NO03G02530, NO03G02530 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G02530 vs. NCBI_GenBank
Match: EWM29699.1 (rna binding protein [Nannochloropsis gaditana]) HSP 1 Score: 318.5 bits (815), Expect = 3.700e-83 Identity = 229/540 (42.41%), Postives = 276/540 (51.11%), Query Frame = 0 Query: 1 MTFTSYTPGSISSFLQDTAEVQVKPATVLAXXXXXXXXXXXXXXXXXXXXXXTVNSANASLFSETALAKFAPVEPLPG---SIVQSERRRKTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGSL----SIRDGAFTSKEEFSVINNIKEAKRTKKQGLPVVGAPVVIMEKDKGAVTASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADWK-----------DEEGPQEEVEEEVGQDEAKDRRTIFVGNLPTSINKKRVQSLFKEYGEIESVRFRSMALAGAKVDDHGNQQLVKKVSANKRLLSDTKDTFNAYVVFVKEKAAVAALAVNKKVVEEKHLRVDRVGNAATRDPKRSVFLGNLPFDAKEDAVRAHVAKGLEGGERDVEGVRLVRDSETLQGKGFGFILLKDRASVAAALRLNESTFLGRKIRVTVCGKRTKQRNDDGKPRVKPKHNAKRRLEAAGPRKRGVSSSSSPSKSSLGDKAKPFFEGRRVSADAGVVNLKKRGRSAPKKSSGRFKNGKKGVGAGAGGKKKGKK 523 M SY PG I SFL+ E +P++ A +++S+FSE AKF PV+PLPG + +RRRKT+ T S+ S D T + N +G V P ++ E A WK D G E E ++ +++AK+RRTIFVGNLPTSI+KKRVQ++FKEYGEIESVRFRSMALAGAK+DDHGNQ+L KKVSANKRLLSD KDTFNAYVVF++E +A AA+A N ++VE KHLRVDRVG+ RDPKRSVFLGNLPFDAKED +RAHVA+ LEGG DVEGVRLVRD ET QGKGFGF+LLKD+ASVAAALRLN ++F GRKIRVT C P + + K FEGRR S G +++KKRG KKS G KG A GG+KK K Sbjct: 1 MPCRSYKPGDILSFLRTDVE---QPSSPSASAQGGSIVKGSKKRKHQAGAPSKSTQSSSSIFSEATQAKFVPVQPLPGLNMDLNNIKRRRKTKKGKERPIRPSKKEKAAAYRAGEGEMVGSTAPSVESTYSAPDNETTKPMKTLSTNFALSQNEEAGRGEDVTSLPPLVRE-----------------------------------HVPRDAHWKQGTENKKSRRDDTGGINFEAEVDIDKEKAKERRTIFVGNLPTSISKKRVQNIFKEYGEIESVRFRSMALAGAKIDDHGNQRLAKKVSANKRLLSDAKDTFNAYVVFLREDSAEAAIAANNRLVEAKHLRVDRVGSETIRDPKRSVFLGNLPFDAKEDTIRAHVAQELEGGPGDVEGVRLVRDPETQQGKGFGFVLLKDKASVAAALRLNGTSFQGRKIRVTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQFP-PGARPEIIKASFEGRRASDTFGRLSVKKRGSGPAKKSKG----ASKGNRARKGGQKKTNK 497
BLAST of NO03G02530 vs. NCBI_GenBank
Match: CBN78849.2 (white-brown-complex ABC transporter family (Partial), partial [Ectocarpus siliculosus]) HSP 1 Score: 194.9 bits (494), Expect = 6.300e-46 Identity = 111/205 (54.15%), Postives = 135/205 (65.85%), Query Frame = 0 Query: 230 RTIFVGNLPTSINKKRVQSLFKEYGEIESVRFRSMALAGAKVDDHGNQQLVKKVSANKRLL-SDTKDTFNAYVVFVKEKAAVAALAVNKKVVEEKHLRVDRVGNAATRDPKRSVFLGNLPFDAKEDAVRAHVAKGLEGGERDVEGVRLVRDSETLQGKGFGFILLKDRASVAAALRLNESTFLGRKIRVTVCGKRTKQRNDDGKP 434 RT+FVGNLPTS K+V++ FKEYG +ESVR RS+A+ G VD G+QQLV+KV N+ ++ + K + NAYVV+ + ALA N V KH+RVDR + D RSVFLGNLP DA E+ VR A LEGG + VEGVRLVRD TL GKGFG++LL DRA AAAL L + GR +RV CGKRTK R KP Sbjct: 330 RTVFVGNLPTSFTPKKVKAAFKEYGAVESVRLRSVAVQGMAVDKAGDQQLVRKVCVNRGMVDEEVKSSVNAYVVYKDCASVEKALAANGTDVGGKHVRVDR-AKSGEYDHTRSVFLGNLPMDAGEEEVRELFASKLEGGPKSVEGVRLVRDKATLVGKGFGYVLLADRALAAAALALQGTKLKGRPLRVMPCGKRTKGRGGVAKP 533
BLAST of NO03G02530 vs. NCBI_GenBank
Match: OQS04672.1 (hypothetical protein THRCLA_03115 [Thraustotheca clavata]) HSP 1 Score: 178.3 bits (451), Expect = 6.100e-41 Identity = 110/258 (42.64%), Postives = 149/258 (57.75%), Query Frame = 0 Query: 213 PQEEVEEEVGQDEAKD---RRTIFVGNLPTSINKKRVQSLFKEYGEIESVRFRSMALAGAKVDDHGNQQLVKKVSANKRLLSDTKDTFNAYVVFVKEKAAVAALAVNKKVVEEKHLRVDRVGNAATRDPKRSVFLGNLPFDAKEDAVRAHVAKGLEGGERD-----VEGVRLVRDSETLQGKGFGFILLKDRASVAAALRLNESTFLGRKIRVTVCGKRTKQRNDDGKP------RVKPKHNA------KRRLEAAGP 451 P+ + EE +DEA D RTIFVGN+ ++ F G++ES R RS+ +AG VD +G Q LVKKV ANK++ + +D NAYVVF E++ ALA+N EK +RVDR T+DPKR+VF+GN+ F A ED +R H +E + D VE VR++RD E+ GKGF ++LLKD + AL+L+ S R++RV+VCGKR K N +GK R KP A KR+LE P Sbjct: 780 PEVKTEENAKEDEADDERAHRTIFVGNVSLDATVDDLKKFFSSCGKVESARLRSLPVAGCAVDQNGKQNLVKKVCANKKIFVEGRDNCNAYVVFASEESIEKALALNGSEFHEKFIRVDR--KVMTKDPKRTVFVGNVAFTATEDEIRNHFEANIEKDDEDEGSNLVESVRIIRDKESHLGKGFCYVLLKDVPTATKALKLDGSKIGKRELRVSVCGKRFKSTNAEGKARSFEGRRAKPAPGAQMRVLKKRKLEGGSP 1035
BLAST of NO03G02530 vs. NCBI_GenBank
Match: XP_012197753.1 (hypothetical protein SPRG_19497 [Saprolegnia parasitica CBS 223.65] >KDO31537.1 hypothetical protein SPRG_19497 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 177.9 bits (450), Expect = 7.900e-41 Identity = 119/282 (42.20%), Postives = 160/282 (56.74%), Query Frame = 0 Query: 208 KDEEGPQEEVEEEVGQDEAKDRRTIFVGNLPTSINKKRVQSLFKEYGEIESVRFRSMALAGAKVDDHGNQQLVKKVSANKRLLSDTKDTFNAYVVFVKEKAAVAALAVNKKVVEEKHLRVDRVGNAATRDPKRSVFLGNLPFDAKEDAVRAHVAKGLEGGERD-----VEGVRLVRDSETLQGKGFGFILLKDRASVAAALRLNESTFLGRKIRVTVCGKRTKQRNDD--GKP----RVKPKHNAKRRLEAAGPRKRGVSSSSSPSKSSLGDKAKPFFEGRR 479 K E P+EE +D+ K RTIFVGN+ + ++ F G++ES R RS+ +AG VD HG Q LVKKV ANK+L + +D NAYVVF E + AALA+N EK +RVDR T DPKR+VF+GN+ F A ED +R H LE + D VE VR++RD +T GKGFG++LLKD + A AL+L+ S R++RV+VCGKR K D +P R KP A+ R+ +KR + SS KP F+G++ Sbjct: 106 KVEVAPKEE------EDDEKAPRTIFVGNVSLEATAEELKKFFSSCGKVESARLRSVPVAGCAVDQHGKQNLVKKVCANKKLFVEGRDNCNAYVVFASEDSIAAALALNGADFHEKKIRVDR--KVLTTDPKRTVFVGNMAFTATEDEIRNHFESNLEKDDEDEGSALVESVRIIRDKDTHLGKGFGYVLLKDVTTAAKALKLDGSKIGKRELRVSVCGKRFKTTATDKTARPFEGRRAKPAPGAQMRV----MKKRKLDGDSSKP----AFVKKPKFDGKK 371
BLAST of NO03G02530 vs. NCBI_GenBank
Match: XP_008609225.1 (hypothetical protein SDRG_05290 [Saprolegnia diclina VS20] >EQC37063.1 hypothetical protein SDRG_05290 [Saprolegnia diclina VS20]) HSP 1 Score: 177.6 bits (449), Expect = 1.000e-40 Identity = 114/272 (41.91%), Postives = 152/272 (55.88%), Query Frame = 0 Query: 208 KDEEGPQEEVEEEVGQDEAKDRRTIFVGNLPTSINKKRVQSLFKEYGEIESVRFRSMALAGAKVDDHGNQQLVKKVSANKRLLSDTKDTFNAYVVFVKEKAAVAALAVNKKVVEEKHLRVDRVGNAATRDPKRSVFLGNLPFDAKEDAVRAHVAKGLEGGERD-----VEGVRLVRDSETLQGKGFGFILLKDRASVAAALRLNESTFLGRKIRVTVCGKRTKQRNDDGKPRVKPKHNAKRRLEAAGPRKRGVSSSSSPSKSSLGDKAKPFF 475 K E P+EE +D+ K RTIFVGN+ + ++ F G++ES R RS+ +AG +D HG Q LVKKV ANK+L + +D NAYVVF E + AALA+N EK +RVDR T DPKR+VF+GN+ F A ED +R H LE + D VE VR++RD +T GKGFG++LLKD + A AL+L+ S R++RV+VCGKR K D R +R A G + R + + GD KP F Sbjct: 107 KVEAAPKEE------EDDEKAPRTIFVGNVSLEATAEELKKFFSSCGKVESARLRSVPVAGCAIDQHGKQNLVKKVCANKKLFVEGRDNCNAYVVFASEDSIAAALALNGAEFHEKKIRVDR--KVLTTDPKRTVFVGNMAFAATEDEIRNHFESNLEKDDEDEGSALVESVRIIRDKDTHLGKGFGYVLLKDVTTAAKALKLDGSKIGKRELRVSVCGKRFKTTATDKTAR---PFEGRRAKPAPGAQMRVMK-----KRKLDGDNGKPAF 362
BLAST of NO03G02530 vs. NCBI_GenBank
Match: OQR95989.1 (RNA-binding protein [Achlya hypogyna]) HSP 1 Score: 172.2 bits (435), Expect = 4.300e-39 Identity = 109/250 (43.60%), Postives = 140/250 (56.00%), Query Frame = 0 Query: 227 KDRRTIFVGNLPTSINKKRVQSLFKEYGEIESVRFRSMALAGAKVDDHGNQQLVKKVSANKRLLSDTKDTFNAYVVFVKEKAAVAALAVNKKVVEEKHLRVDRVGNAATRDPKRSVFLGNLPFDAKEDAVRAHVAKGLEGGERD-----VEGVRLVRDSETLQGKGFGFILLKDRASVAAALRLNESTFLGRKIRVTVCGKRTKQRNDDGKPRVKPKHNAKRRLEAAGPRKRGVSSSSSPSKSSLGDKAK 472 K RTIFVGN+ + ++ F G++ES R RS+ +AG VD HG Q LVKKV ANK+L + +D NAYVVF E++ ALA+N EK LRVDR T D KR+VF+GN+ F A ED +R H +E + D VE VRL+RD +T GKGFG++LLKD + AL+LN S R++RV+VCGKR K D PR +R A G + R V S KAK Sbjct: 123 KAPRTIFVGNVSLEATAEELKKFFSSCGKVESARLRSLPVAGCAVDQHGKQNLVKKVCANKKLFVEGRDNCNAYVVFASEESIEKALALNGAEFHEKKLRVDR--KVPTIDAKRTVFVGNVAFTATEDDLRRHFEANIEKDDEDEGSALVESVRLIRDKDTHLGKGFGYVLLKDVPTATKALKLNGSKIGKRELRVSVCGKRFKSTAADKTPRT---FEGRRAKPAPGAQMRVVKKRKLEEASVGAKKAK 367
BLAST of NO03G02530 vs. NCBI_GenBank
Match: XP_009833185.1 (hypothetical protein H257_08820 [Aphanomyces astaci] >ETV77398.1 hypothetical protein H257_08820 [Aphanomyces astaci]) HSP 1 Score: 169.1 bits (427), Expect = 3.700e-38 Identity = 111/255 (43.53%), Postives = 147/255 (57.65%), Query Frame = 0 Query: 225 EAKDRRTIFVGNLPTSINKKRVQSLFKEYGEIESVRFRSMALAGAKVDDHGNQQLVKKVSANKRLLSDTKDTFNAYVVFVKEKAAVAALAVNKKVVEEKHLRVDRVGNAATRDPKRSVFLGNLPFDAKEDAVRAHVAKGL--EGGERDVEGVRLVRDSETLQGKGFGFILLKDRASVAAALRLNESTFLGRKIRVTVCGKRTKQRNDDGKPRVK---PKHNAKRRLEAAGPRKRGVSSSSSPSKSSLGDKAKPFF 475 + KD RTIFVGN+ V+ F G++ESVR RS+ +AG KVD +G Q LVKKV NK+L +D+ NAYVVF + + AAL +N K LRVDR A + D KRSVF+GNL F+A +D VR+H K L + VE VR++RD T GKGFG++L KD ++ A AL L+ S R++RVTVCGKR K + D KP +K + + +L RK + +P G K KP F Sbjct: 233 DVKDPRTIFVGNVSLEATAADVKKFFASCGKVESVRLRSVPVAGCKVDQNGKQNLVKKVCVNKKLFVQGRDSCNAYVVFATDASVDAALKLNGSEFFNKVLRVDR--KAVSMDAKRSVFVGNLAFNATDDDVRSHFDKILREDADTAAVESVRIIRDKVTHLGKGFGYVLFKDLSTAAKALSLHGSKMGKRELRVTVCGKRFKNTHGDKKPELKFEGRRAHPGAQLRLLKKRKAEEPADGAPPSKLPGQK-KPGF 484
BLAST of NO03G02530 vs. NCBI_GenBank
Match: XP_008874873.1 (hypothetical protein H310_10310 [Aphanomyces invadans] >ETV96610.1 hypothetical protein H310_10310 [Aphanomyces invadans]) HSP 1 Score: 168.7 bits (426), Expect = 4.800e-38 Identity = 112/262 (42.75%), Postives = 150/262 (57.25%), Query Frame = 0 Query: 209 DEEGPQEEVEEEVGQDEAKDRRTIFVGNLPTSINKKRVQSLFKEYGEIESVRFRSMALAGAKVDDHGNQQLVKKVSANKRLLSDTKDTFNAYVVFVKEKAAVAALAVNKKVVEEKHLRVDRVGNAATRDPKRSVFLGNLPFDAKEDAVRAHVAKGL--EGGERDVEGVRLVRDSETLQGKGFGFILLKDRASVAAALRLNESTFLGRKIRVTVCGKRTKQRNDDGKPRVKPKHNAKR---RLEAAGPRKRGVSSSSSPSKSS 466 DE ++ G + KD RTIFVGN+ ++ F G+++SVR RS+ +AG KVD +G Q LVKKV NK+L + +D+ NAYVVFV E + AAL +N +K LRVDR + D KR+VF+GNL F A +D VR H K L + VE VR++RD T GKGFG++L KD ++ A AL L+ES R+IRVTVCGKR K + P +K + R +L RK G + + PSK S Sbjct: 160 DETASTTAKGDDDGSVDEKDVRTIFVGNVSLEATPNDLKKHFTPCGKVKSVRLRSVPVAGCKVDQNGKQNLVKKVCTNKKLFVEGRDSCNAYVVFVDESSVDAALQLNGSEFFKKCLRVDR--KNVSMDAKRTVFVGNLAFTATDDDVRNHFEKALREDADTPAVESVRIIRDKSTHLGKGFGYVLFKDVSTAAKALSLHESKMGKREIRVTVCGKRFKNTGGEKAPELKFEGRRARPGAQLRMLKKRKAGELTDAPPSKKS 419
BLAST of NO03G02530 vs. NCBI_GenBank
Match: XP_002180429.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47837.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 162.9 bits (411), Expect = 2.600e-36 Identity = 107/264 (40.53%), Postives = 155/264 (58.71%), Query Frame = 0 Query: 211 EGPQEEVEEEVGQDEAKDRRTIFVGNLPTSINKKRVQSLFKEYGEIESVRFRSMALAGAKV--DDHGNQQLVKKVSAN-KRLLSDTKDTFNAYVVFVKEKAAVAALAVNKKVVEE------KHLRVDRVGNAATRDPKRSVFLGNLPFDAKEDAVRAHVAKGLEGGERDVEGVRLVRDSETLQGKGFGFILLKDRASVAAAL-RLNESTFLGRKIRVTVCGKRTKQRNDDGKPRVKPKHNAKRRLEAAGPRKRGVSSSSSPSKS 465 EGP VE+ + + + RT+FVGNLPT N+K + LFK+ G++ES R RS+A+ G K+ ++ GNQ+LVKKV AN ++ + K + YVVFV + A AL +N V++ + +RVD A D RS+F+GNLP+ A ED++ H +G D++GVR+VRD ET Q KGFG++L D++ V AL R++ S + R++RV VCG+R K + D PK N KR E R S+ SP+ S Sbjct: 75 EGP--TVEKPSEESKQAEERTVFVGNLPTQYNRKSLAKLFKDCGKVESSRIRSLAVTGVKLPQENAGNQKLVKKVCANTSQVDTKAKSSVQGYVVFVNKDAIEKALVLNNTEVKDERTGTTRRIRVDHAN--AEYDAARSIFVGNLPYTADEDSLAEHFCEGCGLNVDDIQGVRIVRDKETFQCKGFGYVLFSDQSMVTLALQRMSGSLYAKRELRVMVCGRRFKGKKGD----AMPKENKKRSFEG-----RRASAPVSPAAS 325
BLAST of NO03G02530 vs. NCBI_GenBank
Match: XP_024575257.1 (rna recognition motif-containing family protein [Plasmopara halstedii] >CEG38888.1 rna recognition motif-containing family protein [Plasmopara halstedii]) HSP 1 Score: 161.8 bits (408), Expect = 5.900e-36 Identity = 100/232 (43.10%), Postives = 139/232 (59.91%), Query Frame = 0 Query: 224 DEAKDRRTIFVGNLPTSINKKRVQSLFKEYGEIESVRFRSMALAGAKVDDHGNQQLVKKVSANKRLLSDTKDTFNAYVVFVKEKAAVAALAVNKKVVEEKHLRVDRVGNAATRDPKRSVFLGNLPFDAKEDAVRAHVAKGLEGGE--RDVEGVRLVRDSETLQGKGFGFILLKDRASVAAALRLNESTFLGRKIRVTVCGKRTKQRNDDGKPRVKPKHNAKRRLEAAGPRKR 454 D+ K RRTIFVGN+ +K ++S F G++E+VR R + +AG VD+ GNQ+L+ KV ANK++L+ KD NAYV F +EK+ AAL +N + K +RVDR + D +RSVF+GN+PF ++ + K L+ E ++ VRL+RD E+ GKGFG++LLK A VA L L R++RV VCGKR K N G+ K KH R +AG R R Sbjct: 137 DDPKARRTIFVGNVSLDATQKDIKSHFSGCGKVENVRLRHLPIAGCAVDEAGNQKLMMKVCANKKILTTAKDNCNAYVTFAEEKSVEAALKLNGSTLANKKIRVDR--SDPVIDARRSVFIGNVPFKCTDEQMLQFFLKRLKTDEEPEPIDNVRLIRDRESGLGKGFGYLLLKTPALVAKTLTLRNLKMESRELRVQVCGKRFK--NLRGEETAKEKHEGLR--ASAGARAR 362 The following BLAST results are available for this feature:
BLAST of NO03G02530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G02530 ID=NO03G02530|Name=NO03G02530|organism=Nannochloropsis oceanica|type=gene|length=3592bpback to top protein sequence of NO03G02530.1 >NO03G02530.1-protein ID=NO03G02530.1-protein|Name=NO03G02530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=523bpback to top Synonyms
Publications
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