NO03G01880, NO03G01880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G01880 vs. NCBI_GenBank
Match: EWM22948.1 (hypothetical protein Naga_100396g5 [Nannochloropsis gaditana]) HSP 1 Score: 253.4 bits (646), Expect = 1.700e-63 Identity = 134/315 (42.54%), Postives = 175/315 (55.56%), Query Frame = 0 Query: 301 RPIPLIGTNLDYDTEGYLSRFASSIPESPQISTHKLIAWGGCDPMVASQIRNLLDCRPDFRVYRSRNNQGCAAGWNIILKYMAMHDREEIPWAIIFNADMYTPPGSLDRFGQEVWAAIDADPSLCVGFFNARGAGVEGRYCSYVYTRRALEVLGLFDENIYPAYYEDVEMDVRMGRAVAAGVCAPARWFNSSEFVHGKPGVGSKGQSRYVSGTKLMEARMRREG-----DEEMRAVARRWSEKIKRGKKASPLYLHQKWGCRPEKEIDLATCRLQHPFGNAARPLSYWQLDAGRRQCVEEGREGVEGMCEYRLVE 611 RPIPL+ TNLDYDTEG+L R + + HKL+ GGCDP + + + PD V+R R GCA GWN L YM H E++ W ++FN D+Y PPG+LD +EVWA D DP C GFFN AG + + +TR L+ LG FDENIYPAYYED EMD+R R++ +P R F ++ HG+ G + Y SGT ++ R+EG D ++R R S ++ RG +S LY+ KWGC E+E C HPF N PLSYW+LD RR+C+ V C Y L E Sbjct: 129 RPIPLLATNLDYDTEGFLGRLLDGWANAS--ARHKLVVAGGCDPSMLKAVEYVRSQFPDVAVFREREALGCAPGWNRALDYMLYH--EDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFFNVT-AGPDA--VVFAFTRHGLQALGRFDENIYPAYYEDQEMDLRHNRSLEC--TSPPRRFVAATLHHGR-----LGSAEYKSGTSVLRDHWRQEGKRQPRDSQLRKWERDLSNRLDRGFVSSRLYVSAKWGCDAEQE----RCLFAHPFNNPQHPLSYWRLDWARRECILRQERRVRA-CRYTLEE 424
BLAST of NO03G01880 vs. NCBI_GenBank
Match: XP_005707650.1 (hypothetical protein Gasu_16270 [Galdieria sulphuraria] >EME31130.1 hypothetical protein Gasu_16270 [Galdieria sulphuraria]) HSP 1 Score: 136.3 bits (342), Expect = 3.100e-28 Identity = 91/313 (29.07%), Postives = 147/313 (46.96%), Query Frame = 0 Query: 298 ENKRPIPLIGTNLDYDTEGYLSRFASSIPESPQISTHKLIAWGGCDPMVASQIRNLLDCRPDFRVYRSRNNQGCAAGWNIILKYMAMHDREEIPWAIIFNADMYTPPGSLDRFGQEVWAAIDADPSLCVGFFNARGAGVEGRYCSYVYTRRALEVLGLFDENIYPAYYEDVEMDVRMGRAVAAG--VCAPARWFNSSEFVHGKPGVGSKGQSRYVSGTKLMEARMRREGDEEMRAVARRWSEKIKRGKKASPLYLHQKWGCRPEKEIDLATCRLQHPFGNAARPLSYWQLDAGRRQCVEEGREGVEGMCEYRL 609 E+ + IP + T+L+++ + R +S+ + P + H ++ G D R + + ++ + G G+NI L+YM RE W +I N D+Y P GSL + + DP LC+GF + R + Y +V T R ++ G FDEN++PAYY+D E+D+R+ R V VC S+ H G + Q Y+SGT + DE + R + +RG + +P+Y+ +KWGC + D +C + PF + L W+ D R C+E G+ C Y L Sbjct: 59 ESNQSIPFLCTSLEFNHHNFTERLINSV-DYP--TKHFVVVVAGFDSSARQIARWIAENFKQVKIVWESSRIGGTGGFNICLRYMHEFYRER--WGLIVNNDVYFPSGSLKSLKYQTELTLLEDPHLCLGFVSFR--NMHFGYSGFVATSRLVQYAGYFDENLFPAYYDDNELDIRL-REVNRNDDVCTRHDIVFSNGIHH-----GIEDQQGYLSGTAIYL-------DEHENSSFR---DAQRRGSRNNPVYVAEKWGC---QGTDWNSCSYKRPFNKSYLSLKDWRFDPVYRICIEYGKFARHDRCTYDL 345
BLAST of NO03G01880 vs. NCBI_GenBank
Match: XP_005537766.1 (hypothetical protein CYME_CMP077C [Cyanidioschyzon merolae strain 10D] >BAM81730.1 hypothetical protein CYME_CMP077C [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 129.0 bits (323), Expect = 4.900e-26 Identity = 86/311 (27.65%), Postives = 135/311 (43.41%), Query Frame = 0 Query: 304 PLIGTNLDYDTEGYLSRFASSIPESPQISTHKLIAWGGCDPMVASQIRNLLDCRPDFRVYRSRNNQGCAAGWNIILKYMAMHDREEIPWAIIFNADMYTPPGSLDRFGQEVWAAIDADPSLCVGFFNARGAGVEGRYCSYVYTRRALEVLGLFDENIYPAYYEDVEMDVRMGRAVAAGVCAPARWFN---SSEFVHGKPGVGSKGQSRYVSGTKLMEARMRREGDEEMRAV---ARRWSEKIKRGKKASPLYLHQKWGCRPEKEIDLATCRLQHPFGNAARPLSYWQLDAGRRQCVEEGREGVEGMCEYRL 609 P++ +++ G+ +R +SI E + H ++ G DP + + + P + R + G WN ++YM D ++PWA++ N D+ PPGSL E + +P C+G R + + + V +RR ++ G FDENI+PAYYED E +R+ + +G P R F + F H G Y+SGT + GD + + A W+ K PLYL +K C+ HPFG + W D G R C+E G G + C Y + Sbjct: 60 PMLCFGAEFEHHGFTTRLLASIDEPVK---HVVVVLAGEDPSILELEQTIRQDYPFCTIIRKKQRIGNVGIWNTCMRYML--DVAKVPWALLLNNDIMMPPGSLGNVSVEAQRVVQ-NPEFCLGPTKLRNVR-KMLWSALVVSRRTAQIAGFFDENIFPAYYEDNEFSIRIRKIHESG--TPCRLFPVRVRNTFHH-----GPADSPDYISGTVIY---YNGGGDRSKKVIQDRANAWNPHYVALKWDCPLYLWEK-------------CKNMHPFGRSDLSPKDWAFDPGYRHCLETGESGGQFGCRYNV 340
BLAST of NO03G01880 vs. NCBI_GenBank
Match: GAQ78373.1 (hypothetical protein KFL_000120210 [Klebsormidium nitens]) HSP 1 Score: 95.5 bits (236), Expect = 6.000e-16 Identity = 82/299 (27.42%), Postives = 126/299 (42.14%), Query Frame = 0 Query: 300 KRPIPLIGTNLDYDTEGYLSRFASSIPESPQISTHKLIAWGG-------CDPMVASQIRNLLDCRPDFRVYRSRNNQGCAAGWNIILKYMAMHDREEIPWAIIFNADMYTPPGSLDRFGQEVWAAIDADPSLCVGFFNARGAGVEGRYCSYVYTRRALEVLGLFDENIYPAYYEDVEMDVRMGRAVAAGVCAPARWFNSSEFVHGKPGVGSKGQSRYVSGTKLMEARMRREGDEEMRAVARRWSEKIKRGKKASPLYLHQKW-----GCRPEKEIDLATCRLQHPFGNAARPLSYWQLD 587 + PIP+IGTN + L R SI Q+ + G D + A L R F+V RS N+GCA GWN I +H + PW +I N D PG+L + ++ + ++P+ V F+ Y ++ T+RA+ +G+FDENI+PAY ED + D+R+ + P + N +HG P G S + L++ R + ++ K + +Y +KW GC + E Q P GN +R L W D Sbjct: 120 RTPIPVIGTN-TVNNPAMLRRLVLSIDVPVQVIVIVVNTIPGEAGKQDELDMLAAIDELQELIGRSFFKVVRSGCNRGCAGGWNTI-----VHSTLDSPWWLIINDDAAFVPGAL----RTLYDYVSSNPN--VAFYKLTA------YQVFIITQRAVAEVGVFDENIWPAYVEDCDYDLRLKLSGVMVASRPPEFSN----IHGDPESG--------SSSSLIDTRGGGHSG---------YGQRSKCSHSNNRIYYQKKWNLSVPGCGRQLE-----GMFQTPHGNPSRNLDSWTFD 374
BLAST of NO03G01880 vs. NCBI_GenBank
Match: GAQ82940.1 (hypothetical protein KFL_001300030 [Klebsormidium nitens]) HSP 1 Score: 93.2 bits (230), Expect = 3.000e-15 Identity = 80/300 (26.67%), Postives = 128/300 (42.67%), Query Frame = 0 Query: 300 KRPIPLIGTNLDYDTEGYLSRFASSIPESPQISTHKLIAWGGCD--------PMVASQIRNLLDCRPDFRVYRSRNNQGCAAGWNIILKYMAMHDREEIPWAIIFNADMYTPPGSLDRFGQEVWAAIDADPSLCVGFFNARGAGVEGRYCSYVYTRRALEVLGLFDENIYPAYYEDVEMDVRMGRAVAAGVCAPARWFNSSEFVHGKPGVGSKGQSRYVSGTKLMEARMRREGDEEMRAVARRWSEKIKRGKKASPLYLHQKW-----GCRPEKEIDLATCRLQHPFGNAARPLSYWQLD 587 + PIP+IGTN + L R SI Q+ + G D + +++ L+ R F+V RS N+GCA GWN I+ H + PW +I N D PG+L + ++ + ++P V F+ Y ++ T+RA+ +G+FDENI+PAY ED + D+R+ + P + N +HG P G + + L+ R + ++ K + +Y +KW GC + E T P GN +R L+ W D Sbjct: 154 RTPIPVIGTN-TVNNPAMLRRLVLSIDVPVQVIVIVVNTIPGEDGKQDELDMMAIIDELQELIG-RSFFKVVRSGCNRGCAGGWNTII-----HSTLDSPWWLIVNDDAAFVPGAL----RTLYDYVSSNPD--VAFYKLT------TYQVFLITKRAVTEVGVFDENIWPAYGEDCDYDLRLQLSGVMVASRPPEFSN----IHGDPESG--------ASSSLINTRGGGHSG---------YGQRSKCSHSNNRIYYQKKWNLSVPGCGRQLEGMFRT-----PHGNPSRSLASWTFD 408
BLAST of NO03G01880 vs. NCBI_GenBank
Match: GAQ86300.1 (hypothetical protein KFL_002810080 [Klebsormidium nitens]) HSP 1 Score: 83.2 bits (204), Expect = 3.100e-12 Identity = 79/299 (26.42%), Postives = 118/299 (39.46%), Query Frame = 0 Query: 300 KRPIPLIGTNLDYDTEGYLSRFASSIPESPQISTHKLIAWGG-------CDPM-VASQIRNLLDCRPDFRVYRSRNNQGCAAGWNIILKYMAMHDREEIPWAIIFNADMYTPPGSLDRFGQEVWAAIDADPSLCVGFFNARGAGVEGRYCSYVYTRRALEVLGLFDENIYPAYYEDVEMDVRMGRAVAAGVCAPARWFNSSEFVHGKPGVGSKGQSRYVSGTKLMEARMRREGDEEMRAVARRWSEKIKRGKKASPLYLHQKWGCRPEKEIDLATCRLQHPFGNAARPLSYWQLDAGRR 591 + PIP+IG N + L R SI Q+ + G D M V +++ L+ R F+V RS N+GCA GWN I+ H PW ++ N D PG+L V D V + G V +V T+ A+ +G+FDENI+PAY ED + D+R+ + P + N +HG P G + + L+ +R D R + + +Y +KW + P GN +R L+ W D R Sbjct: 78 RTPIPVIGMN-TVNNPKMLRRLVLSIDVPVQVIVIVVNTIPGEAGKQDEQDMMAVIDELQELIG-RAFFKVIRSGCNRGCAGGWNSII-----HSTSSAPWWLVINDDAAFTPGALRTLHDYVSGTPD------VAVYKLTGFQV------FVLTQLAVAKVGVFDENIWPAYAEDCDYDLRIQLSGVLVAPRPPEFTN----IHGDPESG--------ASSSLVTSRGGGHPDYGRRNQCSHTNNR---------MYYQKKWNLSSQSCGKQLEGMFLTPHGNPSRSLASWTFDEALR 336
BLAST of NO03G01880 vs. NCBI_GenBank
Match: GAQ85850.1 (hypothetical protein KFL_002570180 [Klebsormidium nitens]) HSP 1 Score: 75.1 bits (183), Expect = 8.400e-10 Identity = 77/305 (25.25%), Postives = 125/305 (40.98%), Query Frame = 0 Query: 300 KRPIPLIGTNLDYDTEGYLSRFASSIP---ESPQISTHKLIAWGGCDPMVASQIRNLLDCRPD--FRVYRSRNNQGCAAGWNIILKYMAMHDREEIPWAIIFNADMYTPPGSLDRFGQEVWAAIDADPSLCVGFFNARGAGVEGRYCSYVYTRRALEVLGLFDENIYPAYYEDVEMDVRMGRAVA-----AGVC------APARWFNSSEFVHGKPGVGSKGQSRYVSGTKLMEARMRREG--DEEMRAVARRWSEKIKRGKKASPLYLHQKWGCRPEKEIDLATCRLQHPFGNAARPLSYWQLD 587 +RPIP++GT + + +L R SI QI + D V + L P V N G GWN + ++ + PW ++ + D+ PG+L R E+ DP F A + ++ + R AL+++G++DEN++P+YY+D E RM RA A +C R F+ +HG GS+ Y + L E R G E R AR+ + Y W +P+++++++ + PF N R + W LD Sbjct: 127 RRPIPVVGTPV-LNNGHWLKRLVYSIDVPVRMIQIIVGTMPGSKTMDTSVRDALEELNQRLPPGFLSVVDMGCNMGSGGGWNAVFEH-----NLDAPWYLLVSGDVAFAPGALARIPDEL-----EDPQNEKIF-----AFMYSQFRFFALRREALDLVGVWDENMWPSYYDDNEYQARMERAQALTPGVQRICYIGEPMPDGRRFDEPAHIHG----GSELLGPY-ADVWLEEGAERISGALRAEPRLAARKGPSGFNSLRFMMNKYNFSYWEMKPKEQLEIS---WRLPFNNPERGIPRWVLD 407
BLAST of NO03G01880 vs. NCBI_GenBank
Match: XP_005779447.1 (hypothetical protein EMIHUDRAFT_236095 [Emiliania huxleyi CCMP1516] >EOD27018.1 hypothetical protein EMIHUDRAFT_236095 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 72.0 bits (175), Expect = 7.200e-9 Identity = 39/106 (36.79%), Postives = 52/106 (49.06%), Query Frame = 0 Query: 366 RNNQGCAAGWNIILKYMAMHDREEIPWAIIFNADMYTPPGSLDRFGQEVWAAIDADPS----LCVGFFNARGAGVEGRYCSYVYTRRALEVLGLFDENIYPAYYED 468 R N GCAA WN I M ++ PW +I NAD+ PG+L VWA + A P +C F+ + ++ RAL +G FDEN +PAY ED Sbjct: 90 RENLGCAAAWNTI-----MLQNQQSPWWLIVNADVSFRPGTLRTIASHVWAGLLASPGGRDPVCNWLFHG--------WSAFALANRALHRVGTFDENFWPAYSED 182
BLAST of NO03G01880 vs. NCBI_GenBank
Match: CUF26456.1 (beta galactofuranosyl glycosyltransferase, putative [Bodo saltans]) HSP 1 Score: 71.2 bits (173), Expect = 1.200e-8 Identity = 45/175 (25.71%), Postives = 80/175 (45.71%), Query Frame = 0 Query: 303 IPLIGTNLDYDTEGYLSRFASSIPESPQISTHKLIAWGGCDPMVASQIRNLLDCRPDFRVYRSRNNQGCAAGWNIILKYMAMHDREEIPWAIIFNADMYTPPGSLDRFGQEVWAAIDADPSLCVGFFNARGAGVEGRYCSYVYTRRALEVLGLFDENIYPAYYEDVEMDVRMGRA 478 +P++ T + +D + L R SI + H + W D + + + L + + N G +A N+ L+ + PW + N D+ PP ++ + +A + + G G++ + +++ TRRA+EV GL DEN YPAY+EDV+ R+ A Sbjct: 110 VPVVITPMFHDGD-VLPRMLESINVPVR---HFVFVWNSNDNDIKNIVEELKRIPFGITIAHNPENFGFSASINVGLRKGLEMSAADCPWYWVINCDVTFPPETMPEMTRRTYATNISSMGMMY------GPGID--HYAFIVTRRAVEVAGLMDENFYPAYFEDVDWRWRVNLA 272
BLAST of NO03G01880 vs. NCBI_GenBank
Match: XP_005785564.1 (hypothetical protein EMIHUDRAFT_202327 [Emiliania huxleyi CCMP1516] >EOD33135.1 hypothetical protein EMIHUDRAFT_202327 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 68.9 bits (167), Expect = 6.100e-8 Identity = 40/108 (37.04%), Postives = 53/108 (49.07%), Query Frame = 0 Query: 366 RNNQGCAAGWNIILKYMAMHDREEIPWAIIFNADMYTPPGSLDRFGQEVWAAIDA------DPSLCVGFFNARGAGVEGRYCSYVYTRRALEVLGLFDENIYPAYYED 468 R N GCAA WN I M ++ PW +I NAD+ PG+L VWA + A DP +C F+ + ++ RAL +G FDEN +PAY ED Sbjct: 90 RENLGCAAAWNTI-----MLQNQQSPWWLIVNADVSFRPGTLRTIASHVWAGLLASTPGGRDP-VCNWLFHG--------WSAFALANRALHRVGTFDENFWPAYSED 183 The following BLAST results are available for this feature:
BLAST of NO03G01880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 12
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G01880 ID=NO03G01880|Name=NO03G01880|organism=Nannochloropsis oceanica|type=gene|length=2416bpback to top protein sequence of NO03G01880.1 >NO03G01880.1-protein ID=NO03G01880.1-protein|Name=NO03G01880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=612bpback to top Synonyms
Publications
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