NO03G02100, NO03G02100 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO03G02100 vs. NCBI_GenBank
Match: EWM29693.1 (selenium binding protein [Nannochloropsis gaditana]) HSP 1 Score: 129.0 bits (323), Expect = 1.300e-26 Identity = 62/75 (82.67%), Postives = 66/75 (88.00%), Query Frame = 0 Query: 77 VKTIMVEACKQCQCFKKRFEILEKATKALKPGLTFVLNAEKPTKGVFIVRTDKGEVLWSMTGLTRPFQPLKAVDF 152 V +I+VEACKQCQCFKKR EILE+ K LKP L FVLN E+PTKGVFIVRTD GEVLWSMTGLTRPFQPLKAVDF Sbjct: 73 VSSIVVEACKQCQCFKKRAEILEQHLKVLKPELKFVLNPERPTKGVFIVRTDTGEVLWSMTGLTRPFQPLKAVDF 147
BLAST of NO03G02100 vs. NCBI_GenBank
Match: XP_008802752.1 (PREDICTED: uncharacterized protein LOC103716503 [Phoenix dactylifera]) HSP 1 Score: 82.4 bits (202), Expect = 1.400e-12 Identity = 36/85 (42.35%), Postives = 57/85 (67.06%), Query Frame = 0 Query: 78 KTIMVEACKQCQCFKKRFEILEKATKALKPGLTFVLNAEKPTKGVFIVRTDKGEVLWSMTGLTRPFQPLKAVDFELVAKELVDKL 163 KTI+VEACKQC FK R ++++ + PG++ +N EKP +G F +R + GEV S+ + RPF P+K +D E V +++V+K+ Sbjct: 99 KTIIVEACKQCTSFKTRANMVKEGLEKAVPGISVSVNPEKPRRGCFEIRKESGEVFVSLLNMPRPFTPMKKLDMEKVIEDIVEKI 183
BLAST of NO03G02100 vs. NCBI_GenBank
Match: XP_020243674.1 (selenoprotein H-like, partial [Asparagus officinalis]) HSP 1 Score: 80.1 bits (196), Expect = 7.000e-12 Identity = 35/83 (42.17%), Postives = 55/83 (66.27%), Query Frame = 0 Query: 80 IMVEACKQCQCFKKRFEILEKATKALKPGLTFVLNAEKPTKGVFIVRTDKGEVLWSMTGLTRPFQPLKAVDFELVAKELVDKL 163 I++EACKQC FK R I+++ ++ PG+ +N EKP +G F VR GE+ S+ GL RPF P+K +D + V +++V+K+ Sbjct: 38 IVIEACKQCNSFKTRANIVKEGLESAIPGIDVTINPEKPRRGCFEVRKASGEIFISLLGLKRPFTPMKNLDMDEVVEDIVNKI 120
BLAST of NO03G02100 vs. NCBI_GenBank
Match: XP_009402262.1 (PREDICTED: selenoprotein H [Musa acuminata subsp. malaccensis]) HSP 1 Score: 78.6 bits (192), Expect = 2.000e-11 Identity = 32/87 (36.78%), Postives = 56/87 (64.37%), Query Frame = 0 Query: 76 AVKTIMVEACKQCQCFKKRFEILEKATKALKPGLTFVLNAEKPTKGVFIVRTDKGEVLWSMTGLTRPFQPLKAVDFELVAKELVDKL 163 A KTI++EACKQC FK R +++ ++ PG+ +N +KP +G F +R + G+V S+ + RPF P+K +D + V ++++ K+ Sbjct: 94 AAKTIIIEACKQCTSFKTRAVKVKEGLESAVPGIVVAVNPDKPRRGCFEIREENGQVFVSLLNMPRPFTPMKKLDMDAVVEDIIKKI 180
BLAST of NO03G02100 vs. NCBI_GenBank
Match: XP_006371804.1 (uncharacterized protein KIAA1211 [Populus trichocarpa] >PNS22607.1 hypothetical protein POPTR_T130400v3 [Populus trichocarpa]) HSP 1 Score: 77.4 bits (189), Expect = 4.500e-11 Identity = 34/85 (40.00%), Postives = 55/85 (64.71%), Query Frame = 0 Query: 78 KTIMVEACKQCQCFKKRFEILEKATKALKPGLTFVLNAEKPTKGVFIVRTDKGEVLWSMTGLTRPFQPLKAVDFELVAKELVDKL 163 KTI++E CKQC FK R ++ + + PG++ +LN EKP +G F +R + GE S+ + RPF PLKA+D + V +++D++ Sbjct: 118 KTIVIEHCKQCNAFKTRAIQVKDSLLSAFPGISVLLNPEKPRRGCFEIREEGGETFISLQNMKRPFPPLKALDMDRVISDIIDRV 202
BLAST of NO03G02100 vs. NCBI_GenBank
Match: XP_010922346.1 (PREDICTED: selenoprotein H [Elaeis guineensis]) HSP 1 Score: 77.4 bits (189), Expect = 4.500e-11 Identity = 34/85 (40.00%), Postives = 54/85 (63.53%), Query Frame = 0 Query: 78 KTIMVEACKQCQCFKKRFEILEKATKALKPGLTFVLNAEKPTKGVFIVRTDKGEVLWSMTGLTRPFQPLKAVDFELVAKELVDKL 163 KTI+VEACKQC FK R ++++ + P ++ +N EKP +G F +R + GEV S+ + RPF P+K +D E V +++ K+ Sbjct: 99 KTIIVEACKQCNSFKTRANMVKEGLEKAVPDISVSVNPEKPRRGCFEIRKESGEVFVSLLNMPRPFTPMKKLDMEKVIEDIAKKI 183
BLAST of NO03G02100 vs. NCBI_GenBank
Match: XP_006371848.2 (LOW QUALITY PROTEIN: helicase SWR1 [Populus trichocarpa]) HSP 1 Score: 77.4 bits (189), Expect = 4.500e-11 Identity = 34/85 (40.00%), Postives = 54/85 (63.53%), Query Frame = 0 Query: 78 KTIMVEACKQCQCFKKRFEILEKATKALKPGLTFVLNAEKPTKGVFIVRTDKGEVLWSMTGLTRPFQPLKAVDFELVAKELVDKL 163 KTI++E CKQC FK R ++ + PG++ +LN EKP +G F +R + GE S+ + RPF PLKA+D + V +++D++ Sbjct: 118 KTIVIEHCKQCNAFKTRAIQVKDGLLSAFPGISVLLNPEKPRRGCFEIREEGGETFISLQNMKRPFSPLKALDMDRVISDIIDRV 202
BLAST of NO03G02100 vs. NCBI_GenBank
Match: XP_011045029.1 (PREDICTED: uncharacterized protein LOC105140055 [Populus euphratica]) HSP 1 Score: 77.0 bits (188), Expect = 5.900e-11 Identity = 34/85 (40.00%), Postives = 54/85 (63.53%), Query Frame = 0 Query: 78 KTIMVEACKQCQCFKKRFEILEKATKALKPGLTFVLNAEKPTKGVFIVRTDKGEVLWSMTGLTRPFQPLKAVDFELVAKELVDKL 163 KTI++E CKQC FK R ++ + PG++ +LN EKP +G F +R + GE S+ + RPF PLKA+D + V +++D++ Sbjct: 113 KTIVIEHCKQCNAFKTRAIQVKDGLLSAFPGISVLLNPEKPRRGCFEIREEGGETFISLQNMKRPFPPLKALDMDQVISDIIDRV 197
BLAST of NO03G02100 vs. NCBI_GenBank
Match: XP_011015271.1 (PREDICTED: selenoprotein H-like [Populus euphratica]) HSP 1 Score: 77.0 bits (188), Expect = 5.900e-11 Identity = 34/85 (40.00%), Postives = 54/85 (63.53%), Query Frame = 0 Query: 78 KTIMVEACKQCQCFKKRFEILEKATKALKPGLTFVLNAEKPTKGVFIVRTDKGEVLWSMTGLTRPFQPLKAVDFELVAKELVDKL 163 KTI++E CKQC FK R ++ + PG++ +LN EKP +G F +R + GE S+ + RPF PLKA+D + V +++D++ Sbjct: 118 KTIVIEHCKQCNAFKTRAIQVKDGLLSAFPGISVLLNPEKPRRGCFEIREEGGETFISLQNMKRPFPPLKALDMDQVISDIIDRV 202
BLAST of NO03G02100 vs. NCBI_GenBank
Match: OAY65970.1 (hypothetical protein ACMD2_12407 [Ananas comosus]) HSP 1 Score: 76.6 bits (187), Expect = 7.700e-11 Identity = 37/87 (42.53%), Postives = 55/87 (63.22%), Query Frame = 0 Query: 76 AVKTIMVEACKQCQCFKKRFEILEKATKALKPGLTFVLNAEKPTKGVFIVRTDKGEVLWSMTGLTRPFQPLKAVDFELVAKELVDKL 163 A KTI+VEACKQC FK R ++ ++ PG+T +N EKP +G F +R D GEV S+ + RPF+ +K +D + V ++V K+ Sbjct: 90 ASKTIIVEACKQCNSFKTRAIKVKDGLESAVPGVTVTINPEKPRRGCFEIREDGGEVFVSLLDMPRPFKLMKNLDMDEVIVDIVKKI 176 The following BLAST results are available for this feature:
BLAST of NO03G02100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G02100 ID=NO03G02100|Name=NO03G02100|organism=Nannochloropsis oceanica|type=gene|length=1196bpback to top protein sequence of NO03G02100.1 >NO03G02100.1-protein ID=NO03G02100.1-protein|Name=NO03G02100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=163bpback to top Synonyms
Publications
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