NO03G01690, NO03G01690 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G01690 vs. NCBI_GenBank
Match: EWM29619.1 (sentrin-specific protease 2 [Nannochloropsis gaditana]) HSP 1 Score: 525.8 bits (1353), Expect = 4.600e-145 Identity = 296/593 (49.92%), Postives = 361/593 (60.88%), Query Frame = 0
Query: 952 SKKGASNGPYQFTEDGLRDVMTRLLSDEVLSDEVLNRALDMLAKQPQSHQLVLFNTFWYEKIKEGKYNDAKAWLARALNGRPAGGLRLICVPINISNAHWVLVFADLERNTVQEWDPASKDSPLDPSRVKNVKDAVEKVLEFEKLNRRPLRVVPAPERLPQQSDVVNCGLFVVLYMIQICFLRK----PPSEEWKAAHEKEGPEGGREERSLMRGALTHSSSSDDASDHPLFGDNRVFPSPSPSTFFVPRATRSHGGLGLPPSRSDRELIPSCMFRVSKEDLFRYRVFLLAWILHSQTSHFAKTDPLLLSFIQEERRELGGEGDGREQQLQQQQDVLPRPLNLVLGGGGSGREXXXXXXXXXXXXXXXIALRDQRKVLNAVVKDTLNSEPMQRKFLEAAMLLLNSFTPGNDGEGGPRVVFVGPEWYRCLVEGRKRAANKIIEALPMGEVEVLVMPLYHPGAGGWVLARVNLMDELKCVYLHGTHALGEAAAILSNVEEGLREIFEGEHKMHWHQRTELLEDVPYAYQVPVALVTLAMHTSRDGXXXXXXXXXXXXXXXXMSGKELRFRFDRQENYFAMKIGVIRWLLRHTDRA 1541
SK G YQFTE+GL+DV+ RLL DE+LSDEVLNRALDM+A P + VL NTFWYEKIKEGKY +AKAWL RAL GR LRL+CVPINI+NAHWVLVFADL RNTVQEWDPAS PLDPSR+KNVKDA+EK FEKL R PL +VPAP LPQQ D VNCG+FVV+Y+IQICF+R+ +W + +GG+ T G V P + + R G G+ + L+P CM RVS+ DL RYR+FLLA ILHSQTSH ++TDP+LLSF+ E+RR+ E D PL G GG GR + QR +L ++ +D N E MQ FL+AAM LLN F+ +DG R+VFV P WY LV G R + I+E L + VEVL +P+YHPGAGGW+LARV+L++E+K +YLHGTHALGEA I VE GL+ + EG HK+HW Q + LE VP+A+QVPVALV L+MH R G S L RFD Q YF+ K+G++RWLLRHT RA
Sbjct: 168 SKIGGKGKHYQFTEEGLQDVILRLLRDEMLSDEVLNRALDMMAHTPVAEAAVLLNTFWYEKIKEGKYVEAKAWLERALGGRSKASLRLVCVPINIANAHWVLVFADLVRNTVQEWDPASATGPLDPSRLKNVKDALEKFFGFEKLKRPPLALVPAPAGLPQQPDAVNCGVFVVIYLIQICFVREFTLILDPNDWPG---RAVQDGGQXXXXXXXXXXTR------------LGGGPVADPP------IAESARQLRGQGIATKLA---LVPPCMLRVSENDLLRYRLFLLALILHSQTSHLSRTDPVLLSFVSEKRRDWRMETDS-----LGAFPPTSTPLRSEHGVGGRGRGESDRKD-----------MEMQRHLLLSLARDKSNDEAMQSLFLQAAMSLLNRFS--SDG----RIVFVSPCWYESLVAGNIRRSIAIMEKLSLANVEVLCLPIYHPGAGGWILARVSLLEEIKSIYLHGTHALGEAEHIFPFVERGLQALLEGHHKLHWRQLAQPLELVPHAHQVPVALVLLSMHILRKGPDARAPSGELTNNWGSSSMPGL--RFDDQHTYFSAKVGILRWLLRHTSRA 712
BLAST of NO03G01690 vs. NCBI_GenBank
Match: XP_008835212.1 (PREDICTED: sentrin-specific protease 2-like [Nannospalax galili]) HSP 1 Score: 67.4 bits (163), Expect = 4.400e-7 Identity = 51/169 (30.18%), Postives = 84/169 (49.70%), Query Frame = 0
Query: 969 RDVMTRLLSDEVLSDEVLNRALDMLAKQPQSH---QLVLFNTFWYEKIKEGKYNDAKAWLARALNGRPAGGLRLICVPINISNAHWVLVFADLERNTVQEWDPASKDSPLDPSRVKNVKDAVEKVLEFEKLNRRPLRVVP--------APERLPQQSDVVNCGLFVVLY 1127
RD+ T L + L+DEV+N +++L ++ QS +L +FNTF+Y K+K G Y+ K W R +N LI VPI+ HW LV DL + ++ D + + +++ + + L+ E RR + + P E +PQQ + +CG+F Y
Sbjct: 209 RDIQT-LEDGQWLNDEVINFYMNLLVERSQSQGYPELHVFNTFFYPKLKYGGYSSVKRW-TRGVN---LFAKELILVPIH-RKVHWSLVVIDLRKKSIVYLDSMGQ-------KGESICKIIFQYLQNESKTRRNIDLNPLEWKQFSMTAEEIPQQMNGSDCGMFTCKY 364
BLAST of NO03G01690 vs. NCBI_GenBank
Match: XP_008820000.1 (PREDICTED: sentrin-specific protease 2-like [Nannospalax galili]) HSP 1 Score: 67.4 bits (163), Expect = 4.400e-7 Identity = 51/169 (30.18%), Postives = 84/169 (49.70%), Query Frame = 0
Query: 969 RDVMTRLLSDEVLSDEVLNRALDMLAKQPQSH---QLVLFNTFWYEKIKEGKYNDAKAWLARALNGRPAGGLRLICVPINISNAHWVLVFADLERNTVQEWDPASKDSPLDPSRVKNVKDAVEKVLEFEKLNRRPLRVVP--------APERLPQQSDVVNCGLFVVLY 1127
RD+ T L + L+DEV+N +++L ++ QS +L +FNTF+Y K+K G Y+ K W R +N LI VPI+ HW LV DL + ++ D + + +++ + + L+ E RR + + P E +PQQ + +CG+F Y
Sbjct: 122 RDIQT-LEDGQWLNDEVINFYMNLLVERSQSQGYPELHVFNTFFYPKLKYGGYSSVKRW-TRGVN---LFAKELILVPIH-RKVHWSLVVIDLRKKSIVYLDSMGQ-------KGESICKIIFQYLQNESKTRRNIDLNPLEWKQFSMTAEEIPQQMNGSDCGMFTCKY 277
BLAST of NO03G01690 vs. NCBI_GenBank
Match: NP_001002834.1 (Sumo1/sentrin/SMT3 specific peptidase 18 [Rattus norvegicus] >CAE51897.1 TPA: sentrin/SUMO-specific protease 18 [Rattus norvegicus]) HSP 1 Score: 66.6 bits (161), Expect = 7.600e-7 Identity = 50/169 (29.59%), Postives = 79/169 (46.75%), Query Frame = 0
Query: 969 RDVMTRLLSDEVLSDEVLNRALDMLAKQ---PQSHQLVLFNTFWYEKIKEGKYNDAKAWLARALNGRPAGGLRLICVPINISNAHWVLVFADLERNTVQEWDPASKDSPLDPSRVKNVKDAVEKVLEFEKLNRRPLRVVP--------APERLPQQSDVVNCGLFVVLY 1127
R M L + + L+DEV+N +++L ++ P L F+TF+Y K+K G YN K W R +N LI VPI+ HW LV DL + ++ D + KN+ + + L+ E RR + + P + +PQQ + +CG+F Y
Sbjct: 285 RGDMQTLKNGQWLNDEVINFYMNLLVQRNENPGYPALHAFSTFFYAKLKHGGYNSVKRW-TRGIN---LFEKELILVPIH-QRVHWSLVVIDLRKRSIVYLDSMGQTG-------KNICETIFHYLQNESKTRRNMELDPVEWKQYSLTSQEIPQQLNGSDCGMFTCKY 441 The following BLAST results are available for this feature:
BLAST of NO03G01690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 4
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G01690 ID=NO03G01690|Name=NO03G01690|organism=Nannochloropsis oceanica|type=gene|length=4809bpback to top protein sequence of NO03G01690.1 >NO03G01690.1-protein ID=NO03G01690.1-protein|Name=NO03G01690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1541bpback to top Synonyms
Publications
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