGMATYGAMGTLQLA-YLRKVG-HRIRYGSELVYNHASGEAQTTCGVEMDLGQTRFVSSVDSTFRVATSIESRVLPNFV-LTLSAEGFPLKDDFKFGYGAQLS 321          
BLAST of NO03G02680 vs. NCBI_GenBank
Match: ETI36808.1 (hypothetical protein F443_17149 [Phytophthora parasitica P1569] >ETK77017.1 hypothetical protein L915_16690 [Phytophthora parasitica] >ETL30432.1 hypothetical protein L916_16597 [Phytophthora parasitica] >ETL83686.1 hypothetical protein L917_16418 [Phytophthora parasitica] >ETM36880.1 hypothetical protein L914_16525 [Phytophthora parasitica] >ETO65528.1 hypothetical protein F444_17191 [Phytophthora parasitica P1976] >ETP06631.1 hypothetical protein F441_17023 [Phytophthora parasitica CJ01A1] >ETP34715.1 hypothetical protein F442_17024 [Phytophthora parasitica P10297] >KUF66355.1 Mitochondrial Protein Translocase (MPT) Family [Phytophthora nicotianae] >KUF83587.1 Mitochondrial Protein Translocase (MPT) Family [Phytophthora nicotianae])

HSP 1 Score: 153.7 bits (387), Expect = 1.100e-33
Identity = 95/300 (31.67%), Postives = 165/300 (55.00%), Query Frame = 0
Query:   55 EMPELVKQAAEERRRQSQLKNPGSFEKIIEEGKRLSSVDCFEGFRLEIQKMVTPHFYMAHSFMLGVKLPHVDTSALYDFSTHVV----LPGNQLLMARLGHGGSMDGRIHFGLGDKTLVKMIASLQPNPAKDTFQMDAEHHGTDHSLTFRMTKGPQVYASYLQSITPSLALGGDTLFDFSEGGGVFSFGGKYTGGDWTGVAMLAQYGQICLVQYIKHVSPGRMALVADLVVNPLTLDSQTVLGAEVNMKQSRFVTTVDNGGKISALLESRVVPNAVTLLLSGEVDQAKDEYKFGYGFQLN 351
            ++P  ++Q  +  + +++L NPG +E    E K   S D F+GFR +  +++      +HSF+LG  +       LY F  +VV    +  +  LM+++   G +D R +  L D   +++ A L+          D ++ G D +   +++ GP +  SYLQS+T +LALGG+  +       + ++ GK+T  DW G+A     G + L  Y++ V   R+   ++LV N  + ++QT  G E+++ Q+RFV++VD+  +++  +ESRV+PN V L LS E    KD++KFGYG QL+
Sbjct:   28 DLPVFMQQVEQIEKERAKLPNPGLYESAPNELKGPVSPDAFDGFRFDFTRILGQTCSTSHSFLLGTPM---IPGGLYQFGANVVMGDPMDPSTFLMSKITPDGYLDARWNQKLSDNWKMRVKAQLKNEEHGSQALADFDYTGEDFTWNMKVSNGPLLGVSYLQSVTQNLALGGEAYYHGKHRKVISAYAGKWTDRDWVGMATYGAMGTLQLA-YLRKVG-HRIRYGSELVYNHSSGEAQTTCGVEMDLGQTRFVSSVDSTFRVATSIESRVLPNFV-LTLSAEGFPLKDDFKFGYGAQLS 321          
BLAST of NO03G02680 vs. NCBI_GenBank
Match: XP_012206052.1 (hypothetical protein SPRG_11194 [Saprolegnia parasitica CBS 223.65] >KDO23264.1 hypothetical protein SPRG_11194 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 152.9 bits (385), Expect = 1.800e-33
Identity = 96/293 (32.76%), Postives = 152/293 (51.88%), Query Frame = 0
Query:   59 LVKQAAEERRRQSQLKNPGSFEKIIEEGKRLSSVDCFEGFRLEIQKMVTPHFYMAHSFMLGVKLPHVDTSALYDFSTHVVL---PGNQLLMARLGHGGSMDGRIHFGLGDKTLVKMIASLQPNPAKDTFQMDAEHHGTDHSLTFRMTKGPQVYASYLQSITPSLALGGDTLFDFSEGGGVFSFGGKYTGGDWTGVAMLAQYGQICLVQYIKHVSPGRMALVADLVVNPLTLDSQTVLGAEVNMKQSRFVTTVDNGGKISALLESRVVPNAVTLLLSGEVDQAKDEYKFGYGFQ 349
            LV       +    L NPG+FE ++ E K +     FEGFR + Q+ + P F + H+ +LG   P +    +Y F    V+   P   LL  ++ H GS+D R H  L D   ++  A L+         +D +    D S   ++  G  +  +YLQS+T   A+GG+  +       + S+  KYT   WTG+A     G + L  Y++ VS  R+ L  +LV N  + ++ + LG EV+++Q+RFV+++D+  K++  LE +V+P  + LLLS E   A D+ KFGYGFQ
Sbjct:   39 LVAAVEAIEKAHKSLPNPGTFENVLGEVKSVLMPGTFEGFRFDFQRNLGPRFAVNHALLLG--CPQI-PGGVYQFGATTVVGDGPEPMLLRGQVSHDGSVDARWHARLSDHFKMRAQAQLKQEAHASQAMVDIDFSAADCSANLKVGNGLLLGVNYLQSVTKEWAIGGEGYYYGKHRKTIASYVAKYTDAKWTGIASYGSQGTLQL-HYLRKVS-DRVRLATELVYNAPSGEAASTLGVEVDLRQTRFVSSIDHTFKLATSLECKVLPQ-LQLLLSAEGTPAADDLKFGYGFQ 325          
BLAST of NO03G02680 vs. NCBI_GenBank
Match: XP_008912495.1 (hypothetical protein PPTG_16761 [Phytophthora parasitica INRA-310] >ETN02112.1 hypothetical protein PPTG_16761 [Phytophthora parasitica INRA-310])

HSP 1 Score: 152.5 bits (384), Expect = 2.400e-33
Identity = 95/300 (31.67%), Postives = 164/300 (54.67%), Query Frame = 0
Query:   55 EMPELVKQAAEERRRQSQLKNPGSFEKIIEEGKRLSSVDCFEGFRLEIQKMVTPHFYMAHSFMLGVKLPHVDTSALYDFSTHVV----LPGNQLLMARLGHGGSMDGRIHFGLGDKTLVKMIASLQPNPAKDTFQMDAEHHGTDHSLTFRMTKGPQVYASYLQSITPSLALGGDTLFDFSEGGGVFSFGGKYTGGDWTGVAMLAQYGQICLVQYIKHVSPGRMALVADLVVNPLTLDSQTVLGAEVNMKQSRFVTTVDNGGKISALLESRVVPNAVTLLLSGEVDQAKDEYKFGYGFQLN 351
            ++P  ++Q  +  + +++L NPG +E    E K   S D F+GFR +  +++      +HSF+LG  +       LY F  +VV    +  +  LM+++   G +D R +  L D   +++ A L+          D ++ G D +   +++ GP +  SYLQS+T +LALGG+  +       + ++ GK+T  DW G+A     G + L  Y++ V   R+   ++LV N  + ++QT  G E+++ Q+RFV++VD+  +++  +ESRV+PN V L LS E    KD +KFGYG QL+
Sbjct:   28 DLPVFMQQVEQIEKERAKLPNPGLYESAPNELKGPVSPDAFDGFRFDFTRILGQTCSTSHSFLLGTPM---IPGGLYQFGANVVMGDPMDPSTFLMSKITPDGYLDARWNQKLSDNWKMRVKAQLKNEEHGSQALADFDYTGEDFTWNMKVSNGPLLGVSYLQSVTQNLALGGEAYYHGKHRKVISAYAGKWTDRDWVGMATYGAMGTLQLA-YLRKVG-HRIRYGSELVYNHSSGEAQTTCGVEMDLGQTRFVSSVDSTFRVATSIESRVLPNFV-LTLSAEGFPLKDAFKFGYGAQLS 321          
BLAST of NO03G02680 vs. NCBI_GenBank
Match: POM61188.1 (Mitochondrial Protein Translocase (MPT) Family [Phytophthora palmivora var. palmivora])

HSP 1 Score: 151.4 bits (381), Expect = 5.300e-33
Identity = 93/300 (31.00%), Postives = 165/300 (55.00%), Query Frame = 0
Query:   55 EMPELVKQAAEERRRQSQLKNPGSFEKIIEEGKRLSSVDCFEGFRLEIQKMVTPHFYMAHSFMLGVKLPHVDTSALYDFSTHVV----LPGNQLLMARLGHGGSMDGRIHFGLGDKTLVKMIASLQPNPAKDTFQMDAEHHGTDHSLTFRMTKGPQVYASYLQSITPSLALGGDTLFDFSEGGGVFSFGGKYTGGDWTGVAMLAQYGQICLVQYIKHVSPGRMALVADLVVNPLTLDSQTVLGAEVNMKQSRFVTTVDNGGKISALLESRVVPNAVTLLLSGEVDQAKDEYKFGYGFQLN 351
            ++P  ++Q  E  + +++L NPG +E    E K   S D F+GFR +  +++      +HSF+LG  +       LY F  +VV    +  +  LM+++   G +D R +  L +   +++ + L+          D ++ G D +   +++ GP +  SYLQS+T +LA+GG+  +       + ++ GK+T  DW G+A     G + L  Y++ V   R+   ++LV N  + ++QT  G E+++ Q+RFV++VD+  +++  +ESRV+PN V L LS E    KD++KFGYG QL+
Sbjct:   28 DLPVFMQQVEEIEKERAKLPNPGLYENAPNELKGPVSPDAFDGFRFDFTRILGARCSTSHSFLLGTPM---IPGGLYQFGANVVMGDPMDPSTFLMSKITPDGYLDARWNQKLSNNWKMRVKSQLKNEEHGSQALADFDYAGEDFTWNMKISNGPLLGVSYLQSVTQNLAVGGEAYYHGKHRKVISAYAGKWTERDWVGMATYGAMGTVQLA-YLRKVG-HRIRYGSELVYNHSSGEAQTTCGVEMDLGQTRFVSSVDSTFRVATSIESRVLPNFV-LTLSAEGFPLKDDFKFGYGAQLS 321          
BLAST of NO03G02680 vs. NCBI_GenBank
Match: XP_008616838.1 (hypothetical protein SDRG_12543 [Saprolegnia diclina VS20] >EQC29772.1 hypothetical protein SDRG_12543 [Saprolegnia diclina VS20])

HSP 1 Score: 151.0 bits (380), Expect = 7.000e-33
Identity = 95/293 (32.42%), Postives = 152/293 (51.88%), Query Frame = 0
Query:   59 LVKQAAEERRRQSQLKNPGSFEKIIEEGKRLSSVDCFEGFRLEIQKMVTPHFYMAHSFMLGVKLPHVDTSALYDFSTHVVL---PGNQLLMARLGHGGSMDGRIHFGLGDKTLVKMIASLQPNPAKDTFQMDAEHHGTDHSLTFRMTKGPQVYASYLQSITPSLALGGDTLFDFSEGGGVFSFGGKYTGGDWTGVAMLAQYGQICLVQYIKHVSPGRMALVADLVVNPLTLDSQTVLGAEVNMKQSRFVTTVDNGGKISALLESRVVPNAVTLLLSGEVDQAKDEYKFGYGFQ 349
            LV       +    L +PG+FE ++ E K +     FEGFR + Q+ + P F + H+ +LG   P +    +Y F    V+   P   LL  ++ H GS+D R H  L D   ++  A L+         +D +    D S   ++  G  +  +YLQS+T   A+GG+  +       + S+  KYT   WTG+A     G + L  Y++ VS  R+ L  +LV N  + ++ + LG EV+++Q+RFV+++D+  K++  LE +V+P  + LLLS E   A D+ KFGYGFQ
Sbjct:   39 LVAAVEAIEKAHKSLPHPGTFENVLGEVKSVLMPGTFEGFRFDFQRNLGPRFAVNHALLLG--CPQI-PGGVYQFGATTVVGDGPEPMLLRGQVSHDGSVDARWHARLSDHFKMRAQAQLKQEAHASQAMVDIDFSAADCSANLKVGNGLLLGVNYLQSVTKEWAIGGEGYYYGKHRKTIASYVAKYTDAKWTGIASYGSQGTLQL-HYLRKVS-DRVRLATELVYNAPSGEAASTLGVEVDLRQTRFVSSIDHTFKLATSLECKVLPQ-LQLLLSAEGTPAADDLKFGYGFQ 325          
BLAST of NO03G02680 vs. NCBI_GenBank
Match: XP_024583149.1 (porin family protein [Plasmopara halstedii] >CEG46780.1 porin family protein [Plasmopara halstedii])

HSP 1 Score: 151.0 bits (380), Expect = 7.000e-33
Identity = 95/301 (31.56%), Postives = 163/301 (54.15%), Query Frame = 0
Query:   54 VEMPELVKQAAEERRRQSQLKNPGSFEKIIEEGKRLSSVDCFEGFRLEIQKMVTPHFYMAHSFMLGVKLPHVDTSALYDFSTHVV----LPGNQLLMARLGHGGSMDGRIHFGLGDKTLVKMIASLQPNPAKDTFQMDAEHHGTDHSLTFRMTKGPQVYASYLQSITPSLALGGDTLFDFSEGGGVFSFGGKYTGGDWTGVAMLAQYGQICLVQYIKHVSPGRMALVADLVVNPLTLDSQTVLGAEVNMKQSRFVTTVDNGGKISALLESRVVPNAVTLLLSGEVDQAKDEYKFGYGFQLN 351
            VE+P  ++Q  +  + +S+L NPG +E    E K   S D F+GFR +  +++      +HSF+LG  +       LY F  +VV    +  +  LM+++   G +D R +  L  K  ++  + L+          D ++ G D +   +++ GP +  SYLQS+TP LALGG+  +       + ++ GK+T  DW  +      G + L  Y++ V   R+   ++LV N  + ++QT  G E+++ Q+RFV++VD+  +++  +E+RV+PN V L LS E    KD++KFGYG QL+
Sbjct:   91 VEVPVFMQQVEQIEKERSKLPNPGLYETAPNELKGPVSPDAFDGFRFDFTRILGQSCSTSHSFLLGTPM---IPGGLYQFGANVVMGDPMDPSTFLMSKITPDGYLDARWNQKLSSKWKLRAKSQLKNEEHGSQALADFDYTGEDFTWNIKLSNGPLLGCSYLQSVTPRLALGGEAYYHGKHRKIISAYAGKWTERDWVAMGTYGAMGTLQLA-YMRKVG-HRIRYGSELVYNYASGEAQTTCGVEMDLGQTRFVSSVDSTFRVATSIEARVLPNFV-LSLSAEGFPLKDDFKFGYGAQLS 385          
The following BLAST results are available for this feature:
BLAST of NO03G02680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29712.15.300e-15076.97mitochondrial protein translocase family [Nannochl... [more]
GAY00447.12.000e-3531.10Hypothetical protein PINS_008312 [Pythium insidios... [more]
GAX98165.12.000e-3531.10Hypothetical protein PINS_006006 [Pythium insidios... [more]
XP_002899904.18.200e-3431.67Mitochondrial Protein Translocase (MPT) Family [Ph... [more]
ETI36808.11.100e-3331.67hypothetical protein F443_17149 [Phytophthora para... [more]
XP_012206052.11.800e-3332.76hypothetical protein SPRG_11194 [Saprolegnia paras... [more]
XP_008912495.12.400e-3331.67hypothetical protein PPTG_16761 [Phytophthora para... [more]
POM61188.15.300e-3331.00Mitochondrial Protein Translocase (MPT) Family [Ph... [more]
XP_008616838.17.000e-3332.42hypothetical protein SDRG_12543 [Saprolegnia dicli... [more]
XP_024583149.17.000e-3331.56porin family protein [Plasmopara halstedii] >CEG46... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR001ncniR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005628NSK005628Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G02680.1NO03G02680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572144gene_1458Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100124g12gene927Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G02680.1NO03G02680.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G02680 ID=NO03G02680|Name=NO03G02680|organism=Nannochloropsis oceanica|type=gene|length=1697bp
AAGGGCTGCAATCAAGGCCTTTCTTGACTATCCGTGCTCCATCCACGTCT
CCCACCTCCACGATTGCCTACCCCACGCAGCGTCTCTCTCCTCCATCACT
GGAGTCACTTATTCTGAAATTTCAATATCTCGTTCTAGGTACCAATGGGC
GTATCTAGAGCGTGGCTTGTCGAAAGCACGCACGCGAGACTCTAGATCTC
CTCCCATCCTCATCATCATCCCATCGTCACACCACTGCACTCACTGGCGC
ATCCATTTTATTAACACACACTTGAATGTCTTAAACAAAGAACACAGAAA
GGATGAGCTTTTTACGGGCAGGTAGACGGGGGCTGCTGTCTTTTGGCAGC
GTCCCGGTGGTAGGCCTGGCCGTTGCCGCCGAGCAGCAACAGCATCAACA
GGAGCAGCACCACCAGGCATCCCGATGCGATGCCGCGGCCGCGGACGCCA
GTAGCATTTCCGTGGAGATGCCAGAGCTGGTAAAACAGGCGGCAGAAGAG
CGGCGAAGGCAATCGCAGCTCAAGAACCCGGGGTCATTTGAGAAAATCAT
TGAAGAGGGGAAGAGATTGTCGTCCGTCGACTGCTTTGAGGGCTTTCGAC
TGGAGATCCAGAAGATGGTGACACCACATTTCTACATGGCACATTCCTTC
ATGCTGGGCGTCAAGCTTCCTCACGTGGATACGAGTGCGCTGTACGATTT
CTCGACGCATGTTGTGCTACCGGGGAACCAGCTGCTAATGGCGCGCTTGG
GCCATGGAGGCTCGATGGACGGCAGgtgcgtgctgggctccatcacggga
gaggaagatatgattgaatgattagatggatgtatttcgaaaggatggag
gagaaaatgtttaggcttgtgaacgtacagtcttgccgggggggggaggc
gcactcttttctcctgttagatggcgcaacacggggtatcgtccacgaat
tacgatagcatcaaacaaacacaatcttcccttttctctaaccacctacc
tcgcatattcgatagGATCCACTTTGGTCTGGGCGACAAGACTTTAGTTA
AGATGATTGCCAGCTTGCAGCCCAACCCCGCCAAGGATACGTTTCAAATG
GACGCCGAGCACCACGGCACGGATCACTCCCTTACTTTCCGGATGACCAA
AGGCCCCCAAGTATATGCCTCCTACCTGCAAAGCATCACGCCTTCCTTGG
CATTGGGTGGGGATACACTGTTTGATTTCTCGGAGGGTGGTGGGGTGTTC
AGCTTTGGCGGGAAGTACACGGGGGGGGATTGGACCGGAGTGGCGATGCT
CGCACAATATGGGCAGATTTGCTTGGTGCAGTATATTAAACATGTGAGTC
CAGGAAGGATGGCTTTGGTGGCCGATTTGGTGGTGAACCCATTGACGTTG
GACAGCCAGACTGTGCTAGGCGCGGAGGTGAACATGAAACAGTCGCGGTT
TGTGACGACGGTGGATAACGGTGGGAAGATCTCGGCATTGCTTGAGTCGA
GGGTCGTCCCGAATGCGGTAACATTGTTGCTGTCTGGCGAGGTGGACCAG
GCCAAAGATGAGTACAAATTCGGATATGGGTTTCAACTAAACTTGTGAGG
AGGAGAGATGGAAGGGGGGGAGGGAGAAAGTGAGGGAAAGGGGAGAGGGG
ATGCGCGAAGCGAGAACAAAGTCAGTAAAGGAACAAAATGTCGTGTT
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protein sequence of NO03G02680.1

>NO03G02680.1-protein ID=NO03G02680.1-protein|Name=NO03G02680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=352bp
MSFLRAGRRGLLSFGSVPVVGLAVAAEQQQHQQEQHHQASRCDAAAADAS
SISVEMPELVKQAAEERRRQSQLKNPGSFEKIIEEGKRLSSVDCFEGFRL
EIQKMVTPHFYMAHSFMLGVKLPHVDTSALYDFSTHVVLPGNQLLMARLG
HGGSMDGRIHFGLGDKTLVKMIASLQPNPAKDTFQMDAEHHGTDHSLTFR
MTKGPQVYASYLQSITPSLALGGDTLFDFSEGGGVFSFGGKYTGGDWTGV
AMLAQYGQICLVQYIKHVSPGRMALVADLVVNPLTLDSQTVLGAEVNMKQ
SRFVTTVDNGGKISALLESRVVPNAVTLLLSGEVDQAKDEYKFGYGFQLN
L*
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Synonyms
Publications