NO03G02250, NO03G02250 (gene) Nannochloropsis oceanica

Overview
NameNO03G02250
Unique NameNO03G02250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2679
Alignment locationchr3:660535..663213 -

Link to JBrowse

Properties
Property NameValue
DescriptionAll-trans-retinol 13,14-reductase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:660535..663213 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO03G02250 vs. NCBI_GenBank
Match: EWM29673.1 (hypothetical protein Naga_100112g20 [Nannochloropsis gaditana])

HSP 1 Score: 963.0 bits (2488), Expect = 6.500e-277
Identity = 535/879 (60.86%), Postives = 646/879 (73.49%), Query Frame = 0
Query:    2 LSRRNPRTTTLVMTPLLFVSILAALLTTTSMLPRVTAVKLGKVSPRVWENLEAEGINAAA---XXXXXXXXXXXXXXXXXXXXSVKQAEELRRLKVEMARREALDKAKDIDWKSTADAAKKERELDEKYGVWKHVILNPWFQWVMGLLDDLFAIELMGEARMAPAAIVVLLFMLYRAKQPLSYLALAAAFFYNIHPILVGGLTVGMKVWALRRKPKGYVPPNKRAGXXXXXXXXXXXXXXXXXXXPTRLRK---GDGLSADARDMQTLTSLPKEVDHIVLGSDVGGLYTAALLARVGHTVLVLESGDSLGNCMTEMKGVQVDYGLLSVGKLQVYDKMLQSAYLEGAPAVKWSRVGTEENGYSFDVARVGNLGDVVYRAGKQALIDDQVISAPGPENRGRVGMFVTRVESVAREQAAFWVGRLFGQKXXXXXXXXXXXXYGGIGGRTVQEVTSVTLPEWGSLDVMRGGFRTENLGPGEVSFAAYVSALSQGMEGLNWPQGGYRSVARALVPTIKKAGGMVLTRVKVKGILMSVTKRGEKKEKGGDTGQTSAAAGKRRAVGVMLENGLEIKCRESIIGSSGVVPLFTQWLPKEVALPFGGDHLEEARPRLYTLLLLKGSAEELDLPASDYYQVPT--EDGVGGEVPGGWFHVYFPSAKHPSGVAAPAXXXXXXXXXXXXXXXQEQLYSTCVIETEADDDIVEACYRRMDGSTSSRPAVQIAPGLAATGPTAXXXXXXXLPNAGVFGPGP-GLKYYKMKQPSDAKIRRLQQMMMKRLVQLYPQIAGQFEEEHGGIQTIGPFRVGLSHRPARFVAPGLRTRIAPGVENVFLGGGDLVLGTFGGSVMGGWLAAHSALGYGAVDLLMLGRSLNEDLKNVPRGRYE 872
            L+RR  R + L MTPLL +   A +  + + +  V AVKLG VSPRVWE+LE +GI++     XXXXXXXXXXXXXXXXXXXX     EEL+RLKVE ARREALD+AKDIDWKSTADAAKKERELDEKYG+WKHVILNPWFQWVMGLLDDL AIEL+GEARMAPAAI+VLL+ML++A+QPLS L LAAAFFYNIHPIL+ G  VG+K W+  R+PKGYVP  +R                       +  K     GLS DARD++TL +LP++VDHIVLGSDVGGLY AALLARVGH VLVLE G+++GNC +E+KGV+ D+GLL+ G + VYD++L++  LEGAP VKWSR+GTE +G+SFDV ++  LGDVVYRAGKQAL+DDQV SAPGPENR RVG FV+R+++VAREQ+AF++GRLF Q+            YGG+G RT ++V  VTLP++  LD++RG FRTENL P E+SFAAYVSA +  +EGL++PQGG+RS+ARALVPTI+ AGG VLTR  V+ IL+                   + +   RAVGV+LENG ++ C +S+I +SGVVPLFTQ+LPK   LP GGD L+EARPRLYTL+LLKGSAEEL+LPASDYYQ+PT          P GWFH+YFPSAK PSGVA                    + YSTCVIETEADDDI+E CYRR+DGSTSS+P          +GP          P +     GP GLK+Y +K PSD K+RRLQQ +++ L+QLYPQ+ G  EE+  GIQT+GPFRVGLSHRP RF+APGLRTRI PGV NV LGGGDLVLGTF GS++GGWLAAHSAL YGA+DLL+L R+LN DLKNVPR RYE
Sbjct:    4 LTRRKQRASVLKMTPLLLLP--AFIFLSPASVHEVAAVKLGTVSPRVWESLERQGIDSEVMDXXXXXXXXXXXXXXXXXXXXXXXXXXEELKRLKVERARREALDRAKDIDWKSTADAAKKERELDEKYGMWKHVILNPWFQWVMGLLDDLAAIELVGEARMAPAAILVLLYMLFKARQPLSVLCLAAAFFYNIHPILIAGSAVGLKAWSKLRRPKGYVPAEERKKRLPGAADEAQGVEGDPRSAQAKRGKAHGAPGLSEDARDIRTLLTLPQDVDHIVLGSDVGGLYAAALLARVGHRVLVLEGGETVGNCTSELKGVECDWGLLNAGMVHVYDELLKAGALEGAPEVKWSRIGTEADGHSFDVVKIEGLGDVVYRAGKQALVDDQVTSAPGPENRERVGTFVSRLQAVAREQSAFFIGRLFSQQTAGWITTLLGQQYGGVGARTAEQVLGVTLPDYRQLDLLRGMFRTENLQPSELSFAAYVSATNHALEGLSYPQGGFRSLARALVPTIQAAGGRVLTRAHVREILL------------------DSQSKPTRAVGVVLENGEKVSCAKSVICASGVVPLFTQYLPK-APLPAGGDCLQEARPRLYTLVLLKGSAEELELPASDYYQLPTXXXXXXXXXXPRGWFHIYFPSAKEPSGVATITGPVGKDTHGKEEAKGGARGYSTCVIETEADDDILEVCYRRVDGSTSSKP---------VSGPADARSKGKAAPGSSTMAAGPSGLKFYHIKPPSDQKVRRLQQGLVRHLLQLYPQLEGHVEEQ--GIQTVGPFRVGLSHRPPRFMAPGLRTRIVPGVANVLLGGGDLVLGTFVGSLLGGWLAAHSALNYGALDLLVLERNLNNDLKNVPRPRYE 850          
BLAST of NO03G02250 vs. NCBI_GenBank
Match: XP_002176833.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51296.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 190.7 bits (483), Expect = 2.000e-44
Identity = 214/880 (24.32%), Postives = 340/880 (38.64%), Query Frame = 0
Query:  105 AKDIDWKSTADAAKKERELDEKYGVWK----------HVILNPWFQWVMGLLDDLFAIELMGEARMAPAAIVVLLFMLYRAKQPLSYLALAAAFF-YNIHPILVGGLTVGMKVWALRRKPKGYVPPNKRAGXXXXXXXXXXXXXXXXXXXPTRLRK-GDGLSADARDMQTLTSLPKEVDHIVLGSDVGGLYTAALLARVGHTVLVLESGDSLGNCMT----EMKGVQVDYGLLSVGKLQVYDKMLQSAY---LEGAPAVKWSRVGTEENGYSFDVARVGNLGDVVY----------RAGKQALIDDQV-------ISAPGPENRGRVGMFVTRVESVAREQAAFWVGRLFGQKXXXXXXXXXXXXYGGIGGRTVQEVTSVTLPEWGSLDVMRG-GFRTENLGPGEVSFAAYVSALSQGM--EGLNWPQGGYRSVARALVPTIKKAGGMVLTRVKVKGILMSVTKRGEKKEKGGDTGQTSAAAGKRRAVGVMLENGLEIK------------CRESIIGSSGVVPLFTQWLPKEVAL----PFGGDHLEEARPRLYTLLLLKGSAEELDLPASDYYQVP-------------------------TEDGVGGEV---------------PG------------------------GWFHVYFPSAKHPSGVAAPAXXXXXXXXXXXXXXXQEQLYSTCVIETEADDDIVEACYRRMDGSTSSRPAVQIAPGLAATGPTAXXXXXXXLPNAGVFGPGPGLKYYKMKQPSDAKIRRLQQMMMKRLVQLYPQIAGQFEEEHGGIQTIGPFRVGLSHRPARFVAPGLRTRIA-PGVENVFLGGGDLVLG-TFGGSVMGGWLAAHSALGYGAVDLLMLGRSLNEDLK 864
            AK   WK+ A+AAK ER LDEKYG+ +          H I     ++ MG     F+    G+  +  +  V++LFM+ R +     + L   FF   + P  +  +   ++   +RRK K   P  K                         L   G+ L +      +L       D ++LGS    LY A+LL+R G  VLVL S +    C++    E   V  D    +V K+    ++L  A     +    V+++++G+ E+ ++F++  +  +G   Y            G   LIDD           A G       G +    E++      F++ ++  +K             G    ++    T    P   SL  M G G + EN+ PG  S AA+V+ +S  +  EG+++P GG R++ RAL   + ++GG VLT V V  ++    +  E+  KG      +      R VGV L +G EIK            C  ++I   G +  F   LP ++ +    P G   L   RP    L  LKGSA++L++  +DYY++P                         ++ G  G+                PG                         W HV FPSAK PS                     +    +TCV+  EADDD V                                           F   P +   K    +   + RL + + K +  ++PQ+  + +      +  GPF+ GLSH P RF A G+R     PG   +F+GG DL +G +F G ++G WLAA++   YG +D L L +++  D++
Sbjct:  125 AKAGKWKAHANAAKFERILDEKYGILRPFITNHPEIEHFIRGVQRKYAMG----YFSPFRQGDPPIPRSTAVIILFMMQRGQMRWEIMLLTTLFFLIGLQPWALVAVVGVLQGLLMRRKAK---PLGKMKRFIPAVESYYTDAKTDTEKHELLLHPVGEPLPSKEEIDASL------FDALILGSGPASLYIASLLSRAGRKVLVLSSRNDASGCLSIKHAEYSNVPFDVEASNVAKISRQQQILAPALCTETDTQGGVRFAQIGSNEDAHAFEILSIPGMGTDSYDEELPFILNADGGTAGLIDDAAKYLNDGWPDAEGGNGNSVTGAYAAACEAINSTANEFYISKILSEKVNSLRSSPTYQDSGIRYAQSFLNKTFTINPHTRSL--MAGIGMKGENIRPGATSMAAHVTNISAALSGEGMHYPIGGPRALCRALANVVLRSGGRVLTSVDVAELIFGEPR--EQASKGKQKEGDNDGPPPPRCVGVKLSDGREIKFASDRFDEKNGSCLPAVISMEGFIWTFINMLPDDIRMKYKVPRGLPALSSRRPVFKVLFALKGSADQLNVTGADYYRLPNAAVARDEFDQSSGQIKHGEIGWSDSDTGDNGDAYADGGKNLMDVINQDPGSISDEHIVNSSRKRARKTKFEAGSSWLHVSFPSAKDPS------------------FEERHGKTTTCVVTIEADDDFVT-----------------------------------------YFDTKPKIYVIKNASATKGDLDRLLERVKKDVYHIFPQLRDKVDH----CEICGPFQKGLSHNPERFAAKGIRADTPYPG---LFVGGSDLTVGESFSGDIVGAWLAANAVEQYGPLDHLFLQKNITTDIE 921          
BLAST of NO03G02250 vs. NCBI_GenBank
Match: XP_005855609.1 (hypothetical protein NGA_2046300, partial [Nannochloropsis gaditana CCMP526] >EKU20751.1 hypothetical protein NGA_2046300, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 182.6 bits (462), Expect = 5.500e-42
Identity = 96/172 (55.81%), Postives = 123/172 (71.51%), Query Frame = 0
Query:  435 GGIGGRTVQEVTSVTLPEWGSLDVMRGGFRTENLGPGEVSFAAYVSALSQGMEGLNWPQGGYRSVARALVPTIKKAGGMVLTRVKVKGILMSVTKRGEKKEKGGDTGQTSAAAGKRRAVGVMLENGLEIKCRESIIGSSGVVPLFTQWLPKEVALPFGGDHLEEARPRLYTL 607
            GG+G RT ++V  VTLP++  LD++RG FRTENL P E+SFAAYVSA +  +EGL++PQGG+RS+ARALVPTI+ AGG VLTR  V+ IL+                   + +   RAVGV+LENG ++ C +S+I +SGVVPLFTQ+LPK   LP GGD L+EARPRLYTL
Sbjct:    1 GGVGARTAEQVLGVTLPDYRQLDLLRGMFRTENLQPSELSFAAYVSATNHALEGLSYPQGGFRSLARALVPTIQAAGGRVLTRAHVREILL------------------DSQSKPTRAVGVVLENGEKVSCAKSVICASGVVPLFTQYLPK-APLPAGGDCLQEARPRLYTL 153          
BLAST of NO03G02250 vs. NCBI_GenBank
Match: XP_002295567.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >ACI64284.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 179.9 bits (455), Expect = 3.600e-41
Identity = 218/831 (26.23%), Postives = 352/831 (42.36%), Query Frame = 0
Query:  110 WKSTADAAKKERELDEKYGVWKHVI-LNPWFQWVMGLLDDLFAIELM-----GEARMAPAAIVVLLFMLYRAKQPLSYLALAAAF-FYNIHP-ILVGGLTVG-MKVWALRRKPKGYVPPNKRA-----GXXXXXXXXXXXXXXXXXXXPTRLRKGDGLSADARDMQTLTSLPKEVDHIVLGSDVGGLYTAALLARVGHTVLVLESGDSLGNCMTEMKG---VQVDYGLLSVGKLQVYDKMLQSAY---LEGAPAVKWSRVGTEENGYSFDVARVGNLGD----------VVYRAGKQALIDDQVI----SAPGPENRGRVG------MFVTRVESVAREQAAFWVGRLFGQKXXXXXXXXXXXXYGGIGGRTVQEVTSVTLPEWGSLDVMRG--GFRTENLGPGEVSFAAYVS--ALSQGMEGLNWPQGGYRSVARALVPTIKKAGGMVLTRVKVKGILMSVTKRGEKKEKGGDTGQTSAAAGKRRAVGVMLENGLEIKCRE--SIIGSSGVVPLFTQWLPKEV----ALPFGGDHLEEARPRLYTLLLLKGSAEELDLPASDYYQVPTE-------DGVGGEVPGGWFHVYFPSAKHPSGVAAPAXXXXXXXXXXXXXXXQEQLYSTCVIETEADDDIVEACYRRMDGSTSSRPAVQIAPGL--------AATGP----------TAXXXXXXXLPNAGVFGPGPGLKYYKMKQPSDAKIRRLQQMMMKRLVQLYPQIAGQFEEEHGGIQTIGPFRVGLSHRPARFVAPGLRTRIA-PGVENVFLGGGDLVLG-TFGGSVMGGWLAAHSALGYGAVDLLMLGRSLNEDLK 864
            WK  A+AAK ER LDEKYG ++  I  +P  +  +  +   +A+        GE  M+  + ++LLFM++R       +AL A F    + P  LVG + VG   V   RRK  G +P   +               XXXX          L K  G   +  D   L+   +E D I+LG     LYTA+LL+R G   LVL   +    C+T   G   V  D    ++  L     +L  A     +    ++++R+G+E +GY+  +  V  LG           V+   G+ AL +        + PG +  G          ++     +      F++ +LF  K            Y     R      +  LP    +  +    G   ENL P + S AA+V+        EG  +P GG R++  AL   I++ GG V++ V ++ +L    ++ EKKE   +T    +   K R  G+ LENGLE+   +  +++   G++P F Q +  +V     +P G   LEE RP +  ++ LKG+ ++L+L  +D+Y++P         D + G+V  G   V                              +E +      ETEA         +R   +TS  P  +   G+        +A  P          T             +F   P  K Y + +  + +  RL+  ++K L++ +PQ+ GQ E     +Q  GP R GL+H   RF   G R     PG   +++GG DL +G +F G+++GGWLAA++ +GY  +D + LG+++  DL+
Sbjct:  157 WKIHANAAKFERLLDEKYGRFRPFIESHPELEVFIKKVQRKYAMGQFSPLRKGEGPMSTTSSIMLLFMMHRNGVRKELVALVALFTLVGLEPWALVGLVCVGKYSVDQRRRKRIGGMPKKVKVVESYYAHGVVGEEEXXXXEVERSKKYAILEKPVGTIFNPAD---LSLRDEEYDVILLGCGPEVLYTASLLSRAGKKTLVLSPREDASGCLTLQNGKTNVPFDIDGSNIAHLARQQSLLAPALCTTTDTQGGIRFARIGSEVDGYAHSILSVPGLGTDSISNECIPIVLTAEGEVALAEYCSTYLGDAFPGTDLDGNDNGNSTSLSYLKACGQINAGSGDFYLAKLF-PKAAESFKSSDSNVYQQASIRPASTFLNKCLPLNTHVRALMAAIGMANENLSPDKTSMAAHVTNVCAMTSTEGYAYPVGGPRALCHALTSVIEQNGGRVVSGVLLQELLF---EKLEKKEPKEETKDGESKEPKPRCKGIRLENGLELSVSDKGAVVSFMGMIPTFLQLVSPDVRTAEGVPAGLPALEERRPLMRVMISLKGNKDDLNLTGADWYRLPNATLPRDELDPMTGQVKFGTIGV----------------------DDDNTGASEELILGEATDETEATTSHTRG--KRNKAATSKAPRSKFTSGVSWMKVSFPSAKDPSWQDRHGDVSTCVVTVEADDDFVQMFDTKP--KIYSVLKAGNGERERLRDRVLKDLLETFPQLQGQLET----VQICGPVRSGLTHNGPRFAIKGNRPETPYPG---LYIGGADLTVGDSFSGAIVGGWLAANAIMGYSFMDHMYLGKNITSDLQ 947          
BLAST of NO03G02250 vs. NCBI_GenBank
Match: CBJ26382.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 177.9 bits (450), Expect = 1.400e-40
Identity = 223/840 (26.55%), Postives = 335/840 (39.88%), Query Frame = 0
Query:   88 ELRRLKVEMARREALDKAKDIDWKSTADAAKKERELDEKYGVWKHVILNPWFQWVMGLLDDLF-AIELMGEARMAPAAIVVLLFMLYRAKQPLSYLALAAAFFYNIHPILVGGLTVGMKVWALRRKPKGYVPPNKRAGXXXXXXXXXXXXXXXXXXXPTRLRKGDGLSADARDMQTLTSLPKEVDHIVLGSDVGGLYTAALLARVGHTVLVLESGDSLG-----NCMTEMKGVQVDYGLLSVG---KLQVYDKMLQSAYL-----EGAPAVKWSRVGTEENGYS-FDVARVGN-LGDVVYRAGKQALIDDQVISAPGPENRGRVGMFVTRVESVAR-EQAAFWVGRLFGQK--------XXXXXXXXXXXXYGGIGGRTVQEVTSV---TLPEWG-SLDVMRGG----FRTENLGPGEVSFAAYVSALSQGMEGLNWPQGGYRSVARALVPTIKKAGGMVLTRVKVKGIL--------MSVTKRGEKKEKGGDTGQTSAAAGKRRAVGVMLENGLEIKCRESIIGSSGVVPLFTQWLPKEVALPFGGDHLEEARPRLYTLLLLKGSAEELDLPASDYYQVPTEDGVGGEVPGGWFHVYFPSAKHPSGVAAPAXXXXXXXXXXXXXXXQEQLYSTCVIETEADDDIVEA-----------------CYRRMDGSTSSRPAVQIAPGLAATGPTAXXXXXXXLPNAGVFGPGPGLKYYKMKQPSDAKIRRLQQMMMKRLVQLYPQIAGQFEEEHGGIQTIGPFRVGLSHRPARFVAPGLRTRIAPGVENVFLGGGDLVLGTFGGSVMGGWLAAHSALGYGAVDLLMLGRSLNEDLKNVPRGR 870
            E+  L  +  RR+A  K         A+ AK EREL EKYGV K VIL+P  QW++GL   L+ +  L G+  +   A VV+  M+YR K     ++LAAA    ++P++V  + +  K+WA  +    ++P   R                     P  L   D LS D    +  T+  +E DH+V+GSD+GGL+ AALL+R G  VLVLE G   G            G + + G+  +G   KL  + + LQ A+L      G   +KW +VG  E+     D+  VG+    V++ A ++ L++   + A  PE R     F  + +        A+++ +LF  +                    +  I  R+V E+      T PE    L+  +      FR+ENL P  VS AA +   S    GL  P+GG+R++A  LV +I  +GG VLTR K   ++        ++V +                         ++  +GL      S+I S GV+  F   LP++ AL         A                          +  +DG G +  G  F +              A                E L  T        D +VE                  C      S  S    +    +  T           +   G      G   Y + QP  +   RL++ +++RL Q +PQ  G+ E     I      R GLS  P R++A G+R      V   FL G DL +    G VMGGW+AAH+ALGY   D+ +  RSL  D+ N+ + R
Sbjct:   45 EVASLLAKELRRDAFLK---------ANGAKFERELHEKYGVLKDVILHPTVQWLLGLCAQLWRSFHLFGKPPLGTTAGVVVGLMIYRRKVGFVNMSLAAAALSGLNPLVVVAVALAWKLWASTK----FLPRGCR--------------HNPEYEAPEDL-GADKLSDDFEPAKVSTAPGEEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLAGAGAVVKAPAGAGGWEFETGVQCLGGGDKLGRFIERLQLAFLPADEGSGKEKLKWEKVGRLESDLCVHDMVSVGDGKQTVLFPAEQEKLLES--LMAQFPERRPFFRAFFGQAQKEKEGGSLAYYLLKLFASRPARWLDRVVVGLLATAPAMAHVEIAKRSVSEMMKAMLKTQPEGNDDLEAAQAALCALFRSENLAPSRVSCAALMGQTSSAWGGLYHPRGGFRAIAEELVDSIHASGGRVLTRAKATSVIVGKERAEGVTVVRXXXXXXXXXXXXXXXXXXXXXXXXIMVAGDGL-----GSVISSIGVIDTFRGLLPRKSAL------TTRAAXXXXXXXXXXXXXXXXXXXGETVTALGEKDGEGLDPAG--FRI------------LRAARPRVHLCVGLQGNWLEDLDGTSSYVHHVRDSMVEXXXXXXXXXRHEGKLPDWCRISFGESKDSAGWKKETTSVVVTAEMTEEMAKLTIDGVGSTNEPIGPLRYTV-QPGRSGRERLRERLLRRLHQDFPQTQGRDE----FIMLAEQPRAGLSEGPERYLAKGVRA--PTKVPGFFLAGEDLTISGMEGGVMGGWIAAHAALGYTPTDMFLRRRSLASDIPNLDKLR 822          
BLAST of NO03G02250 vs. NCBI_GenBank
Match: GAX25572.1 (hypothetical protein FisN_28Hh041 [Fistulifera solaris])

HSP 1 Score: 174.9 bits (442), Expect = 1.100e-39
Identity = 205/862 (23.78%), Postives = 344/862 (39.91%), Query Frame = 0
Query:  110 WKSTADAAKKERELDEKYGVWKHVIL-NPWFQWVMGLLDDLFAIELMGEARMAP---AAIVVLLFMLYRAKQPLSYLALAAAF-FYNIHPILVGGLTVGMKVWALRRKPKG--------------YVPPNKRAGXXXXXXXXXXXXXXXXXXXPTRLRKGDGLSADARDMQTLTSLPKEVDHIVLGSDVGGLYTAALLARVGHTVLVLESGDSLGNCMTEMKGVQVDYGLLSVGKLQVYDKMLQSAYL---EGAPAVKWSRVGTEENGYSFDVARVGNLG--------DVVYRA--GKQALIDDQVI-------SAPGPENRGRVGMFVTRVESVAREQAAFWVGRLFGQKXXXXXXXXXXXXYGGIGGRTVQEVTSVTLP-EWGSLDVMRG-GFRTENLGPGEVSFAAYVSALSQGM--EGLNWPQGGYRSVARALVPTIKKAGGMVLTRVKVKGILMSVTKRGEKKEKGGDTGQTSAAAGKRRAVGVMLENGLEI---------KCRESIIGSS-GVVPLFTQWLPKEVALPFGGDH----LEEARPRLYTLLLLKGSAEELDLPASDYYQVP------------------------------------TEDGVGGE------------VPG-GWFHVYFPSAKHPSGVAAPAXXXXXXXXXXXXXXXQEQLYSTCVIETEADDDIVEACYRRMDGSTSSRPAVQIAPGLAATGPTAXXXXXXXLPNAGVFGPGPGLKYYKMKQPS--DAKIRRLQQMMMKRLVQLYPQIAGQFEEEHGGIQTIGPFRVGLSHRPARFVAPGLRTRIAPGVENVFLGGGDLVLG-TFGGSVMGGWLAAHSALGYGAVDLLMLGRSLNEDL 863
            W+  A+AA+ ER LDEKYG+++  I  +P  +  +  L   +A+      R  P   +  V++LFM+ R       + LA  F    + P  + GL + ++    RR  +               Y    K  G                   P     G  L  D   + T      + D I+LGS    L+ AALL+R G  VLVL       + + ++ G+ VD G +++ ++      L  A     +    ++++++GTE +G++F +  +  +G          + +A  G  +L+ D           + G      VG ++  +ES+     AF++ ++  +             Y  +  +  + + +   P    +  +M G G   ENL P + S A +V+ L   +  EG+++P GG R++  AL  TI+K GG ++T + +K ++      G+ ++K  +         K   VGV L +G EI         K  + ++ S    +  F + +P E+   +G       L+E RP +     LKGSA+ELDL  +D+Y++P                                    T   + GE             PG  W H+ FPSAK PS  +                       STCVI  EADDD+V                                            G  P +   K   P      ++ LQ+ + K L++LYPQ+ G+     G +Q  GP  +GLSH P R+ A G+  R+    +++  GG D+ +G +F  S++  WLAA++ +GY   D L   +++  DL
Sbjct:  120 WRIHANAARFERNLDEKYGIFRPFITQHPEIETFVRTLQRKYAMGEFSPLRKPPIPRSTAVIILFMMTRGNLGWQVMLLAFLFLLVGLQPWALVGLVLVLQTIKNRRLRQRVGTMPHRIPTLTPYYYHHQKPQGEPDETPDQEMQRKHQLLLRPV----GMPLGQDEASIDT-----SQYDTILLGSGAATLFAAALLSRAGRKVLVLCPNHDASD-VEDIDGIPVDMGSMNITRIAKQQAFLAPALCTENDCQGGIRFAQIGTEADGHAFQILSIPGVGADKASDQIPFILKAAGGTYSLMADVATDLGDGWPGSDGSAGDSAVGAYIDALESLNATAGAFYLSKILPES---ANKYQSKSSYQTVSVQYAESILNQCFPLNTHTRSLMAGVGLPGENLRPSKASMAVHVTNLCGALSGEGMHYPIGGSRALCHALANTIEKLGGRIVTGLHLKELVFVEPLGGDDEKKSSE---------KPSCVGVRLMSGQEIVFAADRFRSKANDPVVVSMLTFIDTFVRIMPAEIRTKYGHPEGLGALQEQRPVVKFAYSLKGSAQELDLTGADFYRLPGAARALDEINPSTNTIRHGEIGWEDEDEQRVSGVSETVTDLSGEDRKRRKHRQKQFEPGVSWMHIAFPSAKDPSFSSV------------------HPNMSTCVITVEADDDLV-----------------------------------------ADMGTNPRIFQTKQSNPKLFLENLKNLQRKVEKELIELYPQLEGKLIV--GKLQ--GPQSMGLSHTPERYAAKGV--RVDTPYKHLLYGGSDVTIGASFSASLVAAWLAANAVVGYSTFDHLFYQKNITTDL 894          
BLAST of NO03G02250 vs. NCBI_GenBank
Match: GAX29213.1 (hypothetical protein FisN_28Lh041 [Fistulifera solaris])

HSP 1 Score: 167.2 bits (422), Expect = 2.400e-37
Identity = 201/866 (23.21%), Postives = 344/866 (39.72%), Query Frame = 0
Query:  110 WKSTADAAKKERELDEKYGVWKHVIL-NPWFQWVMGLLDDLFAIELMGEARMAP---AAIVVLLFMLYRAKQPLSYLALAAAFFYNIHPILVGGLTVGMKVWAL-------------RRKPKGYVPPNKRAGXXXXXXXXXXXXXXXXXXXPTRLRK------GDGLSADARDMQTLTSLPKEVDHIVLGSDVGGLYTAALLARVGHTVLVLESGDSLGNCMTEMKGVQVDYGLLSVGKLQVYDKMLQSAYL---EGAPAVKWSRVGTEENGYSFDVARVGNLG--------DVVYRA--GKQALIDDQVI-------SAPGPENRGRVGMFVTRVESVAREQAAFWVGRLFGQKXXXXXXXXXXXXYGGIGGRTVQEVTSVTLP-EWGSLDVMRG-GFRTENLGPGEVSFAAYVSALSQGM--EGLNWPQGGYRSVARALVPTIKKAGGMVLTRVKVKGILMSVTKRGEKKEKGGDTGQTSAAAGKRRAVGVMLENGLEI---------KCRESIIGSS-GVVPLFTQWLPKEVALPFGGDH----LEEARPRLYTLLLLKGSAEELDLPASDYYQVP------------------------------------TEDGVGGE------------VPG-GWFHVYFPSAKHPSGVAAPAXXXXXXXXXXXXXXXQEQLYSTCVIETEADDDIVEACYRRMDGSTSSRPAVQIAPGLAATGPTAXXXXXXXLPNAGVFGPGPGLKYYKMKQPS--DAKIRRLQQMMMKRLVQLYPQIAGQFEEEHGGIQTIGPFRVGLSHRPARFVAPGLRTRIAPGVENVFLGGGDLVL-GTFGGSVMGGWLAAHSALGYGAVDLLMLGRSLNEDL 863
            W+  A+AA+ ER LDEKYG+++  I  +P  +  +  +   + +      R  P   +  V++LFM+ R    L +  +  AF +         L VG++ WAL             R + +    P +                        R R+      G  L  D   + T        D I+LGS    L+ AALL+R G  VLV+       + + ++ GV VD G +++ ++      L  A     +    ++++++GTE +G++F +  +  +G          V +A  G  +L+ D           + G      VG ++  +ES+     AF++ ++  +             Y  +  +  + + +   P    +  +M G G   ENL P + S A +V+ L   +  EG+++P GG R++  AL  TI+K+GG ++T + +K ++      G+ ++K  +         K   VGV L +G EI         K  + ++ S    +  F + +P E+   +G       L+E RP +     LKGSA +LDL  +D+Y++P                                    T   + GE             PG  W H+ FPSAK PS                          STCVI  EADD++V                                            G  P +   K   P      ++ LQ+ + + L++LYPQ+ G+     G ++  GP  +GLSH P R+ A G+  R+    +++  GG D+ + G+F  S++  WLAA++ +GY   D L   +++  DL
Sbjct:  117 WRVHANAARFERNLDEKYGIFRPFITQHPEIETFVRNVQRKYVLGEFSPLRKPPIPRSTAVIILFMMTRGN--LGWQVMLLAFLF---------LLVGLQPWALVGLVMVLHTIKNRRLRQRVGTMPKRIPTFTPYYQKPQGEQEETPEQEKQRKRQLLLRPVGMPLGQDETPIDT-----SHYDTILLGSGAATLFAAALLSRAGRKVLVVCPNHDASD-VEDIDGVPVDMGSMNITRIAKQQAFLAPALCTENDCQGGIRFAQIGTEADGHAFQILSIPGVGADKASDQIPFVLKAAGGTYSLMTDAATDLGDGWPGSDGSAGDSAVGAYIDALESLNATAGAFYLSKILPES---ANKYQSKSSYQTVSVQYAESILNQCFPLNTHTRSLMAGAGLPGENLRPSKASMAVHVTNLCGALSWEGMHYPIGGSRALCHALANTIEKSGGRIVTGLHLKELVFVEPSGGDDEKKSSE---------KPSCVGVRLMSGQEIVFAADRFRGKANDPVVVSMLTFIDTFVRIMPAEIRTKYGHPEGLGALQEQRPVVKFAYSLKGSARDLDLTGADFYRLPGAARALDEINPSSNTIRHGEIGWEDEDEQRVSGVAETVTDLSGEDRKRRKHRQKQFEPGVSWMHIAFPSAKDPS------------------FSSLHPNMSTCVITVEADDELV-----------------------------------------ADMGTNPRIFQTKQSNPKLFLENLKNLQRKVEEELIELYPQLEGKLIA--GKLE--GPQSMGLSHTPERYAAKGV--RVDTPYKHLLYGGSDVTIGGSFSASLVAAWLAANAVVGYSTFDHLFYQKNITTDL 888          
BLAST of NO03G02250 vs. NCBI_GenBank
Match: XP_009036806.1 (hypothetical protein AURANDRAFT_25702 [Aureococcus anophagefferens] >EGB08828.1 hypothetical protein AURANDRAFT_25702 [Aureococcus anophagefferens])

HSP 1 Score: 162.5 bits (410), Expect = 5.900e-36
Identity = 165/653 (25.27%), Postives = 266/653 (40.74%), Query Frame = 0
Query:  251 DGLSAD-ARDMQTLTSLPKEVDHIVLGSDVGGLYTAALLARVGHTVLVLESGDSLGNCMTEMK--GVQVDYGLLSVGKLQVYDKMLQSAYLEGAPAVKWSRVGTEENGYSFDVARVGNLGDVVYRAGKQALIDDQVISAPGPENRGRVGMFVTRVESVAREQAAFWVGRLFGQKXXXXXXXXXXXXYGGIGGRTVQEVT--SVTLPEWGSLDVMRGGFRTENLGPGEVSFAAYVSALSQGMEGLNWPQGGYRSVARALVPTIKKAGGMVLTRVKVKGILMSVTKRGEKKEKGGDTGQTSAAAGKRRAVGVMLENGLE-IKCRESIIGSSGVVPLF----------TQWLPKEVALPFGGDHLEEARPRLYTLLLLKGSAEELDLPASDYYQV-----------PTEDGVGGEVPG--GWFHVYFPSAKHPSGVAAPAXXXXXXXXXXXXXXXQEQLYSTCVIETEADDDIVEACYRRMDGSTSSRPAVQIAPGLAATGPTAXXXXXXXLPNAGVFGPGPGLKYYKMKQPSDAKIRRLQQMMMKRLVQLYPQIAGQFEEEHGGIQTIGPFRV------GLSHRPARFVAP---GLRTRIAPGVENVFLGGGDLVLGTFGGSVMGGWLAAHSALGYGAVDLLMLGRSLNEDLKNV 866
            DG +A   R++     +P + D++V+GS V GLY AALL+R G+ V+VLE     G CM E    G   D G+  VG+ + Y K++    L     V W+R+G+E +G+++D  RVG+L     RAG+   + D  ++   P   GR+  +V   ++  +E   ++ G+LF +             + G    TV EV      + +   +  + G      L P E SF  +    S  M G   P GG +++A ALV T+   GG VL R  V+ +++S            D G         RAVGV LE+  + I  +  ++ ++G +              +W    +  P   D +E+    L   +    +A ELDLP+ + + V              DG      G  G + V FPSAK PS  A+                      +TC I +E +    EA +R                                        P      +K  +  DA  +  ++ M+ +L +L+PQ  G+      G        +      GL+    R+ +P    +R  +A  +  +F+ G D+    + G++M G + A + LGYG +DL +  R L  DL  V
Sbjct:   19 DGSTAPRTREIFRHKKVPADADYVVVGSGVSGLYLAALLSRCGYVVVVLEQHYLAGGCMHEFADGGFTFDTGVHYVGRAEKYGKLMDMVSLP-RRRVAWARLGSECDGFAYDCLRVGDLPPHALRAGEDRFVAD--LAKRWPAYEGRIRRYVALCKTSNKEADNYFFGKLFPRFIQKLVAPRLCRKFYGFASATVDEVIRGDCGIDDDDLVATLTGYAGNYGLAPSEASFFVHAGVASHYMGGAYVPVGGPQAIADALVATVNAYGGRVLMRAAVERVVLS------------DAG---------RAVGVQLEDDDKVILAKRGVVSAAGCLQTLKLLPDAARREVEW-ADAILNPASEDFVEQGISHLSLFVGFDTTAAELDLPSQNQWCVSGSGETAKAWRALPDGAAAAARGDLGTYFVGFPSAKDPSARASKP--------------------ATCSIISETN----EAWWR----------------------------------------PWADSPAHKRPEAYDALKKAFEERMLAKLYELFPQCEGRVVFSKLGTSLTNDHYLKRAASYGLAPTTKRYASPKMAAIRPEVAE-IPGLFITGQDVTTAGWAGALMSGVMTAMAILGYGFLDLAVFNRDLVTDLLRV 581          
BLAST of NO03G02250 vs. NCBI_GenBank
Match: OEU16950.1 (hypothetical protein FRACYDRAFT_186122 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 141.0 bits (354), Expect = 1.800e-29
Identity = 219/902 (24.28%), Postives = 357/902 (39.58%), Query Frame = 0
Query:  104 KAKDIDWKSTADAAKKERELDEKYGVWKHVILN-PWFQWVMGLLDDLFAIE-----LMGEARMAPAAIVVLLFMLYRAKQPLSYLALAAAFFYNIHPILVGGLTVGMKVWAL--------------RRKP----KGYVPPN----------KRAGXXXXXXXXXXXXXXXXXXXPTRLRKGDGLSADARDMQTLTSLPKEVDHIVLGSDVGGLYTAALLARVGHTVLVLESGDSLGNCMTEMKGVQVDYGLLS--VGKLQVYDKMLQSAYLEGAP---AVKWSRVGTEENGYSFDVARVGNLGD----------VVYRAGKQALIDDQVISA----PG--PENRGR--VGMFVTRVESVAREQAAFWVGRLFGQKXXXXXXXXXXXXYGGIGGRTVQEVTS-----VTLPEWGSLDVMRGGFRTENLGPGEVSFAAYVSALSQGM--EGLNWPQGGYRSVARALVPTIKKAGGMVLTRVKVKGILMS------VTKRGEKKEKGGDTGQTSAAAGKRRAVGVMLENGLEIK----------CRESIIGSSGVVPLFTQWLPKE----VALPFGGDHLEEARPRLYTLLLLKGSAEELDLPASDYYQVP----TEDGVG---GEV-------------------------------------------------PG-GWFHVYFPSAKHPSGVAAPAXXXXXXXXXXXXXXXQEQLYSTCVIETEADDDIVEACYRRMDGSTSSRPAVQIAPGLAATGPTAXXXXXXXLPNAGVFGPGPGLKYYKMKQPSDAKIRRLQQMMMKRLVQLYPQIAGQFEEEHGGIQTIGPFRVGLSHRPARFVAPGLRTRIA-PGVENVFLGGGDLVLG-TFGGSVMGGWLAAHSALGYGAVDLLMLGRSLNEDL 863
            ++K+  WK+ A AA+ ER +DE+YG ++ +I   P  +  +  +   +AI        G+  +  +  V++LFM+ R         L+  FF            +G++ WAL              +R+P    K Y+P                XXXXXXXXXXXXXXXXXXX   L++  G      ++  + S   E D I+LGS    LYTAALL+R G  VLVL S +    C T      + + + S  + +      +L  A          ++++++G+  +G++F++  V  +G           V+   G ++L++D  +S     PG  P++ G      +V    S+      F++ ++                       T++  +S       L       +   G + EN+ P + S  A V+ +   M  EG+++P GG R++  A    I++ GG +LT+V+   +L                                R +G+ L +  EIK           + +++   G++  F + LP E      +P G   L E RP +  +  LKGSA++LD+  +DYY++P     +D +    GEV                                                 PG  W  + FPSAK PS                     +    +TCV+  EADDD V                 +  P L A                            K K  +    + L + +   L+  YPQ+ G+        + +GP   GLSH P R+ A G+R     PG   +F GG DL +G +F  S++GGWLAA++  GY A+D L L ++++ D+
Sbjct:  139 QSKNGGWKAHARAARFERIMDERYGRFRPLIKQYPELEQFVKTVQRRYAIGHFSPFRQGKPPIPKSTAVIILFMMQRGNLRWEVTVLSVLFF-----------LIGLQPWALVVLIAGGHALMDNRKRRPLKPMKKYMPSTPPYYAIEXXXXXXXXXXXXXXXXXXXXXXXXXXIDILKQPVGTKLGVNEV--IHSTSHEYDTIILGSGPSTLYTAALLSRTGRKVLVLSSKEDASGCHTFSGESDIPFDIESSNIARCSKSQTILAPALCSSTDYQGGIRFAQIGSAADGHAFEILSVPGMGTDSSNQDGMPFVLRADGVRSLVEDAALSLGDGWPGVTPDDLGNSASAAYVQVCNSLNETSNQFFMSKILDDNVNNLRKTDIYQE------STIRYASSFLDSGFPLKAHARSLMAAIGMKGENIKPSKTSMGAAVTNICSAMSGEGMHYPIGGPRALCHAFQKVIEENGGRILTQVQYSRLLFDEDSSKXXXXXXXXXXXXXXXXXXXXXLSAPRCIGIQLADKREIKFDLRKFKGKGYQPAVVSMLGLITTFIRLLPNEQRDKYNIPVGLPALAERRPVIKIIFALKGSAKDLDITGADYYRLPAAALAQDEINQDTGEVKLGTIGGHDNETDETEVQQIDQDSSINPQGADSTTTINKPKKSNKVKYEPGTSWMQISFPSAKDPS------------------FESRHGKVTTCVVTIEADDDFV--------------TPFETKPKLYA--------------------------IQKGKGVTHGDHQWLMERVRGDLLTNYPQLEGKITRS----EMVGPCYRGLSHTPLRYAAKGVRPESPYPG---LFSGGSDLTIGESFSASIVGGWLAANAVAGYSALDHLFLQKNISTDI 956          
BLAST of NO03G02250 vs. NCBI_GenBank
Match: XP_004989785.1 (hypothetical protein PTSG_08987 [Salpingoeca rosetta] >EGD78109.1 hypothetical protein PTSG_08987 [Salpingoeca rosetta])

HSP 1 Score: 124.0 bits (310), Expect = 2.300e-24
Identity = 143/636 (22.48%), Postives = 248/636 (38.99%), Query Frame = 0
Query:  258 RDMQTLTSLPKEVDHIVLGSDVGGLYTAALLARVGHTVLVLESGDSLGNC--MTEMKGVQVDYGLLSVGKLQVYDKMLQSAYLEGAPAVKWSRVGTEENGYSFDVARVGN---LGDVVY--RAGKQALIDDQVISAPGPENRGRVGMFVTRVESVAREQAAF--------WVGRLFGQKXXXXXXXXXXXXYGGIGGRTVQEVTSVTLPEWGSLDVMRGGFRTENLGPGEVSFAAYVSALSQGMEGLNWPQGGYRSVARALVPTIKKAGGMVLTRVKVKGILMSVTKRGEKKEKGGDTGQTSAAAGKRRAVGVMLENGLEIKCRESIIGSSGVVPLFTQWLPKEVALPFGGDHLEEARP---RLYTLLLLKGSAEELDLPASDYYQVPTEDGVGGEVPGGWFHVYFPSAKHPSGVAAPAXXXXXXXXXXXXXXXQEQLYSTCVIETEADDDIVEACYRRMDGSTSSRPAVQIAPGLAATGPTAXXXXXXXLPNAGVFGPGPGLKYYKMKQPSDAKIRRLQQMMMKRLVQLYPQIAGQFEEEHGG--------IQTIGPFRVGLSHRPARFVAPGLRTRIAPGVENVFLGGGDLVLGTFGGSVMGGWLAAHSALGYGAVDLLMLGRSLNEDLKNVPR 868
            RD+ +   LPK++D I++GS +  L    LL+R G  VLVLE     G    M E +G + D G+  +G +     +L    L     ++W  +G        D+ +V +   +GD VY   AG+QA ID   ++   P  R  +  +V      +R+   F        W+ RL                +  +   T  E             V+ G F      P + SF  + S ++  + G  +P+GG    A+ ++P I++ GG VL +  V  +++                          AVGV + NG  I+ RE+++ S+GV   + + L  ++      D +E   P    +Y  + ++G+AEEL L  S+ +  P  D         +  V    A  P     P                                   ++ +++  G+TS+   + + P                     V+    G +  K  +  +AK +   + M++     YP+  G+ +    G        + ++     GL++  ARF A     R    ++N +L G D+V     G++M G L AHS LGYG +  L  GR++ ED+ ++ +
Sbjct:   68 RDVYSRKKLPKDIDVIIIGSGISALTLGGLLSRCGRRVLVLEQHYIAGGATHMFEERGYEFDTGVHYIGNVSRRQPILD---LVSEGKIEWDLMGETPQ----DIPKVYDEIAIGDHVYGLPAGRQAFID--TLAKRFPSERAGIEKWVQMCRHASRQDQYFTLKVVRPAWLARLL--------LRFMGGAFYKVFNMTALEAAQSVTDNKELQAVLLGQFGDHGQTPSKASFFMHASVVNHYIRGGYYPRGGSTVFAKKMIPAIERMGGRVLVQQYVDEVIVE----------------------NNTAVGVRMRNGDVIRAREAVVSSAGVFNTYERLLHGDLVPDTILDKIEAIGPSCSMVYLFVGMRGTAEELGLRTSNIWHYPHAD---------FDKVLEDVADDPETAPLPLFVGL--------------------------PSAKDSTWKQRHGNTSTAVILTMCP-------------------HSVWEEWEGTEQGKRGEAYEAKKKMFGERMLEGFFHYYPKCRGKVDYTDVGSSLTFNHYLNSLRGEVYGLANDAARF-AEHDWLRPETNIKNFYLTGQDIVTVGVTGALMAGVLTAHSMLGYGTLSDLFSGRNVIEDIMHLDK 609          
The following BLAST results are available for this feature:
BLAST of NO03G02250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29673.16.500e-27760.86hypothetical protein Naga_100112g20 [Nannochlorops... [more]
XP_002176833.12.000e-4424.32predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_005855609.15.500e-4255.81hypothetical protein NGA_2046300, partial [Nannoch... [more]
XP_002295567.13.600e-4126.23predicted protein [Thalassiosira pseudonana CCMP13... [more]
CBJ26382.11.400e-4026.55conserved unknown protein [Ectocarpus siliculosus][more]
GAX25572.11.100e-3923.78hypothetical protein FisN_28Hh041 [Fistulifera sol... [more]
GAX29213.12.400e-3723.21hypothetical protein FisN_28Lh041 [Fistulifera sol... [more]
XP_009036806.15.900e-3625.27hypothetical protein AURANDRAFT_25702 [Aureococcus... [more]
OEU16950.11.800e-2924.28hypothetical protein FRACYDRAFT_186122 [Fragilario... [more]
XP_004989785.12.300e-2422.48hypothetical protein PTSG_08987 [Salpingoeca roset... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL067nonsL067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR001ncniR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR049ngnoR049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005669NSK005669Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G02250.1NO03G02250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572020gene_1411Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100112g20gene964Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G02250.1NO03G02250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G02250 ID=NO03G02250|Name=NO03G02250|organism=Nannochloropsis oceanica|type=gene|length=2679bp
ATGTTGAGCAGACGGAACCCACGGACGACGACCCTCGTCATGACCCCCCT
CCTGTTCGTGTCCATCCTTGCCGCCCTCCTTACCACCACGTCGATGCTCC
CGCGCGTCACCGCTGTCAAGCTGGGCAAGGTCTCCCCGCGGGTCTGGGAA
AACCTGGAGGCCGAAGGCATCAACGCTGCGGCCATGGAAGAGGCGGTGGC
TGACGCTGCCGCTGCGGCGGCGGAAGAGGAGGAAGAAAAGGTTTCTGTCA
AACAGGCGGAGGAATTGAGACGACTCAAGGTGGAAATGGCTCGAAGGGAA
GCTTTGGATAAGGCGAAAGACATTGACTGGAAATCGACAGCGGACGCCGC
CAAGAAGGAGAGGGAACTGGACGAGAAGTACGGTGTTTGGAAGCATGTTA
TTCTCAACCCGTGGTTTCAATGGGTTATGGGGTTGTTGGACGATTTATTT
GCGATAGAGCTGATGGGCGAGGCAAGGATGGCCCCTGCTGCCATCGTGGT
GTTGCTCTTCATGCTTTACAGAGCCAAGCAGCCTCTGTCGTACCTGGCCC
TCGCCGCCGCGTTTTTCTACAACATCCACCCCATCCTTGTTGGTGGGTTG
ACAGTTGGTATGAAAGTCTGGGCCTTGAGACGTAAGCCCAAAGGCTACGT
CCCGCCGAACAAGAGAGCAGGAGTAGGAGTAGGAGCAGGAGAGACAGGAG
CAACAGCAGACGAGGACAAAGATAAGCGCCCTACACGTTTAAGGAAGGGA
GATGGACTATCAGCAGATGCTCGCGACATGCAAACCCTCACGAGCTTGCC
GAAGGAAGTCGATCACATCGTGCTCGGGTCGGATGTCGGAGGGCTCTACA
CAGCTGCTCTCCTCGCACGGGTAGGGCACACAGTCCTTGTCCTCGAGTCA
GGCGACAGCTTGGGAAATTGTATGACGGAGATGAAAGGAGTCCAGGTCGA
TTATGGGCTTCTGAGCGTGGGTAAGCTGCAGGTTTATGACAAGATGCTCC
AAAGCGCGTACTTGGAGGGAGCACCAGCAGTGAAATGGTCAAGGGTGGGA
ACCGAAGAGAATGGATATTCATTCGACGTGGCGCGTGTGGGGAATTTAGG
CGATGTCGTGTATCGCGCGGGAAAACAGGCATTGATTGACGATCAGGTGA
TCTCGGCGCCGGGCCCTGAGAATCGGGGCAGGGTGGGGATGTTTGTGACA
AGGGTGGAATCGGTAGCGCGGGAGCAAGCGGCGTTCTGGGTGGGGAGATT
GTTCGGCCAGAAGACGGCAGGATGGATCGCGATGATATTTGGACAGGGCT
ATGGAGGGATTGGAGGACGCACAGTGCAGGAAGTTACGTCGGTGACGTTG
CCCGAGTGGGGGTCCCTGGATGTGATGAGGGGCGGGTTTCGAACTGAGAA
TCTGGGGCCAGGTGAGGTGAGTTTTGCGGCCTATGTCTCGGCATTGAGCC
AGGGAATGGAGGGGCTAAATTGGCCCCAGGGAGGGTACAGAAGCGTGGCA
CGTGCACTGGTTCCGACGATCAAGAAGGCAGGGGGAATGGTATTGACACG
GGTGAAGGTGAAAGGGATTTTGATGAGCGTAACGAAGAGGGGCGAGAAGA
AGGAGAAGGGGGGAGATACAGGTCAGACGTCCGCTGCTGCGGGCAAACGG
CGGGCTGTAGGGGTGATGTTGGAGAATGGATTGGAAATAAAATGCAGGGA
ATCGATTATTGGGTCGTCGGGGGTAGTGCCGCTCTTCACACAGTGGTTGC
CCAAGGAAGTGGCTTTGCCATTCGGTGGCGACCACTTGGAGGAGGCAAGG
CCCAGGTTGTACACCCTCTTGTTGCTCAAGGGCTCGGCAGAAGAATTGGA
TTTGCCCGCCTCTGATTACTATCAGGTGCCGACGGAGGATGGGGTGGGAG
GAGAGGTACCGGGAGGGTGGTTTCACGTGTATTTTCCTTCGGCGAAACAC
CCGTCGGGCGTGGCGGCGCCCGCTATTGGGGGGGGTGGGGGGAAGAAACA
ACAGCAGCAACATTTACCGCAGGAGCAGCTCTACAGTACTTGTGTAATTG
AGACGGAGGCGGATGACGACATTGTGGAAGCGTGCTATCGGCGGATGGAC
GGGAGCACCAGCAGTAGACCCGCTGTGCAAATCGCACCAGGACTTGCTGC
CACAGGGCCCACAGCGCCGCCCAGCCCCCCTCCTTCCCTCCCTAATGCTG
GTGTGTTTGGACCGGGACCGGGCTTGAAATACTATAAGATGAAGCAGCCT
TCGGACGCGAAAATTCGTCGATTGCAACAAATGATGATGAAACGATTGGT
GCAGTTGTACCCGCAGATAGCGGGGCAGTTTGAGGAAGAGCACGGAGGGA
TCCAGACGATTGGCCCTTTCCGGGTGGGGTTGTCCCATCGTCCTGCGCGG
TTTGTGGCACCTGGCTTGAGGACTAGGATAGCTCCTGGGGTGGAGAATGT
TTTTCTGGGAGGTGGGGATCTGGTACTTGGGACTTTTGGAGGAAGTGTGA
TGGGGGGATGGCTGGCAGCGCATTCCGCTTTGGGGTATGGAGCCGTGGAC
TTGTTGATGTTGGGACGGAGCTTGAATGAGGATTTGAAGAATGTACCGAG
AGGGAGATATGAGGAGGAGGGGGATGAAGAGGAGGAGGAGAAGGTGGTTG
CAGGGGGTGATGGGACGAAGGAGGAGTAG
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protein sequence of NO03G02250.1

>NO03G02250.1-protein ID=NO03G02250.1-protein|Name=NO03G02250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=893bp
MLSRRNPRTTTLVMTPLLFVSILAALLTTTSMLPRVTAVKLGKVSPRVWE
NLEAEGINAAAMEEAVADAAAAAAEEEEEKVSVKQAEELRRLKVEMARRE
ALDKAKDIDWKSTADAAKKERELDEKYGVWKHVILNPWFQWVMGLLDDLF
AIELMGEARMAPAAIVVLLFMLYRAKQPLSYLALAAAFFYNIHPILVGGL
TVGMKVWALRRKPKGYVPPNKRAGVGVGAGETGATADEDKDKRPTRLRKG
DGLSADARDMQTLTSLPKEVDHIVLGSDVGGLYTAALLARVGHTVLVLES
GDSLGNCMTEMKGVQVDYGLLSVGKLQVYDKMLQSAYLEGAPAVKWSRVG
TEENGYSFDVARVGNLGDVVYRAGKQALIDDQVISAPGPENRGRVGMFVT
RVESVAREQAAFWVGRLFGQKTAGWIAMIFGQGYGGIGGRTVQEVTSVTL
PEWGSLDVMRGGFRTENLGPGEVSFAAYVSALSQGMEGLNWPQGGYRSVA
RALVPTIKKAGGMVLTRVKVKGILMSVTKRGEKKEKGGDTGQTSAAAGKR
RAVGVMLENGLEIKCRESIIGSSGVVPLFTQWLPKEVALPFGGDHLEEAR
PRLYTLLLLKGSAEELDLPASDYYQVPTEDGVGGEVPGGWFHVYFPSAKH
PSGVAAPAIGGGGGKKQQQQHLPQEQLYSTCVIETEADDDIVEACYRRMD
GSTSSRPAVQIAPGLAATGPTAPPSPPPSLPNAGVFGPGPGLKYYKMKQP
SDAKIRRLQQMMMKRLVQLYPQIAGQFEEEHGGIQTIGPFRVGLSHRPAR
FVAPGLRTRIAPGVENVFLGGGDLVLGTFGGSVMGGWLAAHSALGYGAVD
LLMLGRSLNEDLKNVPRGRYEEEGDEEEEEKVVAGGDGTKEE*
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Synonyms
Publications