NO03G02220, NO03G02220 (gene) Nannochloropsis oceanica

Overview
NameNO03G02220
Unique NameNO03G02220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1665
Alignment locationchr3:656740..658404 +

Link to JBrowse

Properties
Property NameValue
DescriptionAatf protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:656740..658404 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR025160AATF
IPR012617AATF_C
Homology
BLAST of NO03G02220 vs. NCBI_GenBank
Match: EWM29678.1 (aatf protein [Nannochloropsis gaditana])

HSP 1 Score: 187.2 bits (474), Expect = 1.400e-43
Identity = 217/554 (39.17%), Postives = 250/554 (45.13%), Query Frame = 0
Query:    3 AKMKRQLLKDIAALTSFGDG--GGANGEEDVYDDGTSAFGHGKGKEERNGSSAG--GVWRVEDDEEREGGLGGVAVSRSRLRMERAMDFGEEEARYRGKKVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRQDKGGMALLLKRSRDDQRQKAEQARTERDLWNKLLEVRILLQRLLGMANRFPRGEAYEQYIDLDESGETREGFSGVASGLRGVLANLVEMRAEHAAAHQQEDPAEASQRRKRQRAQHATFVSGKVGLGSGGDPWMASQGDYQVCKERWKEVVDAAHQRATLSWAVSKKFKVVNSGLWGQVEVAAKGARAVKRSHLTLAQTKAAGLFTAGAAEKEDAGXXXXXXXXXXXXXXXXXXXXEAFDDADLYQQLLRDYIQTVGTGGDVDPAAVAAMGRSLSRRRHKKKVDTKASKGRKLRYAVHPKLEHFMFPVPMGECGIDVDRLFASLPGRRGKVVVPMAGKAEEG 553
            AK++ QLL+DIAALT+FG+G  G  +G+ED Y+DGT+A          NG   G  G W VE ++ + G   G +  RSRLRMERAMDF +E+ RYRGKKV R                                                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        LRQ+KGGMALLLKRS D+Q+ KA QAR  RD+WNKLLEVRILLQRLLGMANRFPR +AY++Y  +D SGETR  F  V+ GLRG+L  L                                                                                                                                                                QLLRDY+Q  G GG V    +A +GRS  R   KKKVDTKASKGRK+RY+VHPKLEHFMFPV    C  D +RLFASLPGR G+      G+   G
Sbjct:    2 AKVRGQLLRDIAALTTFGEGAEGYRDGDEDNYEDGTNARLAQYNNGWINGGDGGGDGTWVVEGEDGKSG--SGASTGRSRLRMERAMDFVDEDERYRGKKVLR-------------------------------------------------RALVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLEEEMEKLRQNKGGMALLLKRSNDEQQLKAAQARKHRDMWNKLLEVRILLQRLLGMANRFPRDKAYDEYCRMDGSGETRAKFKEVSRGLRGLLETL----------------------------------------------------------------------------------------------------------------------------------------------------------------QLLRDYMQ-AGAGGRV--GGLAGLGRSSGRASRKKKVDTKASKGRKIRYSVHPKLEHFMFPVD-PPCPTDRNRLFASLPGRGGRAAAAAEGEGTGG 340          
BLAST of NO03G02220 vs. NCBI_GenBank
Match: CBJ28736.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 111.7 bits (278), Expect = 7.400e-21
Identity = 113/381 (29.66%), Postives = 163/381 (42.78%), Query Frame = 0
Query:  209 RQDKGGMALLLKRSRDDQRQKAEQARTERDLWNKLLEVRILLQRLLGMANRFPRGEAYEQYIDLDES-GETREGFSGVASGLRGVLANLVEMRAEHAAAHQQEDPAEASQRRKRQRAQHATFVSG-----KVGLGSGGD----PWMASQG-----------DYQVCKERWKEVVDAAHQRATL-SWAVSKKFKVVNSGLWGQVEVA-AKGARAVKRSHLTLAQT------KAAGLFTAGAAEKE----------------DAGXXXXXXXXXXXXXXXXXXXXEAFDDADLYQQLLRDYIQTVGTGGDVDPAAVAAMGRSLSRRRHKKKVDTKASKGRKLRYAVHPKLEHFMFPVPMGECGIDVDRLFASLPGRRGKVVVP 545
            R+D GG+A         + ++A +A  +R+ W+ LLEVRILLQRL+  AN+ P       +++ DE      E  +G A GL      L  +R  H +     +            A  A  V+      KVG  +G D    P   S+G           ++  C   W +V+   H+R  L    + KKFKVVN G W Q+  + A   RA +RS +T ++T      K A    A   + +                   XXX                 E  DD +LYQ LL++++   GT G    A        + R+  KK VD KASKGRK++Y  HPK+++FMFP       ++   LFASL G  G+   P
Sbjct:  238 RRDGGGIA------GQGELRRAREALRQREWWDSLLEVRILLQRLMNAANKLPGPNELPLFLEGDEQLTALAEESAGAAQGL---ATQLSAVRRSHMSCWGIANIKSGDSGSGSGDAGKAAMVTNDDDEQKVGNDNGKDKGEGPTTISEGNAEGEEAVAATEHGSCMGWWSDVLGRWHERTQLVDPGLQKKFKVVNQGPWAQITASLADRERANRRSFMTESETSEFLGRKLAKHLDAAKGDGDAXXXXXXXXXXXXXXXXXXXXXDVVGRVRRKDGAEPLDLEVVDDRNLYQHLLKEFMDASGTAGSGYSAV------PVRRKSRKKSVDRKASKGRKIKYVTHPKMQNFMFPQEYEAPPMEPSELFASLFGGAGRTQQP 603          
BLAST of NO03G02220 vs. NCBI_GenBank
Match: XP_019024961.1 (TRAUB-domain-containing protein [Saitoella complicata NRRL Y-17804] >GAO46944.1 hypothetical protein G7K_1161-t1 [Saitoella complicata NRRL Y-17804] >ODQ53848.1 TRAUB-domain-containing protein [Saitoella complicata NRRL Y-17804])

HSP 1 Score: 111.7 bits (278), Expect = 7.400e-21
Identity = 103/345 (29.86%), Postives = 162/345 (46.96%), Query Frame = 0
Query:  208 LRQDKGGMALLLKRSRDDQRQKAEQARTERDLWNKLLEVRILLQRLLGMANRFPRGEAYEQYIDLDESGETREGFSGVASGLRGVLANLVEMRAEH-AAAHQQEDPAEASQRRKRQRAQHATFVSGKVGLGSGGDPWMASQGDYQVCKE----RWKEVVDAAHQRATLSWAVSKKFKVVNSGLWGQV-EVAAKGARAVKRSHLTLAQTKAAGLFTAGAAEKEDAGXXXXXXXXXXXXXXXXXXXXEAFDDADLYQQLLRDYIQ----TVGTGGDVDPAAVAAMGRSLSRRRHKKKVDTKASKGRKLRYAVHPKLEHFMFPVPMGECGID-VDRLFASLPGRRGKV 542
            + +++  + L + ++   + +K    +++  +++ LL+ RI LQ+ L   N FP+G+A+  ++D +ES +  +    +A  L   + NL ++R E    A   E   +A Q RKR+R          V L +    + A    +Q  +E    +W   V AA         ++KKFK VN G+  Q+ E  +   R V+R+ L  +  K  G      AE+ED                      E FDD D YQ +L++ I       G G     AA+         ++ K  VDTKASKGRKLRY VH KL+ FM P+P  +   + +D LFASL G+R +V
Sbjct:  159 MAEEQKSLVLNITQTAKAEAEKGRHVKSQMKIYDSLLDSRIKLQKGLAAVNTFPQGDAFATFVD-EESADAIKDAEALALSL---IDNLFDLRMEFMREADGMEIDGDACQSRKRKRDD-----DDSVDLNNIWSDFQALDEQFQGWQESTLTKWSNKVQAAS-----GVPLNKKFKAVNQGILAQIQETLSDKDRLVQRTRLNRSNNKILG------AEEED------KTSKDATDEHLRNFNSEIFDDTDFYQGMLKELIDRRMLDSGNGTGTQWAAIK------QPKQKKANVDTKASKGRKLRYHVHEKLQSFMAPIPTAQWHDEQIDELFASLLGQRVRV 471          
BLAST of NO03G02220 vs. NCBI_GenBank
Match: EXX59714.1 (Bfr2p [Rhizophagus irregularis DAOM 197198w] >GBC25112.1 traub family protein [Rhizophagus irregularis DAOM 181602] >PKC69139.1 TRAUB-domain-containing protein [Rhizophagus irregularis] >PKY15845.1 TRAUB-domain-containing protein [Rhizophagus irregularis] >POG75981.1 hypothetical protein GLOIN_2v1475018 [Rhizophagus irregularis DAOM 181602=DAOM 197198])

HSP 1 Score: 110.5 bits (275), Expect = 1.600e-20
Identity = 89/336 (26.49%), Postives = 158/336 (47.02%), Query Frame = 0
Query:  208 LRQDKGGMALLLKRSRDDQRQKAEQARTERDLWNKLLEVRILLQRLLGMANRFPRGEAYEQYIDLDESGETREGFSGVASGLRGVLANLVEMRAEHAAAHQQEDPAEASQRRKRQRAQHATFVSGKVGLGSGGDPWMASQGDYQVCKERWKEVVDAAHQRATLSWAVS--KKFKVVNSGLWGQVE-VAAKGARAVKRSHLTLAQTKAAGLFTAGAAEKEDAGXXXXXXXXXXXXXXXXXXXXEAFDDADLYQQLLRDYIQTVGTGGDVDPAAVAAMGRSLSRRRHKKK-VDTKASKGRKLRYAVHPKLEHFMFPVPMGECGID-VDRLFASLPGRR 539
            + +++  +   +K++  +   K +  +T+  LW+  L+ RI LQ+ + +AN FP+ + Y +++    + E+        + LR ++ +L+++R +    H+  +  E S+     R  H    +    L      W   +  Y        + +D    +  ++  +S  K+FK +N G+  Q+E +     R  KR+ L     K  G        K++                      E FDD D YQQLLR+ I++     D DP ++     ++ + + KKK VDTKASKGR+LRY VH KL++FM P+P G    D +D L++SL G++
Sbjct:  175 IEEEERNLLHKMKQNAQEDVTKGQHVKTQLGLWDTFLDTRIRLQKAVSIANSFPQSDVYSEFL----TPESELAIQETRTELRELVDSLIDLRKD--LCHENNNIKEISENVMNSRKHHLDDHNYTEYL------WKDMKELYDHFLPYRTQTIDKWSNKVQIASGISLNKRFKAINQGVNTQIEQILHDKERLTKRTQLKRNSDKILG--------KKEHDIEDPDKDVKKHDKHLSNYDVEIFDDTDFYQQLLRELIESRMIDTD-DPISLGMQWAAIRQTKQKKKQVDTKASKGRRLRYHVHEKLQNFMVPIPDGNWHEDMIDELYSSLLGKK 489          
BLAST of NO03G02220 vs. NCBI_GenBank
Match: XP_005650856.1 (TRAUB-domain-containing protein [Coccomyxa subellipsoidea C-169] >EIE26312.1 TRAUB-domain-containing protein [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 110.5 bits (275), Expect = 1.600e-20
Identity = 117/348 (33.62%), Postives = 161/348 (46.26%), Query Frame = 0
Query:  215 MALLLKRSRDDQRQKAEQARTERDLWNKLLEVRILLQRLLGMANRFPRGEAYEQYIDLDESGETREGFSGVASGLRGVLANLVEMRAE-------HAAAHQQEDPAEASQRRKRQRAQHATFVSGKVGLGSGGDPWMASQGDYQVCKERWKEV--------------VDAAHQRATL---SWAVSKKFKVVNSGLWGQV-EVAAKGARAVKRSHLTLAQTKAAGLFTAGAAEKEDAGXXXXXXXXXXXXXXXXXXXXEAFDDADLYQQLLRDYIQTVGTGGDVDPAAVAAMGRSLSRRRHKKKVDTKASKGRKLRYAVHPKLEHFMFPVPMGECGIDVDRLFASLPGR 538
            MA+  +     +R K    + +R LW ++LE+RILLQ  L  +NR  R   +     +  + E R GF G+A G    L +L+++  E        AAA   E PAEA              V GK G   G D    + GD  +   +W  +              +D  H++  L   S A+    + +N  L  QV  +      AV+R+ L  AQ +       G A      XXXXXXXXXXX         E FDD + YQQLL+++++    G  VD AAV A  +   ++R  KKVD +ASKGRKLRY V  KL HFM PV   E      +LFA+L G+
Sbjct:  128 MAITNRDRAARERAKGTAVKNQRALWERMLELRILLQSCLQASNRLVRPHMHVAACAV--APELRSGFHGLADGAAATLDSLLDLHDELLERVPDRAAAAATEPPAEA--------------VMGKTGKKRGRD---GAAGDDLLSGTKWARMNAAYGSFAPFRDASMDRWHRKTMLMTGSGALRNNLRALNQSLSSQVAALVTDSGPAVQRTQLMTAQIRP----LMGRASXXXXXXXXXXXXXXXXETVLDARDAETFDDGEFYQQLLKEFLE----GSGVDAAAVNASAQGGKKKR--KKVDRRASKGRKLRYQVMEKLVHFMTPVERAEAPTLATQLFANLFGQ 446          
BLAST of NO03G02220 vs. NCBI_GenBank
Match: PKK78683.1 (TRAUB-domain-containing protein [Rhizophagus irregularis])

HSP 1 Score: 110.5 bits (275), Expect = 1.600e-20
Identity = 89/336 (26.49%), Postives = 158/336 (47.02%), Query Frame = 0
Query:  208 LRQDKGGMALLLKRSRDDQRQKAEQARTERDLWNKLLEVRILLQRLLGMANRFPRGEAYEQYIDLDESGETREGFSGVASGLRGVLANLVEMRAEHAAAHQQEDPAEASQRRKRQRAQHATFVSGKVGLGSGGDPWMASQGDYQVCKERWKEVVDAAHQRATLSWAVS--KKFKVVNSGLWGQVE-VAAKGARAVKRSHLTLAQTKAAGLFTAGAAEKEDAGXXXXXXXXXXXXXXXXXXXXEAFDDADLYQQLLRDYIQTVGTGGDVDPAAVAAMGRSLSRRRHKKK-VDTKASKGRKLRYAVHPKLEHFMFPVPMGECGID-VDRLFASLPGRR 539
            + +++  +   +K++  +   K +  +T+  LW+  L+ RI LQ+ + +AN FP+ + Y +++    + E+        + LR ++ +L+++R +    H+  +  E S+     R  H    +    L      W   +  Y        + +D    +  ++  +S  K+FK +N G+  Q+E +     R  KR+ L     K  G        K++                      E FDD D YQQLLR+ I++     D DP ++     ++ + + KKK VDTKASKGR+LRY VH KL++FM P+P G    D +D L++SL G++
Sbjct:  160 IEEEERNLLHKMKQNAQEDVTKGQHVKTQLGLWDTFLDTRIRLQKAVSIANSFPQSDVYSEFL----TPESELAIQETRTELRELVDSLIDLRKD--LCHENNNIKEISENVMNSRKHHLDDHNYTEYL------WKDMKELYDHFLPYRTQTIDKWSNKVQIASGISLNKRFKAINQGVNTQIEQILHDKERLTKRTQLKRNSDKILG--------KKEHDIEDPDKDVKKHDKHLSNYDVEIFDDTDFYQQLLRELIESRMIDTD-DPISLGMQWAAIRQTKQKKKQVDTKASKGRRLRYHVHEKLQNFMVPIPDGNWHEDMIDELYSSLLGKK 474          
BLAST of NO03G02220 vs. NCBI_GenBank
Match: PKY45694.1 (TRAUB-domain-containing protein [Rhizophagus irregularis])

HSP 1 Score: 110.5 bits (275), Expect = 1.600e-20
Identity = 89/336 (26.49%), Postives = 158/336 (47.02%), Query Frame = 0
Query:  208 LRQDKGGMALLLKRSRDDQRQKAEQARTERDLWNKLLEVRILLQRLLGMANRFPRGEAYEQYIDLDESGETREGFSGVASGLRGVLANLVEMRAEHAAAHQQEDPAEASQRRKRQRAQHATFVSGKVGLGSGGDPWMASQGDYQVCKERWKEVVDAAHQRATLSWAVS--KKFKVVNSGLWGQVE-VAAKGARAVKRSHLTLAQTKAAGLFTAGAAEKEDAGXXXXXXXXXXXXXXXXXXXXEAFDDADLYQQLLRDYIQTVGTGGDVDPAAVAAMGRSLSRRRHKKK-VDTKASKGRKLRYAVHPKLEHFMFPVPMGECGID-VDRLFASLPGRR 539
            + +++  +   +K++  +   K +  +T+  LW+  L+ RI LQ+ + +AN FP+ + Y +++    + E+        + LR ++ +L+++R +    H+  +  E S+     R  H    +    L      W   +  Y        + +D    +  ++  +S  K+FK +N G+  Q+E +     R  KR+ L     K  G        K++                      E FDD D YQQLLR+ I++     D DP ++     ++ + + KKK VDTKASKGR+LRY VH KL++FM P+P G    D +D L++SL G++
Sbjct:  175 IEEEERNLLHKMKQNAQEDVTKGQHVKTQLGLWDTFLDTRIRLQKAVSIANSFPQSDVYSEFL----TPESELAIQETRTELRELVDSLIDLRKD--LCHENNNIKEISENVMNSRKHHLDDHNYTEYL------WKDMKELYDHFLPYRTQTIDKWSNKVQIASGISLNKRFKAINQGVNTQIEQILHDKERLTKRTQLKRNSDKILG--------KKEHDIEDPDKDVKKHDKHLSNYDVEIFDDTDFYQQLLRELIESRMIDTD-DPISLGMQWAAIRQTKQKKKQVDTKASKGRRLRYHVHEKLQNFMVPIPDGNWHEDMIDELYSSLLGKK 489          
BLAST of NO03G02220 vs. NCBI_GenBank
Match: PKC08116.1 (TRAUB-domain-containing protein [Rhizophagus irregularis])

HSP 1 Score: 110.2 bits (274), Expect = 2.100e-20
Identity = 89/325 (27.38%), Postives = 153/325 (47.08%), Query Frame = 0
Query:  219 LKRSRDDQRQKAEQARTERDLWNKLLEVRILLQRLLGMANRFPRGEAYEQYIDLDESGETREGFSGVASGLRGVLANLVEMRAEHAAAHQQEDPAEASQRRKRQRAQHATFVSGKVGLGSGGDPWMASQGDYQVCKERWKEVVDAAHQRATLSWAVS--KKFKVVNSGLWGQVE-VAAKGARAVKRSHLTLAQTKAAGLFTAGAAEKEDAGXXXXXXXXXXXXXXXXXXXXEAFDDADLYQQLLRDYIQTVGTGGDVDPAAVAAMGRSLSRRRHKKK-VDTKASKGRKLRYAVHPKLEHFMFPVPMGECGID-VDRLFASLPGRR 539
            +K++  +   K +  +T+  LW+  L+ RI LQ+ + +AN FP+ + Y +++    + E+        + LR ++ +L+++R +    H+  +  E S+     R  H    +    L      W   +  Y        + +D    +  ++  +S  K+FK +N G+  Q+E +     R  KR+ L     K  G        K++                      E FDD D YQQLLR+ I++     D DP ++     ++ + + KKK VDTKASKGR+LRY VH KL++FM P+P G    D +D L++SL G++
Sbjct:  186 MKQNAQEDVTKGQHVKTQLGLWDTFLDTRIRLQKAVSIANSFPQSDVYSEFL----TPESELAIQETRTELRELVDSLIDLRKD--LCHENNNIKEISENVMNSRKHHLDDHNYTEYL------WKDMKELYDHFLPYRTQTIDKWSNKVQIASGISLNKRFKAINQGVNTQIEQILHDKERLTKRTQLKRNSDKILG--------KKEHDIEDPDKDVKKHDKHLSNYDVEIFDDTDFYQQLLRELIESRMIDTD-DPISLGMQWAAIRQTKQKKKQVDTKASKGRRLRYHVHEKLQNFMVPIPDGNWHEDMIDELYSSLLGKK 489          
BLAST of NO03G02220 vs. NCBI_GenBank
Match: OAQ22010.1 (TRAUB-domain-containing protein [Mortierella elongata AG-77] >OAQ34160.1 TRAUB-domain-containing protein [Mortierella elongata AG-77])

HSP 1 Score: 109.8 bits (273), Expect = 2.800e-20
Identity = 95/343 (27.70%), Postives = 157/343 (45.77%), Query Frame = 0
Query:  208 LRQDKGGMALLLKRSRDDQRQKAEQARTERDLWNKLLEVRILLQRLLGMANRFPRGEAYEQYIDLDESGETREGFSGVASGL-------RGVLANLVEMRAEHAAAHQQEDPAEASQRRKRQRAQHATFVSGKVGLGSGGDPWMASQGDYQVCKERWKEVVDAAHQRATLSWAVSKKFKVVNSGLWGQV-EVAAKGARAVKRSHLTLAQTKAAGLFTAGAAEKEDAG-XXXXXXXXXXXXXXXXXXXXEAFDDADLYQQLLRDYIQTVGTGGDVDPAAVAAMGRSLSR-RRHKKKVDTKASKGRKLRYAVHPKLEHFMFPVPMGECGID-VDRLFASLPGRRG 540
            +++++  +   + +S  D  +K    + +  LW  LL+ RI LQ+ + + N FP+   Y++++  D +    E    + S +         +L N+ +++   +      D  E   R     A          GL  G   W + + +     E+W   V  A         ++KKFK +N G+  Q+ +  A   R +KR+ L  ++    G  TA   ++ED                       E FDD D YQQLLR+ I++     D DP A+     +L + ++ KK+VDTK SKGR+LRY VH KL+ FM P+P G    + ++ LF+SL GR+G
Sbjct:  215 IQREESELLKSMTKSVTDDVEKGIHVKAQMTLWETLLDTRIRLQKSVSLINTFPQPSTYDEFLTNDSAEPMEEAKHNLRSFIDTLITVRTDLLRNISDVKVPKSNKRHMSDLEEEEARNLDDDAWQTKAWKDIEGLDEG---WRSYRNN---TLEKWSNKVQIAS-----GIPLNKKFKAMNQGIMTQISQTMADKERLLKRTQLKRSEYHILG--TAPEIKEEDENDKTEKTPEVSKLDSHLSNHDEEIFDDGDFYQQLLRELIESRMVDND-DPTAMGMRWAALRQTKQTKKQVDTKGSKGRRLRYHVHEKLQSFMAPIPAGTWHEEMIEELFSSLLGRKG 543          
BLAST of NO03G02220 vs. NCBI_GenBank
Match: POY73386.1 (hypothetical protein BMF94_3723 [Rhodotorula taiwanensis])

HSP 1 Score: 107.5 bits (267), Expect = 1.400e-19
Identity = 107/354 (30.23%), Postives = 164/354 (46.33%), Query Frame = 0
Query:  210 QDKGGMALLLKRSRDDQRQKAEQARTERDLWNKLLEVRILLQRLLGMANRFP---RGEAYEQYIDLDESGETREGFSGVASGLRGVLANLVEMRAEHAAAHQQ-EDPAEASQRRKRQRAQHA--------TFVSGKVGLGSGGDPWMASQGDYQVCKERWKEVVDAAHQRATLSWAVSKKFKVVNSGLWGQVEVAAKGA----RAVKRSHLTLAQTKAAGLFTA---GAAEKEDAG---XXXXXXXXXXXXXXXXXXXXEAFDDADLYQQLLRDYIQTVGTGGDVDPAAVAAM--GRSLSR-RRHKKKVDTKASKGRKLRYAVHPKLEHFMFPVPMGECGID-VDRLFASLPGR 538
            QD+  M   LK++     +K    + +    + LLE RI LQ+ +G AN  P   +  AY Q I  D+  ET    +G++         L E+R E  +++++ E PA+    RKR+R   A          +S    L +  DP++      +    +W + V AA   A       KKFK VN     Q++ A        R V+R+ +   + K  G   A   G  E+E+                         E FDD+D YQQLLRD +++     D+D A +  +    +L+R ++ KK VDT+ASKGRK+RY VH K+++FM P+  G    + +D LFASL G+
Sbjct:  167 QDERAMVSQLKQAASADVEKGRAVKKQLAFCDSLLESRIKLQKAVGAANSLPYPSKAPAYYQAIGQDDVDETLRDLAGLSE-------ELFELRQELLSSNEKIEMPADFGVSRKRRRTSAAGDDHEYLDAMLSDLQTLETTFDPFL------RATVTKWSDKVLAASGLAA-GGKGDKKFKAVNQNAMAQIDHALSATGERERLVRRTKVRRGEGKPVGAVAAAGHGDEEEENVALTPLDGGASKPSGGAGGAKEVDDECFDDSDFYQQLLRDVVESRML--DLDDATMTQLRQATALARGKKIKKVVDTRASKGRKIRYHVHEKVQNFMIPIEAGNWHDEQIDELFASLLGK 504          
The following BLAST results are available for this feature:
BLAST of NO03G02220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29678.11.400e-4339.17aatf protein [Nannochloropsis gaditana][more]
CBJ28736.17.400e-2129.66conserved unknown protein [Ectocarpus siliculosus][more]
XP_019024961.17.400e-2129.86TRAUB-domain-containing protein [Saitoella complic... [more]
EXX59714.11.600e-2026.49Bfr2p [Rhizophagus irregularis DAOM 197198w] >GBC2... [more]
XP_005650856.11.600e-2033.62TRAUB-domain-containing protein [Coccomyxa subelli... [more]
PKK78683.11.600e-2026.49TRAUB-domain-containing protein [Rhizophagus irreg... [more]
PKY45694.11.600e-2026.49TRAUB-domain-containing protein [Rhizophagus irreg... [more]
PKC08116.12.100e-2027.38TRAUB-domain-containing protein [Rhizophagus irreg... [more]
OAQ22010.12.800e-2027.70TRAUB-domain-containing protein [Mortierella elong... [more]
POY73386.11.400e-1930.23hypothetical protein BMF94_3723 [Rhodotorula taiwa... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL067nonsL067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR001ncniR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR049ngnoR049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005666NSK005666Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G02220.1NO03G02220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572013gene_1408Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100299g1gene961Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G02220.1NO03G02220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G02220 ID=NO03G02220|Name=NO03G02220|organism=Nannochloropsis oceanica|type=gene|length=1665bp
ATGGCCGCCAAGATGAAGCGCCAGTTGCTCAAGGATATTGCGGCCTTGAC
GAGCTTTGGTGACGGTGGGGGTGCGAATGGCGAGGAGGATGTCTACGACG
ACGGGACTAGCGCCTTCGGTCACGGCAAAGGCAAAGAAGAAAGGAACGGC
AGCAGCGCCGGTGGTGTTTGGCGCGTCGAAGACGATGAGGAAAGGGAGGG
GGGTTTGGGAGGGGTTGCCGTGAGTCGGTCGAGGCTGCGGATGGAGCGGG
CGATGGATTTTGGGGAGGAGGAGGCGCGGTACCGGGGGAAGAAGGTCTCG
CGACGGGCTCTGCTCGCGGACGATAATGAAGAGGATGAGGAGGAGGAGGA
AAGAAGAGAAGTTAGTGATGACAAGGAGGAAGAAAGTGAGAAGGAGGATG
GGGAGAAAGAGGTCGAGGAGAAAGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTAGCCTCCGAGTCGGGATC
TGGCTCTCAAGAAGACGAAGACAAAGACGAGGACGAGGTCGATGACAGCG
ACGACGACACCGACAGTGACGGTCGTCATGACGAAGAAGAGGAACTCACG
CTTGAGGAGGAGATGGAGCAGCTCCGGCAGGACAAGGGTGGGATGGCTTT
ACTACTCAAGCGGTCCCGGGACGATCAACGACAAAAGGCAGAGCAAGCAC
GAACGGAACGCGACCTGTGGAACAAGCTCTTGGAAGTCCGCATCTTGTTG
CAACGCTTGCTAGGAATGGCGAATCGTTTCCCGCGTGGGGAGGCGTACGA
GCAATATATTGATTTGGACGAGAGTGGGGAGACTCGAGAAGGCTTCTCTG
GAGTGGCCTCGGGGCTCCGGGGTGTCCTAGCTAACCTAGTAGAGATGCGC
GCGGAACACGCGGCAGCGCACCAGCAGGAAGATCCGGCCGAAGCCAGTCA
ACGACGAAAACGACAACGGGCGCAGCATGCGACGTTTGTGAGTGGGAAGG
TCGGGCTGGGGAGTGGGGGGGATCCATGGATGGCATCACAGGGGGATTAT
CAAGTATGTAAGGAGCGGTGGAAGGAGGTGGTGGATGCAGCACACCAACG
TGCGACGTTATCTTGGGCAGTGTCGAAGAAGTTCAAGGTGGTCAATTCGG
GTCTATGGGGGCAGGTGGAGGTGGCGGCGAAGGGAGCGAGGGCGGTGAAA
CGCTCCCATTTGACACTGGCTCAGACGAAGGCCGCCGGGCTGTTTACTGC
AGGTGCTGCTGAGAAGGAGGACGCGGGCGAGGGGGCGAAAGAGGGGGAAA
TGGAGGAGGGAAATGAGGGAAACGGGGAGGTGGACTTGGAGGCGTTTGAC
GATGCGGATCTGTACCAGCAACTGTTGAGGGATTACATACAAACAGTCGG
CACCGGGGGCGATGTGGACCCTGCTGCTGTTGCTGCCATGGGGCGATCCT
TGTCGAGGAGACGCCATAAAAAGAAGGTCGATACCAAGGCGAGTAAAGGG
AGGAAGTTGAGGTATGCAGTGCACCCCAAGTTGGAGCATTTTATGTTCCC
AGTGCCCATGGGGGAGTGCGGGATAGATGTGGATAGACTGTTTGCCTCGC
TGCCCGGACGGAGGGGGAAGGTGGTGGTGCCCATGGCGGGGAAGGCCGAG
GAAGGGATAGACTGA
back to top

protein sequence of NO03G02220.1

>NO03G02220.1-protein ID=NO03G02220.1-protein|Name=NO03G02220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=555bp
MAAKMKRQLLKDIAALTSFGDGGGANGEEDVYDDGTSAFGHGKGKEERNG
SSAGGVWRVEDDEEREGGLGGVAVSRSRLRMERAMDFGEEEARYRGKKVS
RRALLADDNEEDEEEEERREVSDDKEEESEKEDGEKEVEEKEEEEEEEEE
EEEEEEEEEEVASESGSGSQEDEDKDEDEVDDSDDDTDSDGRHDEEEELT
LEEEMEQLRQDKGGMALLLKRSRDDQRQKAEQARTERDLWNKLLEVRILL
QRLLGMANRFPRGEAYEQYIDLDESGETREGFSGVASGLRGVLANLVEMR
AEHAAAHQQEDPAEASQRRKRQRAQHATFVSGKVGLGSGGDPWMASQGDY
QVCKERWKEVVDAAHQRATLSWAVSKKFKVVNSGLWGQVEVAAKGARAVK
RSHLTLAQTKAAGLFTAGAAEKEDAGEGAKEGEMEEGNEGNGEVDLEAFD
DADLYQQLLRDYIQTVGTGGDVDPAAVAAMGRSLSRRRHKKKVDTKASKG
RKLRYAVHPKLEHFMFPVPMGECGIDVDRLFASLPGRRGKVVVPMAGKAE
EGID*
back to top
Synonyms
Publications