NO03G02070, NO03G02070 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G02070 vs. NCBI_GenBank
Match: EWM29643.1 (mbr-related protein [Nannochloropsis gaditana]) HSP 1 Score: 411.0 bits (1055), Expect = 5.300e-111 Identity = 241/439 (54.90%), Postives = 281/439 (64.01%), Query Frame = 0 Query: 105 EEEDDLVGTARLSYGSDGQKGLRMDVDLDVSELTSHLGPAAKPLVAVAKAIQQTIFYTAPMLALAGLITQIAGISCSRYTKTQADKKDGEKKGSINYKGNRSTTADWKQQ--------------------------------QKQQDAKAAVVAKTNKKGASPLSSLWAFLKWPXXXXXXXXXXXXXXXXXXXXXXXXXXKQAAHVCNVKGGAV--------SMR-----ETLDWNAFGILTTRAAGQWSSLVIAGIVLGKLLNHAAASTKFDPTLLLSLDIFTAFAAIFLSENVGFLRTKMDMSWYQRVLRKPTWTPKPIVFPLVWIPLKLLQTAALTVVWRLVERNALAVPVLLFLLHLTLGDLWNVVFFGEKRIGYGLSVMYAFYASLAASCYSFYSVRPRAAYLLVPTAVWVFVATSLNYSIWLMNGQPTRFPTK 499 EE++DLVG AR+SYGSDGQKGLRMDVDLDV+ELTSHLGPAAKPLVAVA+AIQ TIFYTAP+LALAGL+TQIAGI+CSRYTKTQADKK N +G S T D K+ +AK K AS +S+W +LK + A V KGGA+ S R E LDWNAF +L+ RAA QW+ LV +G+ + A AS K +P LL+SLD+FTA +A+FLSE VGFLRT+MDM WY RVL+KPTWTP+PIVFPLVW+PLKLLQTAAL +VWRL++R+AL VPV+LFLLHLTLGDLWN+VFFGEKRIG+GLSVMYAFYASLAASC VF+ATSLNYSIWL+NG PTRFPTK Sbjct: 2 EEDEDLVGAARVSYGSDGQKGLRMDVDLDVNELTSHLGPAAKPLVAVARAIQSTIFYTAPVLALAGLLTQIAGITCSRYTKTQADKKS-------NKQGKASRTRDPKKSTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKAKKPHASS-TSIWGYLK---------------RAFSSISPGKSKDNKLAFVTRTKGGALLGWNTGGPSTRKSKDGEILDWNAFTVLSLRAACQWALLVAVAAAVGRGVEAAGASRKLNPRLLISLDVFTASSAVFLSEKVGFLRTQMDMGWYHRVLKKPTWTPRPIVFPLVWVPLKLLQTAALVLVWRLLDRDALNVPVVLFLLHLTLGDLWNLVFFGEKRIGFGLSVMYAFYASLAASCXXXXXXXXXXXXXXXXXXXXVFIATSLNYSIWLLNGTPTRFPTK 417
BLAST of NO03G02070 vs. NCBI_GenBank
Match: KXZ56562.1 (hypothetical protein GPECTOR_1g504 [Gonium pectorale]) HSP 1 Score: 126.7 bits (317), Expect = 2.000e-25 Identity = 71/158 (44.94%), Postives = 99/158 (62.66%), Query Frame = 0 Query: 333 PTLLLSLDIFTAFAAIFLSENVGFLRTKMDMSWYQRVLRKPTWTPKPIVFPLVWIPLKLLQTAALTVVW-RLVERNALAVPVLLFLLHLTLGDLWNVVFFGEKRIGYGLSVMYAFYASLAASCYSFYSVRPRAAYLLVPTAVWVFVATSLNYSIWLMN 490 PT + + + A +F V L D +WY + L+KP WTP VFPLVWIPLKL+Q+ AL +VW + ALA P+ +H+ LG+ WNVVFFG++++ L MY F+AS+A + +FY V P AAYL+VPT +WV +AT LN+ I +N Sbjct: 13 PTAQNAASLVGSAAVVF---GVQRLVPTFDPTWY-KALKKPKWTPPNYVFPLVWIPLKLMQSVALWLVWTKAPSARALAFPLTAMAVHMGLGNWWNVVFFGQRKLKESLPWMYTFWASIAVTAAAFYPVSPAAAYLMVPTQIWVSIATKLNWDIVKLN 166
BLAST of NO03G02070 vs. NCBI_GenBank
Match: XP_001703277.1 (TspO/MBR-related protein [Chlamydomonas reinhardtii] >PNW85191.1 hypothetical protein CHLRE_03g175500v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 122.9 bits (307), Expect = 2.900e-24 Identity = 65/130 (50.00%), Postives = 92/130 (70.77%), Query Frame = 0 Query: 361 MDMSWYQRVLRKPTWTPKPIVFPLVWIPLKLLQTAALTVVWRLVER-NALAVPVLLFLLHLTLGDLWNVVFFGEKRIGYGLSVMYAFYASLAASCYSFYSVRPRAAYLLVPTAVWVFVATSLNYSIWLMN 490 MD +WY + L+KP+WTP VFPLVWIPLK +Q+ AL +V + ++LA+P+ F +H+ LG+ WNVVFFG +++ L MYAF+ S+AAS +FY + P AAYL++PT VWV +AT LN+ I +N Sbjct: 38 MDPTWY-KSLKKPSWTPPNYVFPLVWIPLKTMQSVALWLVCSKAKSVSSLALPLAAFGIHMFLGNWWNVVFFGRRQLEGSLPWMYAFWGSIAASAAAFYPISPVAAYLMLPTQVWVTIATKLNWDIVQIN 166
BLAST of NO03G02070 vs. NCBI_GenBank
Match: PNH09508.1 (Protein CrtK [Tetrabaena socialis]) HSP 1 Score: 122.1 bits (305), Expect = 4.900e-24 Identity = 71/158 (44.94%), Postives = 97/158 (61.39%), Query Frame = 0 Query: 333 PTLLLSLDIFTAFAAIFLSENVGFLRTKMDMSWYQRVLRKPTWTPKPIVFPLVWIPLKLLQTAAL-TVVWRLVERNALAVPVLLFLLHLTLGDLWNVVFFGEKRIGYGLSVMYAFYASLAASCYSFYSVRPRAAYLLVPTAVWVFVATSLNYSIWLMN 490 P + +L + + + +F V L D SWY + L+KP+WTP VFPLVWIPLKL+QT AL V + AL VP+ H+ LG+ WNVVFFG++++ L MY F+AS+AA+ +FY + P AAYLL+PT VWV +A LN I +N Sbjct: 13 PVAINALGLAASASVVF---GVQRLVPTFDPSWY-KSLKKPSWTPPNYVFPLVWIPLKLMQTVALWLVATKAPSAAALGVPLFAMGAHMALGNWWNVVFFGQRKLNESLPWMYTFWASVAATAAAFYPISPLAAYLLLPTQVWVTIAAKLNVDIVALN 166
BLAST of NO03G02070 vs. NCBI_GenBank
Match: PSC75646.1 (vacuolar sorting-associated 52 A [Micractinium conductrix]) HSP 1 Score: 121.7 bits (304), Expect = 6.500e-24 Identity = 81/172 (47.09%), Postives = 100/172 (58.14%), Query Frame = 0 Query: 325 AAASTKFDPTLLLSLD-----IFTAFAAIFLSENVGFLRTKMDMSWYQRVLRKPTWTPKPIVFPLVWIPLKLLQTAALTVVWRLVERNA--LAVPVLLFLLHLTLGDLWNVVFFGEKRIGYGLSVMYAFYASLAASCYSFYSVRPRAAYLLVPTAVWVFVATSLNYSIWLMN 490 A+A P LL +L + AFA +F V L WY + LRKP+WTP FPLVWIPLK+LQ+ AL +VWR E +A LA P+ LF HL LG+ WNVVFFG R+ L M AF+AS+AAS +F V P AA L PT VWV +A LN+ I +N Sbjct: 467 ASALDAASPGLLAALTPPDWALAGAFATVF---GVQRLVPTFKADWY-KALRKPSWTPPNYAFPLVWIPLKVLQSVALWLVWRAGEGDARRLAAPLTLFGAHLFLGNAWNVVFFGRHRLQDSLGWMGAFWASIAASIAAFSQVSPLAALLFAPTQVWVTIAAKLNWDIVQLN 634
BLAST of NO03G02070 vs. NCBI_GenBank
Match: PRW59611.1 (tryptophan-rich sensory [Chlorella sorokiniana]) HSP 1 Score: 120.6 bits (301), Expect = 1.400e-23 Identity = 71/147 (48.30%), Postives = 94/147 (63.95%), Query Frame = 0 Query: 344 AFAAIFLSENVGFLRTKMDMSWYQRVLRKPTWTPKPIVFPLVWIPLKLLQTAALTVVWRL-VERNALAVPVLLFLLHLTLGDLWNVVFFGEKRIGYGLSVMYAFYASLAASCYSFYSVRPRAAYLLVPTAVWVFVATSLNYSIWLMN 490 AFA +F V L + WYQ+++ KP+WTP VFPLVWIPLK+LQ+ +L +VWR + LA+P+ LF LHL LG+ WNVVFFG+ ++ M AF+AS+AAS +F V P AA L PT VWV +A LN+ I +N Sbjct: 36 AFAVVF---GVQRLVPTFEKGWYQKLV-KPSWTPPNYVFPLVWIPLKILQSVSLWLVWRSGKDAGELALPLSLFGLHLFLGNWWNVVFFGQHKLEESTKWMGAFWASIAASIAAFAQVTPLAALLFAPTQVWVTIAAKLNWDIVQLN 178
BLAST of NO03G02070 vs. NCBI_GenBank
Match: XP_005648605.1 (TspO/MBR-related protein [Coccomyxa subellipsoidea C-169] >EIE24061.1 TspO/MBR-related protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 116.3 bits (290), Expect = 2.700e-22 Identity = 60/127 (47.24%), Postives = 87/127 (68.50%), Query Frame = 0 Query: 365 WYQRVLRKPTWTPKPIVFPLVWIPLKLLQTAALTVVWRL--VERNALAVPVLLFLLHLTLGDLWNVVFFGEKRIGYGLSVMYAFYASLAASCYSFYSVRPRAAYLLVPTAVWVFVATSLNYSIWLMN 490 WY + L+KP+W P VFP VWIPLK+LQ+AAL +VW+ ++ ++++P+ +F +H LG+ WNVVFFG + + L M AF+ S+AA+ +SFYSV P A L+ PT +WV +A LNY I +N Sbjct: 51 WYPK-LKKPSWNPPSWVFPAVWIPLKILQSAALWLVWKSAGADKASISIPLAIFGVHALLGNQWNVVFFGRRDMPGSLKWMGAFWLSVAATAFSFYSVNPLAGLLVSPTQIWVTIAAKLNYDIVKLN 176
BLAST of NO03G02070 vs. NCBI_GenBank
Match: XP_013905960.1 (tryptophan-rich sensory protein [Monoraphidium neglectum] >KIZ06941.1 tryptophan-rich sensory protein [Monoraphidium neglectum]) HSP 1 Score: 115.5 bits (288), Expect = 4.600e-22 Identity = 63/129 (48.84%), Postives = 85/129 (65.89%), Query Frame = 0 Query: 362 DMSWYQRVLRKPTWTPKPIVFPLVWIPLKLLQTAALTVVWRLVERN-ALAVPVLLFLLHLTLGDLWNVVFFGEKRIGYGLSVMYAFYASLAASCYSFYSVRPRAAYLLVPTAVWVFVATSLNYSIWLMN 490 D ++Y+ VL+KP WTP VFP VWIPLKLLQ+ +L +V + N AL +P+LLF HL LG+ WN VFFG++++ L VM AF+ S+A S +F + P A+ L PT VWV +A LNY I +N Sbjct: 44 DNTYYKEVLKKPNWTPPNWVFPAVWIPLKLLQSVSLWLVIKKAPSNQALTLPLLLFGTHLALGNYWNWVFFGQRQLKPSLKVMGAFWLSIAGSIAAFNPISPLASLLFAPTQVWVTIAAKLNYDIVKLN 172
BLAST of NO03G02070 vs. NCBI_GenBank
Match: XP_005791025.1 (hypothetical protein EMIHUDRAFT_109281 [Emiliania huxleyi CCMP1516] >EOD38596.1 hypothetical protein EMIHUDRAFT_109281 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 107.1 bits (266), Expect = 1.600e-19 Identity = 59/126 (46.83%), Postives = 79/126 (62.70%), Query Frame = 0 Query: 365 WYQRVLRKPTWTPKPIVFPLVWIPLKLLQTAALTVVWR-LVERNALAVPVLLFLLHLTLGDLWNVVFFGEKRIGYGLSVMYAFYASLAASCYSFYSVRPRAAYLLVPTAVWVFVATSLNYSIWLMN 490 WY +++ KP W P +FP++WIP+KL QTAA + WR L R A PV++FLLHL+LGD+WNV FF ++R GL V+Y F+A+L AS A L+ P WV VA +LN IW +N Sbjct: 114 WYDKLV-KPNWNPPAWLFPVMWIPIKLAQTAAAGITWRALGHRTFSAAPVVMFLLHLSLGDIWNVQFFLKQRKLTGLLVIYTFWAALIASAVLIGRTSLLAGALVAPGVAWVAVAAALNLDIWYLN 238
BLAST of NO03G02070 vs. NCBI_GenBank
Match: XP_005702996.1 (putative carotenoid biosynthesis protein, crtK-like protein [Galdieria sulphuraria] >EME26476.1 putative carotenoid biosynthesis protein, crtK-like protein [Galdieria sulphuraria]) HSP 1 Score: 105.5 bits (262), Expect = 4.800e-19 Identity = 54/129 (41.86%), Postives = 83/129 (64.34%), Query Frame = 0 Query: 364 SWYQRVLRKPTWTPKPIVFPLVWIPLKLLQTAALTVVWRLVERNALAVPVLLFLLHLTLGDLWNVVFFGEKRIGYGLSVMYAFYASLAASCYSFYSVRPRAAYLLVPTAVWVFVATSLNYSIWLMNGQP 493 SWYQ + +KP W P +FP VWIPLK+LQ+A+L ++WR E + VP F++HL+ G+LWN +FF + + L M F+ SLA++ ++F+ V AA LL PT +W +A +LN+ + +N +P Sbjct: 74 SWYQSI-KKPVWQPPNWLFPAVWIPLKVLQSASLFLLWR-KEGDFPIVPSAAFVVHLSFGNLWNYLFFARRNMFASLFAMGGFWVSLASTIFAFHKVDSYAALLLAPTQIWATIAAALNFHTYWLNRRP 200 The following BLAST results are available for this feature:
BLAST of NO03G02070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G02070 ID=NO03G02070|Name=NO03G02070|organism=Nannochloropsis oceanica|type=gene|length=2615bpback to top protein sequence of NO03G02070.1 >NO03G02070.1-protein ID=NO03G02070.1-protein|Name=NO03G02070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=502bpback to top Synonyms
Publications
|