NO03G01860, NO03G01860 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G01860 vs. NCBI_GenBank
Match: EWM29635.1 (heme steroid binding domain-containing [Nannochloropsis gaditana]) HSP 1 Score: 480.7 bits (1236), Expect = 3.000e-132 Identity = 229/282 (81.21%), Postives = 250/282 (88.65%), Query Frame = 0 Query: 1 MLESLLETLEALRHDKTAATIFVATVVVTITFFYWITKDPPLPKGPGGKDAGEEPDPPRNFTAAQLREFTGATKDEPIYVALQGEVYDVSSGRDFYGPEGVYGGFAGHDVTRAFALNSLEEKDLDNPNLDDLPYSAKESLHGWVEKYKYYKCYPVVGRLVTPPLGLKLTTAELAKHKGDEEKEG----MPEGWAAAPIYVAVKGNVFDMSFGGRLFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRDLSDLTDRQRQTLDEWVEKFRNDRKYPVVGTLVD 279 M ES L+TLEA R DKTAA + ATV VT+T FYW+TKDPPLPKGPGGK EEP+PPRNFTA QLREFTG +D+PIYVALQG+VYDVSS RDFYGP+GVYGGFAGHDVTRAFALNSLEEKDLD+PNL+DL Y+ KESLHGWVEKYKYYKCYPVVGRLVTPP GL LT AE+A++KG+E KEG +PEGWAA PIYVAV G VFDMSFGGR+FYGPGGPYHFLAGKDGSRPLAKMSFEKADAESR+LSDLTDRQRQTL+EWVEKF N RKYPVVG L+D Sbjct: 1 MFESFLQTLEAFRQDKTAAAMLAATVAVTVTVFYWVTKDPPLPKGPGGKAPDEEPEPPRNFTATQLREFTGTKEDDPIYVALQGDVYDVSSARDFYGPDGVYGGFAGHDVTRAFALNSLEEKDLDDPNLEDLTYTQKESLHGWVEKYKYYKCYPVVGRLVTPPSGLSLTLAEIAQYKGEEPKEGDAQTIPEGWAAPPIYVAVAGKVFDMSFGGRMFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRNLSDLTDRQRQTLEEWVEKFINGRKYPVVGKLID 282
BLAST of NO03G01860 vs. NCBI_GenBank
Match: XP_002184247.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44425.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 206.1 bits (523), Expect = 1.400e-49 Identity = 118/292 (40.41%), Postives = 167/292 (57.19%), Query Frame = 0 Query: 1 MLESLLETLEALRHDKTAATIFVATVVVTITFFYWI------TKDPPLPKGPGGKDAGEEPDPPRNFTAAQLREFTGATKD-----EPIYVALQGEVYDVSSGRDFYGPEGVYGGFAGHDVTRAFALNSLEEKDLDN-PNLDDLPYSAKESLHGWVEKYKYYKCYPVVGRLV----TPPLGLKLTTAELAKHKGDEEKEGMPEGWAAAPIYVAVKGNVFDMSFGGRLFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRDLSDLTDRQRQTLDEWVEKFRNDRKYPVVGTL 277 +L+ L ETL+A + + +V + Y TKD P + E+PDPPRNFTA QLR F G +D +P+Y+++ G V+DVS GR+FYGP+G Y FAG + A A S +E+ LD+ L K L GW++K+ YY+ YP+ GRL+ P L+ ELAK+ G K PEG+A PIY+ VFDMSFGG FYG GGPYH AG D SR LAKMS ++ D ++ D+SD++++Q + +++W++ F + YP+VG L Sbjct: 6 LLQQLRETLDAWTGVPGSLGYLLIIGLVVAGYSYTSASLIADTKDMP--------EEEEQPDPPRNFTAKQLRYFNGEKEDKGDDLKPVYLSVNGTVFDVSDGRNFYGPDGPYAAFAGRECGVALAKMSFDEEHLDDFDGCTKLNPGEKMELEGWIDKFTYYRPYPIKGRLIPDQCMPSPERVLSKEELAKNNG---KGPTPEGYATPPIYIGAGDKVFDMSFGGVTFYGEGGPYHRFAGYDVSRSLAKMSLDEEDIKNSDVSDMSEKQLKIMNDWIKTFEERKSYPLVGKL 286
BLAST of NO03G01860 vs. NCBI_GenBank
Match: EJK68373.1 (hypothetical protein THAOC_10451 [Thalassiosira oceanica]) HSP 1 Score: 202.2 bits (513), Expect = 2.100e-48 Identity = 123/272 (45.22%), Postives = 156/272 (57.35%), Query Frame = 0 Query: 22 FVATVVVTITFFYWITKDPPLPKGPGGKDAGE---EPDPPRNFTAAQLREFTGATKDE------PIYVALQGEVYDVSSGRDFYGPEGVYGGFAGHDVTRAFALNSLEEKDLDNPN-LDDLPYSAKESLHGWVEKYKYYKCYPVVGRLV----TPPLGLKLTTAELAKHKG--DEEKEGMPEGWAAAPIYVAVKGNVFDMSFGGRLFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRDLSDLTDRQRQTLDEWVEKFRNDRKYPVVGTLV 278 +V V+T+ + W+ D G D GE EP+PPRNFTA QLR F G TKDE P+Y+++ G V+DVS GRDFYGP G Y FAG + A A S +E LDN +L K L W EK+++Y+CYP++GRLV PP + EL+K G DE +G EG+A PI V VFD SFGG YG GPY+ AGKD SR LA MSF+ D E+ D+SDL +++ L +WV F N + YPVVG LV Sbjct: 26 YVLLFVLTLIAYIWM-NDGFQSNGGVTTDVGEEEGEPEPPRNFTAKQLRHFDG-TKDEKTDEEKPVYLSVSGTVFDVSKGRDFYGP-GPYEQFAGRECGVALATMSFDETLLDNVEACKELGVGDKAELDNWKEKFEHYRCYPIMGRLVPDAKLPPSDRVVAVEELSKFNGLSDEVPKGEYEGYARMPILVGALDKVFDCSFGGVPMYGKDGPYNKFAGKDVSRALALMSFDPKDIENADISDLEEKKITILKDWVNTFENKKGYPVVGKLV 294
BLAST of NO03G01860 vs. NCBI_GenBank
Match: OQS01306.1 (heme/steroid binding domain-containing protein [Achlya hypogyna]) HSP 1 Score: 196.8 bits (499), Expect = 8.800e-47 Identity = 108/221 (48.87%), Postives = 137/221 (61.99%), Query Frame = 0 Query: 58 PRNFTAAQLREFTGATKDEPIYVALQGEVYDVSSGRDFYGPEGVYGGFAGHDVTRAFALNSLEEKDLDNPNLDDLPYSAKESLHGWVEKYKYYKCYPVVGRLVTPPLGLKLTTAELAKHKGDEEKEGMPEGWAAAPIYVAVKGNVFDMSFGGRLFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRDLSDLTDRQRQTLDEWVEKFRNDRKYPVVGTLVD 279 PR FT A+LR F G PIYVA++GE+YDVSS DFYGP Y FAG + RA A S E KDLDN ++ DL + E L+ W+ K++ + YPVVGRL+ LT AELAK + PIYVA+KG ++D++ GGR YGP G Y AG+D SR LA MSF+ A+ E+ L DLTD QR+TLD+W KF++ KY VVG L+D Sbjct: 47 PRYFTPAELRAFNG-EDGAPIYVAIKGEIYDVSSKADFYGPGAGYHLFAGREAARALAKMSFEAKDLDNTDVSDLNFMENEVLNDWIVKFRDFNSYPVVGRLLDQ---RDLTRAELAK-------------YTKQPIYVAIKGTIYDVTLGGREHYGPNGGYKLFAGQDASRALALMSFDAANLETPTLDDLTDTQRKTLDDWEAKFKS--KYGVVGKLLD 248
BLAST of NO03G01860 vs. NCBI_GenBank
Match: CBJ32444.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 186.8 bits (473), Expect = 9.100e-44 Identity = 101/221 (45.70%), Postives = 134/221 (60.63%), Query Frame = 0 Query: 59 RNFTAAQLREFTGATKDEPIYVALQGEVYDVSSGRDFYGPEGVYGGFAGHDVTRAFALNSLEEKDLDNPNLDDLPYSAKESLHGWVEKYKYYKCYPVVGRLVTPPL-GLKLTTAELAKHKGDEEKEGMPEGWAAAPIYVAVKGNVFDMSFGGRLFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRDLSDLTDRQRQTLDEWVEKFRNDRKYPVVGTLVD 279 RNFT QL EF G + P YVAL+GEV+DVSS + Y G Y FAGHD + + A SL+ DL+ + +L ESL GWVEKYK + YPVVG++VTPP + + EL G + +PEG+AA PIYV V+G V+DMS+GG YGPG Y+ AG+D S LAKMSF ++ D+S L+ L +W K ++KYPV+GT+ + Sbjct: 56 RNFTIEQLHEFDGRDEATPAYVALRGEVFDVSSKPEHYKVGGGYHLFAGHDASYSLATGSLDPADLEK-SWSELNVMENESLDGWVEKYKNFSEYPVVGKVVTPPAQPREFSLEELRPFDGTSD---IPEGYAAPPIYVGVRGKVYDMSYGGAEMYGPGKSYNLFAGRDASVALAKMSFAPEHLDNPDMSTLSKEDMTVLQDWASKM--EKKYPVIGTIAN 270
BLAST of NO03G01860 vs. NCBI_GenBank
Match: XP_002286676.1 (steroid binding protein 1 [Thalassiosira pseudonana CCMP1335] >EED96317.1 steroid binding protein 1 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 185.7 bits (470), Expect = 2.000e-43 Identity = 101/233 (43.35%), Postives = 139/233 (59.66%), Query Frame = 0 Query: 59 RNFTAAQLREFTGA-----TKDEPIYVALQGEVYDVSSGRDFYGPEGVYGGFAGHDVTRAFALNSLEEKDLDN-PNLDDLPYSAKESLHGWVEKYKYYKCYPVVGRLV----TPPLGLKLTTAELAKHKGDEEKEGMP-----EGWAAAPIYVAVKGNVFDMSFGGRLFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRDLSDLTDRQRQTLDEWVEKFRNDRKYPVVGTL 277 RNFT QLR F G +D+P+Y++L G V+DVS GR FYGP G Y FAG + A A S +E LD+ + L K L W+EK+++Y+CYP++G+L+ P ++ ELAK G +KEG P +G+ PIY+ VFD+SFGG YG GPY+ AGKD SR LA MSF+ DA + D+SDL ++Q + L +WV+KF ++ YP+VG L Sbjct: 23 RNFTVKQLRHFDGTKEEQLDEDKPVYLSLGGTVFDVSKGRSFYGPGGPYEVFAGRECGAALAKMSFDESLLDDIAACETLGVGDKTELENWLEKFEHYRCYPIMGKLIPDDKLPSPDRVISKEELAKFDG--QKEGTPTEDELKGYGTYPIYLGAYDKVFDVSFGGVPMYGKDGPYNRFAGKDASRALALMSFDPNDAANPDISDLEEKQVKVLHDWVKKFEENKGYPIVGRL 253
BLAST of NO03G01860 vs. NCBI_GenBank
Match: GAX25929.1 (hypothetical protein FisN_6Hh033 [Fistulifera solaris]) HSP 1 Score: 182.2 bits (461), Expect = 2.200e-42 Identity = 99/234 (42.31%), Postives = 144/234 (61.54%), Query Frame = 0 Query: 56 DPPRNFTAAQLREFTGATKD-------EPIYVALQGEVYDVSSGRDFYGPEGVYGGFAGHDVTRAFALNSLEEKDLD-NPNLDDLPYSAKESLHGWVEKYKYYKCYPVVGRLV--TPPLGLKLTTAELAKHKGDEEKEGMPEGWAAAPIYVAVKGNVFDMSFGGRLFYGPGGPYHFLAGKDGSRPLAKMSF-EKADAESRDLSDLTDRQRQTLDEWVEKFRNDRKYPVVGTLVD 279 +P RNFTA QLR F G +D +P+Y+++ G V+DVS GRDFYGP G Y FAG + A + + +E+ LD + + L + L W+EK++YY+ YPV+G+L+ P + ELAK+ G E +PEG+A PIY+AV +VFDMSFGG FYGPGGPYH LAG+D +R LA M ++ A + + L ++Q +T+++W + F + YP+VG L + Sbjct: 62 EPLRNFTAQQLRHFNGELEDGVPNPQHKPVYLSVAGTVFDVSDGRDFYGPGGPYATFAGRECGIALSKFAFDEQYLDISVDRTQLNAGERMELDQWLEKFQYYRHYPVMGKLIFDMPDPHRIIRQEELAKYNGTPEAP-IPEGYATPPIYIAVDQDVFDMSFGGVSFYGPGGPYHKLAGRDATRALATMRLDDEMFAMTGEEEPLNEKQIKTMNDWKKTFTERKMYPIVGKLAE 294
BLAST of NO03G01860 vs. NCBI_GenBank
Match: GAX28145.1 (hypothetical protein FisN_6Lh033 [Fistulifera solaris]) HSP 1 Score: 181.8 bits (460), Expect = 2.900e-42 Identity = 105/275 (38.18%), Postives = 157/275 (57.09%), Query Frame = 0 Query: 17 TAATIFVATVVVTITFFYWIT----KDPPLPKGPGGKDAGEEPDPPRNFTAAQLREFTGATKDE-------PIYVALQGEVYDVSSGRDFYGPEGVYGGFAGHDVTRAFALNSLEEKDLDNP-NLDDLPYSAKESLHGWVEKYKYYKCYPVVGRLV--TPPLGLKLTTAELAKHKGDEEKEGMPEGWAAAPIYVAVKGNVFDMSFGGRLFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRDLSD-LTDRQRQTLDEWVEKFRNDRKYPVVGTL 277 T+ ++ +V+ + Y +T PK + E +P RNFTA QLR F G +D+ P+Y+++ G V+DVS GR+FYGP G Y FAG + A + + +E+ LD P + L + L W+EK++YY+ YP+VG+L+ P ++ ELAK+ G E +PEG+A PIY+AV +VFDMSFGG FYGPGGPYH LAG+D +R LA M + + + L ++Q +T+++W + F + YP+VG L Sbjct: 18 TSGSLGYICIVLAVYIGYHLTTTVMSSSATPKQSTPQHEEGEKEPLRNFTAQQLRHFNGELEDDGPNPQHKPVYLSVAGTVFDVSDGRNFYGPGGPYAAFAGRECGIALSKYAFDEQYLDIPVDRTQLNAGERMELDQWLEKFQYYRNYPLVGKLIFEMPDPHRIISREELAKYNGTLEAP-IPEGYATPPIYIAVDQDVFDMSFGGVSFYGPGGPYHKLAGRDATRALATMRLDDEMFTTTGKEEPLNEKQSKTMNDWKKTFAERKMYPIVGKL 291
BLAST of NO03G01860 vs. NCBI_GenBank
Match: CCA26113.1 (heme/steroid binding domaincontaining protein putati [Albugo laibachii Nc14]) HSP 1 Score: 172.2 bits (435), Expect = 2.300e-39 Identity = 96/220 (43.64%), Postives = 131/220 (59.55%), Query Frame = 0 Query: 59 RNFTAAQLREFTGATKDEPIYVALQGEVYDVSSGRDFYGPEGVYGGFAGHDVTRAFALNSLEEKDLDNPNLDDLPYSAKESLHGWVEKYKYYKCYPVVGRLVTPPLGLKLTTAELAKHKGDEEKEGMPEGWAAAPIYVAVKGNVFDMSFGGRLFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRDLSDLTDRQRQTLDEWVEKFRNDRKYPVVGTLVD 279 R +T +L F G +PIYV L EVYDV+ ++YGP+G Y FAG D +RA A S ++ +++N L+DL S+ ++L WV K+K +K YPVVGRL+ LT EL K G + IYVA+ G ++D++ G FYGP G Y AG D SR LA MSF++ + + L DLTD Q++TL +WV KF ++KYPVVG LVD Sbjct: 105 RYYTNEELLVFNG-VDGKPIYVCLLDEVYDVTERAEYYGPDGNYHIFAGRDASRALATMSFDQVEIENDVLEDLRSSSLQTLQEWVTKFKVHKKYPVVGRLLRHK---NLTKEELKKFNGTDN--------IRKTIYVAICGKIYDVTMDGGTFYGPEGSYKAFAGNDASRALALMSFDQKNLTNTSLDDLTDTQKKTLKDWVIKF--EKKYPVVGDLVD 310
BLAST of NO03G01860 vs. NCBI_GenBank
Match: XP_012193992.1 (hypothetical protein SPRG_00508, partial [Saprolegnia parasitica CBS 223.65] >KDO35760.1 hypothetical protein SPRG_00508, partial [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 169.5 bits (428), Expect = 1.500e-38 Identity = 94/219 (42.92%), Postives = 128/219 (58.45%), Query Frame = 0 Query: 59 RNFTAAQLREFTGATKDEPIYVALQGEVYDVSSGRDFYGPEGVYGGFAGHDVTRAFALNSLEEKDLDNPNLDDLPYSAKESLHGWVEKYKYYKCYPVVGRLVTPPLGLKLTTAELAKHKGDEEKEGMPEGWAAAPIYVAVKGNVFDMSFGGRLFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRDLSDLTDRQRQTLDEWVEKFRNDRKYPVVGTLV 278 R FT +LR F G +PIYVA++G+VYDVS+ DFYGP Y FAG + RA A S E DLDN ++ +L + KE L+ W+ K++ + YP+VGR++ + +T ELA + PIYVAVKG ++D++ GG YGP G Y AGKD SR LA MSF+ + E+ L DL + Q +TL++W KF KY VVG L+ Sbjct: 50 RYFTLDELRPFNG-ENGKPIYVAIKGDVYDVSTKADFYGPGAGYHLFAGRETARALAKMSFEAADLDNTDISELNFMEKEVLNDWIVKFRDFNSYPIVGRVL---MQKDMTRDELAT-------------YTTMPIYVAVKGTIYDVTIGGADHYGPNGGYKLFAGKDASRALALMSFDAINLENPHLDDLNETQTKTLNDWEAKFA--AKYGVVGKLL 249 The following BLAST results are available for this feature:
BLAST of NO03G01860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G01860 ID=NO03G01860|Name=NO03G01860|organism=Nannochloropsis oceanica|type=gene|length=1431bpback to top protein sequence of NO03G01860.1 >NO03G01860.1-protein ID=NO03G01860.1-protein|Name=NO03G01860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=279bpback to top protein sequence of NO03G01860.2 >NO03G01860.2-protein ID=NO03G01860.2-protein|Name=NO03G01860.2|organism=Nannochloropsis oceanica|type=polypeptide|length=322bpback to top Synonyms
Publications
|