NO03G02080, NO03G02080 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G02080 vs. NCBI_GenBank
Match: EWM29646.1 (protein mis18-alpha [Nannochloropsis gaditana]) HSP 1 Score: 244.6 bits (623), Expect = 3.100e-61 Identity = 132/200 (66.00%), Postives = 140/200 (70.00%), Query Frame = 0 Query: 43 CRRIVGDSLGLTSADEDLRHITLHGACGIVRGPCPRTSEEGKDLGSTFHELFCEGCNALLGKVYLTTPAPLDGARNLFTLSTDALESFELGNYDHTCELPAHLMPTPPAASREGAEIXXXXXXXXXXXHAAMQLELTKVQNMMLVFHDRISSLERALKEATIGAGATDWERKGGGDR---------ENVGAVGNKFKRKK 234 CRRIVGDSLGL+SADE+LRHITL GACGIVRGPC RTSEEG D GSTFHELFCEGC+ LLGKVYLTTP LDGARNLFTLSTDALESFELG YDH CE+P M P +S G AMQ+EL KVQNMMLVFHDRIS LERALK T+GA R GGG R EN A G FKR+K Sbjct: 34 CRRIVGDSLGLSSADEELRHITLRGACGIVRGPCTRTSEEGNDRGSTFHELFCEGCSTLLGKVYLTTPPRLDGARNLFTLSTDALESFELGTYDHVCEVPQPAMAAPIPSSECGES---------KTSIEAMQMELVKVQNMMLVFHDRISGLERALKTGTVGA------RTGGGTRRGAWGVDGTENTAAGGPTFKRRK 218
BLAST of NO03G02080 vs. NCBI_GenBank
Match: GAQ89502.1 (hypothetical protein KFL_005300060 [Klebsormidium nitens]) HSP 1 Score: 104.4 bits (259), Expect = 5.000e-19 Identity = 69/180 (38.33%), Postives = 96/180 (53.33%), Query Frame = 0 Query: 43 CRRIVGDSLGLTSADEDLRHITLHGACGIV-RGPCPRTSEEGKDLGSTFHELFCEGCNALLGKVYLTTPAPLDGARNLFTLSTDALESFELGNYDHTCELPAHLMPTPPA---ASREGAEIXXXXXXXXXXXHAAMQLELTKVQNMMLVFHDRISSLERALKEATIGAGATDW-ERKGGG 218 C I+GDSL L + DE+LR ITL GA IV PRT EEGK GSTF + C+ C +G V++TTP LDG R+L +L + S+ LG+ + P + P PPA A+I M+ EL KV+NM+L+ +R+ LE A ++ AG + +R+G G Sbjct: 17 CNAILGDSLSLVATDEELRTITLRGASSIVILEEQPRTYEEGKAAGSTFLTIKCKSCRTDVGGVFITTPRNLDGIRDLLSLDAQKISSYALGSPEVLASAP-NDAPAPPAILDPFTSSAKI------------LRMESELLKVENMILLHSERLDQLEGAGRDLPSTAGDEETNDRRGEG 183
BLAST of NO03G02080 vs. NCBI_GenBank
Match: OWZ01126.1 (hypothetical protein PHMEG_00027549 [Phytophthora megakarya]) HSP 1 Score: 98.2 bits (243), Expect = 3.600e-17 Identity = 53/154 (34.42%), Postives = 79/154 (51.30%), Query Frame = 0 Query: 43 CRRIVGDSLGLTSADEDLRHITLHGACGIVRGPCPRTSEEGKDLGSTFHELFCEGCNALLGKVYLTTPAPLDGARNLFTLSTDALESFELGNYDHTCELPAHLMPTPPAASREGAEIXXXXXXXXXXXHAAMQLELTKVQNMMLVFHDRISSLE 197 CR I GDS + E L ITL + P +T+ G D GS+++EL C C +LG+ YLTTP LDG R+LF+ ST+A+ S+ LG E M P AA + + AA++ E+ KV+ +++ +R++ LE Sbjct: 81 CRAIFGDSYAFVCSTEQLWLITLSHVTNVTLSPEVQTANRGLDAGSSYYELLCHNCQTVLGRKYLTTPVALDGIRDLFSFSTEAITSYTLGEPMQQTEGETQKMKQPVAACHDTMQ----KLATDRDEVAALRREMEKVKGLLVTVDERLAHLE 230
BLAST of NO03G02080 vs. NCBI_GenBank
Match: XP_009531484.1 (hypothetical protein PHYSODRAFT_511864 [Phytophthora sojae] >EGZ14055.1 hypothetical protein PHYSODRAFT_511864 [Phytophthora sojae]) HSP 1 Score: 97.8 bits (242), Expect = 4.700e-17 Identity = 56/156 (35.90%), Postives = 80/156 (51.28%), Query Frame = 0 Query: 43 CRRIVGDSLGLTSADEDLRHITLHGACGIVRGPCPRTSEEGKDLGSTFHELFCEGCNALLGKVYLTTPAPLDGARNLFTLSTDALESFELGNYDHTCELPAHLMPTPPAASREGAEIXXXXXXXXXXXHAAMQLELTKVQNMMLVFHDRISSLERA 199 CR I GDS + EDL +TL + P +T+ G D GS+F+EL C C A+LG+ YLTTP LDG R+LF+ ST+A+ S+ LG+ E A AA+ A ++ E+ KV+ +M+ DR++ LE A Sbjct: 104 CRSIFGDSYAFVCSTEDLWLVTLSHVTNVALSPEVQTANTGLDAGSSFYELLCHNCQAVLGRKYLTTPVALDGIRDLFSFSTEAITSYTLGDPMQQSEDAADQQMLQAAAA---CNDTMQKLAADRSELARLKDEMEKVKGLMVTVDDRLAHLEGA 256
BLAST of NO03G02080 vs. NCBI_GenBank
Match: EXX55110.1 (hypothetical protein RirG_228310 [Rhizophagus irregularis DAOM 197198w] >EXX55111.1 hypothetical protein RirG_228310 [Rhizophagus irregularis DAOM 197198w] >GBC42343.1 Kinetochore protein Mis18 [Rhizophagus irregularis DAOM 181602] >PKC72345.1 hypothetical protein RhiirA1_411947 [Rhizophagus irregularis] >PKK71569.1 hypothetical protein RhiirC2_744413 [Rhizophagus irregularis] >PKY40564.1 hypothetical protein RhiirA4_394851 [Rhizophagus irregularis] >POG65633.1 hypothetical protein GLOIN_2v1663989 [Rhizophagus irregularis DAOM 181602=DAOM 197198]) HSP 1 Score: 95.5 bits (236), Expect = 2.300e-16 Identity = 52/158 (32.91%), Postives = 83/158 (52.53%), Query Frame = 0 Query: 43 CRRIVGDSLGLTSADEDLRHITLHGACGIVR-GPCPRTSEEGKDLGSTFHELFCEGCNALLGKVYLTTPAPLDGARNLFTLSTDALESFELGNYDHTCELPAHLMPTPPAASREGAEIXXXXXXXXXXXHAAMQLELTKVQNMMLVFHDRISSLERAL 200 CR IVGDS +AD DL + L+ +R G S EG D+GST+ ++C GCN LGKV+ TTP LD R+L+TL+ D + ++LG++ P + P + + Q+ + K+++M+L+ ++RI++LE L Sbjct: 34 CRLIVGDSFAFVTADRDLNSVVLYAKPHNIRVGTDLLWSREGIDIGSTYIMIYCNGCNLTLGKVWRTTPRKLDYIRDLYTLNLDCVMIYQLGDFIDPNSTPTDIHTLPSSRMQ--------------------QISINKLKDMILILNERITTLEHTL 171
BLAST of NO03G02080 vs. NCBI_GenBank
Match: PKC15602.1 (hypothetical protein RhiirA5_348893 [Rhizophagus irregularis] >PKY16443.1 hypothetical protein RhiirB3_402896 [Rhizophagus irregularis]) HSP 1 Score: 95.5 bits (236), Expect = 2.300e-16 Identity = 52/158 (32.91%), Postives = 83/158 (52.53%), Query Frame = 0 Query: 43 CRRIVGDSLGLTSADEDLRHITLHGACGIVR-GPCPRTSEEGKDLGSTFHELFCEGCNALLGKVYLTTPAPLDGARNLFTLSTDALESFELGNYDHTCELPAHLMPTPPAASREGAEIXXXXXXXXXXXHAAMQLELTKVQNMMLVFHDRISSLERAL 200 CR IVGDS +AD DL + L+ +R G S EG D+GST+ ++C GCN LGKV+ TTP LD R+L+TL+ D + ++LG++ P + P + + Q+ + K+++M+L+ ++RI++LE L Sbjct: 34 CRLIVGDSFAFVTADRDLNSVVLYAKPHNIRVGTDLLWSREGIDIGSTYIMIYCNGCNLTLGKVWRTTPRKLDYIRDLYTLNLDCVMIYQLGDFIDPNSTPTDIHTLPSSRMQ--------------------QISINKLKDMILILNERITTLEHTL 171
BLAST of NO03G02080 vs. NCBI_GenBank
Match: KUF78328.1 (Kinetochore protein mis18 [Phytophthora nicotianae] >KUF87825.1 hypothetical protein AM588_10001614 [Phytophthora nicotianae]) HSP 1 Score: 95.1 bits (235), Expect = 3.000e-16 Identity = 59/173 (34.10%), Postives = 81/173 (46.82%), Query Frame = 0 Query: 43 CRRIVGDSLGLTSADEDLRHITLHGACGIVRGPCPRTSEEGKDLGSTFHELFCEGCNALLGKVYLTTPAPLDGARNLFTLSTDALESFELGNYDHTCELPAHLMPTPPAASREGAEIXXXXXXXXXXXHAAMQL-------------ELTKVQNMMLVFHDRISSLERALKEA 203 CR I GDS + E L +TL + P +T+ G D GS+++EL C C A+LG+ YLTTP LDG R+LF+ ST+A+ S+ LG+ P EG E H AMQ EL KV+ +M+ DR++ LE A E+ Sbjct: 100 CRSIFGDSYAFVCSTEQLWLVTLSHVTNVALAPEVQTANTGLDAGSSYYELLCHNCQAVLGRKYLTTPVVLDGIRDLFSFSTEAITSYTLGD---------------PMQKGEGGE-DEWMKQAAVVCHEAMQKLAVDRSEVARLRDELEKVKGLMVTVDDRLAHLEGAAPES 256
BLAST of NO03G02080 vs. NCBI_GenBank
Match: ETK84723.1 (hypothetical protein L915_10340 [Phytophthora parasitica]) HSP 1 Score: 94.4 bits (233), Expect = 5.100e-16 Identity = 58/173 (33.53%), Postives = 81/173 (46.82%), Query Frame = 0 Query: 43 CRRIVGDSLGLTSADEDLRHITLHGACGIVRGPCPRTSEEGKDLGSTFHELFCEGCNALLGKVYLTTPAPLDGARNLFTLSTDALESFELGNYDHTCELPAHLMPTPPAASREGAEIXXXXXXXXXXXHAAMQL-------------ELTKVQNMMLVFHDRISSLERALKEA 203 CR I GDS + E L +TL + P +T+ G D GS+++EL C C A+LG+ YLTTP LDG R+LF+ ST+A+ S+ LG+ P EG E H AMQ E+ KV+ +M+ DR++ LE A E+ Sbjct: 145 CRSIFGDSYAFVCSTEQLWLVTLSHVTNVALAPEVQTANTGLDAGSSYYELLCHNCQAVLGRKYLTTPVVLDGIRDLFSFSTEAITSYTLGD---------------PMQKGEGGE-DEWMKQAAVVCHEAMQKLAVDRSEVARLRDEMEKVKGLMVTVDDRLAHLEGAAPES 301
BLAST of NO03G02080 vs. NCBI_GenBank
Match: XP_008893620.1 (hypothetical protein PPTG_01977 [Phytophthora parasitica INRA-310] >ETL38156.1 hypothetical protein L916_10240 [Phytophthora parasitica] >ETL91262.1 hypothetical protein L917_10174 [Phytophthora parasitica] >ETN21903.1 hypothetical protein PPTG_01977 [Phytophthora parasitica INRA-310] >ETO73366.1 hypothetical protein F444_10681 [Phytophthora parasitica P1976] >ETP14549.1 hypothetical protein F441_10523 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 94.4 bits (233), Expect = 5.100e-16 Identity = 58/173 (33.53%), Postives = 81/173 (46.82%), Query Frame = 0 Query: 43 CRRIVGDSLGLTSADEDLRHITLHGACGIVRGPCPRTSEEGKDLGSTFHELFCEGCNALLGKVYLTTPAPLDGARNLFTLSTDALESFELGNYDHTCELPAHLMPTPPAASREGAEIXXXXXXXXXXXHAAMQL-------------ELTKVQNMMLVFHDRISSLERALKEA 203 CR I GDS + E L +TL + P +T+ G D GS+++EL C C A+LG+ YLTTP LDG R+LF+ ST+A+ S+ LG+ P EG E H AMQ E+ KV+ +M+ DR++ LE A E+ Sbjct: 100 CRSIFGDSYAFVCSTEQLWLVTLSHVTNVALAPEVQTANTGLDAGSSYYELLCHNCQAVLGRKYLTTPVVLDGIRDLFSFSTEAITSYTLGD---------------PMQKGEGGE-DEWMKQAAVVCHEAMQKLAVDRSEVARLRDEMEKVKGLMVTVDDRLAHLEGAAPES 256
BLAST of NO03G02080 vs. NCBI_GenBank
Match: ETP42629.1 (hypothetical protein F442_10476 [Phytophthora parasitica P10297]) HSP 1 Score: 94.4 bits (233), Expect = 5.100e-16 Identity = 58/173 (33.53%), Postives = 81/173 (46.82%), Query Frame = 0 Query: 43 CRRIVGDSLGLTSADEDLRHITLHGACGIVRGPCPRTSEEGKDLGSTFHELFCEGCNALLGKVYLTTPAPLDGARNLFTLSTDALESFELGNYDHTCELPAHLMPTPPAASREGAEIXXXXXXXXXXXHAAMQL-------------ELTKVQNMMLVFHDRISSLERALKEA 203 CR I GDS + E L +TL + P +T+ G D GS+++EL C C A+LG+ YLTTP LDG R+LF+ ST+A+ S+ LG+ P EG E H AMQ E+ KV+ +M+ DR++ LE A E+ Sbjct: 100 CRSIFGDSYAFVCSTEQLWLVTLSHVTNVALAPEVQTANTGLDAGSSYYELLCHNCQAVLGRKYLTTPVVLDGIRDLFSFSTEAITSYTLGD---------------PMQKGEGGE-DEWMKQAAVVCHEAMQKLAVDRSEVARLRDEMEKVKGLMVTVDDRLAHLEGAAPES 256 The following BLAST results are available for this feature:
BLAST of NO03G02080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G02080 ID=NO03G02080|Name=NO03G02080|organism=Nannochloropsis oceanica|type=gene|length=702bpback to top protein sequence of NO03G02080.1 >NO03G02080.1-protein ID=NO03G02080.1-protein|Name=NO03G02080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=234bpback to top Synonyms
Publications
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