NO03G02010, NO03G02010 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G02010 vs. NCBI_GenBank
Match: WP_028875073.1 (RraA family protein [Tepidiphilus margaritifer]) HSP 1 Score: 194.1 bits (492), Expect = 4.500e-46 Identity = 94/157 (59.87%), Postives = 117/157 (74.52%), Query Frame = 0 Query: 65 FATADLCDSHEPQLQVAEGNAFRSYGQCASFSGKIVTIKCFENNPLVRTILSEPGNGKVLVVDGGGSLRRALFGDNIAALAVKNGWAGVIIYGAIRDSAVVDRLPLGVKALGTNPIKSSKQHPGDRDVVVAFAGVTFTPGHYVYADQDGIVVSATAL 222 F TADLCD+HE +++V RSYG + G + T+K FE+N LVR +L+EPG G +LV+DGGGSLRRAL GDN+A LAVKNGWAGVI+YG IRDSA + RLPLGV AL T+P K+ K+ G RDV V+F GVTF PG + YAD+DG++VS L Sbjct: 3 FHTADLCDAHEDRVRVL-APMLRSYGGARAAGGPVRTLKIFEDNALVREMLAEPGQGAMLVIDGGGSLRRALLGDNLAELAVKNGWAGVIVYGCIRDSAAIGRLPLGVWALATHPQKTVKRGEGQRDVPVSFGGVTFAPGMFAYADEDGVIVSDVPL 158
BLAST of NO03G02010 vs. NCBI_GenBank
Match: WP_077296774.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase [Aquaspirillum sp. LM1] >AQR64180.1 ribonuclease activity regulator protein RraA [Aquaspirillum sp. LM1]) HSP 1 Score: 193.7 bits (491), Expect = 5.900e-46 Identity = 91/157 (57.96%), Postives = 119/157 (75.80%), Query Frame = 0 Query: 65 FATADLCDSHEPQLQVAEGNAFRSYGQCASFSGKIVTIKCFENNPLVRTILSEPGNGKVLVVDGGGSLRRALFGDNIAALAVKNGWAGVIIYGAIRDSAVVDRLPLGVKALGTNPIKSSKQHPGDRDVVVAFAGVTFTPGHYVYADQDGIVVSATAL 222 F T DLCD+H L+V F+ +G A FSG++VT+K FE+N LVR L++PG G+VLVVDGGGSLR AL GD IA LAVKN WAG+++YG IRDS ++ LP+GV+AL T+P+KS K+ GD ++ V F GVTFTPG ++YAD+DG++VSA AL Sbjct: 3 FQTTDLCDAHSDHLRVV-APMFKRFGGHAQFSGQVVTLKLFEDNSLVRDTLAQPGEGRVLVVDGGGSLRCALVGDQIAELAVKNQWAGIVVYGCIRDSVAINALPIGVRALDTHPLKSIKKGVGDVEIPVTFGGVTFTPGDWLYADEDGVIVSAQAL 158
BLAST of NO03G02010 vs. NCBI_GenBank
Match: WP_011238345.1 (RraA family protein [Aromatoleum aromaticum] >Q5P203.1 RecName: Full=Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase; Short=HMG aldolase; AltName: Full=Oxaloacetate decarboxylase; Short=OAA decarboxylase; AltName: Full=Regulator of ribonuclease activity homolog; AltName: Full=RraA-like protein >CAI08661.1 Demethylmenaquinone methyltransferase [Aromatoleum aromaticum EbN1]) HSP 1 Score: 193.7 bits (491), Expect = 5.900e-46 Identity = 92/157 (58.60%), Postives = 118/157 (75.16%), Query Frame = 0 Query: 65 FATADLCDSHEPQLQVAEGNAFRSYGQCASFSGKIVTIKCFENNPLVRTILSEPGNGKVLVVDGGGSLRRALFGDNIAALAVKNGWAGVIIYGAIRDSAVVDRLPLGVKALGTNPIKSSKQHPGDRDVVVAFAGVTFTPGHYVYADQDGIVVSATAL 222 F TADLCD++E ++++ FRSYG +F G+I T+K FE+N LVRT L PG GKVLVVDGGGS+R AL GD +A L VKN WAGVI+YG IRDS + + LGV ALG++P+KS K+ GD D+ V F GVTFTPGH++YAD+DG+VVS ++L Sbjct: 3 FQTADLCDANESRVKIV-SPMFRSYGGRGAFCGRITTLKVFEDNSLVRTALEGPGQGKVLVVDGGGSMRCALVGDQLALLGVKNQWAGVIVYGCIRDSKAIGTMELGVFALGSHPLKSIKKGAGDVDIAVTFGGVTFTPGHFIYADEDGVVVSESSL 158
BLAST of NO03G02010 vs. NCBI_GenBank
Match: WP_019918901.1 (RraA family protein [Methyloversatilis discipulorum]) HSP 1 Score: 193.4 bits (490), Expect = 7.800e-46 Identity = 89/155 (57.42%), Postives = 117/155 (75.48%), Query Frame = 0 Query: 67 TADLCDSHEPQLQVAEGNAFRSYGQCASFSGKIVTIKCFENNPLVRTILSEPGNGKVLVVDGGGSLRRALFGDNIAALAVKNGWAGVIIYGAIRDSAVVDRLPLGVKALGTNPIKSSKQHPGDRDVVVAFAGVTFTPGHYVYADQDGIVVSATAL 222 TADLCD E +L++ FRSYG A+F G+I T+K FE+N LVR L PG+G+VLVVDGGGS+RRAL GD IAALAVKNGWAG+++YG IRDSA + + +GV ALGT+P+K+ K++ G D+ V+F G+ F PGHY+YAD DG++V +L Sbjct: 5 TADLCDQFESELRIC-APMFRSYGGRAAFGGQITTLKLFEDNGLVRKALEAPGDGRVLVVDGGGSMRRALVGDQIAALAVKNGWAGIVVYGCIRDSAAIGEMDIGVCALGTHPLKTVKRNEGQADLTVSFGGIDFVPGHYLYADADGVIVCPRSL 158
BLAST of NO03G02010 vs. NCBI_GenBank
Match: OYW25685.1 (ribonuclease activity regulator protein RraA [Methyloversatilis sp. 12-65-5]) HSP 1 Score: 193.4 bits (490), Expect = 7.800e-46 Identity = 89/155 (57.42%), Postives = 117/155 (75.48%), Query Frame = 0 Query: 67 TADLCDSHEPQLQVAEGNAFRSYGQCASFSGKIVTIKCFENNPLVRTILSEPGNGKVLVVDGGGSLRRALFGDNIAALAVKNGWAGVIIYGAIRDSAVVDRLPLGVKALGTNPIKSSKQHPGDRDVVVAFAGVTFTPGHYVYADQDGIVVSATAL 222 TADLCD E L++ FRS+G ++F G I T+K +E+N LVR L PG+GKVLVVDGGGS+RRAL GD IA LAVKNGWAG+++YG IRDSA + ++ +GV ALGT+P+K+ K++ G D++V+F GV F PGHY+YAD DG++VS AL Sbjct: 5 TADLCDQFEADLRIC-APMFRSFGGRSAFGGPIATLKLYEDNGLVRKALENPGDGKVLVVDGGGSMRRALVGDQIAELAVKNGWAGIVVYGCIRDSAAISQMNIGVMALGTHPLKTVKRNEGQSDIMVSFGGVDFVPGHYLYADGDGVIVSTRAL 158
BLAST of NO03G02010 vs. NCBI_GenBank
Match: KDD75270.1 (demethylmenaquinone methyltransferase [Helicosporidium sp. ATCC 50920]) HSP 1 Score: 192.6 bits (488), Expect = 1.300e-45 Identity = 95/167 (56.89%), Postives = 118/167 (70.66%), Query Frame = 0 Query: 65 FATADLCD---------SHEPQLQVAEGNAFRSYGQCASFSGKIVTIKCFENNPLVRTILSEPGNGKVLVVDGGGSLRRALFGDNIAALAVKNGWAGVIIYGAIRDSAVVDRLPLGVKALGTNPIKSSKQHPGDRDVVVAFAGVTFTPGHYVYADQDGIVVSATALH 223 FATADLCD + +Q+ G FR YG SF G I TI+C+ENNPLVR LSEPG+G+VLVVDGG S R AL GD +AA V+NGWAGVI+ G +RD+A++ LPLGVKALG++P+KSSK+ PG RDV V+F G TF P +VYAD DG++V+ LH Sbjct: 9 FATADLCDEFVTVPVDVASVGDVQIVNGQ-FRDYGGNLSFCGPISTIRCYENNPLVREALSEPGHGRVLVVDGGASQRCALLGDQLAATGVRNGWAGVIVNGCVRDTAILQTLPLGVKALGSHPLKSSKRDPGRRDVAVSFGGATFAPSAWVYADGDGVLVAPAKLH 174
BLAST of NO03G02010 vs. NCBI_GenBank
Match: XP_003079279.2 (Regulator of ribonuclease activity A [Ostreococcus tauri] >CEF97936.1 Regulator of ribonuclease activity A [Ostreococcus tauri]) HSP 1 Score: 192.6 bits (488), Expect = 1.300e-45 Identity = 94/169 (55.62%), Postives = 116/169 (68.64%), Query Frame = 0 Query: 65 FATADLCDSHEP------------QLQVAEGNAFRSYGQCASFSGKIVTIKCFENNPLVRTILSEPGNGKVLVVDGGGSLRRALFGDNIAALAVKNGWAGVIIYGAIRDSAVVDRLPLGVKALGTNPIKSSKQHPGDRDVVVAFAGVTFTPGHYVYADQDGIVVSATAL 222 F T+D+CD H P +++VA NA + YG F G++ T+ CFENNPLVR L EPG G+VLVVDGGGS R AL GDN+A A +NGW+GVI+ G +RDS + + +GVKA+GT+P+KSSK+ PG RDV V FAGVTF PG YVYAD DGIVVS L Sbjct: 33 FGTSDICDVHHPGLVDDVIGTSASRVRVARANALKDYGGLRRFRGEVSTVLCFENNPLVRLALEEPGLGRVLVVDGGGSERCALLGDNLAETAARNGWSGVIVNGCVRDSEDIAKFNVGVKAIGTHPLKSSKRDPGLRDVPVTFAGVTFVPGSYVYADADGIVVSPEKL 201
BLAST of NO03G02010 vs. NCBI_GenBank
Match: OUS48029.1 (Demethylmenaquinone methyltransferase [Ostreococcus tauri]) HSP 1 Score: 192.6 bits (488), Expect = 1.300e-45 Identity = 94/169 (55.62%), Postives = 116/169 (68.64%), Query Frame = 0 Query: 65 FATADLCDSHEP------------QLQVAEGNAFRSYGQCASFSGKIVTIKCFENNPLVRTILSEPGNGKVLVVDGGGSLRRALFGDNIAALAVKNGWAGVIIYGAIRDSAVVDRLPLGVKALGTNPIKSSKQHPGDRDVVVAFAGVTFTPGHYVYADQDGIVVSATAL 222 F T+D+CD H P +++VA NA + YG F G++ T+ CFENNPLVR L EPG G+VLVVDGGGS R AL GDN+A A +NGW+GVI+ G +RDS + + +GVKA+GT+P+KSSK+ PG RDV V FAGVTF PG YVYAD DGIVVS L Sbjct: 49 FGTSDICDVHHPGVVDDVIGTSASRVRVARANALKDYGGLRRFRGEVSTVLCFENNPLVRLALEEPGLGRVLVVDGGGSERCALLGDNLAETAARNGWSGVIVNGCVRDSEDIAKFNVGVKAIGTHPLKSSKRDPGLRDVPVTFAGVTFVPGSYVYADADGIVVSPEKL 217
BLAST of NO03G02010 vs. NCBI_GenBank
Match: KPV50752.1 (hypothetical protein SE17_25095 [Kouleothrix aurantiaca]) HSP 1 Score: 191.4 bits (485), Expect = 2.900e-45 Identity = 90/155 (58.06%), Postives = 116/155 (74.84%), Query Frame = 0 Query: 67 TADLCDSHEPQLQVAEGNAFRSYGQCASFSGKIVTIKCFENNPLVRTILSEPGNGKVLVVDGGGSLRRALFGDNIAALAVKNGWAGVIIYGAIRDSAVVDRLPLGVKALGTNPIKSSKQHPGDRDVVVAFAGVTFTPGHYVYADQDGIVVSATAL 222 T DLCD+H +LQ+A FR +G A+F G I T+ +E+N LVR L E G G+VLVVDGGGSLR AL GD + + VKNGWAG++++G +RDSA + +LPLGV+AL TNP++S K+ G RDV VAFAGVTFTPGHY+YAD DGI+V+ +L Sbjct: 5 TTDLCDAHADELQIA-APLFRDFGGTAAFGGPISTVHVYEDNVLVRAALEEAGAGRVLVVDGGGSLRCALVGDMLGEIGVKNGWAGIVVHGCVRDSAELAQLPLGVRALATNPLRSEKRGEGQRDVPVAFAGVTFTPGHYLYADADGIIVAPRSL 158
BLAST of NO03G02010 vs. NCBI_GenBank
Match: WP_067170157.1 (RraA family protein [Sterolibacterium denitrificans] >KYC29352.1 ribonuclease activity regulator protein RraA [Sterolibacterium denitrificans] >SMB31011.1 putative regulator of ribonuclease activity [Sterolibacterium denitrificans]) HSP 1 Score: 191.4 bits (485), Expect = 2.900e-45 Identity = 93/161 (57.76%), Postives = 117/161 (72.67%), Query Frame = 0 Query: 65 FATADLCDSHEPQLQVAE----GNAFRSYGQCASFSGKIVTIKCFENNPLVRTILSEPGNGKVLVVDGGGSLRRALFGDNIAALAVKNGWAGVIIYGAIRDSAVVDRLPLGVKALGTNPIKSSKQHPGDRDVVVAFAGVTFTPGHYVYADQDGIVVSATAL 222 FATADL D++E L FRSYG A F G I T+K FE+N LVRT LS+PGNG+VLV+DGGGSLR AL GD +A LAVKNGWAG+++YG IRDS + + LGV AL T+P+KS K++ G+ D+ V F GV+F PGH++YAD DG++VS TAL Sbjct: 7 FATADLLDANEAGLNAGTLHVVAPMFRSYGGRAVFGGPISTLKVFEDNSLVRTALSQPGNGRVLVIDGGGSLRCALVGDQLAELAVKNGWAGIVVYGCIRDSRAIGSMALGVFALATHPLKSIKRNVGEADLAVTFGGVSFVPGHFLYADADGVIVSQTAL 167 The following BLAST results are available for this feature:
BLAST of NO03G02010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G02010 ID=NO03G02010|Name=NO03G02010|organism=Nannochloropsis oceanica|type=gene|length=669bpback to top protein sequence of NO03G02010.1 >NO03G02010.1-protein ID=NO03G02010.1-protein|Name=NO03G02010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=223bpback to top Synonyms
Publications
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