NO03G02410, NO03G02410 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G02410 vs. NCBI_GenBank
Match: EWM29674.1 (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 750.0 bits (1935), Expect = 9.200e-213 Identity = 561/616 (91.07%), Postives = 583/616 (94.64%), Query Frame = 0 Query: 1 MQRTVPQVPATPPTVMDDDSAFESFSCPITGSLMEDPVMTIGDGHTYERYAIEEWFRRNHRTSPLTGAPLLNLSLVGNITLRNAIEEYRASIDKLQSPGRVTSPGEEKRRALASALDAREMRMGEIRRVVPKESDMMDMGVIESEEDREDIGYWLRTRTMLCHDVVTEYVELLRSEGASSMSFLRDADYSRRELIDLGVRVPHVASLHRIVDEYSGRETAGMGSSPSGREEGPVTPDAAGATALASALRTVVSNATVDRNHPLVNALNRCGLRLNMDNGPLTTFMLLVKALKMVQGSAAVATAGLEVMRTLGRDEAHRRAFGEVGACEVVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGNNRELKRALATAGATRAIIGSMRSWPIDPDVLKQCCWAILTLAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIKTSFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFAPGLDGVVLAVRNFGADRDVAEQALGALRTLAVDDENARSFGELGACDVVTTAMRAHPLVAGIQVQSCGSVINLCGN 617 MQR+VP VP TPP+ M+DD+AFESFSCPITGSLMEDPVMT+GDGHTYERYAIEEWFRRNHRTSPLTGAPLLNLSLVGNITLRNAIEEYRASIDKLQSPGR+TSPG+EKR ALA ALDARE+RMGEIR V K D M VIESEEDREDI +WLRTRTML H+ V EYVELL EGA+SMSFLRDADYSRRELIDLGVRVPHVASLHRIVDEY GRE +G SPSGREEGPVTPDAAGATALASALRTVVSNATVDRNHPLVNALNRCGLRL+MDNGP+T+FMLLVKALKMVQGSAA+ATAGLEVMRTLGRDE HRRAFGEVGACEVVV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GNNRELKRALA+AGATRAI+ SMR WP DPDVLKQCCWAILTLAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIKTSFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFAPGLDGVVLAVRNFGADRDVAEQALGALRTLAVDDENARSFGELGAC+VV +AMRAHP +AGIQVQSCGS+INLCGN Sbjct: 1 MQRSVPHVPVTPPSAMEDDAAFESFSCPITGSLMEDPVMTVGDGHTYERYAIEEWFRRNHRTSPLTGAPLLNLSLVGNITLRNAIEEYRASIDKLQSPGRITSPGKEKRLALAKALDAREVRMGEIRLVSQKLEDDM---VIESEEDREDICFWLRTRTMLSHEAVVEYVELLAREGATSMSFLRDADYSRRELIDLGVRVPHVASLHRIVDEYCGREMGSIGGSPSGREEGPVTPDAAGATALASALRTVVSNATVDRNHPLVNALNRCGLRLSMDNGPITSFMLLVKALKMVQGSAAIATAGLEVMRTLGRDEGHRRAFGEVGACEVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNRELKRALASAGATRAIMESMREWPSDPDVLKQCCWAILTLAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIKTSFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFAPGLDGVVLAVRNFGADRDVAEQALGALRTLAVDDENARSFGELGACEVVCSAMRAHPSIAGIQVQSCGSIINLCGN 613
BLAST of NO03G02410 vs. NCBI_GenBank
Match: OAE19674.1 (hypothetical protein AXG93_1847s1370 [Marchantia polymorpha subsp. ruderalis] >PTQ36360.1 hypothetical protein MARPO_0064s0045 [Marchantia polymorpha]) HSP 1 Score: 84.0 bits (206), Expect = 2.800e-12 Identity = 46/92 (50.00%), Postives = 54/92 (58.70%), Query Frame = 0 Query: 24 SFSCPITGSLMEDPVMTIGDGHTYERYAIEEWFRRNHRTSPLTGAPLLNLSLVGNITLRNAIEEY---------RASIDKLQSPGRVTSPGE 107 SF CPITG LM DPVM + G TYER AI EWF R H T P TG L +L LV NI+LR AI E+ +IDK++ G V+ E Sbjct: 253 SFICPITGQLMRDPVMLVEAGFTYEREAICEWFERGHNTCPDTGEALESLELVPNISLRQAITEFVERATRKSITMAIDKIRESGDVSEVEE 344
BLAST of NO03G02410 vs. NCBI_GenBank
Match: XP_005787149.1 (hypothetical protein EMIHUDRAFT_111102 [Emiliania huxleyi CCMP1516] >EOD34720.1 hypothetical protein EMIHUDRAFT_111102 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 79.3 bits (194), Expect = 7.000e-11 Identity = 42/81 (51.85%), Postives = 53/81 (65.43%), Query Frame = 0 Query: 10 ATPPTVMDDDSAFESFSCPITGSLMEDPVMTIGDGHTYERYAIEEWFRRNHRTSPLTGAPLLNLSLVGNITLRNAIEEYRA 91 A PP+ D E+F CPIT +LM+DPV+ + DG TYER AIE W + H TSPLTGA L + L+ N +R+ I EYRA Sbjct: 110 AAPPSTRPSDIP-EAFLCPITFALMDDPVVMM-DGMTYERRAIERWLSKGHTTSPLTGAELQSTVLIPNNLVRSQIREYRA 188
BLAST of NO03G02410 vs. NCBI_GenBank
Match: XP_005789681.1 (hypothetical protein EMIHUDRAFT_70556 [Emiliania huxleyi CCMP1516] >EOD37252.1 hypothetical protein EMIHUDRAFT_70556 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 79.3 bits (194), Expect = 7.000e-11 Identity = 42/81 (51.85%), Postives = 53/81 (65.43%), Query Frame = 0 Query: 10 ATPPTVMDDDSAFESFSCPITGSLMEDPVMTIGDGHTYERYAIEEWFRRNHRTSPLTGAPLLNLSLVGNITLRNAIEEYRA 91 A PP+ D E+F CPIT +LM+DPV+ + DG TYER AIE W + H TSPLTGA L + L+ N +R+ I EYRA Sbjct: 23 AAPPSTRPSDIP-EAFLCPITFALMDDPVVMM-DGMTYERRAIERWLSKGHTTSPLTGAELQSTVLIPNNLVRSQIREYRA 101
BLAST of NO03G02410 vs. NCBI_GenBank
Match: EKD44842.1 (hypothetical protein ACD_70C00208G0002 [uncultured bacterium] >OGT26646.1 hypothetical protein A3B71_03230 [Gammaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_42_43] >OGT28343.1 hypothetical protein A2624_04300 [Gammaproteobacteria bacterium RIFCSPHIGHO2_01_FULL_42_8] >OGT53047.1 hypothetical protein A3E54_08295 [Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_41_25] >OGT61179.1 hypothetical protein A3I77_07400 [Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_42_14] >OGT87106.1 hypothetical protein A3G86_01120 [Gammaproteobacteria bacterium RIFCSPLOWO2_12_FULL_42_18]) HSP 1 Score: 77.8 bits (190), Expect = 2.000e-10 Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 0 Query: 24 SFSCPITGSLMEDPVMTIGDGHTYERYAIEEWFRRNHRTSPLTGAPLLNLSLVGNITLRNAIEEYRASIDKLQSPGRVTSP 105 +F CPIT +MEDPVM + DGHTYER AI+ W + N + SP+TGA L ++ N TL+ AI E+R D +P ++TSP Sbjct: 10 AFICPITFEIMEDPVMCV-DGHTYERAAIDRWLKEN-KNSPMTGARLSSIWFTTNFTLKKAIAEWREENDIKPTP-KITSP 87
BLAST of NO03G02410 vs. NCBI_GenBank
Match: CEP03144.1 (hypothetical protein PBRA_009362 [Plasmodiophora brassicae]) HSP 1 Score: 77.4 bits (189), Expect = 2.600e-10 Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = 0 Query: 24 SFSCPITGSLMEDPVMTIGDGHTYERYAIEEWFRRNHRTSPLTGAPLLNLSLVGNITLRNAIEEYRASI 93 S+ CPITG LM+DPVM DG+TYER AI EW R+ H TSP+T APL LV N LR+AI++YR S+ Sbjct: 8 SYVCPITGRLMDDPVMD-PDGNTYERAAITEWLRQ-HPTSPITRAPLDAAVLVPNRALRDAIDDYRRSL 74
BLAST of NO03G02410 vs. NCBI_GenBank
Match: CBJ29474.1 (WD repeat, SAM and U-box domain containing 1 [Ectocarpus siliculosus]) HSP 1 Score: 77.0 bits (188), Expect = 3.500e-10 Identity = 40/78 (51.28%), Postives = 50/78 (64.10%), Query Frame = 0 Query: 13 PTVMDDDSAFESFSCPITGSLMEDPVMTIGDGHTYERYAIEEWFRRNHRTSPLTGAPLLNLSLVGNITLRNAIEEYRA 91 P ++ + + FSCPIT LM DPV+ DGHTY+R AIE W RNH TSP TG P+ LSLV N+ LR I++ A Sbjct: 5 PLLVRGSALRDEFSCPITRELMRDPVIA-ADGHTYDREAIEMWL-RNHDTSPKTGQPMEQLSLVPNLNLRRLIKDLLA 80
BLAST of NO03G02410 vs. NCBI_GenBank
Match: XP_005834423.1 (hypothetical protein GUITHDRAFT_53498, partial [Guillardia theta CCMP2712] >EKX47443.1 hypothetical protein GUITHDRAFT_53498, partial [Guillardia theta CCMP2712]) HSP 1 Score: 76.6 bits (187), Expect = 4.500e-10 Identity = 40/64 (62.50%), Postives = 49/64 (76.56%), Query Frame = 0 Query: 25 FSCPITGSLMEDPVMTIGDGHTYERYAIEEWFRRNHRTSPLTGAPLLNLSLVGNITLRNAIEEY 89 FSCPIT +M DPV T DGHTYER +IE WFR+N +SPLTGA L + SL+ NI L+NAI+E+ Sbjct: 1 FSCPITMEVMSDPV-TSCDGHTYERSSIETWFRQN-ASSPLTGAVLGSKSLLPNIALKNAIQEW 62
BLAST of NO03G02410 vs. NCBI_GenBank
Match: XP_005824039.1 (hypothetical protein GUITHDRAFT_78485, partial [Guillardia theta CCMP2712] >EKX37059.1 hypothetical protein GUITHDRAFT_78485, partial [Guillardia theta CCMP2712]) HSP 1 Score: 76.3 bits (186), Expect = 5.900e-10 Identity = 40/72 (55.56%), Postives = 48/72 (66.67%), Query Frame = 0 Query: 17 DDDSAFESFSCPITGSLMEDPVMTIGDGHTYERYAIEEWFRRNHRTSPLTGAPLLNLSLVGNITLRNAIEEY 89 + A SF CPI+ LM DPV T DGHTYER IE W ++ HRTSPLTG+ L LV N+ LRNAI+E+ Sbjct: 3 EQQQALPSFFCPISMQLMTDPVNTC-DGHTYERSFIETWLQQ-HRTSPLTGSRLPRRDLVPNLALRNAIQEW 72
BLAST of NO03G02410 vs. NCBI_GenBank
Match: CEM39817.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 75.9 bits (185), Expect = 7.700e-10 Identity = 33/62 (53.23%), Postives = 48/62 (77.42%), Query Frame = 0 Query: 26 SCPITGSLMEDPVMTIGDGHTYERYAIEEWFRRNHRTSPLTGAPLLNLSLVGNITLRNAIEE 88 +CP++GS+MEDPV+T+ DGH+YER I +WF + H TSP+TG PL + +L+ N +LR I+E Sbjct: 57 TCPVSGSVMEDPVVTV-DGHSYERSNITQWFDQGHVTSPVTGLPLPSTTLIPNHSLRRTIDE 117 The following BLAST results are available for this feature:
BLAST of NO03G02410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G02410 ID=NO03G02410|Name=NO03G02410|organism=Nannochloropsis oceanica|type=gene|length=6407bpback to top protein sequence of NO03G02410.1 >NO03G02410.1-protein ID=NO03G02410.1-protein|Name=NO03G02410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=952bpback to top Synonyms
Publications
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