NO03G02280, NO03G02280 (gene) Nannochloropsis oceanica

Overview
NameNO03G02280
Unique NameNO03G02280
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1369
Alignment locationchr3:666464..667832 -

Link to JBrowse

Properties
Property NameValue
DescriptionPoly-gamma-glutamate biosynthesis protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:666464..667832 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019079Capsule_synth_CapA
Homology
BLAST of NO03G02280 vs. NCBI_GenBank
Match: WP_055470790.1 (CapA family protein [Streptomyces pathocidini])

HSP 1 Score: 314.7 bits (805), Expect = 4.200e-82
Identity = 172/372 (46.24%), Postives = 220/372 (59.14%), Query Frame = 0
Query:   28 LRLALAGDTMLGRCVAEAILQARDPSDAPKDTERTKMPFPPGGSAFGTPPRKPKEDEAVVFAPEVVALAHEADLFFLNLECCITNHHQRWPNPHKPFFFRAPFCSVNELKILGVDAVTLANNHALDYDVPGLEDTLKTLDEAGIPYTGAGRNLAEARQPVILEHEGMRIGIIGVTDHPLEFDAKADRPGVCYVDLQRRSDIDTPAAAGEGGGGSMGPLVPTWLGDKIRFLKEVEHCDVVIVSPHWGPNMCLDPLLYVRESAKILHNMGADLIAGHSAHCFQGASTELRCLYDIGDFVDDYATDPYARNDLGLFFFVLFDLDTKEPWRVEAVPLKLDFCLTRLAMGQEYDFIVQRFQKFSAKYGTHVWEDKQR 400
            ++LALAGDTMLGR VA+ I                  P P                 A +FAPEVVA A EADL  LNLECC+++    WP+P KPFFFRAP  +   L+ LGV  VTLANNHALDY V  L DT++ L +AGI + GAG + A AR+PV+LEH G+R+G++ V DHP +F A AD+PG  Y DL+            EG         P WL ++I  L      D+ +V+PHWGPNM   P+ +VR +A++    GA L+AGHSAH FQG    +  L+D+GDFVDDYATDP  RNDLGL F V FD +   P R+EAVPL LD+C T LA  ++  +I  RF++    +GT V E+  R
Sbjct:    1 MKLALAGDTMLGRRVADEI----------------NSPVP-----------------AELFAPEVVAAAREADLLLLNLECCVSSRGAPWPDPFKPFFFRAPPRATVFLQELGVTCVTLANNHALDYGVEALADTIRHLSDAGIAWVGAGADEAAARRPVVLEHGGVRVGVVAVADHPPDFAAAADQPGTAYADLR------------EG--------TPGWLREEIGSL----DADITLVAPHWGPNMVDHPVPHVRRAAEVFRASGATLVAGHSAHVFQGVDDHV--LFDLGDFVDDYATDPRLRNDLGLLFLVTFD-EAHRPTRLEAVPLALDYCRTTLAGPRDRRWITARFREACGAFGTEVAEESGR 312          
BLAST of NO03G02280 vs. NCBI_GenBank
Match: WP_018385731.1 (CapA family protein [Streptomyces vitaminophilus])

HSP 1 Score: 307.0 bits (785), Expect = 8.800e-80
Identity = 170/372 (45.70%), Postives = 212/372 (56.99%), Query Frame = 0
Query:   28 LRLALAGDTMLGRCVAEAILQARDPSDAPKDTERTKMPFPPGGSAFGTPPRKPKEDEAVVFAPEVVALAHEADLFFLNLECCITNHHQRWPNPHKPFFFRAPFCSVNELKILGVDAVTLANNHALDYDVPGLEDTLKTLDEAGIPYTGAGRNLAEARQPVILEHEGMRIGIIGVTDHPLEFDAKADRPGVCYVDLQRRSDIDTPAAAGEGGGGSMGPLVPTWLGDKIRFLKEVEHCDVVIVSPHWGPNMCLDPLLYVRESAKILHNMGADLIAGHSAHCFQGASTELRCLYDIGDFVDDYATDPYARNDLGLFFFVLFDLDTKEPWRVEAVPLKLDFCLTRLAMGQEYDFIVQRFQKFSAKYGTHVWEDKQR 400
            +R+ALAGDTMLGR VA+ +  A                          PP         +FA EVVA   EADLF LNLEC +++  + WP+P KPFFFRAP  +V  L+ LGVD VTLANNHALDY V  L DT++ L  AGI + GAG +LA AR P +LE  G+R+G++GVTDHP ++ A   RPGV Y DL          A G          VP WL + I  L      D+ +V PHWGPNM   P+ +VR +A+     GA L+AGHSAH F G     R LYD+GDF+DDYA  P  RNDLGL F V F  +   P R+EA+PL LD+C TRLA G  Y ++  RF++  A  G+ V E   R
Sbjct:    1 MRIALAGDTMLGRGVADRLATA--------------------------PPTS-------LFADEVVAAGREADLFLLNLECAVSDRGEPWPDPAKPFFFRAPPVAVEALRHLGVDCVTLANNHALDYGVEALADTVRHLSAAGIAWVGAGDDLARARAPAVLERAGVRVGVVGVTDHPSDYAAGPGRPGVAYADL----------ANG----------VPDWLPETIEGL----DTDITLVFPHWGPNMTAGPVDHVRSAARAFLETGATLVAGHSAHVFHGVGD--RVLYDLGDFLDDYAVHPRLRNDLGLLFLVTF--EGPRPTRLEALPLALDYCHTRLATGARYAWVATRFREACAALGSEVTESAGR 311          
BLAST of NO03G02280 vs. NCBI_GenBank
Match: WP_106675996.1 (CapA family protein [Streptosporangium nondiastaticum] >PSJ28379.1 poly-gamma-glutamate biosynthesis protein [Streptosporangium nondiastaticum])

HSP 1 Score: 303.1 bits (775), Expect = 1.300e-78
Identity = 172/368 (46.74%), Postives = 216/368 (58.70%), Query Frame = 0
Query:   28 LRLALAGDTMLGRCVAEAILQARDPSDAPKDTERTKMPFPPGGSAFGTPPRKPKEDEAVVFAPEVVALAHEADLFFLNLECCITNHHQRWPNPHKPFFFRAPFCSVNELKILGVDAVTLANNHALDYDVPGLEDTLKTLDEAGIPYTGAGRNLAEARQPVILEHEGMRIGIIGVTDHPLEFDAKADRPGVCYVDLQRRSDIDTPAAAGEGGGGSMGPLVPTWLGDKIRFLKEVEHCDVVIVSPHWGPNMCLDPLLYVRESAKILHNMGADLIAGHSAHCFQGASTELRCLYDIGDFVDDYATDPYARNDLGLFFFVLFDLDTKEPWRVEAVPLKLDFCLTRLAMGQEYDFIVQRFQKFSAKYGTHVWE 396
            ++LALAGDTMLGR VA     AR  +D P+                             +FA  VVA+AHEAD F LNLEC ++   +RW +P KPFFFRAP  +V  L+ LGV  V LANNHALDY    L DT++ L +AGI +TGAGR+   ARQP ++E  G+R+G++G+TDHP +F A  DRPGV + +L             E G        P WL   +R + ++   DV +V+PHWGPNM   P  Y+R +A+     GA L+AGHSAH F G +   R LYD+GDFVDDYATD   RNDLGL F V F  D   P RVEAVPL LDFC TRLA   E  +I +RF++  A +GT V E
Sbjct:    1 MKLALAGDTMLGREVA-----ARLATDPPES----------------------------LFADGVVAVAHEADAFVLNLECAVSARGERWRDPFKPFFFRAPPVAVRALQHLGVTCVNLANNHALDYGPEALLDTVRHLADAGIAWTGAGRDEEAARQPAVVERGGLRLGVLGITDHPRDFAAGPDRPGVAHAEL-------------ESG-------APVWL---LRTITDLA-ADVTLVTPHWGPNMTRGPAAYIRRAAQEFLAAGAALVAGHSAHVFHGVAD--RVLYDLGDFVDDYATDDDLRNDLGLLFLVTF--DGPRPSRVEAVPLALDFCRTRLADAAESAWIARRFRQACAAFGTEVTE 307          
BLAST of NO03G02280 vs. NCBI_GenBank
Match: WP_058043162.1 (CapA family protein [Streptomyces sp. MBT76])

HSP 1 Score: 302.0 bits (772), Expect = 2.800e-78
Identity = 171/372 (45.97%), Postives = 214/372 (57.53%), Query Frame = 0
Query:   28 LRLALAGDTMLGRCVAEAILQARDPSDAPKDTERTKMPFPPGGSAFGTPPRKPKEDEAVVFAPEVVALAHEADLFFLNLECCITNHHQRWPNPHKPFFFRAPFCSVNELKILGVDAVTLANNHALDYDVPGLEDTLKTLDEAGIPYTGAGRNLAEARQPVILEHEGMRIGIIGVTDHPLEFDAKADRPGVCYVDLQRRSDIDTPAAAGEGGGGSMGPLVPTWLGDKIRFLKEVEHCDVVIVSPHWGPNMCLDPLLYVRESAKILHNMGADLIAGHSAHCFQGASTELRCLYDIGDFVDDYATDPYARNDLGLFFFVLFDLDTKEPWRVEAVPLKLDFCLTRLAMGQEYDFIVQRFQKFSAKYGTHVWEDKQR 400
            ++LALAGDTMLGR VA  +  A DP ++                               +FA EVVA+AHEAD+F LNLEC ++   +RW +P KPFFFRAP  +   L+ LGVD V LANNHALDY    L DT++ L +AGI + GAGR+   AR+P +L+  G+R+G++GVTDHP +F A  DRPGV Y           P  AG           P WL   +  L      D+ +V+PHWGPNM   P  Y+R +A+     GA L+AGHSAH F G     R LYD+GDF+DDYATD   RNDLGL F V F  D   P RVEAVPL LDFC TRLA   E  +I +RF++  A +GT V E+  R
Sbjct:    1 MKLALAGDTMLGREVAGRL--ATDPPES-------------------------------LFADEVVAVAHEADVFVLNLECAVSARGERWRDPFKPFFFRAPPVATETLRHLGVDCVNLANNHALDYGPEALLDTVRHLADAGIAWAGAGRDEEAARRPAVLDRCGLRLGVVGVTDHPHDFAAGPDRPGVAY----------APLDAG----------APAWLLRTVTAL----GTDITLVTPHWGPNMTSGPADYIRRAAQQFLAAGATLVAGHSAHVFHGVQD--RVLYDLGDFIDDYATDDRLRNDLGLLFLVSF--DGARPVRVEAVPLALDFCRTRLADEAETGWITRRFRRACAAFGTDVAEEDGR 311          
BLAST of NO03G02280 vs. NCBI_GenBank
Match: WP_030368578.1 (CapA family protein [Streptomyces roseoverticillatus])

HSP 1 Score: 299.7 bits (766), Expect = 1.400e-77
Identity = 173/368 (47.01%), Postives = 212/368 (57.61%), Query Frame = 0
Query:   28 LRLALAGDTMLGRCVAEAILQARDPSDAPKDTERTKMPFPPGGSAFGTPPRKPKEDEAVVFAPEVVALAHEADLFFLNLECCITNHHQRWPNPHKPFFFRAPFCSVNELKILGVDAVTLANNHALDYDVPGLEDTLKTLDEAGIPYTGAGRNLAEARQPVILEHEGMRIGIIGVTDHPLEFDAKADRPGVCYVDLQRRSDIDTPAAAGEGGGGSMGPLVPTWLGDKIRFLKEVEHCDVVIVSPHWGPNMCLDPLLYVRESAKILHNMGADLIAGHSAHCFQGASTELRCLYDIGDFVDDYATDPYARNDLGLFFFVLFDLDTKEPWRVEAVPLKLDFCLTRLAMGQEYDFIVQRFQKFSAKYGTHVWE 396
            ++LALAGDTMLGR VA  +  A DP ++                               +FA  VVA+AHEAD F LNLEC ++   +R  +P KPFFFRAP  +V  L+ LGV  V LANNHALDY    L DT++ L +AGI +TGAGR+   ARQP ++E  G+R+G+IGVTDHP +F A  DRPGV + DL+          AG           P WL   +  L      DV +V+PHWGPNM   P  Y+R +A+     GA L+AGHSAH F G +   R LYD+GDFVDDYATD   RNDLGL F V F  D   P RVEAVPL LDFC TRLA   E  +I  RF++  A +GT V E
Sbjct:    1 MKLALAGDTMLGREVAGRL--ATDPPES-------------------------------LFADGVVAVAHEADAFVLNLECAVSARGERRRDPFKPFFFRAPPVAVRALQHLGVTCVNLANNHALDYGPEALLDTVRHLADAGIAWTGAGRDEEAARQPAVVERGGLRLGVIGVTDHPRDFAAGPDRPGVAHADLE----------AG----------APVWLLRTVTGLA----TDVTLVTPHWGPNMTRGPAAYIRRAAQEFLAAGATLVAGHSAHVFHGVAD--RVLYDLGDFVDDYATDDDLRNDLGLLFLVTF--DGTRPARVEAVPLALDFCRTRLADAAEAAWIAHRFRRACAAFGTEVTE 307          
BLAST of NO03G02280 vs. NCBI_GenBank
Match: WP_018556918.1 (CapA family protein [Streptomyces sp. BoleA5])

HSP 1 Score: 295.8 bits (756), Expect = 2.000e-76
Identity = 169/377 (44.83%), Postives = 213/377 (56.50%), Query Frame = 0
Query:   28 LRLALAGDTMLGRCVAEAILQARDPSDAPKDTERTKMPFPPGGSAFGTPPRKPKEDEAVVFAPEVVALAHEADLFFLNLECCITNHHQRWPNPHKPFFFRAPFCSVNELKILGVDAVTLANNHALDYDVPGLEDTLKTLDEAGIPYTGAGRNLAEARQPVILEHEGM-----RIGIIGVTDHPLEFDAKADRPGVCYVDLQRRSDIDTPAAAGEGGGGSMGPLVPTWLGDKIRFLKEVEHCDVVIVSPHWGPNMCLDPLLYVRESAKILHNMGADLIAGHSAHCFQGASTELRCLYDIGDFVDDYATDPYARNDLGLFFFVLFDLDTKEPWRVEAVPLKLDFCLTRLAMGQEYDFIVQRFQKFSAKYGTHVWEDKQR 400
            ++L LAGDTMLGR VA  + +A  P++A                               +F+  VVA+A EADLF LNLEC I++  +RWP+P KPFFFRAP  +V  L  LGV  V LANNHALDY    L DTL+ L  AGI   GAG + A AR P +L   G       +G++GVTDHP ++ A   RPGV Y DL            GEG        VP WL D +  L+       V+V+PHWGPNM   P  Y+R++A +L   GA L+AG SAH F G +  +  LYD+GDFVDDYATDP  RND GL F V FD   + P R+EAVP+ LDFC TRLA   E  +I +RF++  A +G  V E++ R
Sbjct:    1 MKLGLAGDTMLGRMVAARLAEA--PAEA-------------------------------LFSDGVVAVAREADLFVLNLECAISDRGERWPDPCKPFFFRAPPAAVRALTHLGVSCVNLANNHALDYGRTALLDTLEHLAAAGIAAVGAGPDEAAARAPAVLCGRGCGAGSPGLGVVGVTDHPAQYAAGPGRPGVAYADL------------GEG--------VPRWLTDGVASLR--ARVPAVLVTPHWGPNMTTAPARYIRDAAAVLRTAGATLVAGTSAHAFHGVADGV--LYDLGDFVDDYATDPRLRNDRGLLFLVTFDPAGRRPVRLEAVPIALDFCFTRLADRAERAWIARRFRRACAAFGHEVTEERGR 320          
BLAST of NO03G02280 vs. NCBI_GenBank
Match: WP_028060724.1 (poly-gamma-glutamate biosynthesis protein [Solirubrobacter sp. URHD0082])

HSP 1 Score: 295.0 bits (754), Expect = 3.500e-76
Identity = 170/364 (46.70%), Postives = 209/364 (57.42%), Query Frame = 0
Query:   28 LRLALAGDTMLGRCVAEAILQARDPSDAPKDTERTKMPFPPGGSAFGTPPRKPKEDEAVVFAPEVVALAHEADLFFLNLECCITNHHQRWPNPHKPFFFRAPFCSVNELKILGVDAVTLANNHALDYDVPGLEDTLKTLDEAGIPYTGAGRNLAEARQPVILEHEGMRIGIIGVTDHPLEFDAKADRPGVCYVDLQRRSDIDTPAAAGEGGGGSMGPLVPTWLGDKIRFLKEVEHCDVVIVSPHWGPNMCLDPLLYVRESAKILHNMGADLIAGHSAHCFQGASTELRCLYDIGDFVDDYATDPYARNDLGLFFFVLFDLDTKEPWRVEAVPLKLDFCLTRLAMGQEYDFIVQRFQKFSAKYGT 392
            +R+ALAGDTMLGR VAEAI ++                        G  P           APEVVA A EAD+F LNLECCI++  +RWP+P KPFFFRAP  +   L  +GV  VTLANNHALDY    L DTL  L  AGI + GAG + A AR P +L   GMR+ ++G +DHP +F A  DRPG+ Y DL  RSD           GG        WL + +   +     D V+V PHWGPNM L P   +R +A+ +   GA L+AGHSAH   GA  E   LYD+GDFVDDYA DP  RNDLGL F V  DL    P R+EAVPLK++ CLTR+A G + ++I +RF    A+ GT
Sbjct:    1 MRVALAGDTMLGRGVAEAIARS------------------------GRAP----------VAPEVVAAAAEADIFILNLECCISDRGRRWPDPRKPFFFRAPPLAAELLAGMGVGCVTLANNHALDYGPEALLDTLDHLAAAGIAWAGAGPDAATARAPRLLTARGMRLAVLGASDHPEDFGAGPDRPGIAYADL--RSD---------ASGG--------WLTNAVAAAR--RDADAVLVGPHWGPNMTLGPSAAIRRAARAIVTAGATLVAGHSAHVPHGA--ERAVLYDLGDFVDDYAVDPRLRNDLGLLFLV--DLGAGGPQRLEAVPLKIERCLTRIARGDDAEWIRRRFIAACAELGT 305          
BLAST of NO03G02280 vs. NCBI_GenBank
Match: WP_089221745.1 (poly-gamma-glutamate biosynthesis protein [Streptomyces glauciniger])

HSP 1 Score: 294.3 bits (752), Expect = 5.900e-76
Identity = 171/383 (44.65%), Postives = 212/383 (55.35%), Query Frame = 0
Query:   28 LRLALAGDTMLGRCVAEAILQARDPSDAPKDTERTKMPFPPGGSAFGTPPRKPKEDEAVVFAPEVVALAHEADLFFLNLECCITNHHQRWPNPHKPFFFRAPFCSVNELKILGVDAVTLANNHALDYDVPGLEDTLKTLDEAGIPYTGAGRNLAEARQPVILEHEG-----MRIGIIGVTDHPLEFDAKADRPGVCYVDLQRRSDIDTPAAAGEGGGGSMGPLVPTWLGDKIRFLKEVEHCDVVIVSPHWGPNMCLDPLLYVRESAKILHNMGADLIAGHSAHCFQGASTELRCLYDIGDFVDDYATDPYARNDLGLFFFVLFDLDTKEPWRVEAVPLKLDFCLTRLAMGQEYDFIVQRFQKFSAKYGTHVWEDKQRRRLVFD 406
            ++L LAGDTMLGR VA  + +A                          PP         +F+ EVVA+A EADLF LNLEC I++  + WP+P KPFFFRAP  +V  L  LGV  V LANNHALDY    L DTL+ L  AGI   GAG + A AR P +L   G       +G++GVTDHP E+ A  DRPGV Y DL            GEG        VP WL D +  L+       V+V+PHWGPNM   P   +R +A  L   GA L+AG SAH F G +  +  LYD+GDFVDDYATDP  RND GL F V FD   + P R+EAVP+ LDFC TRLA   E  +I +RF++  A +G  V E++ R  + +D
Sbjct:    1 MKLGLAGDTMLGRMVAARLAEA--------------------------PPE-------ALFSDEVVAVAREADLFVLNLECAISDRGEPWPDPLKPFFFRAPPVAVRALTHLGVSCVNLANNHALDYGRTALLDTLEHLAAAGIAAVGAGPDEAAARAPAVLAGRGGPAGSPGLGVVGVTDHPAEYAAGPDRPGVAYADL------------GEG--------VPRWLTDGVASLR--TRTPAVLVTPHWGPNMTTGPARRIRAAAAALRTAGAALVAGTSAHVFHGVTDGV--LYDLGDFVDDYATDPRLRNDRGLLFLVAFDPAGRRPVRLEAVPIALDFCFTRLADRAERAWIARRFRRACAAFGHEVTEERGRLVVCWD 326          
BLAST of NO03G02280 vs. NCBI_GenBank
Match: WP_099199022.1 (CapA family protein [Streptomyces cinnamoneus] >PHQ51829.1 poly-gamma-glutamate biosynthesis protein [Streptomyces cinnamoneus] >PPT12076.1 poly-gamma-glutamate biosynthesis protein [Streptomyces cinnamoneus])

HSP 1 Score: 290.0 bits (741), Expect = 1.100e-74
Identity = 167/381 (43.83%), Postives = 202/381 (53.02%), Query Frame = 0
Query:   28 LRLALAGDTMLGRCVAEAILQARDPSDAPKDTERTKMPFPPGGSAFGTPPRKPKEDEAVVFAPEVVALAHEADLFFLNLECCITNHHQRWPNPHKPFFFRAPFCSVNELKILGVDAVTLANNHALDYDVPGLEDTLKTLDEAGIPYTGAGRNLAEARQPVILEHEGMRIGIIGVTDHPLEFDAKADRPGVCYVDLQRRSDIDTPAAAGEGGGGSMGPLVPTWLGDKIRFLKEVEHCDVVIVSPHWGPNMCLDPLLYVRESAKILHNMGADLIAGHSAHCFQGASTELRCLYDIGDFVDDYATDPYARNDLGLFFFVLFD---LDTKEPWRVEAVPLKLDFCLTRLAMGQEYDFIVQRFQKFSAKYGTHVWEDKQRRRLVFD 406
            + +ALAGDTMLGRCVAE + Q   P                                A V +  +  L   AD F LNLECC+++  + WP P KPFFFRAP  +   L  LG D VTLANNHALDY    L DT   L  AG+   GAG + A AR+  +LE    R+ ++GVTDHP +F A  DRPGV Y DL R                     VP WL D +   +     D V+V+PHWGPNM   P  +VR +A  L   GA L+AGHSAH F G +   RCL+D+GDFVDDYA DP  RNDLGL F V  D        P RVEAVPL LDFC T  A G E+++I  RF +  A++GT V    +  RLV D
Sbjct:    3 ITVALAGDTMLGRCVAERLEQDPRP--------------------------------ATVLSAALRGLVAGADAFVLNLECCVSDRGEPWPAPGKPFFFRAPPAAATVLADLGADCVTLANNHALDYGFDALADTRALLTRAGVRSVGAGPDPAAARRFALLEAGATRLAVVGVTDHPEDFAAGPDRPGVAYADLARG--------------------VPGWLADLVG--RAAAEADAVLVTPHWGPNMTSAPPPHVRHTAAALLEAGATLVAGHSAHVFHGVAD--RCLFDMGDFVDDYAVDPVLRNDLGLLFLVTLDGTGPARPRPVRVEAVPLHLDFCRTTQASGDEWEWIRDRFTRACAEFGTTV--TVRGERLVVD 325          
BLAST of NO03G02280 vs. NCBI_GenBank
Match: WP_084955287.1 (CapA family protein [Thermoactinospora rubra])

HSP 1 Score: 289.3 bits (739), Expect = 1.900e-74
Identity = 167/367 (45.50%), Postives = 207/367 (56.40%), Query Frame = 0
Query:   30 LALAGDTMLGRCVAEAILQARDPSDAPKDTERTKMPFPPGGSAFGTPPRKPKEDEAVVFAPEVVALAHEADLFFLNLECCITNHHQRWPNPHKPFFFRAPFCSVNELKILGVDAVTLANNHALDYDVPGLEDTLKTLDEAGIPYTGAGRNLAEARQPVILEHEGMRIGIIGVTDHPLEFDAKADRPGVCYVDLQRRSDIDTPAAAGEGGGGSMGPLVPTWLGDKIRFLKEVEHCDVVIVSPHWGPNMCLDPLLYVRESAKILHNMGADLIAGHSAHCFQGASTELRCLYDIGDFVDDYATDPYARNDLGLFFFVLFDLDTKEPWRVEAVPLKLDFCLTRLAMGQEYDFIVQRFQKFSAKYGTHVWED 397
            +ALAGDTMLGR VA+ +    DP++                                +F   V  +   ADL  LNLECCI+    RW    KPF FRAP  +   L  LGVD VTLANNHALDY    L DT   L  AG+   GAG +LA+AR+  +LE  G+R+G++GVTDHP EF A  DRPGV YV L+                  +G  VP WL   +  L++V   DV IV+PHWGPNM   P+ +VR++AK L   GA L+AGHSAH F G   E   LYD+GDFVDDY  DP  RNDLGL F V   LD + P R+ AVP+ LDFC TRLA G+E ++I +RF    A++GT V E+
Sbjct:    5 IALAGDTMLGRGVAQRLEDTSDPAE--------------------------------LFDEGVRDVLAGADLVLLNLECCISTRGSRWDPVGKPFHFRAPPHAAGMLARLGVDCVTLANNHALDYGYEALLDTRDHLAAAGVLSVGAGVDLAQARRAAVLEASGLRVGVLGVTDHPDEFAATDDRPGVNYVPLE------------------LG--VPEWLAKSVAELRDV--ADVAIVTPHWGPNMTARPVPHVRQAAKALLECGASLVAGHSAHVFHG--VEGPVLYDMGDFVDDYIVDPDLRNDLGLIFLV--TLDEQGPVRLRAVPIALDFCYTRLATGREAEWIRRRFAGACAEFGTQVSEE 313          
The following BLAST results are available for this feature:
BLAST of NO03G02280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_055470790.14.200e-8246.24CapA family protein [Streptomyces pathocidini][more]
WP_018385731.18.800e-8045.70CapA family protein [Streptomyces vitaminophilus][more]
WP_106675996.11.300e-7846.74CapA family protein [Streptosporangium nondiastati... [more]
WP_058043162.12.800e-7845.97CapA family protein [Streptomyces sp. MBT76][more]
WP_030368578.11.400e-7747.01CapA family protein [Streptomyces roseoverticillat... [more]
WP_018556918.12.000e-7644.83CapA family protein [Streptomyces sp. BoleA5][more]
WP_028060724.13.500e-7646.70poly-gamma-glutamate biosynthesis protein [Solirub... [more]
WP_089221745.15.900e-7644.65poly-gamma-glutamate biosynthesis protein [Strepto... [more]
WP_099199022.11.100e-7443.83CapA family protein [Streptomyces cinnamoneus] >PH... [more]
WP_084955287.11.900e-7445.50CapA family protein [Thermoactinospora rubra][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL067nonsL067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR001ncniR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR049ngnoR049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005671NSK005671Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G02280.1NO03G02280.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100112g18gene966Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G02280.1NO03G02280.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G02280 ID=NO03G02280|Name=NO03G02280|organism=Nannochloropsis oceanica|type=gene|length=1369bp
ATGGCATCTGCCACCGCCGTAAGGAACAGCAGCTCTGTCGTGCCGCCGAG
GACGCCACGCACGAGCCCAGCACGCCGGGTTTTGCGTCTAGCGTTGGCAG
GGGACACGATGCTGGGACGCTGCGTGGCGGAGGCCATTCTGCAAGCGAGG
GATCCATCCGATGCACCTAAAGATACGGAGCGCACAAAAATGCCCTTCCC
TCCCGGAGGAAGCGCATTCGGCACGCCCCCTCGCAAACCGAAAGAGGATG
AAGCCGTGGTCTTTGCGCCCGAAGTGGTGGCTTTGGCTCACGAGGCAGAT
CTCTTTTTTCTGAACCTTGAGTGTTGCATCACGAATCATCATCAACGCTG
GCCGAATCCTCACAAGCCTTTTTTTTTTCGTGCGCCGTTTTGCTCCGTGA
ACGAACTGAAGATTCTTGGTGTGGATGCCGTGACATTGGCCAACAATCAC
GCGCTAGATTACGACGTGCCGGGCCTCGAAGACACACTGAAGACGCTGGA
TGAGGCGGGCATCCCTTACACAGGTGCAGGGCGGAACTTGGCCGAGGCTC
GCCAGCCAGTGATTTTGGAGCATGAAGGTATGCGAATAGGCATCATAGGT
GTGACGGACCATCCGCTCGAGTTTGATGCGAAAGCAGACCGACCCGGGGT
GTGCTATGTGGATTTGCAGCGgtacgttttgggattgggacccatttgtt
gttccgcttaaattaagttgttgccattttgtcgcccgatcttaaatcat
ggctagatcacttttgccggtagatcgctgatccggtttctcttttcttc
tcctctcctttcctcgcagGCGCAGCGATATCGACACGCCGGCGGCTGCA
GGCGAGGGGGGCGGAGGCAGCATGGGACCCTTGGTTCCTACCTGGCTTGG
CGACAAGATCCGTTTTTTAAAGGAGGTGGAGCACTGCGACGTGGTCATAG
TGTCCCCTCACTGGGGTCCGAATATGTGCCTCGATCCTTTGCTCTATGTA
CGCGAATCAGCCAAAATCTTGCATAACATGGGCGCTGACTTGATTGCCGG
ACACAGTGCTCATTGTTTTCAAGGGGCATCGACGGAACTGCGGTGTCTTT
ACGACATAGGTGACTTTGTGGACGACTATGCGACGGATCCCTATGCCCGC
AATGATTTGGGCCTCTTTTTCTTTGTGTTGTTTGACTTAGACACGAAGGA
ACCTTGGCGGGTGGAGGCCGTTCCCTTGAAGCTCGATTTTTGTTTGACAA
GGTTGGCTATGGGACAGGAATATGACTTCATTGTACAACGTTTCCAAAAG
TTCTCGGCGAAGTATGGGACGCACGTCTGGGAAGACAAGCAACGCCGGCG
ATTGGTGTTTGATCTCTAA
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protein sequence of NO03G02280.1

>NO03G02280.1-protein ID=NO03G02280.1-protein|Name=NO03G02280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=407bp
MASATAVRNSSSVVPPRTPRTSPARRVLRLALAGDTMLGRCVAEAILQAR
DPSDAPKDTERTKMPFPPGGSAFGTPPRKPKEDEAVVFAPEVVALAHEAD
LFFLNLECCITNHHQRWPNPHKPFFFRAPFCSVNELKILGVDAVTLANNH
ALDYDVPGLEDTLKTLDEAGIPYTGAGRNLAEARQPVILEHEGMRIGIIG
VTDHPLEFDAKADRPGVCYVDLQRRSDIDTPAAAGEGGGGSMGPLVPTWL
GDKIRFLKEVEHCDVVIVSPHWGPNMCLDPLLYVRESAKILHNMGADLIA
GHSAHCFQGASTELRCLYDIGDFVDDYATDPYARNDLGLFFFVLFDLDTK
EPWRVEAVPLKLDFCLTRLAMGQEYDFIVQRFQKFSAKYGTHVWEDKQRR
RLVFDL*
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Synonyms
Publications