NO03G02010, NO03G02010 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G02010 vs. NCBI_GenBank
Match: EWM29634.1 (regulator of ribonuclease activity a [Nannochloropsis gaditana]) HSP 1 Score: 287.0 bits (733), Expect = 5.200e-74 Identity = 147/204 (72.06%), Postives = 169/204 (82.84%), Query Frame = 0 Query: 20 TSSPRVVISSRTTTLALLLAASTANPLCHSTA-AHMMSSVQAVPKMFATADLCDSHEPQLQVAEGNAFRSYGQCASFSGKIVTIKCFENNPLVRTILSEPGNGKVLVVDGGGSLRRALFGDNIAALAVKNGWAGVIIYGAIRDSAVVDRLPLGVKALGTNPIKSSKQHPGDRDVVVAFAGVTFTPGHYVYADQDGIVVSATALH 223 TSS + +SR + AL +AA+T LC A AHMMS+ + P ATADLCD HE +LQVA+GNAF S+GQ +SF G+IVTIKCFENNPLVR LSEPG G+VLVVDGGGSLRRALFGDNIAALAVKNGWAGV+IYGAIRDSAV++ +PLGVKALGTNP+KS+KQHPGDR+VVV FAGVTF PGHYVY+D DGI+VS T LH Sbjct: 22 TSSSHALSASRNSNAALFMAATTFT-LCQPIAIAHMMSTCASRPP--ATADLCDDHEHRLQVADGNAFHSFGQHSSFCGEIVTIKCFENNPLVRATLSEPGEGRVLVVDGGGSLRRALFGDNIAALAVKNGWAGVVIYGAIRDSAVINTMPLGVKALGTNPVKSAKQHPGDRNVVVTFAGVTFKPGHYVYSDSDGIIVSETPLH 222
BLAST of NO03G02010 vs. NCBI_GenBank
Match: XP_005855741.1 (regulator of ribonuclease activity a, partial [Nannochloropsis gaditana CCMP526] >EKU20623.1 regulator of ribonuclease activity a, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 278.5 bits (711), Expect = 1.800e-71 Identity = 137/178 (76.97%), Postives = 154/178 (86.52%), Query Frame = 0 Query: 46 LCHSTA-AHMMSSVQAVPKMFATADLCDSHEPQLQVAEGNAFRSYGQCASFSGKIVTIKCFENNPLVRTILSEPGNGKVLVVDGGGSLRRALFGDNIAALAVKNGWAGVIIYGAIRDSAVVDRLPLGVKALGTNPIKSSKQHPGDRDVVVAFAGVTFTPGHYVYADQDGIVVSATALH 223 LC A AHMMS+ + P ATADLCD HE +LQVA+GNAF S+GQ +SF G+IVTIKCFENNPLVR LSEPG G+VLVVDGGGSLRRALFGDNIAALAVKNGWAGV+IYGAIRDSAV++ +PLGVKALGTNP+KS+KQHPGDR+VVV FAGVTF PGHYVY+D DGI+VS T LH Sbjct: 3 LCQPIAIAHMMSTCASRPP--ATADLCDDHEHRLQVADGNAFHSFGQHSSFCGEIVTIKCFENNPLVRATLSEPGEGRVLVVDGGGSLRRALFGDNIAALAVKNGWAGVVIYGAIRDSAVINTMPLGVKALGTNPVKSAKQHPGDRNVVVTFAGVTFKPGHYVYSDSDGIIVSETPLH 178
BLAST of NO03G02010 vs. NCBI_GenBank
Match: WP_053422471.1 (RraA family protein [Azoarcus sp. PA01] >KON80291.1 ribonuclease activity regulator protein RraA [Azoarcus sp. PA01]) HSP 1 Score: 202.6 bits (514), Expect = 1.300e-48 Identity = 98/157 (62.42%), Postives = 119/157 (75.80%), Query Frame = 0 Query: 65 FATADLCDSHEPQLQVAEGNAFRSYGQCASFSGKIVTIKCFENNPLVRTILSEPGNGKVLVVDGGGSLRRALFGDNIAALAVKNGWAGVIIYGAIRDSAVVDRLPLGVKALGTNPIKSSKQHPGDRDVVVAFAGVTFTPGHYVYADQDGIVVSATAL 222 F TADLCD+HE +++V FRSYG +F G I T+K FE+N LVR L EPG GKVLVVDGGGSLR AL GD +A L VKNGWAGVI+YG IRDS + + LGV ALGT+P+KS K+ G+RD+ V F GVTFTPGH++YAD+DGIVVS ++L Sbjct: 3 FQTADLCDAHETRVKVV-SPMFRSYGARTAFCGPITTLKVFEDNSLVRAALEEPGEGKVLVVDGGGSLRCALVGDQLALLGVKNGWAGVIVYGCIRDSKPIGTMELGVFALGTHPLKSIKKGAGERDIAVTFGGVTFTPGHFLYADEDGIVVSESSL 158
BLAST of NO03G02010 vs. NCBI_GenBank
Match: OHC71448.1 (ribonuclease activity regulator protein RraA [Rhodocyclales bacterium RIFCSPLOWO2_02_FULL_63_24]) HSP 1 Score: 200.3 bits (508), Expect = 6.300e-48 Identity = 91/156 (58.33%), Postives = 122/156 (78.21%), Query Frame = 0 Query: 67 TADLCDSHEPQLQVAEGNAFRSYGQCASFSGKIVTIKCFENNPLVRTILSEPGNGKVLVVDGGGSLRRALFGDNIAALAVKNGWAGVIIYGAIRDSAVVDRLPLGVKALGTNPIKSSKQHPGDRDVVVAFAGVTFTPGHYVYADQDGIVVSATALH 223 T DLCD+HE +++V E F S+G A+F G+I T+K FE+N LVR L PGN +VLV+DGGGSLRRAL GD +AALAVKNGWAG+++YG IRDS +D + +GV A+ T+P+K+ K++ G+ D+ V F GVTFTPG ++YAD+DG++VSATALH Sbjct: 5 TTDLCDAHEDKVRVVE-PMFSSFGGRAAFFGRIATLKLFEDNSLVRKTLESPGNNRVLVIDGGGSLRRALVGDQLAALAVKNGWAGIVVYGCIRDSRAIDEMDIGVFAIDTHPMKTVKKNVGEADIPVTFGGVTFTPGEWLYADEDGVIVSATALH 159
BLAST of NO03G02010 vs. NCBI_GenBank
Match: WP_069037763.1 (RraA family protein [Methyloversatilis sp. RAC08] >AOF80617.1 RraA family protein [Methyloversatilis sp. RAC08]) HSP 1 Score: 198.7 bits (504), Expect = 1.800e-47 Identity = 93/155 (60.00%), Postives = 118/155 (76.13%), Query Frame = 0 Query: 67 TADLCDSHEPQLQVAEGNAFRSYGQCASFSGKIVTIKCFENNPLVRTILSEPGNGKVLVVDGGGSLRRALFGDNIAALAVKNGWAGVIIYGAIRDSAVVDRLPLGVKALGTNPIKSSKQHPGDRDVVVAFAGVTFTPGHYVYADQDGIVVSATAL 222 TADLCD E L++ FRS+G ++F G I T+K FE+N LVR L PGNGKVLVVDGGGS+RRAL GD IAALAVKNGWAG+++YG IRDSA + ++ +GV ALGT+P+K+ K++ G D+ V+F G+ F PGHY+YAD DGI+VSA AL Sbjct: 5 TADLCDQFEADLRIC-APMFRSFGGHSAFGGPISTLKLFEDNGLVRKALETPGNGKVLVVDGGGSMRRALVGDQIAALAVKNGWAGIVVYGCIRDSAAISQMTIGVMALGTHPLKTVKRNEGQSDITVSFGGIDFVPGHYLYADGDGIIVSARAL 158
BLAST of NO03G02010 vs. NCBI_GenBank
Match: WP_008061048.1 (RraA family protein [Methyloversatilis universalis] >EGK71848.1 Regulator of ribonuclease activity A [Methyloversatilis universalis FAM5]) HSP 1 Score: 197.6 bits (501), Expect = 4.100e-47 Identity = 93/156 (59.62%), Postives = 118/156 (75.64%), Query Frame = 0 Query: 66 ATADLCDSHEPQLQVAEGNAFRSYGQCASFSGKIVTIKCFENNPLVRTILSEPGNGKVLVVDGGGSLRRALFGDNIAALAVKNGWAGVIIYGAIRDSAVVDRLPLGVKALGTNPIKSSKQHPGDRDVVVAFAGVTFTPGHYVYADQDGIVVSATAL 222 +TADLCD E +L++ FRSYG SF G I T+K FE+N LVR L PGNG+VLVVDGGGS+RRAL GD IAALAVKNGWAG+++YG IRDSA + + LGV ALGT+P+K+ K++ G D+ V+F G+ F PGH++YAD DG++VSA AL Sbjct: 4 STADLCDQFESELRIC-APMFRSYGGRTSFGGPITTLKLFEDNGLVRKALEAPGNGRVLVVDGGGSMRRALVGDQIAALAVKNGWAGIVVYGCIRDSAAIGEMDLGVFALGTHPLKTVKRNEGQADLTVSFGGIDFVPGHHLYADGDGVIVSARAL 158
BLAST of NO03G02010 vs. NCBI_GenBank
Match: PKO82399.1 (ribonuclease activity regulator protein RraA [Betaproteobacteria bacterium HGW-Betaproteobacteria-13]) HSP 1 Score: 196.4 bits (498), Expect = 9.200e-47 Identity = 92/155 (59.35%), Postives = 117/155 (75.48%), Query Frame = 0 Query: 67 TADLCDSHEPQLQVAEGNAFRSYGQCASFSGKIVTIKCFENNPLVRTILSEPGNGKVLVVDGGGSLRRALFGDNIAALAVKNGWAGVIIYGAIRDSAVVDRLPLGVKALGTNPIKSSKQHPGDRDVVVAFAGVTFTPGHYVYADQDGIVVSATAL 222 TADLCD+HE ++ V FRS+G C++F G I T+K FE+N LVR L GNG+VLVVDGGGS+R AL GD +A L VKNGWAG+++YG IRDS + + LGV ALGT+P K+ K++ G+ D+ V F GVTFTPGHYVYAD+DG++VSAT L Sbjct: 5 TADLCDAHEDKVSVL-APMFRSFGGCSAFGGAISTLKLFEDNSLVRKTLESAGNGRVLVVDGGGSMRCALVGDQLAELGVKNGWAGILVYGCIRDSKAIGEMNLGVFALGTHPRKTVKRNTGELDLAVTFGGVTFTPGHYVYADEDGVIVSATPL 158
BLAST of NO03G02010 vs. NCBI_GenBank
Match: WP_055424153.1 (RraA family protein [Tepidiphilus thermophilus] >CUB07898.1 RraA famliy [Tepidiphilus thermophilus]) HSP 1 Score: 195.3 bits (495), Expect = 2.000e-46 Identity = 93/157 (59.24%), Postives = 118/157 (75.16%), Query Frame = 0 Query: 65 FATADLCDSHEPQLQVAEGNAFRSYGQCASFSGKIVTIKCFENNPLVRTILSEPGNGKVLVVDGGGSLRRALFGDNIAALAVKNGWAGVIIYGAIRDSAVVDRLPLGVKALGTNPIKSSKQHPGDRDVVVAFAGVTFTPGHYVYADQDGIVVSATAL 222 F TADLCD+HE +++V RSYG + G + T+K FE+N LVR +L+EPG G +LV+DGGGSLRRAL GDN+A LAVKNGWAGV++YG IRDSA + RLPLGV AL T+P+K+ K+ G RDV V+F GVTF PG + YAD+DG++VS L Sbjct: 3 FHTADLCDAHEDRVRVL-APMLRSYGGARAAGGPVRTLKIFEDNALVREMLAEPGQGAMLVIDGGGSLRRALLGDNLAELAVKNGWAGVVVYGCIRDSAAIGRLPLGVWALATHPMKTVKRGEGQRDVPVSFGGVTFAPGMFAYADEDGVIVSDAPL 158
BLAST of NO03G02010 vs. NCBI_GenBank
Match: XP_002949311.1 (hypothetical protein VOLCADRAFT_120739 [Volvox carteri f. nagariensis] >EFJ49804.1 hypothetical protein VOLCADRAFT_120739 [Volvox carteri f. nagariensis]) HSP 1 Score: 194.9 bits (494), Expect = 2.700e-46 Identity = 104/189 (55.03%), Postives = 126/189 (66.67%), Query Frame = 0 Query: 45 PLCHSTAAHMMSSVQAVP---KMFATADLCDSHEP---------QLQVAEGNAFRSYGQCASFSGKIVTIKCFENNPLVRTILSEPGNGKVLVVDGGGSLRRALFGDNIAALAVKNGWAGVIIYGAIRDSAVVDRLPLGVKALGTNPIKSSKQHPGDRDVVVAFAGVTFTPGHYVYADQDGIVVSATAL 222 P STAA MSS P TADL D + P +QV N FR +G FSG+ T+KC+ENNPLVR L EPGNG+VLVVDGGGSLR AL GD +A VKNGW+G+++ G IRDSA + ++PLGVKALGT+P+KSSK+ PG RDV V+F GVT +PG +VYAD DGI+VS L Sbjct: 21 PGLSSTAARAMSSGATPPPDVDRKGTADLTDKYMPDPVDTVCTRSVQVVTPNLFRDFGGKLRFSGQASTVKCYENNPLVRKALEEPGNGRVLVVDGGGSLRCALLGDMLAENGVKNGWSGILVNGCIRDSADIAKMPLGVKALGTHPLKSSKRDPGQRDVPVSFGGVTVSPGDWVYADGDGILVSKEEL 209
BLAST of NO03G02010 vs. NCBI_GenBank
Match: WP_020164069.1 (RraA family protein [Methyloversatilis discipulorum]) HSP 1 Score: 194.5 bits (493), Expect = 3.500e-46 Identity = 90/155 (58.06%), Postives = 117/155 (75.48%), Query Frame = 0 Query: 67 TADLCDSHEPQLQVAEGNAFRSYGQCASFSGKIVTIKCFENNPLVRTILSEPGNGKVLVVDGGGSLRRALFGDNIAALAVKNGWAGVIIYGAIRDSAVVDRLPLGVKALGTNPIKSSKQHPGDRDVVVAFAGVTFTPGHYVYADQDGIVVSATAL 222 TADLCD E +L++ FRSYG A+F G+I T+K FE+N LVR L PGNG+VLVVDGGGS+RRAL GD IAALAVKNGWAG+++YG IRDSA + + +GV ALGT+P+K+ K++ G D+ V+F G+ F PGHY+YAD DG++V +L Sbjct: 5 TADLCDQFESELRIC-APMFRSYGGRAAFGGQITTLKLFEDNGLVRKALEAPGNGRVLVVDGGGSMRRALVGDQIAALAVKNGWAGIVVYGCIRDSAAIGEMDIGVCALGTHPLKTVKRNEGQVDLTVSFGGIDFVPGHYLYADADGVIVCPRSL 158 The following BLAST results are available for this feature:
BLAST of NO03G02010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G02010 ID=NO03G02010|Name=NO03G02010|organism=Nannochloropsis oceanica|type=gene|length=669bpback to top protein sequence of NO03G02010.1 >NO03G02010.1-protein ID=NO03G02010.1-protein|Name=NO03G02010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=223bpback to top Synonyms
Publications
|