NO03G02620, NO03G02620 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO03G02620
Unique Name	NO03G02620
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2430
Alignment location	chr3:750689..753118 +

Link to JBrowse

Properties


Property Name	Value
Description	Phosphoribosylpyrophosphate synthetase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr3	genome	chr3:750689..753118 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009165	nucleotide biosynthetic process
GO:0009058	biosynthetic process
GO:0006139	nucleobase-containing compound metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0000287	magnesium ion binding
GO:0004749	ribose phosphate diphosphokinase activity
GO:0016740	transferase activity
GO:0005488	binding

Vocabulary: **INTERPRO**
Term	Definition
IPR029057	PRTase-like
IPR029099	Pribosyltran_N
IPR005946	Rib-P_diPkinase

Homology

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BLAST of NO03G02620 vs. NCBI_GenBank
Match: EWM29707.1 (phosphoribosylpyrophosphate synthetase [Nannochloropsis gaditana])

HSP 1 Score: 645.2 bits (1663), Expect = 1.500e-181
Identity = 347/431 (80.51%), Postives = 365/431 (84.69%), Query Frame = 0

Query:    3 LLSSMRRGSWNLASRTVVAAPRSASRESRQGPVALRLWGAQQDTREGGWTQVAALLMGGTALFGAMGMVDVVHNEAAATPTQEPXXXXXXXXXXXXXXXXXXXXXXXKVVKTSGMKLFSGNANTRLAAEIAGQLGMNLGKITVSRFADGEVNVMVHENVRGKDVYIVQPTCSPVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGTVGVSYFGDKDLHNPVIVSPDAGGVYRAKKFREGLAQKYDVDAGLAMIIKQRARANEVDRMDLVGSVVDSDVVIVDDMIDTAGTLAKAADVLVTNGARRVYSFASHGLFSGPANERIVKSKLEEVVVLNTIPLTHAHEANAKIVQLSVAPLIAQAIYNIHQKKSISALFK 434
            +L+++RR  W+L  +  + + RS+  E   G VA R W +Q++ R   W+ +     GG    GA+G +DV   EA A P  +                        KVVKTSGMKLFSGNANTRLAAEIAGQLGMNLGKITVSRFADGEVNVMVHENVRGKDVYIVQPTCSPVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGTVGVSYFGDKDLHNPVIVSPDAGGVYRAKKFREGLAQKYDVDAGLAMIIKQRARANEVDRMDLVGSVVDSDVVIVDDMIDTAGTLAKAADVLV NGARRVYSFASHGLFSGPANERI +SKLEEVVVLNTIPLT AHEANAKIVQLSVAPLIAQAIYNIHQKKSISALFK
Sbjct:    1 MLANVRRSIWSLRGQVGIISSRSSGAE--VGIVAFRYWSSQRERRHEHWSTLMTYWFGGALAVGALGSMDVAQTEAEAAPKVD---------SPASTEAMAASARSGKVVKTSGMKLFSGNANTRLAAEIAGQLGMNLGKITVSRFADGEVNVMVHENVRGKDVYIVQPTCSPVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGTVGVSYFGDKDLHNPVIVSPDAGGVYRAKKFREGLAQKYDVDAGLAMIIKQRARANEVDRMDLVGSVVDSDVVIVDDMIDTAGTLAKAADVLVANGARRVYSFASHGLFSGPANERISQSKLEEVVVLNTIPLTPAHEANAKIVQLSVAPLIAQAIYNIHQKKSISALFK 420

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BLAST of NO03G02620 vs. NCBI_GenBank
Match: CBJ31402.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 513.1 bits (1320), Expect = 8.600e-142
Identity = 261/320 (81.56%), Postives = 287/320 (89.69%), Query Frame = 0

Query:  114 TSGMKLFSGNANTRLAAEIAGQLGMNLGKITVSRFADGEVNVMVHENVRGKDVYIVQPTCSPVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGTVGVSYFGDKDLHNPVIVSPDAGGVYRAKKFREGLAQKYDVDAGLAMIIKQRARANEVDRMDLVGSVVDSDVVIVDDMIDTAGTLAKAADVLVTNGARRVYSFASHGLFSGPANERIVKSKLEEVVVLNTIPLTHAHEANAKIVQLSVAPLIAQAIYNIHQKKSISALFK 434
            + GMK+FSGNAN  LA +IA  LG+NLG++ V RFADGEVNVMV ENVRGKDVYI+QPTC PVNENL+ELLLMVSTMRRSSARRITAVIPYYGYARQDRKM ARVPISAADVARL+EAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGG +GV YFGD DLHNPV+VSPDAGGVYRAKKFREGLA +Y +DAGLAMIIKQRA+ANEVDRMDLVGSV DSDV+IVDDMIDTAGTL KAA VL   GARRV++FASHGLF+GPAN+R+  S+L EVVVL+TIPL+     N KI+QLSVA L+AQA+YNIH KKSISALFK
Sbjct:  142 SGGMKIFSGNANPALAKDIAAYLGINLGRVKVDRFADGEVNVMVKENVRGKDVYIIQPTCMPVNENLVELLLMVSTMRRSSARRITAVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGVIGVGYFGDTDLHNPVVVSPDAGGVYRAKKFREGLAHRYGLDAGLAMIIKQRAKANEVDRMDLVGSVKDSDVIIVDDMIDTAGTLCKAASVLKEYGARRVFAFASHGLFNGPANQRLADSELSEVVVLDTIPLSPDCANNPKIIQLSVAHLLAQAVYNIHHKKSISALFK 461

[Close]

BLAST of NO03G02620 vs. NCBI_GenBank
Match: GAX28465.1 (ribose-phosphate pyrophosphokinase [Fistulifera solaris])

HSP 1 Score: 496.9 bits (1278), Expect = 6.400e-137
Identity = 247/321 (76.95%), Postives = 283/321 (88.16%), Query Frame = 0

Query:  114 TSGMKLFSGNANTRLAAEIAGQLGMNLGKITVSRFADGEVNVMVHENVRGKDVYIVQPTCSPVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGTVGVSYFGDKDLHNPVIVSPDAGGVYRAKKFREGLAQKYDV-DAGLAMIIKQRARANEVDRMDLVGSVVDSDVVIVDDMIDTAGTLAKAADVLVTNGARRVYSFASHGLFSGPANERIVKSKLEEVVVLNTIPLTHAHEANAKIVQLSVAPLIAQAIYNIHQKKSISALFK 434
            + G+K+FSGN N  L+ EIA  LG+NLGK TV RFADGEVN +++ENVRGKDVYIVQPTC PVN+N+MELLLM+ST+RR+SARRIT VIPYYGYARQDRKMQARVPISAADVARL+EAMGVDRV+AVDLHCGQIQGFFGPRVPVDNLDGG VG+ YFG KDLHNPV+VSPDAGGVYRAKKF+EGL QKY++ D GLAMI+KQRARA  VD+MDLVG V D D ++VDDMIDTAGTL KAADVL+ +GARRV++FASHGL SGP N+RI  S +EEVV+LNTIP +   EAN K+ +LSVAPL+AQAI+NIH KKSISALFK
Sbjct:  152 SGGLKVFSGNGNMSLSLEIARHLGINLGKATVGRFADGEVNCVINENVRGKDVYIVQPTCPPVNDNIMELLLMISTLRRASARRITVVIPYYGYARQDRKMQARVPISAADVARLMEAMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGIVGLDYFGCKDLHNPVVVSPDAGGVYRAKKFKEGLEQKYEMNDVGLAMIVKQRARAGAVDQMDLVGDVKDCDCILVDDMIDTAGTLCKAADVLIASGARRVFAFASHGLLSGPGNDRIANSNIEEVVILNTIPTSPQREANEKLTELSVAPLLAQAIFNIHAKKSISALFK 472

[Close]

BLAST of NO03G02620 vs. NCBI_GenBank
Match: GAX19366.1 (ribose-phosphate pyrophosphokinase [Fistulifera solaris])

HSP 1 Score: 496.9 bits (1278), Expect = 6.400e-137
Identity = 247/321 (76.95%), Postives = 283/321 (88.16%), Query Frame = 0

Query:  114 TSGMKLFSGNANTRLAAEIAGQLGMNLGKITVSRFADGEVNVMVHENVRGKDVYIVQPTCSPVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGTVGVSYFGDKDLHNPVIVSPDAGGVYRAKKFREGLAQKYDV-DAGLAMIIKQRARANEVDRMDLVGSVVDSDVVIVDDMIDTAGTLAKAADVLVTNGARRVYSFASHGLFSGPANERIVKSKLEEVVVLNTIPLTHAHEANAKIVQLSVAPLIAQAIYNIHQKKSISALFK 434
            + G+K+FSGN N  L+ EIA  LG+NLGK TV RFADGEVN +++ENVRGKDVYIVQPTC PVN+N+MELLLM+ST+RR+SARRIT VIPYYGYARQDRKMQARVPISAADVARL+EAMGVDRV+AVDLHCGQIQGFFGPRVPVDNLDGG VG+ YFG KDLHNPV+VSPDAGGVYRAKKF+EGL QKY++ D GLAMI+KQRARA  VD+MDLVG V D D ++VDDMIDTAGTL KAADVL+ +GARRV++FASHGL SGP N+RI  S +EEVV+LNTIP +   EAN K+ +LSVAPL+AQAI+NIH KKSISALFK
Sbjct:  152 SGGLKVFSGNGNMSLSLEIARHLGINLGKATVGRFADGEVNCVINENVRGKDVYIVQPTCPPVNDNIMELLLMISTLRRASARRITVVIPYYGYARQDRKMQARVPISAADVARLMEAMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGIVGLDYFGCKDLHNPVVVSPDAGGVYRAKKFKEGLEQKYEMNDVGLAMIVKQRARAGAVDQMDLVGDVKDCDCILVDDMIDTAGTLCKAADVLIASGARRVFAFASHGLLSGPGNDRIANSNIEEVVILNTIPTSPQREANEKLTELSVAPLLAQAIFNIHAKKSISALFK 472

[Close]

BLAST of NO03G02620 vs. NCBI_GenBank
Match: OEU16912.1 (putative ribose-phosphate diphosphokinase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 496.5 bits (1277), Expect = 8.300e-137
Identity = 242/321 (75.39%), Postives = 281/321 (87.54%), Query Frame = 0

Query:  114 TSGMKLFSGNANTRLAAEIAGQLGMNLGKITVSRFADGEVNVMVHENVRGKDVYIVQPTCSPVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGTVGVSYFGDKDLHNPVIVSPDAGGVYRAKKFREGLAQKYDV-DAGLAMIIKQRARANEVDRMDLVGSVVDSDVVIVDDMIDTAGTLAKAADVLVTNGARRVYSFASHGLFSGPANERIVKSKLEEVVVLNTIPLTHAHEANAKIVQLSVAPLIAQAIYNIHQKKSISALFK 434
            + G+KLFSGN N  L+ EI   LG+NLGK TV RFADGE N+++HENVRGKD YI+QPTC PVN+N+MELLLM+ST+RR+SARRIT VIPYYGYARQDRKMQARVPISAADVARL+E+MGVDRV+AVDLHCGQIQGFFGPRVPVDNLDGG VG+ YFG KDLHNPV+VSPDAGGVYRAKKF+EGL  KYD+ D GLAMI+KQRARA +VDRMDLVG V + D ++VDDMIDTAGTL KAADVL+ NGARRV++FASHGL SGP N+R+  SK+EE+V+LNTIP +   EAN K+  LSVAPL+AQAI+N+H KKS+SALFK
Sbjct:   19 SGGLKLFSGNGNLALSLEICRYLGINLGKATVGRFADGEANIVIHENVRGKDCYIIQPTCPPVNDNIMELLLMISTLRRASARRITVVIPYYGYARQDRKMQARVPISAADVARLIESMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGIVGLDYFGSKDLHNPVVVSPDAGGVYRAKKFKEGLMHKYDMQDIGLAMIVKQRARAGKVDRMDLVGDVKNCDCILVDDMIDTAGTLCKAADVLIENGARRVFAFASHGLLSGPGNDRLANSKMEEIVILNTIPTSPQREANEKLTMLSVAPLLAQAIFNVHAKKSLSALFK 339

[Close]

BLAST of NO03G02620 vs. NCBI_GenBank
Match: EJK73187.1 (hypothetical protein THAOC_05198 [Thalassiosira oceanica])

HSP 1 Score: 490.3 bits (1261), Expect = 6.000e-135
Identity = 249/319 (78.06%), Postives = 275/319 (86.21%), Query Frame = 0

Query:  116 GMKLFSGNANTRLAAEIAGQLGMNLGKITVSRFADGEVNVMVHENVRGKDVYIVQPTCSPVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGTVGVSYFGDKDLHNPVIVSPDAGGVYRAKKFREGLAQKYD-VDAGLAMIIKQRARANEVDRMDLVGSVVDSDVVIVDDMIDTAGTLAKAADVLVTNGARRVYSFASHGLFSGPANERIVKSKLEEVVVLNTIPLTHAHEANAKIVQLSVAPLIAQAIYNIHQKKSISALFK 434
            G+KLFSGN N  L+ EIA  LG+NLG+ TVS FADGE+NVMVHENVRGKDVYI+QPTC PVN NLMELLLMVS + R+SARR+T VIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRV+AVDLHCGQIQGFFGPRVPVDNLDGG VG+ +FG KDLHNPVIVSPDAGGVYRAKKF+EGLA KY   D G+AMIIKQRARA  VD+MDLVG V D D +IVDDMIDTAGTL KAADVLV  GARRV++FASHGL SGP N+RI  S +EE V+LNTIP T    AN K+V+LSVAPL+AQ I+NIH K+SISALFK
Sbjct:   79 GLKLFSGNGNMTLSLEIAKLLGVNLGRATVSSFADGEINVMVHENVRGKDVYIIQPTCPPVNNNLMELLLMVSCLNRASARRVTVVIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGIVGIDHFGGKDLHNPVIVSPDAGGVYRAKKFKEGLAYKYGWEDVGIAMIIKQRARAGSVDQMDLVGDVKDCDCIIVDDMIDTAGTLCKAADVLVDQGARRVFAFASHGLLSGPGNDRIANSSMEECVILNTIPSTPQRAANDKLVELSVAPLLAQTIFNIHAKRSISALFK 397

[Close]

BLAST of NO03G02620 vs. NCBI_GenBank
Match: XP_002177469.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51932.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 483.0 bits (1242), Expect = 9.500e-133
Identity = 245/307 (79.80%), Postives = 272/307 (88.60%), Query Frame = 0

Query:  128 LAAEIAGQLGMNLGKITVSRFADGEVNVMVHENVRGKDVYIVQPTCSPVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGTVGVSYFGDKDLHNPVIVSPDAGGVYRAKKFREGLAQKYDV-DAGLAMIIKQRARANEVDRMDLVGSVVDSDVVIVDDMIDTAGTLAKAADVLVTNGARRVYSFASHGLFSGPANERIVKSKLEEVVVLNTIPLTHAHEANAKIVQLSVAPLIAQAIYNIHQKKSISALFK 434
            LA E+   LG+ LGK TV RFADGEVNV++HENVRGKDVYIVQPT  PVN+N+MELLLMVST+RR+SARRIT VIPYYGYARQDRKMQARVPISAADVARL+E+MGVDRV+AVDLHCGQIQGFFGPRVPVDNLDGG VG+ YFG KDLH+PV+VSPDAGGVYRAKKF+EGL QKYD+ D GLAMI+KQRARA  VD+MDLVG V D D +IVDDMIDTAGTL KAADVLV NGARRV++FASHGL SGP N+RI  SKLEEVV+LNTIP +   EAN K+ QLSVAPL+AQAI+NIH KKSISALFK
Sbjct:    3 LALEVTRHLGIGLGKATVGRFADGEVNVVIHENVRGKDVYIVQPTGPPVNDNVMELLLMVSTLRRASARRITVVIPYYGYARQDRKMQARVPISAADVARLMESMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGIVGLDYFGCKDLHSPVVVSPDAGGVYRAKKFKEGLEQKYDMQDLGLAMIVKQRARAGSVDQMDLVGDVKDCDCIIVDDMIDTAGTLCKAADVLVANGARRVFAFASHGLLSGPGNDRIANSKLEEVVILNTIPTSPQREANDKLTQLSVAPLLAQAIFNIHAKKSISALFK 309

[Close]

BLAST of NO03G02620 vs. NCBI_GenBank
Match: XP_009514532.1 (hypothetical protein PHYSODRAFT_257610 [Phytophthora sojae] >EGZ27257.1 hypothetical protein PHYSODRAFT_257610 [Phytophthora sojae])

HSP 1 Score: 479.2 bits (1232), Expect = 1.400e-131
Identity = 251/324 (77.47%), Postives = 276/324 (85.19%), Query Frame = 0

Query:  110 KVVKTSGMKLFSGNANTRLAAEIAGQLGMNLGKITVSRFADGEVNVMVHENVRGKDVYIVQPTCSPVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGTVGVSYFGDKDLHNPVIVSPDAGGVYRAKKFREGLAQKYDV-DAGLAMIIKQRARANEVDRMDLVGSVVDSDVVIVDDMIDTAGTLAKAADVLVTNGARRVYSFASHGLFSGPANERIVKSKLEEVVVLNTIPLTHAHEANAKIVQLSVAPLIAQAIYNIHQKKSISALF 433
            K  K +G+K+FSGNAN  LAA +A  +G+ LGKITV RFADGEVN+MVHENVRGKDVYIVQPTC PVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQDRKM ARVPISAADVARLLEAMGVDRV+AVDLHCGQIQGFFGP VPVDNLDGG VGVSYFG+ +L NPV+VSPDAGGV RAKKFRE L  KY + + GLAMIIKQR +A E+DRMDLVG V  SD +IVDDMIDTAGTL KAA  L  +GAR VY+FASHGLF+G ANERI KS L+EVVV+NT PL  + E N KIVQL +APL+AQAI NIH KKS+S LF
Sbjct:   54 KQPKINGLKIFSGNANHELAANVAKLVGVQLGKITVERFADGEVNLMVHENVRGKDVYIVQPTCVPVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQDRKMAARVPISAADVARLLEAMGVDRVIAVDLHCGQIQGFFGPHVPVDNLDGGLVGVSYFGNHELVNPVVVSPDAGGVARAKKFREWLVGKYGLPNTGLAMIIKQRIKAGEIDRMDLVGQVEGSDCIIVDDMIDTAGTLCKAAQHLADHGARNVYAFASHGLFNGAANERIKKSALKEVVVVNTTPLPKSCEGNEKIVQLDIAPLLAQAIQNIHGKKSVSQLF 377

[Close]

BLAST of NO03G02620 vs. NCBI_GenBank
Match: OWZ22008.1 (Ribose-phosphate pyrophosphokinase [Phytophthora megakarya])

HSP 1 Score: 479.2 bits (1232), Expect = 1.400e-131
Identity = 251/324 (77.47%), Postives = 276/324 (85.19%), Query Frame = 0

Query:  110 KVVKTSGMKLFSGNANTRLAAEIAGQLGMNLGKITVSRFADGEVNVMVHENVRGKDVYIVQPTCSPVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGTVGVSYFGDKDLHNPVIVSPDAGGVYRAKKFREGLAQKYDV-DAGLAMIIKQRARANEVDRMDLVGSVVDSDVVIVDDMIDTAGTLAKAADVLVTNGARRVYSFASHGLFSGPANERIVKSKLEEVVVLNTIPLTHAHEANAKIVQLSVAPLIAQAIYNIHQKKSISALF 433
            K  K +G+K+FSGNAN  LAA +A  +G+ LGKITV RFADGEVN+MVHENVRGKDVYIVQPTC PVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQDRKM ARVPISAADVARLLEAMGVDRV+AVDLHCGQIQGFFGP VPVDNLDGG VGVSYFG+ +L NPV+VSPDAGGV RAKKFRE L  KY + + GLAMIIKQR +A E+DRMDLVG V  SD +IVDDMIDTAGTL KAA  L  +GAR VY+FASHGLF+G ANERI KS L+EVVV+NT PL  + E N KIVQL +APL+AQAI NIH KKS+S LF
Sbjct:   48 KQPKINGLKIFSGNANHELAANVAKLVGVQLGKITVERFADGEVNLMVHENVRGKDVYIVQPTCVPVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQDRKMAARVPISAADVARLLEAMGVDRVIAVDLHCGQIQGFFGPHVPVDNLDGGLVGVSYFGNHELVNPVVVSPDAGGVARAKKFREWLVGKYGLPNTGLAMIIKQRIKAGEIDRMDLVGQVEGSDCIIVDDMIDTAGTLCKAAQHLADHGARNVYAFASHGLFNGAANERIKKSALKEVVVVNTTPLPKSCEGNEKIVQLDIAPLLAQAIQNIHGKKSVSQLF 371

[Close]

BLAST of NO03G02620 vs. NCBI_GenBank
Match: GAY03942.1 (ribose-phosphate pyrophosphokinase [Pythium insidiosum])

HSP 1 Score: 478.4 bits (1230), Expect = 2.300e-131
Identity = 250/324 (77.16%), Postives = 278/324 (85.80%), Query Frame = 0

Query:  110 KVVKTSGMKLFSGNANTRLAAEIAGQLGMNLGKITVSRFADGEVNVMVHENVRGKDVYIVQPTCSPVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGTVGVSYFGDKDLHNPVIVSPDAGGVYRAKKFREGLAQKYDV-DAGLAMIIKQRARANEVDRMDLVGSVVDSDVVIVDDMIDTAGTLAKAADVLVTNGARRVYSFASHGLFSGPANERIVKSKLEEVVVLNTIPLTHAHEANAKIVQLSVAPLIAQAIYNIHQKKSISALF 433
            K  K +G+K+FSGNAN  LA  +A  +G+ LGKITV RFADGEVNVMVHENVRGKDVYIVQPTC PVNENLMELLLMVSTMRR+SARRITAVIPYYGYARQDRKM ARVPISAADVARLLEAMGVDRV+AVDLHCGQIQGFFGPRVPVDNLDGG VGVSYFG+ +L NPVIVSPDAGGV RAKKFRE L  K+ + + GLAMIIKQR +ANE+DRMDLVG+V  SD +IVDDMIDTAGTL KAA  L  +GAR VY+FASHGLF+G A+ERI KS L+EVVV+NT PL  + + N KIVQL +APL+AQAI NIH KKS+S LF
Sbjct:   53 KQPKINGLKIFSGNANKELAGNVAKLVGVPLGKITVERFADGEVNVMVHENVRGKDVYIVQPTCVPVNENLMELLLMVSTMRRASARRITAVIPYYGYARQDRKMAARVPISAADVARLLEAMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGLVGVSYFGNHELVNPVIVSPDAGGVARAKKFREWLVSKHGLPNTGLAMIIKQRVKANEIDRMDLVGNVEGSDCIIVDDMIDTAGTLCKAAQHLADHGARNVYAFASHGLFNGAASERIKKSALKEVVVVNTTPLPESCKGNEKIVQLDIAPLVAQAIRNIHGKKSVSMLF 376

The following BLAST results are available for this feature:

BLAST of NO03G02620 vs. NCBI_GenBank

BLAST of NO03G02620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM29707.1	1.500e-181	80.51	phosphoribosylpyrophosphate synthetase [Nannochlor...	[more]
CBJ31402.1	8.600e-142	81.56	conserved unknown protein [Ectocarpus siliculosus]	[more]
GAX28465.1	6.400e-137	76.95	ribose-phosphate pyrophosphokinase [Fistulifera so...	[more]
GAX19366.1	6.400e-137	76.95	ribose-phosphate pyrophosphokinase [Fistulifera so...	[more]
OEU16912.1	8.300e-137	75.39	putative ribose-phosphate diphosphokinase [Fragila...	[more]
EJK73187.1	6.000e-135	78.06	hypothetical protein THAOC_05198 [Thalassiosira oc...	[more]
XP_002177469.1	9.500e-133	79.80	predicted protein [Phaeodactylum tricornutum CCAP ...	[more]
XP_009514532.1	1.400e-131	77.47	hypothetical protein PHYSODRAFT_257610 [Phytophtho...	[more]
OWZ22008.1	1.400e-131	77.47	Ribose-phosphate pyrophosphokinase [Phytophthora m...	[more]
GAY03942.1	2.300e-131	77.16	ribose-phosphate pyrophosphokinase [Pythium insidi...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL068	nonsL068	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR001	ncniR001	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR000	ncniR000	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR052	ngnoR052	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK005636	NSK005636	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO03G02620.1	NO03G02620.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|6596	gene_1453	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100124g18	gene934	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO03G02620.1	NO03G02620.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO03G02620 ID=NO03G02620|Name=NO03G02620|organism=Nannochloropsis oceanica|type=gene|length=2430bp
CTGCAAGAAAGCCCCCACACTACATGATAGAAGCCGCACAGAGGCGGTGG
TTTGCGCGTTCTATTGTCTTATCAGGATTTCCTGCCTCTTGTGGCCCGGA
TAAACCACCTGCCGGTCGAGTCTTGGTGGCTTGTTTTTCCACCAATCAAG
GCATCGAATAAAAGGCCGCGCTTGATATTCTGGCCTCCAACCCCCCGCAA
CTTGCCCTCCTCGCCTCCCACCCCTCTCTAGCGCCATGCTAGATAGCCTG
TCCCTCCTGCCCTTTAGGGCCTCTCAAAAGCATGACTTCTTTTTAGTGTG
ATGCGCTAATGCTTTTTCTCGTACTCTATGTCTTCTCCACACCACCACCG
ATAGGAGGCGCGCCGGAGCGGGTGCCCAAGTGGACTAGGACAACTTCTTC
GCTTGTGGAGGCGGGGCTGCTGCTGCCGCTTGTTTACCGCAAATACCGGG
CACAATGGTTTTACTATCGAGTATGCGGCGTGGCTCATGGAACCTGGCCA
GCCGGACGGTGGTGGCTGCCCCAAGGAGTGCTTCGAGGGAATCACGGCAA
GGGCCGGTCGCCTTGCGGTTGTGGGGGGCCCAGCAAGACACGCGAGAAGG
AGGGTGGACACAAGTGGCGGCCTTGTTGATGGGGGGAACAGCATTGTTTG
GGGCGATGGGCATGGTAGACGTTGTCCACAATGAGGCAGCTGCGACTCCC
ACTgtaagcaagccatgagggaaagacaggaagcagggataggaggtgtg
ctcacgaggattatgacgctgagcattgcacaaagccaattcaaactggc
gtatttctccgacaaatttaaattgtgagtctgtttttaatgttgtcatt
tcttttatccttacttacagCAGGAGCCCTTAGCGAGCGCGGAGGAGGCA
GCGGCCGCAACGGCAGCATCCGGCGCGGCGGCTGCAAGGAAAGCAGGCAA
GGTCGTCAAGACGAGCGGGATGAAGCTCTTCAGTGGAAATGCAAACACTC
GACTGGCGGCAGAGATTGCGGGCCAATTGGGCATGAATCTGGGGAAAATC
ACCGTATCGCGCTTTGCGGACGGGGAGGTGAATGTGATGGTCCACGAGAA
TGTGCGCGGCAAGGACGTGTATATCGTGCAACCCACATGCTCGCCCGTGA
ATGAGAACCTCATGGAGCTCTTGCTGATGGTATCCACCATGCGTCGCTCT
TCTGCCCGACGGATCACGGCCGTCATTCCCTATTATGGCTATGCCCGCCA
AGACAGGAAGATGCAGGCGCGAGTTCCGATCTCGGCCGCTGATGTCGCCA
GGCTATTGGAAGCCATGGGGGTGGATCGTGTGGTGGCCGTCGATTTGCAC
TGTGGCCAGATCCAGGGTTTCTTCGGTCCGCGTGTGCCGGTGGATAACTT
GGATGGAGGCACGGTAGGTGTCTCTTACTTTGGAGACAAGGACTTGCATA
ACCCTGTGATAGTGTCTCCCGATGCGGGGGGAGTGTATCGTGCCAAGAAG
TTCCGCGAAGGCCTCGCGCAGAAGTACGACGTGGATGCGGGCTTGGCCAT
GATTATCAAGCAGCGGGCAAGGGCGAATGAGGTGGATCGGATGGATTTGG
TGGGCTCGGTGGTGGACTCTGATGTGGTGATTGTTGATGACATGATTGAC
ACTGCGGGGACTCTCGCCAAGGCGGCGGACGTCTTGGTCACCAATGGAGC
CCGGCGTGTCTATTCGTTTGCGAGCCATGGCTTGTTTTCTGGCCCAGCAA
ATGAGCGGATTGTCAAGTCCAAGCTTGAAGAGGTGGTGGTGTTGAATACC
ATCCCCCTTACTCACGCCCATGAGGCGAACGCCAAGATCGTGCAGTTGTC
GGTTGCCCCGTTGATCGCCCAGGCGATTTACAACATTCACCAAAAGAAGT
CAATCTCTGCATTGTTCAAGTAAGAGAACAGCAGGGACTGACGGAGAGAG
GAAGAAAGGGCAGGTGTGGTGCTTGATTTGTGTGTTCGTTCAAATGAGTG
CGAAGCATGCATGCGTGGGTTATGGTGAATTGGCCACTGCGAAGACGAAA
GATAATGGAGGGAGAGGATGATGACAAATTTTGCTTGCTTGAGTTTGGCT
GGCCAGACAGGGCTTTGCCCCTTTGTGTGGGTTGGTGAGCAAAACATATA
ATGATTGATGGATGATGGATTCGGGCTGAGAAGACAGCGCGTCAACAGGT
TAGCAAGAGCCTAAACGTAATTGATCCGTTTAATTGTAGGTAGCTGGTTC
ATGAGAAAGACAAGACATCCGATGGATAGGTAACCGAAAAAAGACCGTGT
AGACGGTGCATGCATTAGGACGAGTGGCGGAGCCTGCTTCGCTCTCAAGC
TAGGTGTCTCAACAGAGCAGGAAAAGACGGGAAAAATGAAGATGCGCGAC
GCAAACGCCGCCACAGCAGTAAATCATGAC

protein sequence of NO03G02620.1

>NO03G02620.1-protein ID=NO03G02620.1-protein|Name=NO03G02620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=434bp
MVLLSSMRRGSWNLASRTVVAAPRSASRESRQGPVALRLWGAQQDTREGG
WTQVAALLMGGTALFGAMGMVDVVHNEAAATPTQEPLASAEEAAAATAAS
GAAAARKAGKVVKTSGMKLFSGNANTRLAAEIAGQLGMNLGKITVSRFAD
GEVNVMVHENVRGKDVYIVQPTCSPVNENLMELLLMVSTMRRSSARRITA
VIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGF
FGPRVPVDNLDGGTVGVSYFGDKDLHNPVIVSPDAGGVYRAKKFREGLAQ
KYDVDAGLAMIIKQRARANEVDRMDLVGSVVDSDVVIVDDMIDTAGTLAK
AADVLVTNGARRVYSFASHGLFSGPANERIVKSKLEEVVVLNTIPLTHAH
EANAKIVQLSVAPLIAQAIYNIHQKKSISALFK*

Synonyms

Publications