NO03G01850, NO03G01850 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G01850 vs. NCBI_GenBank
Match: EWM29626.1 (tropinone reductase [Nannochloropsis gaditana]) HSP 1 Score: 331.3 bits (848), Expect = 2.200e-87 Identity = 160/200 (80.00%), Postives = 177/200 (88.50%), Query Frame = 0 Query: 2 ATPPSTSSIGSPTRWRLEGKTVFITGGTKGIGKAIVEEFGALGARVFTCARSGPDLVACLKEWTSKGYEVEGMAVDLSDSIARRAVMEQVAGSFVGRLDVLVNNVGTNVRKPTVQYTQEEYHNIMDVNLRSTYHLCQLAHPLLKKGGSSCVVNVGSVAGVTAIKSGSIYAMSKAAMAQLSKNLACEWAPDGIRVNTVAPW 202 ATPP IGSP RWRL+G+TV TGGTKGIGKAIVEEF +LGARVFTCARS DL ACLKEWT+KGYEVEG+AVD+SDS ARRA+MEQVAGSFVGRLDVLVNNVGTN+RKPT QYT+++Y IMD+NL+STYHLCQLAHPLLKK G CV+NVGSVAGV IKSGS+Y ++KAAM QLSKNLACEWA DGIRVNTVAPW Sbjct: 4 ATPP----IGSPARWRLDGQTVLCTGGTKGIGKAIVEEFASLGARVFTCARSASDLAACLKEWTAKGYEVEGIAVDVSDSDARRAMMEQVAGSFVGRLDVLVNNVGTNIRKPTAQYTEDQYDKIMDINLKSTYHLCQLAHPLLKKAGKGCVINVGSVAGVIGIKSGSVYGLTKAAMVQLSKNLACEWASDGIRVNTVAPW 199
BLAST of NO03G01850 vs. NCBI_GenBank
Match: XP_004307471.1 (PREDICTED: tropinone reductase homolog [Fragaria vesca subsp. vesca]) HSP 1 Score: 239.6 bits (610), Expect = 8.500e-60 Identity = 114/196 (58.16%), Postives = 145/196 (73.98%), Query Frame = 0 Query: 6 STSSIGSPTRWRLEGKTVFITGGTKGIGKAIVEEFGALGARVFTCARSGPDLVACLKEWTSKGYEVEGMAVDLSDSIARRAVMEQVAGSFVGRLDVLVNNVGTNVRKPTVQYTQEEYHNIMDVNLRSTYHLCQLAHPLLKKGGSSCVVNVGSVAGVTAIKSGSIYAMSKAAMAQLSKNLACEWAPDGIRVNTVAPW 202 ST ++ +P RW L G T +TGGT+GIG A+VEE +LGA VFTC+R+ +L CLKEW++KG+ + G+ D+S R +MEQV SF GRL++ VNNVGTN+RKPT +YT EEY +M NL STYHLCQ+AHPLLK G+ VV + SVAG+ ++ SG+IYA SKAA+ QL+KNLACEWA D IR N VAPW Sbjct: 4 STRNLATP-RWSLTGTTALVTGGTRGIGYAVVEELASLGAYVFTCSRNAEELERCLKEWSAKGFRITGIVCDVSVKSEREKLMEQVGVSFAGRLNIFVNNVGTNIRKPTTEYTFEEYSKVMSTNLESTYHLCQIAHPLLKGSGAGSVVFISSVAGLVSLGSGTIYAASKAAINQLTKNLACEWAKDNIRSNAVAPW 198
BLAST of NO03G01850 vs. NCBI_GenBank
Match: XP_018821879.1 (PREDICTED: tropinone reductase homolog At5g06060-like [Juglans regia]) HSP 1 Score: 234.2 bits (596), Expect = 3.600e-58 Identity = 109/194 (56.19%), Postives = 137/194 (70.62%), Query Frame = 0 Query: 8 SSIGSPTRWRLEGKTVFITGGTKGIGKAIVEEFGALGARVFTCARSGPDLVACLKEWTSKGYEVEGMAVDLSDSIARRAVMEQVAGSFVGRLDVLVNNVGTNVRKPTVQYTQEEYHNIMDVNLRSTYHLCQLAHPLLKKGGSSCVVNVGSVAGVTAIKSGSIYAMSKAAMAQLSKNLACEWAPDGIRVNTVAPW 202 + + RW L+GKT +TGGT+GIG A+VEE GA V+TC+R+ +L CLKEW KG+ V G D S R ++EQVA F G+L++L+NNVGTN+RKPT++YT EEY +M N STYHLCQ+AHPLLK G +V + SVAG+ +I SGSIYA SKAA+ QL+KNLACEWA D IR N VAPW Sbjct: 6 TGVKGSARWSLKGKTALVTGGTRGIGHAVVEELAGFGASVYTCSRNEAELGKCLKEWEGKGFVVSGSVCDASSRAHRERLLEQVASVFNGKLNILINNVGTNIRKPTIEYTAEEYSTLMATNFESTYHLCQIAHPLLKASGMGSIVFISSVAGLVSIGSGSIYAASKAAINQLTKNLACEWAKDNIRTNCVAPW 199
BLAST of NO03G01850 vs. NCBI_GenBank
Match: XP_024192599.1 (tropinone reductase homolog At5g06060-like [Rosa chinensis] >PRQ59265.1 putative oxidoreductase [Rosa chinensis]) HSP 1 Score: 233.8 bits (595), Expect = 4.700e-58 Identity = 114/193 (59.07%), Postives = 139/193 (72.02%), Query Frame = 0 Query: 9 SIGSPTRWRLEGKTVFITGGTKGIGKAIVEEFGALGARVFTCARSGPDLVACLKEWTSKGYEVEGMAVDLSDSIARRAVMEQVAGSFVGRLDVLVNNVGTNVRKPTVQYTQEEYHNIMDVNLRSTYHLCQLAHPLLKKGGSSCVVNVGSVAGVTAIKSGSIYAMSKAAMAQLSKNLACEWAPDGIRVNTVAPW 202 S+ SP RW L G T +TGGT+GIG A VEE ALGA VFTC+R+ +L CLKEW+ KG V G+ D+S R +MEQV SF G+L++ VNNVGTN+RKPT +YT EEY +M NL STY+LCQLAHPLLK G+ +V + SVAG +I SG+IYA +KAA+ QL+KNLACEWA D IR N VAPW Sbjct: 4 SLASP-RWSLRGTTALVTGGTRGIGYAAVEELAALGAFVFTCSRNSAELERCLKEWSGKGLRVTGVVCDVSTKSEREKLMEQVGVSFTGKLNIFVNNVGTNIRKPTTEYTSEEYSKVMATNLESTYNLCQLAHPLLKASGAGSIVFISSVAGSVSIGSGTIYAATKAAINQLTKNLACEWAKDNIRSNAVAPW 195
BLAST of NO03G01850 vs. NCBI_GenBank
Match: XP_010228815.1 (tropinone reductase homolog At5g06060 [Brachypodium distachyon] >KQK22382.1 hypothetical protein BRADI_1g66910v3 [Brachypodium distachyon]) HSP 1 Score: 231.5 bits (589), Expect = 2.300e-57 Identity = 114/201 (56.72%), Postives = 141/201 (70.15%), Query Frame = 0 Query: 1 MATPPSTSSIGSPTRWRLEGKTVFITGGTKGIGKAIVEEFGALGARVFTCARSGPDLVACLKEWTSKGYEVEGMAVDLSDSIARRAVMEQVAGSFVGRLDVLVNNVGTNVRKPTVQYTQEEYHNIMDVNLRSTYHLCQLAHPLLKKGGSSCVVNVGSVAGVTAIKSGSIYAMSKAAMAQLSKNLACEWAPDGIRVNTVAPW 202 MA ++ G+P RW L GKT +TGGT+GIG+A+VEE ALGA V TC+R +L LKEW +KG+ V DLS R + +VA F G+LD+LVNNVGTN+RKPT +Y+ E+Y +M NL S YHLCQLAHPLLK GS +V V SV GV A+ SG+IYAM+K A+ QL+KNLACEWA DGIR N+VAPW Sbjct: 1 MAAAETSGKAGAPGRWSLHGKTALVTGGTRGIGRAVVEELAALGAAVHTCSRKESELGERLKEWEAKGFRVTTSVCDLSVRDQRDRLAGEVAERFGGKLDILVNNVGTNIRKPTTEYSSEDYSFVMATNLESGYHLCQLAHPLLKASGSGSIVFVSSVCGVVAVFSGTIYAMTKGAINQLTKNLACEWAKDGIRANSVAPW 201
BLAST of NO03G01850 vs. NCBI_GenBank
Match: XP_012460282.1 (PREDICTED: tropinone reductase homolog At5g06060-like [Gossypium raimondii] >KJB76107.1 hypothetical protein B456_012G072100 [Gossypium raimondii]) HSP 1 Score: 231.5 bits (589), Expect = 2.300e-57 Identity = 111/188 (59.04%), Postives = 135/188 (71.81%), Query Frame = 0 Query: 14 TRWRLEGKTVFITGGTKGIGKAIVEEFGALGARVFTCARSGPDLVACLKEWTSKGYEVEGMAVDLSDSIARRAVMEQVAGSFVGRLDVLVNNVGTNVRKPTVQYTQEEYHNIMDVNLRSTYHLCQLAHPLLKKGGSSCVVNVGSVAGVTAIKSGSIYAMSKAAMAQLSKNLACEWAPDGIRVNTVAPW 202 +RW L G T +TGGT+GIG AIVEE LGA V+TC+R+G +L CLKEW SKG+ V G D S R +++ VA F G+L++LVNNVGTN+ KPTV+YT EEY +M N S+YH CQLAHPLLK G +V + SVAG+T I+SGSIYA +KAAM QL+KNLACEWA D IR N VAPW Sbjct: 13 SRWFLNGMTALVTGGTRGIGHAIVEELAGLGASVYTCSRNGDELNKCLKEWESKGFLVNGSVCDASSKDQRLKLIDNVASVFNGKLNILVNNVGTNISKPTVEYTAEEYSKLMSTNFDSSYHFCQLAHPLLKASGKGSIVFISSVAGLTHIESGSIYAPAKAAMNQLTKNLACEWAKDNIRTNCVAPW 200
BLAST of NO03G01850 vs. NCBI_GenBank
Match: XP_003558258.1 (tropinone reductase homolog At5g06060 [Brachypodium distachyon] >KQK22381.1 hypothetical protein BRADI_1g66900v3 [Brachypodium distachyon]) HSP 1 Score: 231.1 bits (588), Expect = 3.000e-57 Identity = 111/190 (58.42%), Postives = 136/190 (71.58%), Query Frame = 0 Query: 12 SPTRWRLEGKTVFITGGTKGIGKAIVEEFGALGARVFTCARSGPDLVACLKEWTSKGYEVEGMAVDLSDSIARRAVMEQVAGSFVGRLDVLVNNVGTNVRKPTVQYTQEEYHNIMDVNLRSTYHLCQLAHPLLKKGGSSCVVNVGSVAGVTAIKSGSIYAMSKAAMAQLSKNLACEWAPDGIRVNTVAPW 202 S RW L GKT +TGGT+GIG+A+VEE ALGA V TC+R +L LKEW +KG+ V G D+S R ++ VAG F G+LD+LVNNVGTN KPT +Y+ ++Y IM NL S YHLCQLAHPLLK GS+ +V + SV+GV AI SGSIYAM+K AM QL+KNLAC+WA D IR N+VAPW Sbjct: 10 SAARWSLHGKTALVTGGTRGIGRAVVEELAALGAAVHTCSRKESELRERLKEWEAKGFRVTGSVCDVSVRDQRELLLRDVAGRFAGKLDILVNNVGTNFTKPTTEYSADDYSFIMTTNLESAYHLCQLAHPLLKASGSASIVFISSVSGVVAISSGSIYAMTKGAMNQLAKNLACDWAKDNIRTNSVAPW 199
BLAST of NO03G01850 vs. NCBI_GenBank
Match: NP_001149071.1 (uncharacterized protein LOC100282692 [Zea mays] >ACG34080.1 tropinone reductase [Zea mays] >ONL96465.1 Tropinone reductase [Zea mays]) HSP 1 Score: 230.3 bits (586), Expect = 5.200e-57 Identity = 109/196 (55.61%), Postives = 141/196 (71.94%), Query Frame = 0 Query: 6 STSSIGSPTRWRLEGKTVFITGGTKGIGKAIVEEFGALGARVFTCARSGPDLVACLKEWTSKGYEVEGMAVDLSDSIARRAVMEQVAGSFVGRLDVLVNNVGTNVRKPTVQYTQEEYHNIMDVNLRSTYHLCQLAHPLLKKGGSSCVVNVGSVAGVTAIKSGSIYAMSKAAMAQLSKNLACEWAPDGIRVNTVAPW 202 S ++IGS RW L GKT +TGGT+GIG+A+VEE ALGA V TC+R +L +KEW ++G+ V G DLS+ R ++ +VA F G+L++LVNNVGTN+RKPT ++T EEY +M NL S YHLCQ+AHPLLK GS ++ + SVAG I SG+IYAM+K A+ QL+KNLACEWA D IR N+VAPW Sbjct: 7 SGTAIGSSGRWALHGKTALVTGGTRGIGRAVVEELAALGAAVHTCSRKAEELGERIKEWEARGFSVTGSVCDLSERDQRERLLREVADRFGGKLNILVNNVGTNIRKPTTEFTAEEYSFLMATNLESAYHLCQIAHPLLKLSGSGSIIFISSVAGAIGIFSGTIYAMTKGAINQLTKNLACEWAKDNIRANSVAPW 202
BLAST of NO03G01850 vs. NCBI_GenBank
Match: XP_016746349.1 (PREDICTED: tropinone reductase homolog At5g06060-like [Gossypium hirsutum] >PPD95815.1 hypothetical protein GOBAR_DD07154 [Gossypium barbadense]) HSP 1 Score: 230.3 bits (586), Expect = 5.200e-57 Identity = 110/188 (58.51%), Postives = 134/188 (71.28%), Query Frame = 0 Query: 14 TRWRLEGKTVFITGGTKGIGKAIVEEFGALGARVFTCARSGPDLVACLKEWTSKGYEVEGMAVDLSDSIARRAVMEQVAGSFVGRLDVLVNNVGTNVRKPTVQYTQEEYHNIMDVNLRSTYHLCQLAHPLLKKGGSSCVVNVGSVAGVTAIKSGSIYAMSKAAMAQLSKNLACEWAPDGIRVNTVAPW 202 +RW L G T +TGGT+GIG AIVEE LGA V+TC+R+G +L CLKEW SKG+ V G D S R +++ VA F G+L++LVNNVGTN+ KPTV+YT EEY +M N S+YH CQLAHPLLK G +V + SVAG+T + SGSIYA +KAAM QL+KNLACEWA D IR N VAPW Sbjct: 13 SRWFLNGMTALVTGGTRGIGHAIVEELAGLGASVYTCSRNGDELNKCLKEWESKGFLVNGSVCDASSKDQRLKLIDNVASVFNGKLNILVNNVGTNISKPTVEYTAEEYSKLMSTNFDSSYHFCQLAHPLLKASGKGSIVFISSVAGLTHVDSGSIYAPAKAAMNQLTKNLACEWAKDNIRTNCVAPW 200
BLAST of NO03G01850 vs. NCBI_GenBank
Match: OMO76666.1 (Short-chain dehydrogenase/reductase SDR [Corchorus olitorius]) HSP 1 Score: 229.9 bits (585), Expect = 6.800e-57 Identity = 113/201 (56.22%), Postives = 142/201 (70.65%), Query Frame = 0 Query: 1 MATPPSTSSIGSPTRWRLEGKTVFITGGTKGIGKAIVEEFGALGARVFTCARSGPDLVACLKEWTSKGYEVEGMAVDLSDSIARRAVMEQVAGSFVGRLDVLVNNVGTNVRKPTVQYTQEEYHNIMDVNLRSTYHLCQLAHPLLKKGGSSCVVNVGSVAGVTAIKSGSIYAMSKAAMAQLSKNLACEWAPDGIRVNTVAPW 202 MA ++S I +RW LEG T +TGGT+GIG AIVEE LGA V+TC+R+ +L CLKEW KG+ V+G D SD R+ ++E V F G+L++LVNNVGTN+RKPTV+Y+ EEY +M N S YHLCQLAHPLLK G+ +V + SVAG+ I SGSIY +KAA+ QL+KNLACEWA D IR N+VAPW Sbjct: 1 MAETGNSSKI-KTSRWSLEGMTALVTGGTRGIGHAIVEELAGLGAAVYTCSRNEAELGKCLKEWEGKGFVVKGSVCDASDKDQRQKLIENVGSVFNGKLNILVNNVGTNIRKPTVEYSAEEYSKLMTTNYESVYHLCQLAHPLLKASGAGSIVFISSVAGLLHIGSGSIYGPTKAAINQLTKNLACEWAKDNIRTNSVAPW 200 The following BLAST results are available for this feature:
BLAST of NO03G01850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G01850 ID=NO03G01850|Name=NO03G01850|organism=Nannochloropsis oceanica|type=gene|length=1944bpback to top protein sequence of NO03G01850.2 >NO03G01850.2-protein ID=NO03G01850.2-protein|Name=NO03G01850.2|organism=Nannochloropsis oceanica|type=polypeptide|length=202bpback to top protein sequence of NO03G01850.1 >NO03G01850.1-protein ID=NO03G01850.1-protein|Name=NO03G01850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=269bpback to top Synonyms
Publications
|