NO03G02060, NO03G02060 (gene) Nannochloropsis oceanica

Overview
NameNO03G02060
Unique NameNO03G02060
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1555
Alignment locationchr3:617755..619309 -

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Properties
Property NameValue
Description3-dehydroquinate synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:617755..619309 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009073aromatic amino acid family biosynthetic process
GO:0055114oxidation-reduction process
GO:0055114oxidation-reduction process
GO:0009073aromatic amino acid family biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:00038563-dehydroquinate synthase activity
GO:0016491oxidoreductase activity
GO:00038563-dehydroquinate synthase activity
Vocabulary: INTERPRO
TermDefinition
IPR002812DHQ_synth
Homology
BLAST of NO03G02060 vs. NCBI_GenBank
Match: EWM29638.1 (3-dehydroquinate synthase [Nannochloropsis gaditana])

HSP 1 Score: 393.7 bits (1010), Expect = 7.900e-106
Identity = 220/403 (54.59%), Postives = 272/403 (67.49%), Query Frame = 0
Query:   54 MTSLELWANCLKRDSKGNHPIPTGATRCFDIKDGLLKASSTPQIRVDEHQGHLYDEQERLIGAAISVKNPEDINNAIKLVGSVDWLVLEFFIDWIQIPCENVIAAAQGSPTRICVKPNKIDDVPGVAFALQTGVDALLLELQDESMWVAAREAQARKDTNRQTAAAGGTAAVAV--ALGEHHEETAGHISLVPARVINIVSGGLGDRVCLDLVQLLKEGEGCLVGSSAKALALVQAEVLPTGYINPRPFRVNAGPVHSYVLMADGSARYLSEVQAGDQVKVVNWRGQARGVTVGRCKVESRPLVKVAFEW---GEEGREGWGEEKKTAQVFLQQAETVRFVGNPGXXXXXXXDEFRLSGTEEEKRQGAGISVTEVIIGKKVLVRAQSKGTHLGRTIEARVEER 452
            MTSLELW +   R++K    IP GA+RC        +    P +  +E  G L D+ ERL+GA +++  PED+  AI L+GSVDW+VL+ FIDWIQIPCENVIAAAQG PTR+CV     + + GVAFAL+TGVDA+LL+   + +W  AR  QA K+     A+ G  A      A+G+  E    H+ LVPA+V  +V GG+GDRVCLDLVQLLK GEGCLVGSSAK L LVQAEVL T YINPRPFR+NAGPVHSYVLM DGSA+YLSE++AGD+V+VV+  G +RGVTVGRCK+ESRPL+KV+F+W   GE G EG     +TAQ+FLQQAETV  V                 GT E    G   SVT +  G  V+VRA+S+GTHLG  I+A VEE+
Sbjct:   51 MTSLELWVDV--RNTKAF--IPLGASRCL-THHAPTEPLDVPFLVEEEATGRLQDDHERLVGAVLAITKPEDVTKAINLIGSVDWVVLDAFIDWIQIPCENVIAAAQGGPTRVCVAVEDAEQLSGVAFALETGVDAVLLKPGRDQLWSHARRVQAEKNEKILPASEGSGAQTVFPSAVGKEQE----HVQLVPAKVAEVVPGGVGDRVCLDLVQLLKVGEGCLVGSSAKGLILVQAEVLATTYINPRPFRINAGPVHSYVLMEDGSAKYLSEIEAGDRVRVVSADGHSRGVTVGRCKIESRPLLKVSFQWPAGGEGGNEG---GTRTAQIFLQQAETVCLV----------------RGTAE---GGGCTSVTRLRAGDMVVVRARSQGTHLGNAIKAHVEEK 422          
BLAST of NO03G02060 vs. NCBI_GenBank
Match: CBJ32971.1 (Similar to 3-Dehydroquinate Synthase [Ectocarpus siliculosus])

HSP 1 Score: 275.0 bits (702), Expect = 4.100e-70
Identity = 163/375 (43.47%), Postives = 222/375 (59.20%), Query Frame = 0
Query:   83 DIKDGLLKASSTPQIRVDEHQGHLYDEQERLIGAAISVKNPEDINNAIKLVGSVDWLVLEFFIDWIQIPCENVIAAAQGSPTRICVKPNKIDDVPGVAFALQTGVDALLLELQDESMWVAAREAQARKDTNRQTAAAGGTAAVAVALGEHHEETAGH----ISLVPARVINIVSGGLGDRVCLDLVQLLKEGEGCLVGSSAKALALVQAEVLPTGYINPRPFRVNAGPVHSYVLMADGSARYLSEVQAGDQVKVVNWRGQARGVTVGRCKVESRPLVKVAFEWGEEGREGWGEEKKTAQVFLQQAETVRFVGNPGXXXXXXXDEFRLSGTEEEKRQG---AGISVTEVIIGKKVLVRAQSKGTHLGRTIEARVEE 451
            D   G L+++S   + V +  G L DE+  ++GA++ V +P+  + A+ LVGSVDW+ +    DW  IP EN+++AA G+PTRI V+ ++   V G AFALQ GVDALLL   D  +W AA  A+ ++ T+      G    V  A  +H E  AG     ++L   RV     GG+GDRVC+DL+Q L  GEG LVGSSAK LALV AE   TG++  RPFR+NAGPVHSY L+ DGS +YLSE+ AGDQV V NW+G++R V +GR KVE+RP++ V F+         GE   T Q+FLQQAETVR +                               +SVT++  G+ +L+R  S+GTH+GR I+A V E
Sbjct:  126 DNTTGKLRSTSKRSLVVKD-DGKLMDEKGTVVGASLEVTDPKSQSRALSLVGSVDWIQVT-CSDWTMIPAENLVSAAGGTPTRIAVELSEPSQVQGAAFALQIGVDALLLG-PDPDLWEAAVSAREQRGTD------GPATGVLPAPADHGEGGAGGGLDVVALSTGRVTRTREGGVGDRVCVDLIQSLNAGEGMLVGSSAKMLALVHAETFETGFVPARPFRINAGPVHSYALLGDGSTKYLSELCAGDQVLVTNWKGESRKVAIGRLKVETRPMIMVEFQ---------GEGGSTGQLFLQQAETVRLISPTQPETTAEKXXXXXXXXXXXXXXXXXWVPLSVTDIEGGEDLLLREISRGTHVGRAIDAVVTE 482          
BLAST of NO03G02060 vs. NCBI_GenBank
Match: CEM03426.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 262.3 bits (669), Expect = 2.800e-66
Identity = 158/349 (45.27%), Postives = 212/349 (60.74%), Query Frame = 0
Query:  114 IGAAISVKNPEDINNAIKLVGSVDWLVLEFFIDWIQIPCENVIAAAQGSPTRICVKPNKIDDVPGVAFALQTGVDALLLELQDESMWVAAREAQARKDTNRQ--TAAAGGTAAVAVALGEHHEETAGHISLVPARVINIVSGGLGDRVCLDLVQLLKEGEGCLVGSSAKALALVQAEVLPTGYINPRPFRVNAGPVHSYVLMADG-SARYLSEVQAGDQVKVVNWRGQA------RGVTVGRCKVESRPLVKVAFEWGEEGREGWGEEKKTAQVFLQQAETVRFV-GNPGXXXXXXXDEFRLSGTEEEKR--QGAGISVTEVIIGKKVLVRAQSKGTHLGRTIEARVEE 451
            +G  + +  PED N   KL+GSV+W+V++   DW+QIP EN++AA+  +PTRIC        + G+AF+LQ GVDALLL   D++MW AA EA+  +    Q   A A   +A  VA        + H  L  ARV+++  GG+GDRVCLDL+Q ++ GEG LVGSSA  LA V AE +P G++  RPFR+NAGPVH+Y LM DG S +YLSE+QAGD++ VV+    A      R V+VGRCKVE RP++KV F+   E  +G         VFLQQAETVR +  + G         F L G  E +       +S+T +  G  +LVR QS GTHLG+ I+A+V E
Sbjct:   58 VGKVVKIIQPEDQNEGKKLIGSVEWIVID-CDDWVQIPGENMVAASHQTPTRICAVVTDASQIQGLAFSLQLGVDALLLP-PDQAMWKAALEARTTRGQGTQPTNAEASQPSAKGVA--------SAHSGLRFARVVSVSDGGVGDRVCLDLIQNMRHGEGALVGSSAMRLAFVHAETIPAGFVPARPFRINAGPVHAYCLMGDGKSTKYLSEIQAGDEIAVVSLPAGADGSVTSRAVSVGRCKVERRPVLKVIFQ--IESADGTA-APSAGNVFLQQAETVRLLKRDEGTERPSGEHAFLLPGGGEGESVCWVVPVSITSLKAGDSILVRGQSVGTHLGQPIDAKVVE 393          
BLAST of NO03G02060 vs. NCBI_GenBank
Match: AIF18504.1 (3-dehydroquinate synthase [uncultured marine group II/III euryarchaeote KM3_83_B05])

HSP 1 Score: 228.8 bits (582), Expect = 3.400e-56
Identity = 153/396 (38.64%), Postives = 218/396 (55.05%), Query Frame = 0
Query:   57 LELWANCLKRDSKGNHPIPT-GATRCFDIKDGLLKASSTPQIRVDEHQGHLYDEQERLIGAAISVKNPEDINNAIKLVGSVDWLVLEFFIDWIQIPCENVIAAAQGSPTRICVKPNKIDDVPGVAFALQTGVDALLLELQDESMWVAAREAQARKDTNRQTAAAGGTAAVAVALGEHHEETAGHISLVPARVINIVSGGLGDRVCLDLVQLLKEGEGCLVGSSAKALALVQAEVLPTGYINPRPFRVNAGPVHSYVLMADGSARYLSEVQAGDQVKVVNWRGQARGVTVGRCKVESRPLVKVAFEWGEEGREGWGEEKKTAQVFLQQAETVRFVGNPGXXXXXXXDEFRLSGTEEEKRQGAGISVTEVIIGKKVLVRAQSKGTHLGRTIEARVEER 452
            +ELW +   ++  G HP     +T+     +   + S   + +VD   G + D   R IGA I ++N E    A++ VG  DWL+++   DW  IP EN++AAA  + T++    +  D + G  FALQ GVDAL+L   DE +W  A++  A+    R + +     + ++ + E  E       LV  +V+++ +GG+GDRVC+DLVQ+L+ GEG LVGSSA  L LV  E L + ++ PRPFR+NAGPVHSY+LMADGS +YLSE+ AGD+V VV+  G +R V VGR K+E RPL+ V F   + G           Q+FLQQAETVR V N             L  T          SVT +  G  +L    + G H+G+ I   VEE+
Sbjct:    1 MELWLS--SKNGVGEHPADALVSTKEDSFPNWASEESEIRRYQVD--NGAVTDCDGRTIGAFIQIENDEGQAAALEFVGLADWLLID-CPDWKMIPLENLVAAADQTSTKLAATISNSDQLQGATFALQRGVDALILP-DDEGIWRVAQQLAAQ----RLSDSGEVKESSSIVMMESPE-------LVKLQVMSVETGGVGDRVCVDLVQMLEIGEGVLVGSSAALLVLVHGETLSSQFVPPRPFRINAGPVHSYILMADGSTKYLSELVAGDEVLVVSPSG-SRAVAVGRLKIEPRPLLLVRFNSTQYGE---------GQLFLQQAETVRLVLN-------------LEKT---------ASVTHLEAGMNILGATATAGRHIGQAISGDVEEK 347          
BLAST of NO03G02060 vs. NCBI_GenBank
Match: AIF01958.1 (3-dehydroquinate synthase [uncultured marine group II/III euryarchaeote KM3_151_F02])

HSP 1 Score: 228.0 bits (580), Expect = 5.800e-56
Identity = 155/396 (39.14%), Postives = 215/396 (54.29%), Query Frame = 0
Query:   57 LELWANCLKRDSKGNHPIPTGATRCFDIKDGLLKASSTPQI-RVDEHQGHLYDEQERLIGAAISVKNPEDINNAIKLVGSVDWLVLEFFIDWIQIPCENVIAAAQGSPTRICVKPNKIDDVPGVAFALQTGVDALLLELQDESMWVAAREAQARKDTNRQTAAAGGTAAVAVALGEHHEETAGHISLVPARVINIVSGGLGDRVCLDLVQLLKEGEGCLVGSSAKALALVQAEVLPTGYINPRPFRVNAGPVHSYVLMADGSARYLSEVQAGDQVKVVNWRGQARGVTVGRCKVESRPLVKVAFEWGEEGREGWGEEKKTAQVFLQQAETVRFVGNPGXXXXXXXDEFRLSGTEEEKRQGAGISVTEVIIGKKVLVRAQSKGTHLGRTIEARVEER 452
            +ELW +   ++  G H  P  A  C         AS   +I R     G + D   R IGA I ++N E    A++ VG  DWL+++   DW  IP EN++AAA  + T++    +  D + G  FALQ GVDAL+L   DE +W  A++  A+    R + +     + ++ + E  E       LV  +V+++ +GG+GDRVC+DLVQ+L+ GEG LVGSSA  L LV  E L + ++ PRPFR+NAGPVHSY+LMADGS +YLSE+ AGD+V VV+  G +R V VGR K+E RPL+ V F   + G           Q+FLQQAETVR V N             L  T          SVT +  G  +L    + G H+G+ I   VEE+
Sbjct:    1 MELWLS--SKNGVGEH--PADALVCTKEDSFPNWASEESEIRRYQVDNGAVTDCDGRTIGAFIQIENDEGQAAALEFVGLADWLLID-CPDWKMIPLENLVAAADQTSTKLAATISNSDQLQGATFALQRGVDALILP-DDEGIWRVAQQLAAQ----RLSDSGEVKESSSIVMMESPE-------LVKLQVMSVETGGVGDRVCVDLVQMLEIGEGVLVGSSAALLVLVHGETLSSQFVPPRPFRINAGPVHSYILMADGSTKYLSELVAGDEVLVVSPSG-SRAVAVGRLKIEPRPLLLVRFNSTQYGE---------GQLFLQQAETVRLVLN-------------LEKT---------ASVTHLEAGMNILGATATAGRHIGQAISGDVEEK 347          
BLAST of NO03G02060 vs. NCBI_GenBank
Match: XP_005782939.1 (hypothetical protein EMIHUDRAFT_232870 [Emiliania huxleyi CCMP1516] >EOD30510.1 hypothetical protein EMIHUDRAFT_232870 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 223.0 bits (567), Expect = 1.900e-54
Identity = 151/361 (41.83%), Postives = 195/361 (54.02%), Query Frame = 0
Query:  100 DEHQGHLYDEQERLIGAAISVKNPEDINNAIKLVGSVDWLVLEFFI--DWIQIPCENVIAAAQGSPTRICVKPNKIDDVPGVAFALQTGVDALLL----ELQDESMWVA---AREAQARKDTNRQTAAAGGTAAVAVALGEHHEETAGHISLVPARVINIVSGGLGDRVCLDLVQLLKEGEGCLVGSSAKALALVQAEVLPTGYINPRPFRVNAGPVHSYVLMADGSARYLSEVQAGDQVKVVNWRGQARGVTVGRCKVESRPLVKVAFEWGEEGREGWGEEKKTAQVFLQQAETVRFVGNPGXXXXXXXDEFRLSGTEEEKRQGAGISVTEVIIGKKVLVRAQSKGTHLGRTIEARVEER 452
            DE    L       +G  +   +P     A+  VGSV+W+ L+     +W  IP ENVI+A                 VPG+AFAL+ G DAL+L    + + E++W A   AR  +A ++  R   AA G+ A  +A+G                 +   +GG+GDRV LD   LL++GEG LVGSSAK LALV  E +    +  RPFRVNAGPVHSYVL+ADG  +YL EV AGD+V   + RG +R +TVGRCKVE RPL+ V+FE   EG +G        QVFLQQAETVR +   G             G E   R     SVTEV  G +++VR   +GTH+GR IEA VEER
Sbjct:   68 DEPSAALLTPSGERVGLRVQASDPAGQAAAMSAVGSVNWVHLDTTSEDEWTMIPAENVISALTAG------------HVPGLAFALELGADALVLSPPEDAEGEALWEAGAIARAQRAEREEPRAAGAAAGSEAEGLAVG-----------------VVTSAGGVGDRVALDFTSLLRQGEGALVGSSAKLLALVHGETIEGELVPARPFRVNAGPVHSYVLLADGRTKYLEEVVAGDRVLAADARGGSRPLTVGRCKVEPRPLLLVSFE--VEGAKG--------QVFLQQAETVRLLVEGG-------------GGEVSAR-----SVTEVRPGDRLVVRQSRRGTHVGRQIEASVEER 371          
BLAST of NO03G02060 vs. NCBI_GenBank
Match: KOO33781.1 (3-dehydroquinate synthase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 221.1 bits (562), Expect = 7.000e-54
Identity = 140/346 (40.46%), Postives = 193/346 (55.78%), Query Frame = 0
Query:  122 NPEDINNAIKLVGSVDWLVLEFF--IDWIQIPCENVIAAAQGSPTRICVKPNKIDDVPGVAFALQTGVDALLLELQDES-------MWVAAREAQARKDTNRQTAAAGGTAAVAVALGEHHEETAGHISLVPAR-----VINIVSGGLGDRVCLDLVQLLKEGEGCLVGSSAKALALVQAEVLPTGYINPRPFRVNAGPVHSYVLMADGSARYLSEVQAGDQVKVVNWRGQARGVTVGRCKVESRPLVKVAFEWGEEGREGWGEEKKTAQVFLQQAETVRFV--GNPGXXXXXXXDEFRLSGTEEEKRQGAGISVTEVIIGKKVLVRAQSKGTHLGRTIEARVEER 452
            +P   + A+  VGS  W+ L+     +W  IP EN+++   G+P+++ V       VPG+AFALQ GV AL+L   DE        +W A   A+A++    +T A   ++A+A  + +         +L         V  + SGG+GDRV LD   LL+ GEG LVGSSAK L+LV  E L    +  RPFRVNAGPVHSYVL+AD + +YL E++ GDQV + + +G  R +TVGRCKVE RPL+ ++FE   +G  G        QVFLQQAETVR +  G  G                 E R     SVT++ +G ++L+R  + GTH+GR I ARVEER
Sbjct:    4 DPAGQSAAMAAVGSASWIHLDATTEAEWTMIPAENLVSVCDGTPSQVAVTALSAQQVPGLAFALQLGVGALVLAPPDEEDDVRRVMLWQAGSIARAQRTEIDETRALARSSALADEIADELAVAEDAPALTTTALSVGVVTAVASGGVGDRVALDFTSLLRVGEGALVGSSAKLLSLVHGETLHGALVPARPFRVNAGPVHSYVLLADETTKYLDEIRPGDQVLITDAQGSQRSLTVGRCKVEPRPLLLISFE--SDGASG--------QVFLQQAETVRVMVEGEAGL----------------EPR-----SVTDLRVGDRLLLRRTAMGTHVGRAIRARVEER 318          
BLAST of NO03G02060 vs. NCBI_GenBank
Match: AIE99335.1 (3-dehydroquinate synthase [uncultured marine group II/III euryarchaeote KM3_109_A02])

HSP 1 Score: 217.2 bits (552), Expect = 1.000e-52
Identity = 136/399 (34.09%), Postives = 206/399 (51.63%), Query Frame = 0
Query:   57 LELWANCLKRDSKGNHPIPTGATRCFDIKDGLLKASSTPQIRVDEHQGHLYDEQERLIGAAISVKNPEDINNAIKLVGSVDWLVLEFFIDWIQIPCENVIAAAQGSPTRICVKPNKIDDVPGVAFALQTGVDALLLELQD--ESMWVAAREAQARKDTNRQTAAAGGTAAVAVALGEHHEETAGHISLVPARVINIVSGGLGDRVCLDLVQLLKEGEGCLVGSSAKALALVQAEVLPTGYINPRPFRVNAGPVHSYVLMADGSARYLSEVQAGDQVKVVNWRGQARGVTVGRCKVESRP--LVKVAFEWGEEGREGWGEEKKTAQVFLQQAETVRFVGNPGXXXXXXXDEFRLSGTEEEKRQGAGISVTEVIIGKKVLVRAQSKGTHLGRTIEARVEER 452
            +E+W +    DS     IP G +R +        ++   ++ +D+H+G                      + A+ L+G V W+++    DW  IP EN++AA  GS T++    ++  D+ G AF+LQ GVDA+LL  ++  ES+W AA E                   +A A  +   E+  + SLV A V++I SGG+G+RVC+DL++ L  GEG  +GSSA +L LV  E LP+ ++  RPFRVNAG +H+YVLMADGS RYLSE++AGD+V V++  G  RGV +GR KVE RP  +++++   GE             Q+ LQQAETVR V                         G  + VT +  G +++   ++   H+G+ +   V ER
Sbjct:    1 MEIWLDASGADSP---DIPEGVSRVWS-----GSSADVAEVALDDHRGQ---------------------DEALSLIGLVPWILVRCG-DWTMIPLENIVAATYGSGTKLASAISREVDLNGAAFSLQHGVDAVLLPPEEGFESLWAAANE-------------------LASATPDSISESVSNHSLVTASVVSIESGGVGERVCVDLIERLSLGEGLAIGSSASSLCLVHGETLPSEFVPSRPFRVNAGAIHAYVLMADGSTRYLSELEAGDKVAVLSLNGSQRGVVIGRLKVERRPFIILRLSTPLGE------------GQIMLQQAETVRLV----------------------MASGEALPVTHIEEGDQIMALNEASMRHIGKAVSGEVAER 316          
BLAST of NO03G02060 vs. NCBI_GenBank
Match: PDH26756.1 (3-dehydroquinate synthase II family protein [Marine Group II euryarchaeote MED-G34])

HSP 1 Score: 217.2 bits (552), Expect = 1.000e-52
Identity = 146/409 (35.70%), Postives = 205/409 (50.12%), Query Frame = 0
Query:   45 RRHRHYHPHMTSLELWANCLKRDSKGNHPIPTGATRCFDIKDGLLKASSTPQIRVDEHQGHLYDEQERLIGAAISVKNPEDINNAIKLVGSVDWLVLEFFIDWIQIPCENVIAAAQGSPTRICVKPNKIDDVPGVAFALQTGVDALLL--ELQDESMWVAAREAQARKDTNRQTAAAGGTAAVAVALGEHHEETAGHISLVPARVINIVSGGLGDRVCLDLVQLLKEGEGCLVGSSAKALALVQAEVLPTGYINPRPFRVNAGPVHSYVLMADGSARYLSEVQAGDQVKVVNWRGQARGVTVGRCKVESRPLVKVAFEWGEEGREGWGEEKKTAQVFLQQAETVRFVGNPGXXXXXXXDEFRLSGTEEEKRQGAGISVTEVIIGKKVLVRAQSKGTHLGRTIEARVEER 452
            R  +HY  + T +ELW +  +  S     +P GA+R +        A    +I +D+++G                      + A  LVG V W VL    DW  IP EN++AAA GS T++        D+PG AFALQ GVDA+LL  E   E++WVAAR                  A  +  +  H E+    IS   A VI + SGG+G+R+C+DL++ L  GEG  +GSS+ +L LV  E LP+ Y+  RPFRVNAG VH+Y LMA+GS +YLSE+ +GD+V VV+  G  R   +GR K+E RP + V FE      EG        Q+  QQAETVR +   G                        +SVT++ +G ++L+R  S   H+G+ +   V ER
Sbjct:    7 RMLQHYSENDT-MELWLDATESSSSS---LPEGASRVW-----RGNAPDVAEIALDDYRGQ---------------------DEARSLVGMVPW-VLVRCSDWTMIPLENIVAAASGSGTKVAAAIYNEVDLPGAAFALQHGVDAVLLPPESGSEALWVAAR------------------AFTSETVSGHTEQKPSEIS--TATVIAVESGGVGERLCVDLIERLSSGEGMAIGSSSGSLCLVHGETLPSEYVPSRPFRVNAGAVHAYALMANGSTKYLSELNSGDEVAVVSLDGNQRSAVIGRLKIERRPFLVVRFECNSV--EG--------QIMAQQAETVRLISPTGD----------------------ALSVTDLHVGDEILIRVDSSMRHIGQALRGEVIER 332          
BLAST of NO03G02060 vs. NCBI_GenBank
Match: AIF18280.1 (3-dehydroquinate synthase [uncultured marine group II/III euryarchaeote KM3_82_C12])

HSP 1 Score: 214.2 bits (544), Expect = 8.600e-52
Identity = 135/399 (33.83%), Postives = 203/399 (50.88%), Query Frame = 0
Query:   57 LELWANCLKRDSKGNHPIPTGATRCFDIKDGLLKASSTPQIRVDEHQGHLYDEQERLIGAAISVKNPEDINNAIKLVGSVDWLVLEFFIDWIQIPCENVIAAAQGSPTRICVKPNKIDDVPGVAFALQTGVDALLLELQD--ESMWVAAREAQARKDTNRQTAAAGGTAAVAVALGEHHEETAGHISLVPARVINIVSGGLGDRVCLDLVQLLKEGEGCLVGSSAKALALVQAEVLPTGYINPRPFRVNAGPVHSYVLMADGSARYLSEVQAGDQVKVVNWRGQARGVTVGRCKVESRP--LVKVAFEWGEEGREGWGEEKKTAQVFLQQAETVRFVGNPGXXXXXXXDEFRLSGTEEEKRQGAGISVTEVIIGKKVLVRAQSKGTHLGRTIEARVEER 452
            +E+W +    DS     IP G +R +        ++   ++ +D+H+G                      + A+ L+G V W+++    DW  IP EN++AA  GS T++    ++  D+ G  F+LQ GVDA+LL  ++  ES+W AA E                   +A A  +   E+  + SLV A V++I SGG+G+RVC+DL++ L  GEG  +GSSA +L LV  E LP+ ++  RPFRVNAG +H+YVLMADGS RYLSE++AGD+V V++  G  RG  +GR KVE RP  ++++A   GE             Q+ LQQAETVR V                         G    VT +  G +++   ++   H+G+ +   V ER
Sbjct:    1 MEIWLDASGADSP---DIPEGVSRVWS-----GSSADVAEVALDDHRGQ---------------------DEALSLIGLVPWILVRCG-DWTMIPLENIVAATYGSGTKLASAISREVDLNGAVFSLQHGVDAVLLPPEEGFESLWAAANE-------------------LASATPDSTSESVSNHSLVTASVVSIESGGVGERVCVDLIERLSLGEGLAIGSSASSLCLVHGETLPSEFVPSRPFRVNAGAIHAYVLMADGSTRYLSELEAGDKVAVLSHNGSQRGAVIGRLKVERRPFIILRLATPLGE------------GQIMLQQAETVRLV----------------------MASGEASPVTHIEEGDQIMALNEASMRHIGKAVSGEVAER 316          
The following BLAST results are available for this feature:
BLAST of NO03G02060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29638.17.900e-10654.593-dehydroquinate synthase [Nannochloropsis gaditan... [more]
CBJ32971.14.100e-7043.47Similar to 3-Dehydroquinate Synthase [Ectocarpus s... [more]
CEM03426.12.800e-6645.27unnamed protein product [Vitrella brassicaformis C... [more]
AIF18504.13.400e-5638.643-dehydroquinate synthase [uncultured marine group... [more]
AIF01958.15.800e-5639.143-dehydroquinate synthase [uncultured marine group... [more]
XP_005782939.11.900e-5441.83hypothetical protein EMIHUDRAFT_232870 [Emiliania ... [more]
KOO33781.17.000e-5440.463-dehydroquinate synthase [Chrysochromulina sp. CC... [more]
AIE99335.11.000e-5234.093-dehydroquinate synthase [uncultured marine group... [more]
PDH26756.11.000e-5235.703-dehydroquinate synthase II family protein [Marin... [more]
AIF18280.18.600e-5233.833-dehydroquinate synthase [uncultured marine group... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL070nonsL070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR001ncniR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR053ngnoR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005693NSK005693Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G02060.1NO03G02060.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|522346gene_1392Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100050g41gene983Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G02060.1NO03G02060.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G02060 ID=NO03G02060|Name=NO03G02060|organism=Nannochloropsis oceanica|type=gene|length=1555bp
AGGGCAGGAAGAATCTCTAGACGACAGTCATGGCCCAGACTTGGGTTTAA
GCCTTGGATTTGATTAGCCGAGGTGAAGGGACAAGACACAGCGAAGGTAG
GGCATGAAAACCCTCTCCACGTCCCCTCTTCTCGTGCTGCCCTTGTTGCG
GCTGCTCTCGCCGCTGCTATTTGTGGTGCCGTGTTGCCAGACCGCCTTTT
TAGGAAGCGAACTCCCCACTCTCGGGCAGGGTTACCGTCGGCACCGCCAT
TATCACCCTCATATGACGTCCTTAGAGCTATGGGCTAATTGTTTAAAACG
CGACTCAAAGGGAAATCATCCTATTCCAACGGGCGCCACACGGTGTTTTG
ACATCAAAGATGGCTTATTGAAAGCCTCGTCTACCCCGCAGATTCGTGTT
GACGAGCACCAAGGCCACCTGTATGATGAGCAGGAGCGGTTGATAGGGGC
CGCGATTTCTGTGAAGAATCCGGAGGATATTAACAATGCAATTAAACTAG
TGGGTAGTGTGGATTGGCTCGTGCTTGAATTCTTCATTGACTGGATTCAA
ATTCCCTGTGAAAACGTAATTGCCGCGGCGCAGGGCAGTCCCACAAGAAT
TTGTGTCAAACCGAACAAAATAGATGATGTCCCCGGGGTAGCATTTGCGT
TGCAAACGGGCGTGGACGCGTTGTTGCTTGAGTTGCAGGACGAGTCTATG
TGGGTGGCGGCGCGTGAAGCGCAAGCTCGTAAGGACACAAACCGACAGAC
GGCTGCCGCTGGTGGTACTGCTGCTGTTGCTGTTGCTCTTGGAGAACACC
ACGAAGAAACGGCAGGACACATATCCCTGGTTCCCGCTCGAGTCATAAAT
ATAGTGTCAGGAGGATTGGGTGATCGTGTGTGTCTGGATCTTGTGCAACT
TCTGAAGGAAGGGGAGGGCTGCTTGGTGGGTTCATCAGCCAAGGCATTAG
CGTTGGTGCAAGCTGAAGTGCTGCCCACTGGTTATATAAATCCACGCCCC
TTTCGCGTTAATGCTGGCCCTGTGCACTCCTACGTGTTGATGGCCGATGG
CAGTGCTAGGTATCTCTCGGAGGTCCAGGCGGGGGATCAAGTCAAGGTGG
TGAATTGGCGAGGACAAGCAAGGGGGGTCACCGTGGGGAGGTGTAAAGTC
GAGAGTCGGCCTCTGGTGAAGGTGGCGTTCGAATGGGGAGAGGAGGGGAG
GGAGGGATGGGGGGAGGAGAAGAAGACGGCGCAGGTGTTCTTGCAACAGG
CCGAGACGGTGCGATTTGTGGGGAATCCCGGCGGGGATGGAGGAGATGGG
GATGATGAATTCAGACTTTCCGGAACAGAGGAGGAAAAGCGGCAGGGGGC
GGGAATCAGTGTGACGGAAGTGATTATTGGGAAGAAGGTATTAGTACGAG
CGCAAAGCAAGGGAACGCATTTGGGGAGGACGATTGAGGCGAGGGTGGAG
GAGAGGTGAATAGTTAGGTTTCACGTTAAGAAGTGTAAATTGTGTGAACG
GAGCGTGGTGTGAAATGAATGACAGTAATGTAGAAAGTGGGAATAAATAG
TCGGC
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protein sequence of NO03G02060.1

>NO03G02060.1-protein ID=NO03G02060.1-protein|Name=NO03G02060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=452bp
MKTLSTSPLLVLPLLRLLSPLLFVVPCCQTAFLGSELPTLGQGYRRHRHY
HPHMTSLELWANCLKRDSKGNHPIPTGATRCFDIKDGLLKASSTPQIRVD
EHQGHLYDEQERLIGAAISVKNPEDINNAIKLVGSVDWLVLEFFIDWIQI
PCENVIAAAQGSPTRICVKPNKIDDVPGVAFALQTGVDALLLELQDESMW
VAAREAQARKDTNRQTAAAGGTAAVAVALGEHHEETAGHISLVPARVINI
VSGGLGDRVCLDLVQLLKEGEGCLVGSSAKALALVQAEVLPTGYINPRPF
RVNAGPVHSYVLMADGSARYLSEVQAGDQVKVVNWRGQARGVTVGRCKVE
SRPLVKVAFEWGEEGREGWGEEKKTAQVFLQQAETVRFVGNPGGDGGDGD
DEFRLSGTEEEKRQGAGISVTEVIIGKKVLVRAQSKGTHLGRTIEARVEE
R*
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Synonyms
Publications