NO03G02020, NO03G02020 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G02020 vs. NCBI_GenBank
Match: EWM29627.1 (HAD-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 337.0 bits (863), Expect = 4.400e-89 Identity = 154/222 (69.37%), Postives = 184/222 (82.88%), Query Frame = 0
Query: 10 AMVAKRGGAKARKVFLFDLDGTLYPNENGYRDHILNNLWEYMHEHLGIPRSTPAEDVWRPLFNKYHQSFRAFKAQGWIEDSQSIHYWRYIRKDVNRFLSPDAELDVFLSALPKECPKYIFTNAREEQAMEALVCLGVERHFDGVYGSDHMGDYCKPEKEAFEKVLAALPVSSLEG--------------EGEKGREVVLFEDSFKNLMAAKELGMKTILICK 218
A VA + G++ R ++LFDLDGTLY NENGYRD+IL NLWEYMHEH+GIPRSTPA+ +WRPLF+KYHQSFRAFKAQGWI+DS+S HYW YIRKDV++FL PD +LD FL +LPK CPKYIFTNAREEQA EAL CLGVERHF+G++GS+HMGD+CKPE EAFEKVL A+P++ +EG +G G +VLFEDSFKNLMAAK+LGMKT+LIC+
Sbjct: 2 ASVAAKQGSRPRWLYLFDLDGTLYSNENGYRDNILKNLWEYMHEHMGIPRSTPAKHIWRPLFDKYHQSFRAFKAQGWIDDSKSGHYWSYIRKDVDKFLVPDPDLDTFLESLPKHCPKYIFTNAREEQAREALACLGVERHFEGIFGSEHMGDHCKPEPEAFEKVLKAIPLTLVEGRDGREGNAAEETGQDGWAGESIVLFEDSFKNLMAAKQLGMKTVLICE 223
BLAST of NO03G02020 vs. NCBI_GenBank
Match: XP_002500742.1 (predicted protein [Micromonas commoda] >ACO62000.1 predicted protein [Micromonas commoda]) HSP 1 Score: 155.6 bits (392), Expect = 1.800e-34 Identity = 87/205 (42.44%), Postives = 121/205 (59.02%), Query Frame = 0
Query: 11 MVAKRGGAKARKVFLFDLDGTLYPNENGYRDHILNNLWEYMHEHLGIPRSTPAEDVWRPLFNKYHQSFRAFKAQGWIEDSQSIHYWRYIRKDVNRFLSPDAELDVFLSALPKECPKYIFTNAREEQAMEALVCLGVERHFDGVYGSDHMGDYCKPEKEAFEKVLAALPVSSLEGEGEKGREVVLFEDSFKNLMAAKELGMKTILI 216
M A++ GA LFDLDGTLYP ENGY + + ++E+M + L + A+++W F Y+Q+ R+ + QG + YW +IR D FL + + L + P C K++FTN E+QA+EAL LG+E FDGVYG+D MGD CKPE+ AFE V A + +E G V FEDS KNL+ AKE+G T+L+
Sbjct: 1 MSAQKLGAGVH-TLLFDLDGTLYPIENGYEEKVRERVFEFMVDELKVSSVEQAKEMWWEHFKVYNQTLRSLR-QGMGFEFDREKYWSHIRGDPADFLQANFDALEMLRSFP-GCKKFVFTNCAEKQAIEALQVLGLEGEFDGVYGADFMGDVCKPERAAFEAVCAR---AKIEPNG-----TVFFEDSVKNLVTAKEMGFTTVLV 194
BLAST of NO03G02020 vs. NCBI_GenBank
Match: CBJ33036.1 (HAD-superfamily hydrolase [Ectocarpus siliculosus]) HSP 1 Score: 152.9 bits (385), Expect = 1.200e-33 Identity = 82/195 (42.05%), Postives = 110/195 (56.41%), Query Frame = 0
Query: 22 KVFLFDLDGTLYPNENGYRDHILNNLWEYMHEHLGIPRSTPAEDVWRPLFNKYHQSFRAFKAQGWIEDSQSIHYWRYIRKDVNRFL-SPDAELDVFLSALPKECPKYIFTNAREEQAMEALVCLGVERHFDGVYGSDHMGDYCKPEKEAFEKVLAALPVSSLEGEGEKGREVVLFEDSFKNLMAAKELGMKTILI 216
+ LFDLDGTLYP +NGY H+ N+W +M + LGI E VWRPLF KY+QS + + G E +W +R F+ + L LP++ KY+FTN E +A EAL LG+ HF GV G+ MG+ CKP+K AFE VL ++ G + V+FEDSFKNL+ A LGM T+ +
Sbjct: 2 ETLLFDLDGTLYPLDNGYHIHVRQNMWRFMSDKLGIEE---PEKVWRPLFQKYNQSAKGLRVGGGYEFDLE-DFWTSVRAGAADFIKEAPPGVKSALEKLPQK-DKYVFTNCNEVEAEEALALLGIRHHFKGVIGAKAMGETCKPDKAAFEGVLQSV--------GADPAKTVMFEDSFKNLVTATSLGMATVFV 183
BLAST of NO03G02020 vs. NCBI_GenBank
Match: OEU15272.1 (HAD-like protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 143.3 bits (360), Expect = 9.300e-31 Identity = 81/198 (40.91%), Postives = 116/198 (58.59%), Query Frame = 0
Query: 25 LFDLDGTLYPNENGYRDHILNNLWEYMHEHLG-----IPRSTPAEDVWRPLFNKYHQSFRAFKAQGWIEDSQSIHYWRYIRKDVNRFLSPDAELDVFLSALPKECPKYIFTNAREEQAMEALVCLGVERHFDGVYGSDHM--GDYCKPEKEAFEKVLAALPVSSLEGEGEKGREVVLFEDSFKNLMAAKELGMKTILI 216
LFDLDGTLY + GY + I +N++++M E G I A+ VW+P+F+KY+ + RA +G++ DS+ +Y ++R+ +++ D +L FL + P E K +FTNA E A E L LGV+ FD V G+D + G CKP+ +AF KV+ L VS E V FEDSFKNL A K LG +T+ I
Sbjct: 1 LFDLDGTLYDHACGYEEEIHSNIFKFMVEMSGGKFNTITTVDEAQRVWQPMFDKYNLTKRALIGEGYVFDSK--YYDTFVRRGADKYFVKDDQLREFLESFPSEMKKVVFTNAPESSANEILNLLGVDDLFDHVLGTDFLDYGSICKPDPKAFTKVMNYLNVSPSE-----YHRVCYFEDSFKNLKAGKNLGFRTVFI 191
BLAST of NO03G02020 vs. NCBI_GenBank
Match: XP_001422140.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABP00457.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 141.0 bits (354), Expect = 4.600e-30 Identity = 86/212 (40.57%), Postives = 117/212 (55.19%), Query Frame = 0
Query: 13 AKRGGAKARKVFLFDLDGTLYPNENGYRDHILNNLWEYMHEH-LGIPRSTPAEDVWRPLFNKYHQSFRAFKAQGWIEDSQSIHYWRYIRKDVNRFLSPDAELDVFLSALP-KECPKYIFTNAREEQAMEALVCLGVERHF-DGVYGSDHMGDYCKPEKEAFEKVLAALPVSSLEGEGEKGREVVLFEDSFKNLMAAKEL-GMKTILICKCSF 221
A R A+A ++FDLDGTLY NGY ++E+M G+ A VW F +Y+Q+ RA + G + + YWR+ R D L+P A++ F+ +LP KY+FTN E QA+EAL LG+ F D V+G+ MG+ CKPE+EAFEK A V + E V FEDS KNL AAKE+ GM T+L+ +F
Sbjct: 10 ASRASARA---YVFDLDGTLYAIANGYEAACRRRVYEFMATRCAGVDDVAEARVVWEKWFKRYNQTLRALR-HGAGYEFDAAEYWRFTRGDAREHLAPSADVRAFVESLPGGRENKYVFTNCNETQALEALEALGLRDCFADRVFGAGGMGECCKPEREAFEKFFAFCGVDVADAS-----ECVFFEDSLKNLRAAKEIFGMTTVLVAGETF 212
BLAST of NO03G02020 vs. NCBI_GenBank
Match: OUS45120.1 (HAD-superfamily hydrolase, subfamily [Ostreococcus tauri]) HSP 1 Score: 140.6 bits (353), Expect = 6.000e-30 Identity = 82/194 (42.27%), Postives = 106/194 (54.64%), Query Frame = 0
Query: 24 FLFDLDGTLYPNENGYRDHILNNLWEYMHEHLGIPRSTPAEDVWRPLFNKYHQSFRAFKAQGWIEDSQSIHYWRYIRKDVNRFLSPDAELDVFLSALPKE-CPKYIFTNAREEQAMEALVCLGVERHFDGVYGSDHMGDYCKPEKEAFEKVLAALPVSSLEGEGEKGREVVLFEDSFKNLMAAKEL-GMKTILI 216
++FDLDGTLY ENGY ++EYM + LG AE++WR F K++Q+ RA + G+ D+ + YW R D + FL+P AE L A+ + +FTN E QA EAL LG+E FDGV+G+ MGD KP AFE+ A V V FEDS KNL AA L GM T+LI
Sbjct: 90 YVFDLDGTLYDIENGYERRCRARVYEYMRDALGCESVARAEEIWREHFPKHNQTLRALRRAGYDVDADA--YWARTRGDPSEFLTPRAETRAMLDAIAATGGRRLVFTNCHERQAREALRALGIEDCFDGVFGAGGMGDEAKPSAGAFERFFHAHDV-------RDPTRCVFFEDSLKNLRAASSLFGMVTVLI 274
BLAST of NO03G02020 vs. NCBI_GenBank
Match: XP_003084182.2 (HAD-superfamily hydrolase, subfamily IA, variant 3 [Ostreococcus tauri] >CEG00750.1 HAD-superfamily hydrolase, subfamily IA, variant 3 [Ostreococcus tauri]) HSP 1 Score: 137.9 bits (346), Expect = 3.900e-29 Identity = 81/194 (41.75%), Postives = 105/194 (54.12%), Query Frame = 0
Query: 24 FLFDLDGTLYPNENGYRDHILNNLWEYMHEHLGIPRSTPAEDVWRPLFNKYHQSFRAFKAQGWIEDSQSIHYWRYIRKDVNRFLSPDAELDVFLSALPKE-CPKYIFTNAREEQAMEALVCLGVERHFDGVYGSDHMGDYCKPEKEAFEKVLAALPVSSLEGEGEKGREVVLFEDSFKNLMAAKEL-GMKTILI 216
++FDLDGTLY NGY ++EYM + LG AE++WR F K++Q+ RA + G+ D+ + YW R D + FL+P AE L A+ + +FTN E QA EAL LG+E FDGV+G+ MGD KP AFE+ A V V FEDS KNL AA L GM T+LI
Sbjct: 5 YVFDLDGTLYDIGNGYERRCRARVYEYMRDALGCESVARAEEIWREHFPKHNQTLRALRRAGYDVDADA--YWARTRGDPSEFLTPRAETRAMLDAIAATGGRRLVFTNCHERQAREALRALGIEDCFDGVFGAGGMGDEAKPSAGAFERFFHAHDV-------RDPTRCVFFEDSLKNLRAASSLFGMVTVLI 189
BLAST of NO03G02020 vs. NCBI_GenBank
Match: XP_007511233.1 (unknown [Bathycoccus prasinos] >CCO66793.1 unknown [Bathycoccus prasinos]) HSP 1 Score: 132.1 bits (331), Expect = 2.200e-27 Identity = 75/220 (34.09%), Postives = 110/220 (50.00%), Query Frame = 0
Query: 19 KARKVFLFDLDGTLYPNENGYRDHILNNLWEYMHEHLGIPRSTPAEDVWRPLFNKYHQSFRAFKAQGWIEDSQSIHYWRYIRKDVNRFLSPDAELDVFLSALPKECPKYIFTNAREEQAMEALVCLGVERHFDGVYGSDHMGDYCKPEKEAFEKVLAALP--VSSLEGEGEKGR-----------------------------EVVLFEDSFKNLMAAKE 208
K K LFDLDG LYP ENGY ++E+M LG A+ +W+ F K++Q+ ++ + G + + YW + R D ++ L PD ++ L + K PK++ TN E +A +AL L + FD VYG+D MGD CKP KEAF KVL + + +++G G EV +FEDS KNL++AK+
Sbjct: 8 KKVKFALFDLDGCLYPIENGYEHACRARVFEFMVSQLGYETIDKAKTIWKREFTKHNQTLKSLRELGHVRFKKET-YWEFTRGDCSQHLEPDEQVRECLRKMSKSFPKFVLTNCAETEAKQALERLNILDQFDYVYGADFMGDTCKPSKEAFGKVLRDVKRRMKAMDGVRSDGTDDDVHSVDEDDITEEEEANEGIQEPFDDDEVFMFEDSLKNLVSAKD 226
BLAST of NO03G02020 vs. NCBI_GenBank
Match: XP_003064433.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH51338.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 123.6 bits (309), Expect = 7.600e-25 Identity = 77/224 (34.38%), Postives = 101/224 (45.09%), Query Frame = 0
Query: 27 DLDGTLYPNENGYRDHILNNLWEYMHEHLGIPRSTPAEDVWRPLFNKYHQSFRAFKAQGWIEDSQSIHYWRYIRKDVNRFLSPDAELDVFLSALPKEC----------------------------------PKYIFTNAREEQAMEALVCLGVERHFDGVYGSDHMG-DYCKPEKEAFEKVLAALPVSSLEGEGEKGREVVLFEDSFKNLMAAKELGMKTILI 216
DLDGTLY ENGY L+E+M E LG+P A ++WRP F ++QS +A +A G++ DS YW Y R D + L + + F ++ TN E+Q EAL L + +FD VYG+ HMG D KP+ EAFE V+ G FEDS KNL AAK LGM T+L+
Sbjct: 108 DLDGTLYAIENGYELACRERLFEFMVERLGLPSKDAARELWRPHFATHNQSLKALRAAGFVVDSD--EYWAYTRGDASTHLGANDDAIAFFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKSSHVLTNCHEKQGAEALAVLRLSGYFDRVYGAGHMGDDLAKPQIEAFELVIGM--------AGIDPARTAFFEDSVKNLAAAKTLGMTTVLV 321
BLAST of NO03G02020 vs. NCBI_GenBank
Match: XP_007509688.1 (unknown [Bathycoccus prasinos] >CCO18803.1 unknown [Bathycoccus prasinos]) HSP 1 Score: 114.4 bits (285), Expect = 4.600e-22 Identity = 68/214 (31.78%), Postives = 107/214 (50.00%), Query Frame = 0
Query: 19 KARKVFLFDLDGTLYPNENGYRDHILNNLWEYMHEHLGIPRSTPAEDVWRPLFNKYHQSFRAFKAQGWIEDSQSIHYWRYIRKDVNRFLSPDAELDVFLSALPKECPK-----YIFTNAREEQAMEALVCLGVERHF--DGVYGSDHMGDYCKPEKEAFEKVLAALPVSSLEGEGEKGREVVLFEDSFKNLMAAKELGMKTILICKCSFRLRMA 226
K + +FDLDG LYP NGY +++ +N +++ E + A V + F K++Q+ + ++ G+ + + Y+RK + +LS D ++ L L C K + TN E+QA + L L ++ DG+YGS MGD KP EAFE V + VS +E V+FEDSFKNL LGM + + + + +A
Sbjct: 78 KEKTTLVFDLDGVLYPASNGYLENVRDNQRKFLTEKFNLSLE-DARRVRKEAFEKHNQTLKGLRSLGYAVEHD--EFTEYVRKGYDEYLSCDLRVNKTLERLKLACSKRKGKMVLMTNTAEKQARKCLGALNIDEKLFEDGIYGSSFMGDNAKPMPEAFEMVCEDIGVSP--------KECVMFEDSFKNLKTCVALGMGGVFVAGETLEMELA 280 The following BLAST results are available for this feature:
BLAST of NO03G02020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G02020 ID=NO03G02020|Name=NO03G02020|organism=Nannochloropsis oceanica|type=gene|length=2911bpback to top protein sequence of NO03G02020.2 >NO03G02020.2-protein ID=NO03G02020.2-protein|Name=NO03G02020.2|organism=Nannochloropsis oceanica|type=polypeptide|length=226bpback to top protein sequence of NO03G02020.1 >NO03G02020.1-protein ID=NO03G02020.1-protein|Name=NO03G02020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=260bpback to top Synonyms
Publications
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